Citrus Sinensis ID: 037624
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 408 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LP24 | 1120 | Probable leucine-rich rep | yes | no | 0.926 | 0.337 | 0.309 | 1e-37 | |
| Q8VZG8 | 1045 | Probable LRR receptor-lik | no | no | 0.911 | 0.355 | 0.288 | 4e-36 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.921 | 0.341 | 0.259 | 9e-25 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.794 | 0.271 | 0.265 | 2e-24 | |
| Q6XAT2 | 967 | LRR receptor-like serine/ | no | no | 0.938 | 0.396 | 0.245 | 6e-23 | |
| C0LGX3 | 993 | LRR receptor-like serine/ | no | no | 0.786 | 0.323 | 0.279 | 4e-22 | |
| C0LGW6 | 966 | LRR receptor-like serine/ | no | no | 0.919 | 0.388 | 0.261 | 9e-22 | |
| C0LGX1 | 607 | Probable LRR receptor-lik | no | no | 0.906 | 0.609 | 0.260 | 2e-21 | |
| Q0WVM4 | 634 | Probable LRR receptor-lik | no | no | 0.904 | 0.582 | 0.258 | 8e-21 | |
| Q9LJM4 | 991 | Receptor-like protein kin | no | no | 0.948 | 0.390 | 0.247 | 1e-20 |
| >sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 217/468 (46%), Gaps = 90/468 (19%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP S L + LS N GSIP L +LT T L LS+N+L G IPS++ +LQ L
Sbjct: 646 IPQTFDSFLKLHDMNLSRNKFDGSIPR-LSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLD 704
Query: 61 HLDSRHIFIKGTIPYPL-GVLPLSYLDLSFNDLSGGIPKHLT------------------ 101
LD H + G IP G++ L+ +D+S N L G +P T
Sbjct: 705 KLDLSHNNLSGLIPTTFEGMIALTNVDISNNKLEGPLPDTPTFRKATADALEENIGLCSN 764
Query: 102 -TKLRRKVTR-----------LISIVLSINAFLTFLILGILFFLRC-KKNKIITKRNSIR 148
K R K R ++ I++ I L L + F C +K K+ RN+
Sbjct: 765 IPKQRLKPCRELKKPKKNGNLVVWILVPILGVLVILSICANTFTYCIRKRKLQNGRNTDP 824
Query: 149 RDNE-FSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHW 207
E S+++ DG+F + DIIE+T +FD + GTGGY VY A L + +IA+K+LH
Sbjct: 825 ETGENMSIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQDT-IIAVKRLHDT 883
Query: 208 ENEE---PASTRSFQNEVDILYP--KYDIETLLSFMDFVCIKDACFWFMN---------- 252
+EE P + F NEV L ++ L F + +M
Sbjct: 884 IDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLAN 943
Query: 253 -------TW-------RGEACSV-------FCTMIMKPLSWIGL---RELEAFVADFGMT 288
TW +G A ++ ++ + +S + + A ++DFG
Sbjct: 944 DEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTA 1003
Query: 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLS 336
L DSSN + +AGTYGY EKCDVYSFGV+ LE+++G+ PG+L+SSLS
Sbjct: 1004 KLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLS 1063
Query: 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKT 384
SS + + L + D R+ P + + + +V L CL++NP++
Sbjct: 1064 SSPG--EALSLRSISDERVLEPRGQNREKLLKMVEMALL-CLQANPES 1108
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 212/479 (44%), Gaps = 107/479 (22%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP + +L L + LS N+L +IP L +L+ L LS N+L G I S+ +LQ L
Sbjct: 566 IPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLE 625
Query: 61 HLDSRHIFIKGTIPYPL-GVLPLSYLDLSFNDLSGGIPKH-------------------- 99
LD H + G IP +L L+++D+S N+L G IP +
Sbjct: 626 RLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGS 685
Query: 100 -----------LTTKLRRKVTRLISIVLSINAFLTFLIL----GILFFLRCKKNKIITKR 144
+T+ + R + I + + +IL GI R + +I
Sbjct: 686 VNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEEHT 745
Query: 145 NSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKL 204
+S S+++FDG+ + +II+AT +FD KY GTGG+G VY A+L ++ ++A+KKL
Sbjct: 746 DSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKL 804
Query: 205 HHWEN---EEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTW------- 254
+ + P++ + F NE+ L T + + V + C NT+
Sbjct: 805 NETTDSSISNPSTKQEFLNEIRAL-------TEIRHRNVVKLFGFCSHRRNTFLVYEYME 857
Query: 255 RGEACSVFCTMI-MKPLSWIGLR------------------------------------E 277
RG V K L W G R +
Sbjct: 858 RGSLRKVLENDDEAKKLDW-GKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGED 916
Query: 278 LEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMG 325
EA ++DFG L DSSN + +AGTYGY EKCDVYSFGV+ LE++ G
Sbjct: 917 YEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKG 976
Query: 326 RQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKT 384
PG+L+S+L SSS D + L + D RL P + +++ + + CL S+P+
Sbjct: 977 EHPGDLVSTL-SSSPPDATLSLKSISDHRLPEPTPE-IKEEVLEILKVALLCLHSDPQA 1033
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 210/482 (43%), Gaps = 106/482 (21%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS--CTLTLSNNKLSGSIPSEIGNLQEL 59
IP G L L+ L L GN L+ +IP LG+LTS +L +S+N LSG+IP +GNLQ L
Sbjct: 587 IPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQML 646
Query: 60 SHLDSRHIFIKGTIPYPLG-VLPLSYLDLSFNDLSGGIPK-------------------- 98
L + G IP +G ++ L ++S N+L G +P
Sbjct: 647 EILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCN 706
Query: 99 -----------HLTTKL--------RRKVTRLISIVLSINAFLTFLILGILFFLRCKKNK 139
H +KL R+K+ + IV+ +TFL G+ + ++ ++
Sbjct: 707 SQRSHCQPLVPHSDSKLNWLINGSQRQKILTITCIVIGSVFLITFL--GLCWTIKRREPA 764
Query: 140 IITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVI 199
+ + + D S + F + +++AT +F G G G+VY A+++ +VI
Sbjct: 765 FVALEDQTKPDVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSGGEVI 824
Query: 200 ALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDA---CFWFMNT--- 253
A+KKL+ E +S SF+ E+ L K ++ F +++ + +M+
Sbjct: 825 AVKKLNS-RGEGASSDNSFRAEISTL-GKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSL 882
Query: 254 ----WRGE----------------ACSVFCTMIMKPLSWIGLREL-----------EAFV 282
RGE A C + I R++ +A V
Sbjct: 883 GEQLQRGEKNCLLDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHV 942
Query: 283 ADFGMTMHLYCD-SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP- 328
DFG+ + S +++ +AG+YGY EKCD+YSFGVV LE++ G+ P
Sbjct: 943 GDFGLAKLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKPPV 1002
Query: 329 ------GELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNP 382
G+L++ + S + I +++ D RL D+ V ++ LV I C ++P
Sbjct: 1003 QPLEQGGDLVNWVRRSIRN--MIPTIEMFDARLDTN-DKRTVHEMSLVLKIALFCTSNSP 1059
Query: 383 KT 384
+
Sbjct: 1060 AS 1061
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 178/430 (41%), Gaps = 106/430 (24%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
+P +G+L+ L + LS NNL+G + S L + L + NK +G IPSE+GNL +L
Sbjct: 692 VPASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLE 751
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP---------KHLTTKLRRKVTR 110
+LD + G IP + LP L +L+L+ N+L G +P K L + + R
Sbjct: 752 YLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGR 811
Query: 111 LISIVLSINA------------FLTFLILGILFFLRCKK---NKIITKRNSIRRDNEFSV 155
++ I L F I+ +F ++ K + +R+ R E +
Sbjct: 812 VVGSDCKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDPERMEESRL 871
Query: 156 WNF-DGRFVF--------------------------GDIIEATEDFDIKYCFGTGGYGSV 188
F D F GDI+EAT+ F K G GG+G+V
Sbjct: 872 KGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTV 931
Query: 189 YIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL--YPKYDIETLLSFMDFVCIKDA 246
Y A L K +A+KKL + + R F E++ L ++ +LL + F K
Sbjct: 932 YKACLPGEKTVAVKKLSEAKTQ---GNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLL 988
Query: 247 CFWFMNTWRGEACSVFCTMIMKPLSW-------IGLRELEAF------------------ 281
+ +M + T +++ L W +G AF
Sbjct: 989 VYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASN 1048
Query: 282 ----------VADFGMTMHL-YCDSSNLTLLAGTYGY------------EKCDVYSFGVV 318
VADFG+ + C+S T++AGT+GY K DVYSFGV+
Sbjct: 1049 ILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVI 1108
Query: 319 ALEILMGRQP 328
LE++ G++P
Sbjct: 1109 LLELVTGKEP 1118
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Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q6XAT2|ERL2_ARATH LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 215/501 (42%), Gaps = 118/501 (23%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELS 60
IP E+G + NL +L LSGNN +GSIP +LG L L LS N L+G++P+E GNL+ +
Sbjct: 424 IPAELGHIINLDTLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQ 483
Query: 61 HLDSRHIFIKGTIPYPLGVLP-------------------------LSYLDLSFNDLSGG 95
+D F+ G IP LG L L+ L++SFN+LSG
Sbjct: 484 IIDVSFNFLAGVIPTELGQLQNINSLILNNNKIHGKIPDQLTNCFSLANLNISFNNLSGI 543
Query: 96 IP--KHLT------------------------TKLRRKVTRLISIVLSINAFLTFLILGI 129
IP K+ T + + +V ++++ + F+T + +
Sbjct: 544 IPPMKNFTRFSPASFFGNPFLCGNWVGSICGPSLPKSQVFTRVAVICMVLGFITLICMIF 603
Query: 130 LFFLRCKKNKIITKRNSIRRDN--EFSVWNFD-GRFVFGDIIEATEDFDIKYCFGTGGYG 186
+ + K+ K + K +S + + + + + D F DI+ TE+ D KY G G
Sbjct: 604 IAVYKSKQQKPVLKGSSKQPEGSTKLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASS 663
Query: 187 SVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL----------YPKYDIETLLS 236
+VY +S+ IA+K+++ N+ P++ R F+ E++ + Y + +
Sbjct: 664 TVYKCTSKTSRPIAIKRIY---NQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGN 720
Query: 237 FMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPL--SWIGLREL---------------- 278
+ + +++ W + G+ + +K + GL L
Sbjct: 721 LLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSS 780
Query: 279 --------EAFVADFGMTMHLYCDSSNL-TLLAGTYGY------------EKCDVYSFGV 317
EA ++DFG+ + + T + GT GY EK D+YSFG+
Sbjct: 781 NILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGI 840
Query: 318 VALEILMGRQPGELLSSLSS---SSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTIL 374
V LE+L G++ + ++L S + D +M + +D +S V M I +
Sbjct: 841 VLLELLTGKKAVDNEANLHQMILSKADDNTVM--EAVDAEVS--VTCMDSGHIKKTFQLA 896
Query: 375 FACLRSNPKTPMQKP-FHEIS 394
C + N P+++P E+S
Sbjct: 897 LLCTKRN---PLERPTMQEVS 914
|
Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ERL1 and ER. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGX3|HSL2_ARATH LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 176/411 (42%), Gaps = 90/411 (21%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP I L+NL + + N L G IPSS+ T T L LSNN+L G IP E+G+L L
Sbjct: 498 SIPSCINKLKNLERVEMQENMLDGEIPSSVSSCTELTELNLSNNRLRGGIPPELGDLPVL 557
Query: 60 SHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR------------- 106
++LD + + G IP L L L+ ++S N L G IP + R
Sbjct: 558 NYLDLSNNQLTGEIPAELLRLKLNQFNVSDNKLYGKIPSGFQQDIFRPSFLGNPNLCAPN 617
Query: 107 -------KVTRLISIVLSINAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNFD 159
+ R +L I+ + G L +L K + ++ +R N+ +++
Sbjct: 618 LDPIRPCRSKRETRYILPISILCIVALTGALVWLFIKTKPLFKRK--PKRTNKITIFQRV 675
Query: 160 GRFVFGDII-EATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSF 218
G F DI + TED I G+GG G VY +L S + +A+KKL ++ S F
Sbjct: 676 G-FTEEDIYPQLTEDNII----GSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVF 730
Query: 219 QNEVDIL--YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCT----MIMKPLSW 272
++EV+ L +I LL + + + FM G V + + PL W
Sbjct: 731 RSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMEN--GSLGDVLHSEKEHRAVSPLDW 788
Query: 273 I-----------GL------------------------RELEAFVADFGMTMHLYCDSSN 297
GL E++ VADFG+ L + ++
Sbjct: 789 TTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDND 848
Query: 298 ------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330
++ +AG+YGY EK DVYSFGVV LE++ G++P +
Sbjct: 849 GVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPND 899
|
Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 214/497 (43%), Gaps = 122/497 (24%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELS 60
IP+E+G + NL L LSGNN +GSIP +LG L L LS N LSG +P+E GNL+ +
Sbjct: 422 IPVELGHIINLDKLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQ 481
Query: 61 HLDSRHIFIKGTIPYPLG-------------------------VLPLSYLDLSFNDLSGG 95
+D + G IP LG L L++SFN+LSG
Sbjct: 482 MIDVSFNLLSGVIPTELGQLQNLNSLILNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGI 541
Query: 96 IP--KHLTT------------------------KLRRKVTR--LISIVLSINAFLTFLIL 127
+P K+ + R +R LI IVL + L + L
Sbjct: 542 VPPMKNFSRFAPASFVGNPYLCGNWVGSICGPLPKSRVFSRGALICIVLGVITLLCMIFL 601
Query: 128 GILFFLRCKKNKIITKRNSIRRDN--EFSVWNFD-GRFVFGDIIEATEDFDIKYCFGTGG 184
+ ++ KK I + +S + + + + + D F DI+ TE+ + K+ G G
Sbjct: 602 AVYKSMQQKK---ILQGSSKQAEGLTKLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGA 658
Query: 185 YGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL----------YPKYDIETL 234
+VY L SS+ IA+K+L+ N+ P + R F+ E++ + Y +
Sbjct: 659 SSTVYKCALKSSRPIAIKRLY---NQYPHNLREFETELETIGSIRHRNIVSLHGYALSPT 715
Query: 235 LSFMDFVCIKDACFWFM---------NTWR-------GEACSVF-----CT--MIMKPL- 270
+ + + +++ W + W G A + CT +I + +
Sbjct: 716 GNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIK 775
Query: 271 -SWIGLRE-LEAFVADFGMTMHLYCDSSNL-TLLAGTYGY------------EKCDVYSF 315
S I L E EA ++DFG+ + ++ T + GT GY EK D+YSF
Sbjct: 776 SSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSF 835
Query: 316 GVVALEILMGRQPGELLSSLSS---SSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVST 372
G+V LE+L G++ + ++L S + D +M + +DP ++ V M + I
Sbjct: 836 GIVLLELLTGKKAVDNEANLHQLILSKADDNTVM--EAVDPEVT--VTCMDLGHIRKTFQ 891
Query: 373 ILFACLRSNPKTPMQKP 389
+ C + N P+++P
Sbjct: 892 LALLCTKRN---PLERP 905
|
Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGX1|Y5524_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g65240 OS=Arabidopsis thaliana GN=At5g65240 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 195/464 (42%), Gaps = 94/464 (20%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP IG+L +L SL L N+LT IPS+LG L + LTLS N L+GSIP + L +L
Sbjct: 104 IPESIGNLSSLTSLDLEDNHLTDRIPSTLGNLKNLQFLTLSRNNLNGSIPDSLTGLSKLI 163
Query: 61 H--LDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLS--GGIPKHLTTK---LRRKVTRLIS 113
+ LDS + + G IP L +P + + N+LS G P+ T+ +R
Sbjct: 164 NILLDSNN--LSGEIPQSLFKIP--KYNFTANNLSCGGTFPQPCVTESSPSGDSSSRKTG 219
Query: 114 IVLSINAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSV-WNFDGRFVFGDIIE--- 169
I+ + + + ++LG FF CK K +RD V D R FG +
Sbjct: 220 IIAGVVSGIAVILLGFFFFFFCKD-----KHKGYKRDVFVDVAGEVDRRIAFGQLRRFAW 274
Query: 170 -----ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDI 224
AT++F K G GG+G VY L+ +A+K+L +E P +FQ EV++
Sbjct: 275 RELQLATDEFSEKNVLGQGGFGKVYKGLLSDGTKVAVKRLTDFER--PGGDEAFQREVEM 332
Query: 225 LYPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKP----LSWIGLREL-- 278
+ LL + F C + + +C +KP L W +++
Sbjct: 333 ISVAVH-RNLLRLIGF-CTTQTERLLVYPFMQNLSVAYCLREIKPGDPVLDWFRRKQIAL 390
Query: 279 ---------------------------------EAFVADFGMTMHLYCDSSNLTL-LAGT 304
EA V DFG+ + +N+T + GT
Sbjct: 391 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGT 450
Query: 305 YGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL- 351
G+ EK DV+ +G++ LE++ G++ + S + +++LLD +
Sbjct: 451 MGHIAPECISTGKSSEKTDVFGYGIMLLELVTGQRAIDF-----SRLEEEDDVLLLDHVK 505
Query: 352 ----DPRLSPPVDRMVVRDIVL--VSTILFACLRSNPKTPMQKP 389
+ RL VD+ + D + V ++ L P ++P
Sbjct: 506 KLEREKRLEDIVDKKLDEDYIKEEVEMMIQVALLCTQAAPEERP 549
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q0WVM4|Y2239_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 192/461 (41%), Gaps = 92/461 (19%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQEL 59
T+ IG+L NL + L NN++G IP + L TL LSNN+ SG IP + L L
Sbjct: 89 TLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNL 148
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKH------------------- 99
+L + + G P L +P LS+LDLS+N+L G +PK
Sbjct: 149 QYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVPKFPARTFNVAGNPLICKNSLP 208
Query: 100 -----------LTTKLRR---KVTRLISIVLSIN-AFLTFLILGILF-FLRCKKNKIITK 143
L+ LR + T ++++ L ++ F +IL + F + R K+ ++
Sbjct: 209 EICSGSISASPLSVSLRSSSGRRTNILAVALGVSLGFAVSVILSLGFIWYRKKQRRLTML 268
Query: 144 RNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKK 203
R S +++ F F ++ AT+ F K G GG+G+VY + V+A+K+
Sbjct: 269 RISDKQEEGLLGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKR 328
Query: 204 LHHWENEEPASTRSFQNEVDIL-------------YPKYDIETLL--------SFMDFVC 242
L S F+ E++++ Y E LL S +
Sbjct: 329 LKDVNGTSGNS--QFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLK 386
Query: 243 IKDACFW------FMNTWRG-----EACSVFCTMIMKPLSWIGLRE-LEAFVADFGMTMH 290
K A W + RG E C + I L E EA V DFG+
Sbjct: 387 AKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKL 446
Query: 291 L-YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSS 337
L + DS T + GT G+ EK DV+ FG++ LE++ G + E S+S
Sbjct: 447 LNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQ 506
Query: 338 SSSS-------DQNIMLLDVLDPRLSPPVDRMVVRDIVLVS 371
+ + + + +++D L DR+ V +++ V+
Sbjct: 507 KGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVA 547
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LJM4|IKU2_ARATH Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 203/506 (40%), Gaps = 119/506 (23%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
+P G L+ L SL L NNL+G+IP SLG TS L + N LS IP +G+L+ L+
Sbjct: 476 VPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLGSLKLLN 535
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHL------------TTKLR--- 105
L+ + G IP L L LS LDLS N L+G +P+ L ++K+R
Sbjct: 536 SLNLSGNKLSGMIPVGLSALKLSLLDLSNNQLTGSVPESLVSGSFEGNSGLCSSKIRYLR 595
Query: 106 ------------RKVTRLISIVLSINAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEF 153
RK + + + A L L + +++K+ ++++ N++
Sbjct: 596 PCPLGKPHSQGKRKHLSKVDMCFIVAAILALFFLFSYVIFKIRRDKL---NKTVQKKNDW 652
Query: 154 SVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHW------ 207
V +F R + + +E ++ + G GG G+VY L S + +A+K H W
Sbjct: 653 QVSSF--RLLNFNEMEIIDEIKSENIIGRGGQGNVYKVSLRSGETLAVK--HIWCPESSH 708
Query: 208 -----------ENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVC----------IKDA 246
+ ++ F+ EV L I + F C + +
Sbjct: 709 ESFRSSTAMLSDGNNRSNNGEFEAEVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNG 768
Query: 247 CFW-FMNTWRGE------ACSVFCTMIMKPLSWI--GL-----------------RELEA 280
W ++ RGE K L ++ GL E
Sbjct: 769 SLWEQLHERRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRP 828
Query: 281 FVADFGMTMHLYCDSS----NLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+ADFG+ + DS + L+ GT GY EK DVYSFGVV +E++
Sbjct: 829 RIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVT 888
Query: 325 GRQP--------GELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFA 376
G++P +++ + S S M++ ++D ++ D + V TI
Sbjct: 889 GKKPLETDFGENNDIVMWVWSVSKETNREMMMKLID----TSIEDEYKEDALKVLTIALL 944
Query: 377 CLRSNPKTPMQKPFHEISISELRNQE 402
C K+P +PF + +S L E
Sbjct: 945 C---TDKSPQARPFMKSVVSMLEKIE 967
|
Modulates the seed size by negatively regulating the cellularization of syncytial endosperm. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 408 | ||||||
| 296085303 | 789 | unnamed protein product [Vitis vinifera] | 0.973 | 0.503 | 0.393 | 4e-78 | |
| 359484066 | 843 | PREDICTED: probable LRR receptor-like se | 0.973 | 0.470 | 0.393 | 4e-78 | |
| 359484068 | 868 | PREDICTED: probable leucine-rich repeat | 0.970 | 0.456 | 0.389 | 5e-75 | |
| 296085307 | 874 | unnamed protein product [Vitis vinifera] | 0.970 | 0.453 | 0.389 | 5e-75 | |
| 225465647 | 820 | PREDICTED: probable LRR receptor-like se | 0.960 | 0.478 | 0.392 | 1e-73 | |
| 296085298 | 610 | unnamed protein product [Vitis vinifera] | 0.941 | 0.629 | 0.406 | 2e-73 | |
| 359488981 | 757 | PREDICTED: probable LRR receptor-like se | 0.924 | 0.498 | 0.378 | 2e-73 | |
| 359488983 | 758 | PREDICTED: probable LRR receptor-like se | 0.924 | 0.497 | 0.373 | 1e-72 | |
| 296082882 | 633 | unnamed protein product [Vitis vinifera] | 0.970 | 0.625 | 0.392 | 2e-72 | |
| 296082878 | 1699 | unnamed protein product [Vitis vinifera] | 0.879 | 0.211 | 0.400 | 8e-71 |
| >gi|296085303|emb|CBI29035.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 261/518 (50%), Gaps = 121/518 (23%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP I +L+NL+ L L NNLTG IPSSLG L +S N+++G IPS IGNL L
Sbjct: 278 SIPPIIWNLKNLIHLRLDHNNLTGVIPSSLGYLIHLNEFNISGNRINGHIPSTIGNLNNL 337
Query: 60 SHLDSRHIFIKGTIPYP------LGVLPLSY-------------------LDLSFNDLSG 94
+ LD I G IP L L LS+ LDLS NDL G
Sbjct: 338 TRLDLSANLIHGKIPSQVQNLKRLTYLNLSHNKLSGSIPTLLIYDHIKPSLDLSHNDLEG 397
Query: 95 GIPKHLTTKLRR-----------------------KVTRLISIVLSINAFLTFLILGILF 131
IP L +K + K TR+I I LS FL F++LG L
Sbjct: 398 HIPFELQSKFSQGSFDNNKGLCGDIKGLPHCKEEYKTTRIIVISLSTTLFLFFVVLGFLL 457
Query: 132 FLRCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIA 191
R K KI TK + + FSVWN+DG+ + DII+ATEDFDIKYC GTGGYGSVY A
Sbjct: 458 LSR-KTRKIQTKEIPTKNGDIFSVWNYDGKIAYEDIIKATEDFDIKYCIGTGGYGSVYKA 516
Query: 192 QLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFM 251
QL + V+ALKKLH WE +E +SFQNEV IL K ++ + C+ C + +
Sbjct: 517 QLPTGNVVALKKLHGWERDEAIYLKSFQNEVQIL-SKIRHRNIVKLQGY-CLHKRCMFLI 574
Query: 252 NTWRGEACSVFCTMIMK----PLSWIGL-------------------------------- 275
+ G S++C + + L WI
Sbjct: 575 YNYMGRG-SLYCVLSNEVEALELDWIKRVNVVKSIVHAVCYMHHDCTPPIIHRDISSNNI 633
Query: 276 ---RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVAL 320
+L+AF++DFG L+ DSSN TLLAGTYGY EKCDVYSFGVVAL
Sbjct: 634 LLDSKLDAFLSDFGTARLLHPDSSNQTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVAL 693
Query: 321 EILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRS 380
E +MG+ PGEL + LSSSS+ QNIML ++LD RL P D+ V RD+VLV + C+ S
Sbjct: 694 ETMMGKHPGELFTLLSSSST--QNIMLTNILDSRLPSPQDQQVARDVVLVVWLALKCIHS 751
Query: 381 NPK---------------TPMQKPFHEISISELRNQEM 403
NP+ +P PF+ IS+ +L E+
Sbjct: 752 NPRSRPTMQHILSKLLTQSPFLGPFNWISLCQLTALEI 789
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484066|ref|XP_002271307.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 261/518 (50%), Gaps = 121/518 (23%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP I +L+NL+ L L NNLTG IPSSLG L +S N+++G IPS IGNL L
Sbjct: 332 SIPPIIWNLKNLIHLRLDHNNLTGVIPSSLGYLIHLNEFNISGNRINGHIPSTIGNLNNL 391
Query: 60 SHLDSRHIFIKGTIPYP------LGVLPLSY-------------------LDLSFNDLSG 94
+ LD I G IP L L LS+ LDLS NDL G
Sbjct: 392 TRLDLSANLIHGKIPSQVQNLKRLTYLNLSHNKLSGSIPTLLIYDHIKPSLDLSHNDLEG 451
Query: 95 GIPKHLTTKLRR-----------------------KVTRLISIVLSINAFLTFLILGILF 131
IP L +K + K TR+I I LS FL F++LG L
Sbjct: 452 HIPFELQSKFSQGSFDNNKGLCGDIKGLPHCKEEYKTTRIIVISLSTTLFLFFVVLGFLL 511
Query: 132 FLRCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIA 191
R K KI TK + + FSVWN+DG+ + DII+ATEDFDIKYC GTGGYGSVY A
Sbjct: 512 LSR-KTRKIQTKEIPTKNGDIFSVWNYDGKIAYEDIIKATEDFDIKYCIGTGGYGSVYKA 570
Query: 192 QLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFM 251
QL + V+ALKKLH WE +E +SFQNEV IL K ++ + C+ C + +
Sbjct: 571 QLPTGNVVALKKLHGWERDEAIYLKSFQNEVQIL-SKIRHRNIVKLQGY-CLHKRCMFLI 628
Query: 252 NTWRGEACSVFCTMIMK----PLSWIGL-------------------------------- 275
+ G S++C + + L WI
Sbjct: 629 YNYMGRG-SLYCVLSNEVEALELDWIKRVNVVKSIVHAVCYMHHDCTPPIIHRDISSNNI 687
Query: 276 ---RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVAL 320
+L+AF++DFG L+ DSSN TLLAGTYGY EKCDVYSFGVVAL
Sbjct: 688 LLDSKLDAFLSDFGTARLLHPDSSNQTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVAL 747
Query: 321 EILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRS 380
E +MG+ PGEL + LSSSS+ QNIML ++LD RL P D+ V RD+VLV + C+ S
Sbjct: 748 ETMMGKHPGELFTLLSSSST--QNIMLTNILDSRLPSPQDQQVARDVVLVVWLALKCIHS 805
Query: 381 NPK---------------TPMQKPFHEISISELRNQEM 403
NP+ +P PF+ IS+ +L E+
Sbjct: 806 NPRSRPTMQHILSKLLTQSPFLGPFNWISLCQLTALEI 843
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484068|ref|XP_002271708.2| PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 201/516 (38%), Positives = 259/516 (50%), Gaps = 120/516 (23%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTL-TLSNNKLSGSIPSEIGNLQEL 59
+IP I +L+NL+ L L NNLTG IPS LG L + + N++ G IPS+IGNL L
Sbjct: 360 SIPPVIWNLKNLIHLRLDHNNLTGVIPS-LGYLIHLNVFNIRRNRIRGHIPSKIGNLNNL 418
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPK-------------------- 98
+ LD I G IP L L L L+LS N LSG IP
Sbjct: 419 TSLDLSDNLIDGKIPSQLQNLKSLESLNLSHNKLSGHIPPLSIYIHKGSSIDFSHNDFEG 478
Query: 99 HLTTKL-------------------------RRKVTRLISIVLSINAFLTFLILGILFFL 133
H+ +L +R ++ I LS FL+F+ LGIL
Sbjct: 479 HIPHELQFVYPPRVFGHNKGLCGEREGLPHCKRGHKTILIISLSTILFLSFVALGILLLS 538
Query: 134 RCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL 193
R K + TK S + + FSVWN+DG+ + DIIEATEDFDIKYC GTGGYGSVY AQL
Sbjct: 539 R-KTRRNQTKATSTKNGDIFSVWNYDGKIAYEDIIEATEDFDIKYCIGTGGYGSVYKAQL 597
Query: 194 TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNT 253
+ V+ALKKLH WE +E +SFQNEV +L K ++ + C+ C + +
Sbjct: 598 PTGNVVALKKLHGWERDEATYLKSFQNEVQVL-SKIQHRNIIKLHGY-CLHKRCMFLIYK 655
Query: 254 WRGEACSVFCTMIMK----PLSWIGLR--------------------------------- 276
+ E S++C + + L WI
Sbjct: 656 YM-ERGSLYCVLSNEVEALELDWIKRVNVIKSIVHALCYMHHDSTPPIIHRDVSSNNILL 714
Query: 277 --ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEI 322
+L+AF++DFG L+ DSSN TLLAGTYGY EKCDVYSFGVVALE
Sbjct: 715 DFKLDAFLSDFGTARLLHPDSSNQTLLAGTYGYIAPELAYTMAVTEKCDVYSFGVVALET 774
Query: 323 LMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNP 382
+MGR P EL + LSSSS+ QNIML D+LD RL P DR V RD+VLV + C+ SNP
Sbjct: 775 MMGRHPRELFTLLSSSSA--QNIMLTDILDSRLPSPQDRQVARDVVLVVWLALKCIHSNP 832
Query: 383 K---------------TPMQKPFHEISISELRNQEM 403
+ +P +PFH IS+ +L QE+
Sbjct: 833 RSRPTMQHISSKLLIQSPFLEPFHGISLWQLNIQEI 868
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296085307|emb|CBI29039.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 201/516 (38%), Positives = 259/516 (50%), Gaps = 120/516 (23%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTL-TLSNNKLSGSIPSEIGNLQEL 59
+IP I +L+NL+ L L NNLTG IPS LG L + + N++ G IPS+IGNL L
Sbjct: 366 SIPPVIWNLKNLIHLRLDHNNLTGVIPS-LGYLIHLNVFNIRRNRIRGHIPSKIGNLNNL 424
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPK-------------------- 98
+ LD I G IP L L L L+LS N LSG IP
Sbjct: 425 TSLDLSDNLIDGKIPSQLQNLKSLESLNLSHNKLSGHIPPLSIYIHKGSSIDFSHNDFEG 484
Query: 99 HLTTKL-------------------------RRKVTRLISIVLSINAFLTFLILGILFFL 133
H+ +L +R ++ I LS FL+F+ LGIL
Sbjct: 485 HIPHELQFVYPPRVFGHNKGLCGEREGLPHCKRGHKTILIISLSTILFLSFVALGILLLS 544
Query: 134 RCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL 193
R K + TK S + + FSVWN+DG+ + DIIEATEDFDIKYC GTGGYGSVY AQL
Sbjct: 545 R-KTRRNQTKATSTKNGDIFSVWNYDGKIAYEDIIEATEDFDIKYCIGTGGYGSVYKAQL 603
Query: 194 TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNT 253
+ V+ALKKLH WE +E +SFQNEV +L K ++ + C+ C + +
Sbjct: 604 PTGNVVALKKLHGWERDEATYLKSFQNEVQVL-SKIQHRNIIKLHGY-CLHKRCMFLIYK 661
Query: 254 WRGEACSVFCTMIMK----PLSWIGLR--------------------------------- 276
+ E S++C + + L WI
Sbjct: 662 YM-ERGSLYCVLSNEVEALELDWIKRVNVIKSIVHALCYMHHDSTPPIIHRDVSSNNILL 720
Query: 277 --ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEI 322
+L+AF++DFG L+ DSSN TLLAGTYGY EKCDVYSFGVVALE
Sbjct: 721 DFKLDAFLSDFGTARLLHPDSSNQTLLAGTYGYIAPELAYTMAVTEKCDVYSFGVVALET 780
Query: 323 LMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNP 382
+MGR P EL + LSSSS+ QNIML D+LD RL P DR V RD+VLV + C+ SNP
Sbjct: 781 MMGRHPRELFTLLSSSSA--QNIMLTDILDSRLPSPQDRQVARDVVLVVWLALKCIHSNP 838
Query: 383 K---------------TPMQKPFHEISISELRNQEM 403
+ +P +PFH IS+ +L QE+
Sbjct: 839 RSRPTMQHISSKLLIQSPFLEPFHGISLWQLNIQEI 874
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465647|ref|XP_002270862.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 196/500 (39%), Positives = 255/500 (51%), Gaps = 108/500 (21%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQEL 59
+IP I +L+NL+ L L NNLTG IPSSLG L +S N++SG IPS IGNL L
Sbjct: 332 SIPPIIWNLKNLIHLRLDHNNLTGVIPSSLGYLIHLHEFNISGNQISGQIPSSIGNLNNL 391
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPK-------------------- 98
+ LD I G IP + L L YL+LS N LSG IP
Sbjct: 392 TRLDLSDNLIHGKIPSQVQNLKRLVYLNLSHNKLSGSIPTLLIYDHIRPSLDLSYNDLEG 451
Query: 99 HLTTKLRRKVTRLISIVLSINAFLTFLILGILFFLRCKKN---------KIITKRNSIRR 149
H+ +L+ K ++ N L I G+ CK+ KI TK +
Sbjct: 452 HIPFELQSKFSQ---GSFDNNKGLCGDIKGLP---HCKEEYKTTRIITRKIQTKEIPTKN 505
Query: 150 DNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWEN 209
+ FSVWN+DG+ + DII+ATEDFDIKYC GTGGYGSVY AQL + V+ALKKLH WE
Sbjct: 506 GDIFSVWNYDGKIAYEDIIKATEDFDIKYCIGTGGYGSVYKAQLPTGNVVALKKLHGWET 565
Query: 210 EEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMK- 268
+E +SFQNEV IL K ++ + C+ C + + + G S++C + +
Sbjct: 566 DEATYLKSFQNEVQIL-SKIRHRNIVKLQGY-CLHKRCMFLIYNYMGRG-SLYCVLSNEV 622
Query: 269 ---PLSWIGL-----------------------------------RELEAFVADFGMTMH 290
L WI +L+AF++DFG +
Sbjct: 623 EALELDWIKRVNVVKSIVHAVCYMHHDCTPPIIHRDISSNNILLDSKLDAFLSDFGTSRL 682
Query: 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS 338
L+ DSSN TLL+GTYGY EKCDVYSFGVVALE +MG+ PGEL + LSSS
Sbjct: 683 LHPDSSNQTLLSGTYGYIAPELAYTMVVTEKCDVYSFGVVALETMMGKHPGELFTLLSSS 742
Query: 339 SSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK--------------- 383
S+ QNIML D+LD RL P D+ V RD+VLV + C+ SNP+
Sbjct: 743 ST--QNIMLTDMLDSRLPSPQDQQVARDVVLVVWLALKCIHSNPRSRPTMQHISSKLLTQ 800
Query: 384 TPMQKPFHEISISELRNQEM 403
+P PFH IS+ +L E+
Sbjct: 801 SPFLGPFHGISLWQLNALEI 820
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296085298|emb|CBI29030.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/472 (40%), Positives = 251/472 (53%), Gaps = 88/472 (18%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP +IG+L+NL LYL N+L+G IPS L L++ L L+ N+++GSIPSEIGNL+ L
Sbjct: 158 SIPSQIGNLKNLTHLYLVSNSLSGVIPSPLANLSNLEYLFLNFNRINGSIPSEIGNLKNL 217
Query: 60 SHL-DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L D I G IP + L L YL+LS N LSG IP L R S+ LS
Sbjct: 218 VQLLDLSDNLIHGKIPSQVQNLKRLVYLNLSHNKLSGSIPTLLIYDHIRP-----SLDLS 272
Query: 118 INAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIK 177
N I F L+ K + S + VWN+DG+ + DII+ATEDFDIK
Sbjct: 273 YNDLEGH----IPFELQSK-----FSQGSFDNNKGLCVWNYDGKIAYEDIIKATEDFDIK 323
Query: 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSF 237
YC GTGGYGSVY AQL + V+ALKKLH WE +E +SFQNEV IL K ++
Sbjct: 324 YCIGTGGYGSVYKAQLPTGNVVALKKLHGWETDEATYLKSFQNEVQIL-SKIRHRNIVKL 382
Query: 238 MDFVCIKDACFWFMNTWRGEACSVFCTMIMK----PLSWIGL------------------ 275
+ C+ C + + + G S++C + + L WI
Sbjct: 383 QGY-CLHKRCMFLIYNYMGRG-SLYCVLSNEVEALELDWIKRVNVVKSIVHAVCYMHHDC 440
Query: 276 -----------------RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+L+AF++DFG + L+ DSSN TLL+GTYGY
Sbjct: 441 TPPIIHRDISSNNILLDSKLDAFLSDFGTSRLLHPDSSNQTLLSGTYGYIAPELAYTMVV 500
Query: 308 -EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366
EKCDVYSFGVVALE +MG+ PGEL + LSSSS+ QNIML D+LD RL P D+ V RD
Sbjct: 501 TEKCDVYSFGVVALETMMGKHPGELFTLLSSSST--QNIMLTDMLDSRLPSPQDQQVARD 558
Query: 367 IVLVSTILFACLRSNPK---------------TPMQKPFHEISISELRNQEM 403
+VLV + C+ SNP+ +P PFH IS+ +L E+
Sbjct: 559 VVLVVWLALKCIHSNPRSRPTMQHISSKLLTQSPFLGPFHGISLWQLNALEI 610
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488981|ref|XP_002275364.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 189/500 (37%), Positives = 248/500 (49%), Gaps = 123/500 (24%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT------------------------ 37
IP EIG ++NL L L NNLTG IPSS G LT+
Sbjct: 228 IPPEIGKMKNLNKLNLGYNNLTGVIPSSFGNLTNMNSLSFRGNQISGFIPPEIGHLLNLS 287
Query: 38 -LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGG 95
L LS N++SG IP E+ NL++LSHLD + I G IP LG L + Y +LS N+LSG
Sbjct: 288 YLDLSENQISGFIPEEMVNLKKLSHLDMSNNLISGKIPSQLGNLKEVKYFNLSHNNLSGT 347
Query: 96 IPKHLTT-----------------------------------------KLRRKVTRLISI 114
IP +++ K R ++T +I +
Sbjct: 348 IPYSISSNYRWTLIDLSNNRLEGQARAPVEAFGHNKGLCGEIKGWARCKKRHQITLIIVV 407
Query: 115 VLSINAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDF 174
LS L+ ILG LF R + + + ++ + FS+W+FDG + DII+ATEDF
Sbjct: 408 SLSTTLLLSVAILGFLFHKRRIRKNQLLETTKVKNGDLFSIWDFDGVIAYQDIIQATEDF 467
Query: 175 DIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETL 234
DIKYC GTGGYGSVY AQL S KV+ALKKLH WE E+P +SF+NEV +L + +
Sbjct: 468 DIKYCIGTGGYGSVYRAQLPSGKVVALKKLHGWEREDPTYLKSFENEVQML-TRIRHRNI 526
Query: 235 LSFMDFVCIKDACFWFMNTWRGEACSVFCTM--------------------IMKPLSWIG 274
+ F C+ C + + + E S++C + I LS++
Sbjct: 527 VKLHGF-CLHKRCMFLVYKYM-EKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALSYMH 584
Query: 275 L-------------------RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------- 307
+LEAFV+DFG L DSSN TLLAGTYGY
Sbjct: 585 HDCDLPIIHRDISSNNILLDSKLEAFVSDFGTARLLDNDSSNRTLLAGTYGYIAPELAYT 644
Query: 308 ----EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363
EKCDVYSFG+VALE +MG PGE ++SLSSSS+ QN L DVLD RLS P V
Sbjct: 645 MVVTEKCDVYSFGMVALETMMGMHPGEFITSLSSSST--QNTTLKDVLDSRLSSPKSTRV 702
Query: 364 VRDIVLVSTILFACLRSNPK 383
+I L+ ++ CL NP+
Sbjct: 703 ANNIALIVSLALKCLHFNPQ 722
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488983|ref|XP_002277433.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 247/501 (49%), Gaps = 124/501 (24%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT------------------------ 37
IP EIG ++NL L L NNLTG IPSS G LT+
Sbjct: 228 IPPEIGGMKNLNKLNLGYNNLTGVIPSSFGNLTNMNSLSFRGNQISGFIPLEIWYLLNLS 287
Query: 38 -LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGG 95
L LS N++SG IP EI NL++LSHLD + I G IP LG L + Y +LS N+LSG
Sbjct: 288 YLDLSENQISGFIPEEIVNLKKLSHLDMSNNLISGKIPSQLGNLKEVKYFNLSHNNLSGT 347
Query: 96 IPKHLTT------------------------------------------KLRRKVTRLIS 113
IP +++ K R ++T +I
Sbjct: 348 IPYSISSNYNKWTLIDLSNNRLEGQTRAPVEAFGHNKGLCGEIKGRPRCKKRHQITLIIV 407
Query: 114 IVLSINAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATED 173
+ LS L+ ILG LF R + + + ++ + FS+W++DG + DII+ATED
Sbjct: 408 VSLSTTLLLSIAILGFLFHKRRIRKNQLLETTKVKNGDLFSIWDYDGVIAYQDIIQATED 467
Query: 174 FDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIET 233
FDIKYC GTGGYGSVY AQL S KV+ALKKLH WE +P +SF+NEV +L +
Sbjct: 468 FDIKYCIGTGGYGSVYRAQLPSGKVVALKKLHGWERGDPTYLKSFENEVQML-TRIRHRN 526
Query: 234 LLSFMDFVCIKDACFWFMNTWRGEACSVFCTM--------------------IMKPLSWI 273
++ F C+ C + + + E S++C + I LS++
Sbjct: 527 IVKLHGF-CLHKRCMFLVYKYM-EKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALSYM 584
Query: 274 GL-------------------RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------- 307
+LEAFV+DFG L DSSN TLL GTYGY
Sbjct: 585 HHDCDLPIIHRDISSNNILLDSKLEAFVSDFGTARLLDNDSSNRTLLVGTYGYIAPELAY 644
Query: 308 -----EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362
EKCD+YSFG+VALE +MG PGE ++SLSSSS+ QN L DVLD RLS P
Sbjct: 645 TMVVTEKCDIYSFGMVALETMMGMHPGEFVTSLSSSST--QNTTLKDVLDSRLSSPKSTQ 702
Query: 363 VVRDIVLVSTILFACLRSNPK 383
V +I L+ ++ CL SNP+
Sbjct: 703 VANNIALIVSLALKCLHSNPQ 723
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082882|emb|CBI22183.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 252/497 (50%), Gaps = 101/497 (20%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
+IPLEIG+L NL+ L L+ NNLTG G + L+LS NK+S IP E+GN L
Sbjct: 118 SIPLEIGNLENLIYLLLNDNNLTGLSHGIGGLINLIYLSLSRNKISQPIPEELGNCSSLQ 177
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIP---------------KHLTTKLR 105
HLD + + G IP +G L L +DLS N+L G IP K L ++R
Sbjct: 178 HLDLSNNYFTGDIPIQIGDLALHRIDLS-NNLLGHIPFELQNASQPGAFDHNKGLCGEIR 236
Query: 106 --------RKVTRLISIVLSINAFLTFLILGILFFLRCKKNK----IITKRNSIRRDNEF 153
++ +I I LS FL+F + G LF KK + + T+ + R + F
Sbjct: 237 GWPHCKKGHRIKMIIVISLSTILFLSFAVFGCLFLSAQKKRRDKKILPTEAAAPRHGDLF 296
Query: 154 SVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPA 213
S+W FDGR V+ DII+AT+DFDIKYC G GG VY AQL V+ALKKLHH E EEPA
Sbjct: 297 SIWGFDGRLVYEDIIKATKDFDIKYCIGAGGSSRVYKAQLPDGNVVALKKLHHLEIEEPA 356
Query: 214 STRSFQNEVDILYP--KYDIETLLSFMDFVCIKDACFWFMN-TWRGEACSVFCTMIMK-P 269
+SF+ EV IL DI L F K A F + RG C++ +
Sbjct: 357 YIKSFKTEVQILSAIRHRDIVKLHGFCQH---KKAMFLIYDYKERGNLCNMLRNEVGAVE 413
Query: 270 LSWIGL-----------------------------------RELEAFVADFGMTMHLYCD 294
L WI EL+AFV+DFG +Y +
Sbjct: 414 LDWIKRVNVVKSIAHALSYMHHDCNTPIIHRDISSNNILLDSELKAFVSDFGTAKLIYPN 473
Query: 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD 342
SSN TLLAGTYGY EKCDVYSFGVVALE +MG+ P EL++ SS+
Sbjct: 474 SSNQTLLAGTYGYIAPELAYTLVVTEKCDVYSFGVVALETMMGKHPKELITLPPSSA--- 530
Query: 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSN---------------PKTPMQ 387
Q+IML D+LD RLSPP D V++D++ V + C+ SN +P
Sbjct: 531 QSIMLGDILDARLSPPADLRVLKDVIPVVRMALKCIDSNLQSRPTMQHVSGALLAHSPFP 590
Query: 388 K-PFHEISISELRNQEM 403
K PFHEIS+ L NQ++
Sbjct: 591 KVPFHEISLWHLMNQDL 607
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082878|emb|CBI22179.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 231/437 (52%), Gaps = 78/437 (17%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGR---LTSCTLTLSNNKLSGSIPSEIGNLQ 57
+IP +IG+L L L L NNLTG IP SL L TL +SNN +SG IPS++GNL+
Sbjct: 609 SIPHQIGTLTQLTVLSLHDNNLTGEIPLSLANLTQLLYLTLYMSNNLISGKIPSQLGNLK 668
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
E+ + + H + GTIPY I K R ++T +I + LS
Sbjct: 669 EVKYFNLSHNNLSGTIPY-------------------SISSWARCKKRHQITLIIVVSLS 709
Query: 118 INAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIK 177
L+ ILG LF R + + + ++ + FS+W+FDG + DII+ATEDFDIK
Sbjct: 710 TTLLLSVAILGFLFHKRRIRKNQLLETTKVKNGDLFSIWDFDGVIAYQDIIQATEDFDIK 769
Query: 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSF 237
YC GTGGYGSVY AQL S KV+ALKKLH WE E+P +SF+NEV +L + ++
Sbjct: 770 YCIGTGGYGSVYRAQLPSGKVVALKKLHGWEREDPTYLKSFENEVQML-TRIRHRNIVKL 828
Query: 238 MDFVCIKDACFWFMNTWRGEACSVFCTM--------------------IMKPLSWIGL-- 275
F C+ C + + + E S++C + I LS++
Sbjct: 829 HGF-CLHKRCMFLVYKYM-EKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALSYMHHDC 886
Query: 276 -----------------RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+LEAFV+DFG L DSSN TLLAGTYGY
Sbjct: 887 DLPIIHRDISSNNILLDSKLEAFVSDFGTARLLDNDSSNRTLLAGTYGYIAPELAYTMVV 946
Query: 308 -EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366
EKCDVYSFG+VALE +MG PGE ++SLSSSS+ QN L DVLD RLS P V +
Sbjct: 947 TEKCDVYSFGMVALETMMGMHPGEFITSLSSSST--QNTTLKDVLDSRLSSPKSTRVANN 1004
Query: 367 IVLVSTILFACLRSNPK 383
I L+ ++ CL NP+
Sbjct: 1005 IALIVSLALKCLHFNPQ 1021
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 408 | ||||||
| TAIR|locus:2138268 | 1045 | AT4G08850 [Arabidopsis thalian | 0.549 | 0.214 | 0.327 | 9.3e-29 | |
| TAIR|locus:2011339 | 1120 | AT1G35710 [Arabidopsis thalian | 0.546 | 0.199 | 0.327 | 3.3e-28 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.279 | 0.101 | 0.404 | 2.7e-26 | |
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.247 | 0.084 | 0.446 | 5.2e-24 | |
| TAIR|locus:2005507 | 976 | ER "ERECTA" [Arabidopsis thali | 0.247 | 0.103 | 0.475 | 2.9e-23 | |
| TAIR|locus:2171973 | 614 | AT5G45780 [Arabidopsis thalian | 0.225 | 0.149 | 0.468 | 4.2e-23 | |
| TAIR|locus:2058759 | 589 | FEI2 "FEI 2" [Arabidopsis thal | 0.257 | 0.178 | 0.435 | 1.1e-21 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.237 | 0.088 | 0.434 | 1.5e-21 | |
| UNIPROTKB|Q8RZV7 | 1294 | P0413C03.22 "Putative extra sp | 0.276 | 0.087 | 0.375 | 1.6e-21 | |
| TAIR|locus:2145407 | 613 | AT5G10290 [Arabidopsis thalian | 0.245 | 0.163 | 0.480 | 1.6e-21 |
| TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 227 (85.0 bits), Expect = 9.3e-29, Sum P(2) = 9.3e-29
Identities = 79/241 (32%), Positives = 116/241 (48%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
TIP + L L L LS N L G I S L + L LS+N LSG IP ++ L
Sbjct: 589 TIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLAL 648
Query: 60 SHLDSRHIFIKGTIPYPLGVL---PLSY---LDL--SFNDLSGGIPKHLTT-KLRRKVTR 110
+H+D H ++G IP P ++ DL S N G P +T+ K K
Sbjct: 649 THVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLKPCSITSSKKSHKDRN 708
Query: 111 LISIVLS--INAXXXXXXXXXXXXXRCKKNKIITKRNSIRRDNE-FSVWNFDGRFVFGDI 167
LI +L I A K+ K I + E S+++FDG+ + +I
Sbjct: 709 LIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEEHTDSESGGETLSIFSFDGKVRYQEI 768
Query: 168 IEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE---PASTRSFQNEVDI 224
I+AT +FD KY GTGG+G VY A+L ++ ++A+KKL+ + P++ + F NE+
Sbjct: 769 IKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKLNETTDSSISNPSTKQEFLNEIRA 827
Query: 225 L 225
L
Sbjct: 828 L 828
|
|
| TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 236 (88.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 78/238 (32%), Positives = 114/238 (47%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP + L L L LS N L G IPS L L S L LS+N LSG IP+ + L
Sbjct: 669 SIP-RLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIAL 727
Query: 60 SHLDSRHIFIKGTIPYPLGVLPLSYLDLSFN-DLSGGIPKHLTTKLR--RKVTR----LI 112
+++D + ++G +P + L N L IPK R +K + ++
Sbjct: 728 TNVDISNNKLEGPLPDTPTFRKATADALEENIGLCSNIPKQRLKPCRELKKPKKNGNLVV 787
Query: 113 SIVLSINAXXXXXXXXXXXXXRC-KKNKIITKRNSIRRDNE-FSVWNFDGRFVFGDIIEA 170
I++ I C +K K+ RN+ E S+++ DG+F + DIIE+
Sbjct: 788 WILVPILGVLVILSICANTFTYCIRKRKLQNGRNTDPETGENMSIFSVDGKFKYQDIIES 847
Query: 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE---PASTRSFQNEVDIL 225
T +FD + GTGGY VY A L + +IA+K+LH +EE P + F NEV L
Sbjct: 848 TNEFDPTHLIGTGGYSKVYRANLQDT-IIAVKRLHDTIDEEISKPVVKQEFLNEVKAL 904
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 178 (67.7 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 49/121 (40%), Positives = 69/121 (57%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP +IG+L +L +L L GN+L G IPS +G + S L L N+L+G+IP E+G L ++
Sbjct: 269 IPKDIGNLTSLETLALYGNSLVGPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVM 328
Query: 61 HLDSRHIFIKGTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+D + G IP L + L L L N L+G IP L+ KLR L + LSIN
Sbjct: 329 EIDFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNELS-KLRN----LAKLDLSIN 383
Query: 120 A 120
+
Sbjct: 384 S 384
|
|
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 183 (69.5 bits), Expect = 5.2e-24, Sum P(3) = 5.2e-24
Identities = 46/103 (44%), Positives = 60/103 (58%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGR-LTSCTLTLSNNKLSGSIPSEIGNLQELS 60
IP + L NL L LSGN LTGSIP +G L L L+NN+L+G IP G L L
Sbjct: 620 IPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLV 679
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTT 102
L+ + G +P LG L L+++DLSFN+LSG + L+T
Sbjct: 680 KLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELST 722
|
|
| TAIR|locus:2005507 ER "ERECTA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 49/103 (47%), Positives = 65/103 (63%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP IG ++ L L LSGN L+GSIP LG LT L L +NKL+GSIP E+GN+ +L
Sbjct: 275 IPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLTGSIPPELGNMSKLH 334
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTT 102
+L+ + G IP LG L L L+++ NDL G IP HL++
Sbjct: 335 YLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSS 377
|
|
| TAIR|locus:2171973 AT5G45780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 192 (72.6 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
Identities = 44/94 (46%), Positives = 60/94 (63%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDS 64
IG L +L +L L N LTG IPS LG+L+ TL LS N+ SG IP+ +G L L++L
Sbjct: 99 IGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRL 158
Query: 65 RHIFIKGTIPYPL-GVLPLSYLDLSFNDLSGGIP 97
+ G +P+ + G+ LS+LDLSFN+LSG P
Sbjct: 159 SRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192
|
|
| TAIR|locus:2058759 FEI2 "FEI 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 170 (64.9 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 47/108 (43%), Positives = 62/108 (57%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
+P E+G L L L L N L SIP+SLG T+ + L NN ++G+IPSEIGNL L
Sbjct: 89 LPPELGKLDQLRLLMLHNNALYQSIPASLGNCTALEGIYLQNNYITGTIPSEIGNLSGLK 148
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKH-LTTKLRR 106
+LD + + G IP LG L L+ ++S N L G IP L +L R
Sbjct: 149 NLDLSNNNLNGAIPASLGQLKRLTKFNVSNNFLVGKIPSDGLLARLSR 196
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 176 (67.0 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQEL 59
+IP E+G+ L L L+ N TG +P +G L+ TL +S+NKL+G +PSEI N + L
Sbjct: 496 SIPREVGNCSALQRLQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKML 555
Query: 60 SHLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGIP 97
LD GT+P +G L L L LS N+LSG IP
Sbjct: 556 QRLDMCCNNFSGTLPSEVGSLYQLELLKLSNNNLSGTIP 594
|
|
| UNIPROTKB|Q8RZV7 P0413C03.22 "Putative extra sporogenous cells" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 184 (69.8 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 45/120 (37%), Positives = 70/120 (58%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
+P E+ + L+ + LS N +TG IP S+G+L+ L + NN L G IP +G+L+ L+
Sbjct: 510 LPAELWESKTLLEISLSNNEITGPIPESIGKLSVLQRLHIDNNLLEGPIPQSVGDLRNLT 569
Query: 61 HLDSRHIFIKGTIPYPL-GVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+L R + G IP L L+ LDLS+N+L+G IP ++ +T L S++LS N
Sbjct: 570 NLSLRGNRLSGIIPLALFNCRKLATLDLSYNNLTGNIPSAIS-----HLTLLDSLILSSN 624
|
|
| TAIR|locus:2145407 AT5G10290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 195 (73.7 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 49/102 (48%), Positives = 60/102 (58%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
T+ +G L NL +L L GN +TG IP G LTS T L L +N+L+G IPS IGNL++L
Sbjct: 85 TLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKL 144
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
L + GTIP L LP L L L N LSG IP+ L
Sbjct: 145 QFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQSL 186
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00031862001 | SubName- Full=Chromosome undetermined scaffold_60, whole genome shotgun sequence; (722 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 408 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-16 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-12 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-11 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-11 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-08 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-07 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-06 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-05 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 5e-05 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 6e-05 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-04 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 2e-04 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 2e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.001 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.002 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.002 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 0.003 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 0.004 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 3e-16
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP +IGS +L L L GN L G IP+SL LTS LTL++N+L G IP E+G ++ L
Sbjct: 156 IPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLK 215
Query: 61 HLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGIPKHL 100
+ + + G IPY +G L L++LDL +N+L+G IP L
Sbjct: 216 WIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL 256
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 2e-15
Identities = 54/118 (45%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP EIG L +L L L NNLTG IPSSLG L + L L NKLSG IP I +LQ+L
Sbjct: 228 IPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLI 287
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
LD + G IP + L L L L N+ +G IP LT+ R +V +L S S
Sbjct: 288 SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFS 345
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 3e-15
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP +I LR+L S+ LSGN++ G+IP SLG +TS L LS N +GSIP +G L L
Sbjct: 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR 493
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSG--GIPKHLTTKLRRKVTRLISIVLSI 118
L+ + G +P LG L +F D +G GIP V I I +
Sbjct: 494 ILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACGPHLSVGAKIGIAFGV 553
Query: 119 NAFLTFLILGILFFLRCKKNKIITKRNSIR 148
+ FL++ + + + ++N + +R + R
Sbjct: 554 SVAFLFLVICAMCWWKRRQNILRAQRIAAR 583
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP E+G +++L +YL NNL+G IP +G LTS L L N L+G IPS +GNL+ L
Sbjct: 204 IPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQ 263
Query: 61 HLDSRHIFIKGTIPYPL-GVLPLSYLDLSFNDLSGGIPK 98
+L + G IP + + L LDLS N LSG IP+
Sbjct: 264 YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 3e-13
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69
L +L LS N +G++P LG L+ L LS NKLSG IP E+ + ++L LD H +
Sbjct: 476 RLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535
Query: 70 KGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
G IP +P LS LDLS N LSG IPK+L V L+ + +S N
Sbjct: 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG-----NVESLVQVNISHNHL 583
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 7e-12
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 18/172 (10%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP E+ S + LVSL LS N L+G IP+S + + L LS N+LSG IP +GN++ L
Sbjct: 515 IPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDL------SGGIPKHLTTKLRRKVTRLISI 114
++ H + G++P L ++ ++ N + G+P ++R+ + I
Sbjct: 575 QVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPP--CKRVRKTPSWWFYI 632
Query: 115 VLSINAFLTFLILGILF-FLRCKKNKIITKRNSIRRDNEFSVWN---FDGRF 162
++ AFL ++ F F+R + N + R +NE W FD +
Sbjct: 633 TCTLGAFLVLALVAFGFVFIRGRNNLELK-----RVENEDGTWELQFFDSKV 679
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 3e-11
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC----TLTLSNNKLSGSIPSEIGNL 56
+P ++GSL L+ L LS N L+G IP L+SC +L LS+N+LSG IP+ +
Sbjct: 490 AVPRKLGSLSELMQLKLSENKLSGEIPD---ELSSCKKLVSLDLSHNQLSGQIPASFSEM 546
Query: 57 QELSHLDSRHIFIKGTIPYPLG-VLPLSYLDLSFNDLSGGIP 97
LS LD + G IP LG V L +++S N L G +P
Sbjct: 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 7e-11
Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 2 IPLEIGSL-RNLVSLYLSGNNLTGSIPS-SLGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
IP +I + +L L LS NN TGSIP S+ L TL LSNN LSG IP++IG+ L
Sbjct: 109 IPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLE--TLDLSNNMLSGEIPNDIGSFSSL 166
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
LD + G IP L L L +L L+ N L G IP+ L
Sbjct: 167 KVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPREL 208
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
T + GS+ NL +L LS N L+G IP+ +G +S L L N L G IP+ + NL L
Sbjct: 131 TGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSL 190
Query: 60 SHLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGIPKHL 100
L + G IP LG + L ++ L +N+LSG IP +
Sbjct: 191 EFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI 232
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 3e-09
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELS 60
IP I SL+ L+SL LS N+L+G IP + +L + L L +N +G IP + +L L
Sbjct: 276 IPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQ 335
Query: 61 HLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGIPKHL 100
L G IP LG L+ LDLS N+L+G IP+ L
Sbjct: 336 VLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 17 LSGNNLTGSIPSSLGRLTSCT--LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIP 74
LS N L+G IP + +S L LSNN +GSIP G++ L LD + + G IP
Sbjct: 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIP 157
Query: 75 YPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
+G L LDL N L G IP LT +T L + L+ N
Sbjct: 158 NDIGSFSSLKVLDLGGNVLVGKIPNSLT-----NLTSLEFLTLASNQL 200
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 9e-08
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 15 LYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI 73
L L L G IP+ + +L ++ LS N + G+IP +G++ L LD + G+I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 74 PYPLGVL-PLSYLDLSFNDLSGGIPKHLTTKLRRK 107
P LG L L L+L+ N LSG +P L +L +
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHR 517
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 12 LVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNL-QELSHLDSRHIFI 69
+VS+ LSG N++G I S++ RL T+ LSNN+LSG IP +I L +L+ +
Sbjct: 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNF 130
Query: 70 KGTIPYPLGVLPLSY-LDLSFNDLSGGIP 97
G+IP G +P LDLS N LSG IP
Sbjct: 131 TGSIPR--GSIPNLETLDLSNNMLSGEIP 157
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP +G+ R+L + L N+ +G +PS +L L +SNN L G I S ++ L
Sbjct: 396 IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ 455
Query: 61 HLD-SRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L +R+ F G +P G L LDLS N SG +P+ L ++ L+ + LS N
Sbjct: 456 MLSLARNKFF-GGLPDSFGSKRLENLDLSRNQFSGAVPRKL-----GSLSELMQLKLSEN 509
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
IP+ + SL L L L N +G IP +LG+ + T L LS N L+G IP + + L
Sbjct: 323 KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNL 382
Query: 60 SHLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGIPKHLT 101
L ++G IP LG L + L N SG +P T
Sbjct: 383 FKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFT 425
|
Length = 968 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 42/203 (20%), Positives = 73/203 (35%), Gaps = 56/203 (27%)
Query: 174 FDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNEVDI-------- 224
++I G G +G VY+A+ + K++A+K + + ++ E+ I
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDR--ERILREIKILKKLKHPN 58
Query: 225 ---LYPKYDIETLLSF-MDFVCIKDACFWFMNTWRG----EACSVFCTMI---------- 266
LY ++ E L M++ C F + EA ++
Sbjct: 59 IVRLYDVFEDEDKLYLVMEY-CEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 267 -----MKP----LSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY---------- 307
+KP L + +ADFG+ L LT GT Y
Sbjct: 118 IVHRDLKPENILLD----EDGHVKLADFGLARQLD-PGEKLTTFVGTPEYMAPEVLLGKG 172
Query: 308 --EKCDVYSFGVVALEILMGRQP 328
+ D++S GV+ E+L G+ P
Sbjct: 173 YGKAVDIWSLGVILYELLTGKPP 195
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 42/204 (20%), Positives = 76/204 (37%), Gaps = 56/204 (27%)
Query: 173 DFDIKYCFGTGGYGSVYIA-QLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL------ 225
F+I G GG+G VY A + K +A+K + E NE+ IL
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKL---ESKEKKEKIINEIQILKKCKHP 57
Query: 226 ---------YPKYDIETLLSFMDFVCIKDACFWFMNTWRG----EACSVFCTMIMKPLSW 272
K ++ ++ F +KD + + + C ++K L +
Sbjct: 58 NIVKYYGSYLKKDELWIVMEFCSGGSLKDL----LKSTNQTLTESQIAYVCKELLKGLEY 113
Query: 273 I---GL--REL-----------EAFVADFGMTMHLYCDSSNLTLLAGTYGY--------- 307
+ G+ R++ E + DFG++ L D+ + GT +
Sbjct: 114 LHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQL-SDTKARNTMVGTPYWMAPEVINGK 172
Query: 308 ---EKCDVYSFGVVALEILMGRQP 328
K D++S G+ A+E+ G+ P
Sbjct: 173 PYDYKADIWSLGITAIELAEGKPP 196
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 282 VADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQP 328
+ADFG+ L SS+LT GT Y K DV+S GV+ E+L G+ P
Sbjct: 139 IADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPP 198
Query: 329 GELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
S + DQ ++ +L P L + ++ CL +P
Sbjct: 199 ------FSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD-LIKKCLNKDPS 246
|
Length = 260 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 56/192 (29%)
Query: 181 GTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMD 239
G GG+G+VY+A+ + K +A+K + + + E++IL K + ++
Sbjct: 2 GEGGFGTVYLARDKKTGKKVAIKIIKK--EDSSSLLEELLREIEILK-KLNHPNIVKLYG 58
Query: 240 FVCIKDACFW-------------FMNTWRG-----EACSVFCTMIM-------------- 267
V + + + G E + ++
Sbjct: 59 -VFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 268 -KP---LSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKC 310
KP L + + +ADFG++ L D S L + GT Y EK
Sbjct: 118 LKPENIL--LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 311 DVYSFGVVALEI 322
D++S GV+ E+
Sbjct: 176 DIWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 52/208 (25%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
EDF+I G G +G V + +L ++ KV A+K L+ WE + A T F+ E D+L
Sbjct: 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN 60
Query: 226 ----------------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSV-- 261
Y D+ TLLS + +D +++ SV
Sbjct: 61 QWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120
Query: 262 --FCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLA----------------- 302
+ +KP + + +ADFG + L D + + +A
Sbjct: 121 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMED 180
Query: 303 --GTYGYEKCDVYSFGVVALEILMGRQP 328
G YG E CD +S GV E+L G P
Sbjct: 181 GKGKYGPE-CDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 49/208 (23%), Positives = 79/208 (37%), Gaps = 52/208 (25%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
+DF+I G G +G V + ++ ++ +V A+K L+ WE + A T F+ E D+L
Sbjct: 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR 60
Query: 226 -------YPKYDIETLLSFMDFVCIKDACFW---FMNTWRGEACSVFCT-MIM------- 267
Y D L MD+ D F + + + M++
Sbjct: 61 RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120
Query: 268 --------KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLA----------------- 302
KP + + + +ADFG + L D + + +A
Sbjct: 121 LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMED 180
Query: 303 --GTYGYEKCDVYSFGVVALEILMGRQP 328
G YG E CD +S GV E+L G P
Sbjct: 181 GKGRYGPE-CDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
++P + +L NL +L LS N+L+ +P L L++ L LS NK+S +P EI L L
Sbjct: 154 SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSAL 211
Query: 60 SHLD-SRHIFIKGTIPYPLGVLP-LSYLDLSFN 90
LD S + I+ + L L LS L+LS N
Sbjct: 212 EELDLSNNSIIE--LLSSLSNLKNLSGLELSNN 242
|
Length = 394 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
+P EI L L L LS N++ + SSL L + + L LSNNKL +P IGNL L
Sbjct: 201 LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLE 258
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
LD + I + LG L L LDLS N LS +P L ++ + + L
Sbjct: 259 TLDLSNNQI--SSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTL 313
|
Length = 394 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELS 60
+P + +L NL +L LSGN ++ +P + L++ L LSNN + + S + NL+ LS
Sbjct: 178 LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLS 235
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L+ + ++ +P +G L L LDLS N +S
Sbjct: 236 GLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268
|
Length = 394 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 172 EDFDIKYCFGTGGYGSVYIA-QLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
E FDI G G YGSVY A + +V+A+K + EE + E+ IL
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVV---PVEE--DLQEIIKEISIL 52
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.003
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 21/87 (24%)
Query: 173 DFDIKYCFGTGGYGSVYIAQLTSSK-VIAL----KKLHHWENEEPASTRSFQNEVDIL-- 225
DF I G GGYG V++A+ + ++AL K L NE R E DIL
Sbjct: 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNE----VRHVLTERDILTT 57
Query: 226 ----------YPKYDIETLLSFMDFVC 242
Y D E L M++V
Sbjct: 58 TKSEWLVKLLYAFQDDEYLYLAMEYVP 84
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL 225
+DF+I G G +G V + ++ + ++ A+K L+ WE + A T F+ E ++L
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL 55
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 39.0 bits (89), Expect = 0.004
Identities = 50/268 (18%), Positives = 80/268 (29%), Gaps = 61/268 (22%)
Query: 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL------- 225
+ I G G +G VY+A+ K++ALK L + F E+ IL
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 226 ------------------YPKYDIETLLSFMD------FVCIKDACFWFMNTWRG----- 256
D +L + + +A F
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 257 EACSVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLA------GTYGY--- 307
+ I + + DFG+ L S ++ A GT GY
Sbjct: 119 SKGIIHRD-IKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177
Query: 308 ------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355
D++S G+ E+L G P E + S++S + + I+ L
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL-PTPSLA 236
Query: 356 SPPVDRMVVRDIVLVSTILFACLRSNPK 383
SP S +L L +PK
Sbjct: 237 SPLSPSNPELISKAASDLLKKLLAKDPK 264
|
Length = 384 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 408 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.97 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.97 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.97 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.96 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.96 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.96 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.96 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.96 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.96 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.95 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.95 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.94 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.94 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.93 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.93 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.93 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.93 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.93 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.93 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.93 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.93 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.93 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.93 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.93 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.92 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.92 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.92 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.92 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.92 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.92 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.92 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.92 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.92 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.92 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.92 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.92 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.92 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.92 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.92 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.92 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.92 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.92 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.92 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.92 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.91 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.91 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.91 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.91 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.91 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.91 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.91 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.91 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.91 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.91 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.91 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.91 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.91 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.91 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.91 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.91 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.91 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.91 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.91 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.91 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.9 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.9 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.9 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.9 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.9 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.9 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.9 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.9 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.9 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.9 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.9 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.9 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.9 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.9 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.9 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.9 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.89 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.89 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.89 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.89 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.89 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.89 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.89 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.89 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.89 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.89 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.89 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.89 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.89 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.89 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.89 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.89 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.89 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.89 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.89 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.89 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.89 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.89 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.89 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.89 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.89 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.89 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.89 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.89 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.89 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.88 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.88 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.88 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.88 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.88 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.88 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.88 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.88 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.88 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.88 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.88 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.88 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.88 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.88 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.88 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.88 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.88 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.88 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.88 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.88 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.88 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.88 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.88 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.88 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.88 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.88 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.88 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.87 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.87 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.87 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.87 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.87 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.87 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.87 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.87 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.87 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.87 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.87 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.87 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.87 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.87 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.87 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.87 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.87 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.87 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.87 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.87 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.87 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.87 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.87 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.87 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.86 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.86 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.86 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.86 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.86 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.86 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.86 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.86 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.86 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.86 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.86 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.86 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.86 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.86 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.86 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.86 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.86 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.86 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.86 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.86 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.86 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.86 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.85 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.85 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.85 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.85 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.85 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.85 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.85 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.85 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.85 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.85 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.85 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.85 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.85 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.85 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.84 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.84 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.84 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.84 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.84 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.84 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.84 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.84 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.84 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.84 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.84 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.84 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.84 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.84 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.84 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.84 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.84 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.84 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.84 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.84 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.84 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.84 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.84 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.84 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.84 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.84 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.84 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.84 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.84 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.84 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.83 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.83 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.83 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.83 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.83 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.83 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.83 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.82 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.82 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.82 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.82 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.82 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.82 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.82 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.82 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.82 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.82 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.81 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.81 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.81 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.81 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.81 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.81 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.81 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.81 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.8 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.8 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.8 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.79 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.79 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.79 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.79 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.79 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.79 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.78 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.77 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.77 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.77 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.77 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.77 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.77 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.75 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.74 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.74 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.73 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.73 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.71 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.7 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.7 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.69 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.68 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.65 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.64 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.59 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.58 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.57 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.57 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.56 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.53 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.52 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.45 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.37 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.37 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.36 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.36 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.33 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.32 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.3 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.26 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.25 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.25 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.21 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.12 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.12 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.07 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.02 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.02 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.98 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.98 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 98.94 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 98.94 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 98.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 98.93 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 98.93 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.92 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 98.89 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 98.89 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 98.89 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.87 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.83 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.81 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 98.76 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 98.76 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.73 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 98.71 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.7 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.66 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 98.64 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 98.64 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.63 | |
| smart00090 | 237 | RIO RIO-like kinase. | 98.58 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.57 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.56 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.56 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 98.55 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.53 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 98.5 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 98.48 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.45 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.43 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.43 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.41 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.36 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.36 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.32 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.31 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.31 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.31 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.3 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.29 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.26 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 98.25 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.23 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 98.22 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.15 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.14 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.14 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.12 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.11 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.1 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 98.02 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 97.94 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 97.88 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.87 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 97.7 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.54 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 97.4 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.38 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 97.35 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 97.24 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 97.22 | |
| PF00560 | 22 | LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le | 97.16 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 97.01 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.92 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 96.84 | |
| KOG0473 | 326 | consensus Leucine-rich repeat protein [Function un | 96.84 | |
| PF00560 | 22 | LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le | 96.84 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 96.81 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.77 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 96.73 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 96.68 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 96.39 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 96.28 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 96.14 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 96.13 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 96.1 | |
| PF13504 | 17 | LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OO | 95.98 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 95.95 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 95.83 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=378.68 Aligned_cols=370 Identities=22% Similarity=0.367 Sum_probs=249.2
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|..+.++++|+.|+|++|+++|.+|..++++++| .|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+
T Consensus 491 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 491 VPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV 570 (968)
T ss_pred cChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcC
Confidence 57788899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred c-cceeEeeccccccCCCcccc--cc--------------c---------c--ccceeEEeeeechhhHHHHHHHHhhhe
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLT--TK--------------L---------R--RKVTRLISIVLSINAFLTFLILGILFF 132 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~--~~--------------~---------~--~~~~~~l~i~l~~~~~~~~l~~~~~~~ 132 (408)
. |+.|++++|+++|.+|..-. .. . . ......+.+++++++++++++++++++
T Consensus 571 ~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (968)
T PLN00113 571 ESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFV 650 (968)
T ss_pred cccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHH
Confidence 9 99999999999998885311 10 0 0 000111111112222222222222222
Q ss_pred eeecccccccccccccCCCcceee----ccCCcccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccc
Q 037624 133 LRCKKNKIITKRNSIRRDNEFSVW----NFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHW 207 (408)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~ 207 (408)
+++++++...++..... ...... .....++++++. ..|...+.||+|+||.||+|+. .+|..||||++...
T Consensus 651 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 726 (968)
T PLN00113 651 FIRGRNNLELKRVENED-GTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726 (968)
T ss_pred HHHhhhccccccccccc-ccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence 22222211111111110 001000 011134444444 4577788999999999999997 57889999998643
Q ss_pred cCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhhc-------------------
Q 037624 208 ENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI------------------- 266 (408)
Q Consensus 208 ~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~------------------- 266 (408)
... ...|++.+. +|+|+++++++ |......++||||+ ++|+|.+++.
T Consensus 727 ~~~-------~~~~~~~l~~l~HpnIv~~~~~----~~~~~~~~lv~Ey~-~~g~L~~~l~~l~~~~~~~i~~~ia~~L~ 794 (968)
T PLN00113 727 NSI-------PSSEIADMGKLQHPNIVKLIGL----CRSEKGAYLIHEYI-EGKNLSEVLRNLSWERRRKIAIGIAKALR 794 (968)
T ss_pred ccc-------cHHHHHHHhhCCCCCcceEEEE----EEcCCCCEEEEeCC-CCCcHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 211 123455554 89999999888 88888899999999 9999877652
Q ss_pred --------------cCccccccccCCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHH
Q 037624 267 --------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVAL 320 (408)
Q Consensus 267 --------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~ 320 (408)
+||.|++++.++.+++. ||.+.....+. ...||.+| .|+|||||||++|
T Consensus 795 yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ 869 (968)
T PLN00113 795 FLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT----KCFISSAYVAPETRETKDITEKSDIYGFGLILI 869 (968)
T ss_pred HhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC----CccccccccCcccccCCCCCcccchhhHHHHHH
Confidence 56777788888888876 66655432221 12445555 7899999999999
Q ss_pred HHHhCCCCCccccccc----CC-ccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 321 EILMGRQPGELLSSLS----SS-SSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 321 Elltg~~p~~~~~~~~----~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
||+||+.|++...... .| ...........++|+.+.... ....+++.++.+++.+||+.+|++| |.+++.++
T Consensus 870 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L 948 (968)
T PLN00113 870 ELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV-SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948 (968)
T ss_pred HHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC-CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHH
Confidence 9999999985322111 00 001112234456777765422 2334667789999999999999999 55554444
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=328.01 Aligned_cols=225 Identities=27% Similarity=0.473 Sum_probs=182.6
Q ss_pred CCcccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeee
Q 037624 159 DGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLS 236 (408)
Q Consensus 159 ~~~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~ 236 (408)
...|++.++.+||++|+..+.||+|+||.||+|.+++|+.||||++...... . .++|.+|+++++ +|+|+++|+|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~--~-~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ--G-EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc--c-hhHHHHHHHHHhcCCCcCcccEEE
Confidence 4479999999999999999999999999999999999999999988753321 1 467999999998 9999999999
Q ss_pred EeEeeecCCc-cchhhhhhcccchhhhhhhc--------------------------------------cCccccccccC
Q 037624 237 FMDFVCIKDA-CFWFMNTWRGEACSVFCTMI--------------------------------------MKPLSWIGLRE 277 (408)
Q Consensus 237 ~~~~~~~~~~-~~~lv~e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~ 277 (408)
| |.+.+ ..++||||| ++|+|.+++. +|+.|++||++
T Consensus 139 y----C~e~~~~~~LVYEym-~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~ 213 (361)
T KOG1187|consen 139 Y----CLEGGEHRLLVYEYM-PNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED 213 (361)
T ss_pred E----EecCCceEEEEEEcc-CCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC
Confidence 9 99988 599999999 9999988863 56667779999
Q ss_pred CceEEeecccccccCCCCCeeeec-ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccc------cccCC
Q 037624 278 LEAFVADFGMTMHLYCDSSNLTLL-AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLS------SLSSS 338 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~~~~~-~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~------~~~~~ 338 (408)
++|||+|||+|+............ .||.|| +|+|||||||||+||+||+.|.+... .+.|.
T Consensus 214 ~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 214 FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 999999999998765412222223 899999 69999999999999999999877432 11222
Q ss_pred ccccccchhhhccCCCCCCccchhHH-HHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 339 SSSDQNIMLLDVLDPRLSPPVDRMVV-RDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 339 ~~~~~~~~~~~~~d~~l~~~~~~~~~-~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
........+.+++||++... .+.. +++.+++++|+.|++.+|.+| |.+++.++
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~--~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEG--EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred HHHHHCcchhheeCCCccCC--CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 23344447899999998731 2222 788999999999999999999 77765555
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-32 Score=254.21 Aligned_cols=191 Identities=21% Similarity=0.343 Sum_probs=148.3
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
.+...+.||+|-||+||.|.+.....||+|.++... ...++|.+|+++|. +|+++|+++++ |..+...++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~----m~~~~f~~Ea~iMk~L~H~~lV~l~gV----~~~~~piyI 278 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS----MSPEAFLREAQIMKKLRHEKLVKLYGV----CTKQEPIYI 278 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc----cChhHHHHHHHHHHhCcccCeEEEEEE----EecCCceEE
Confidence 344567899999999999999777799999998642 23578999999997 88888888888 998889999
Q ss_pred hhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
|+||| ++|+|.+++. +.+.|++++++..+||+||||||....+.
T Consensus 279 VtE~m-~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~ 357 (468)
T KOG0197|consen 279 VTEYM-PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE 357 (468)
T ss_pred EEEec-ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence 99999 9999999994 45668889999999999999999554332
Q ss_pred CeeeecccC-C---CC-----------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 296 SNLTLLAGT-Y---GY-----------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 296 ~~~~~~~gt-~---~y-----------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
... ..|. . +| .|||||||||+||||+| |+.|+.... ...+.+.++...+-+
T Consensus 358 Y~~--~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms----------n~ev~~~le~GyRlp- 424 (468)
T KOG0197|consen 358 YTA--SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS----------NEEVLELLERGYRLP- 424 (468)
T ss_pred eee--cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC----------HHHHHHHHhccCcCC-
Confidence 211 1111 1 11 89999999999999999 999986431 122345555544432
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+..|+..+.+|+..||+.+|++|++
T Consensus 425 --~P~~CP~~vY~lM~~CW~~~P~~RPt 450 (468)
T KOG0197|consen 425 --RPEGCPDEVYELMKSCWHEDPEDRPT 450 (468)
T ss_pred --CCCCCCHHHHHHHHHHhhCCcccCCC
Confidence 23457888999999999999999955
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=251.74 Aligned_cols=195 Identities=24% Similarity=0.397 Sum_probs=148.6
Q ss_pred ccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc-cchhh
Q 037624 175 DIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA-CFWFM 251 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~-~~~lv 251 (408)
...+.||+|+||+||+|.+.....||||++......... .++|.+|+.+|. +|||++.++|. |.+.. ...+|
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~----~~~~~~~~~iV 118 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGA----CTSPPGSLCIV 118 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEE----EcCCCCceEEE
Confidence 334559999999999999965555999999864433222 679999999998 89999998888 88877 78899
Q ss_pred hhhcccchhhhhhhc------------------------------------cCccccccccCC-ceEEeecccccccCCC
Q 037624 252 NTWRGEACSVFCTMI------------------------------------MKPLSWIGLREL-EAFVADFGMTMHLYCD 294 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~~~-~~ki~DfGla~~~~~~ 294 (408)
+||+ ++|+|..++. +|+.|++++.++ ++||+|||+++.....
T Consensus 119 tEy~-~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 119 TEYM-PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EEeC-CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999 9999998882 567788888887 9999999999987543
Q ss_pred CCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
....+...||+.| +|+|||||||+||||+||+.||...... .....++....+++.
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~---------~~~~~v~~~~~Rp~~- 267 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV---------QVASAVVVGGLRPPI- 267 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhcCCCCCC-
Confidence 2333446788777 6899999999999999999999754321 112223323333221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+..+...+..++..||+.||+.|++
T Consensus 268 --p~~~~~~l~~l~~~CW~~dp~~RP~ 292 (362)
T KOG0192|consen 268 --PKECPPHLSSLMERCWLVDPSRRPS 292 (362)
T ss_pred --CccCCHHHHHHHHHhCCCCCCcCCC
Confidence 1235667778888999999999943
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-32 Score=262.46 Aligned_cols=205 Identities=20% Similarity=0.303 Sum_probs=161.0
Q ss_pred cccHHHHHHHHhhcc---------cceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc-
Q 037624 161 RFVFGDIIEATEDFD---------IKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY- 226 (408)
Q Consensus 161 ~~~~~~l~~at~~f~---------~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~- 226 (408)
.++|+|--+|...|. .+++||.|.||.||+|+++- ...||||.++... ...++++|+.|+.||+
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQ 686 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhccc
Confidence 577887776666653 56899999999999999842 3479999998754 3457889999999998
Q ss_pred -ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccc
Q 037624 227 -PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLS 271 (408)
Q Consensus 227 -~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~ 271 (408)
.|||+.+|-|. .......+++.||| +||+|..+|. +...|
T Consensus 687 FdHPNIIrLEGV----VTks~PvMIiTEyM-ENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARN 761 (996)
T KOG0196|consen 687 FDHPNIIRLEGV----VTKSKPVMIITEYM-ENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARN 761 (996)
T ss_pred CCCCcEEEEEEE----EecCceeEEEhhhh-hCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhh
Confidence 99999999999 88889999999999 9999999984 44568
Q ss_pred cccccCCceEEeecccccccCCCCCe-eeecccCC----------CC----cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCDSSN-LTLLAGTY----------GY----EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~~~~-~~~~~gt~----------~y----~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
++++.++.+||+||||+|.+..+... .++..|-+ .| .+|||||||||+||.++ |.+||..+
T Consensus 762 ILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm--- 838 (996)
T KOG0196|consen 762 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--- 838 (996)
T ss_pred eeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc---
Confidence 88899999999999999998766533 33333332 22 78999999999999988 99998532
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
. ...+...++...+- +.+++|+..+-+|++.||++|-.+|
T Consensus 839 ------S-NQdVIkaIe~gyRL---PpPmDCP~aL~qLMldCWqkdR~~R 878 (996)
T KOG0196|consen 839 ------S-NQDVIKAIEQGYRL---PPPMDCPAALYQLMLDCWQKDRNRR 878 (996)
T ss_pred ------c-hHHHHHHHHhccCC---CCCCCCcHHHHHHHHHHHHHHhhcC
Confidence 1 22233444443332 2246899999999999999999999
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=230.50 Aligned_cols=201 Identities=20% Similarity=0.285 Sum_probs=157.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCc-cch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDA-CFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~-~~~ 249 (408)
.+|...++||+|+||+|||+.. .+|..||.|.++. ...+.+..++...|+.+| +..||+|++.|++....++. ...
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f-~~md~k~rq~~v~Ei~lL-kQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF-GMMDAKARQDCVKEISLL-KQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch-hhccHHHHHHHHHHHHHH-HhcCCchHHHHHHHhhhccchhhH
Confidence 4677889999999999999985 7899999999984 445667788999999999 67777777777664344444 489
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------------cCccccccccCCceEEeecccc
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
+++||+ ..|+|...+. +||.|+.++.++.+|++||||+
T Consensus 97 ivmE~c-~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 97 IVMELC-DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHhh-cccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999 9999988773 7999999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
|.+....+..++.+||+.| .||||||+||+++||+.-++||....... .-..+.....+
T Consensus 176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~---------L~~KI~qgd~~ 246 (375)
T KOG0591|consen 176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS---------LCKKIEQGDYP 246 (375)
T ss_pred hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH---------HHHHHHcCCCC
Confidence 9998777777889999999 79999999999999999999997542111 11122222222
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+-.+. .-...+.+|+..|+..||+.|+.
T Consensus 247 ~~p~~---~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 247 PLPDE---HYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred CCcHH---HhhhHHHHHHHHHccCCcccCCC
Confidence 11112 23445667788899999999964
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-31 Score=259.38 Aligned_cols=197 Identities=21% Similarity=0.339 Sum_probs=150.7
Q ss_pred HhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
+.+....+.||+|+||+||+|+.. +.+.||||.++.. .+.+..++|.+|+++++ +|+|+|+++|+ |
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGV----C 558 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGV----C 558 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEE----E
Confidence 344555678999999999999863 3457999999863 34457889999999998 99999999999 9
Q ss_pred cCCccchhhhhhcccchhhhhhhc-----------------------------------------------cCccccccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI-----------------------------------------------MKPLSWIGL 275 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------------------~k~~~~~l~ 275 (408)
..++..++|+||| ..|+|.++|. +...|.++.
T Consensus 559 ~~~~P~~MvFEYm-~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 559 REGDPLCMVFEYM-DHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG 637 (774)
T ss_pred ccCCeeEEEEEec-ccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec
Confidence 9999999999999 9999999984 112233356
Q ss_pred cCCceEEeecccccccCCCCCeee----------ecccCCCC----cccchhhhhHHHHHHHh-CCCCCcccccccCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSSNLT----------LLAGTYGY----EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS 340 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~~~~----------~~~gt~~y----~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 340 (408)
+++.+||+||||+|.....+.... ...-++-| ++||||||||||||++| |+.|+..
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g--------- 708 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG--------- 708 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc---------
Confidence 889999999999998764332110 00111122 89999999999999999 9999873
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...++.+..+-+..+. ..++.|+..+.+|++.||+.+|++|++
T Consensus 709 lSn~EVIe~i~~g~lL----~~Pe~CP~~vY~LM~~CW~~~P~~RPs 751 (774)
T KOG1026|consen 709 LSNQEVIECIRAGQLL----SCPENCPTEVYSLMLECWNENPKRRPS 751 (774)
T ss_pred cchHHHHHHHHcCCcc----cCCCCCCHHHHHHHHHHhhcCcccCCC
Confidence 3334445555555553 334578889999999999999999933
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-30 Score=232.40 Aligned_cols=204 Identities=22% Similarity=0.299 Sum_probs=156.4
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeE
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMD 239 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~ 239 (408)
.++..|++. .+.||+|..|+|||+++ ++++.+|+|.+.. ..+....++..+|++++ ++-+++.+++||+
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il-~~~~spyIV~~yg 144 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEIL-RSCQSPYIVGFYG 144 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHH-hhCCCCCeeeEeE
Confidence 355555554 47899999999999999 5688999999954 23456678999999999 5557888888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeec
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
.+........++|||| ++|+|...+. +||.|+++...+++|||||
T Consensus 145 aF~~~~~~isI~mEYM-DgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDF 223 (364)
T KOG0581|consen 145 AFYSNGEEISICMEYM-DGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDF 223 (364)
T ss_pred EEEeCCceEEeehhhc-CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccc
Confidence 7665555689999999 9999988773 7999999999999999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
|.++.+... ...+.+||..| .++||||||+.++|+++|+-|+..... . ....-..+..|++.
T Consensus 224 GVS~~lvnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~--~--~~~~~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 224 GVSGILVNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP--P--YLDIFELLCAIVDE 297 (364)
T ss_pred cccHHhhhh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC--C--CCCHHHHHHHHhcC
Confidence 999987543 45678999999 789999999999999999999864310 0 11122235566663
Q ss_pred CCC-CccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 354 RLS-PPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 354 ~l~-~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..+ .+. . .+..++...+-.|+++||.+|
T Consensus 298 ppP~lP~-~---~fS~ef~~FV~~CL~Kdp~~R 326 (364)
T KOG0581|consen 298 PPPRLPE-G---EFSPEFRSFVSCCLRKDPSER 326 (364)
T ss_pred CCCCCCc-c---cCCHHHHHHHHHHhcCCcccC
Confidence 222 211 1 245556777888999999999
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=229.90 Aligned_cols=154 Identities=21% Similarity=0.312 Sum_probs=130.1
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
..+|...+.||+|+||+||+|++. ++..||||.+..... .....+....|+++|. +|+|+|.++.+ +..++.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~----~~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDC----IEDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEE----EecCCe
Confidence 356777788999999999999984 588999999976432 4456777899999997 77777777777 888899
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccC------CceEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRE------LEAFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~------~~~ki~DfGla 288 (408)
.++||||+ .+|+|..|+. +||.|+++... -..||+|||+|
T Consensus 84 i~lVMEyC-~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 84 IYLVMEYC-NGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEEEEEeC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999 9999999984 79999998843 56899999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|.+... ....+.+|++-| .|+|+||.|+||||+++|+.||+.
T Consensus 163 R~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 163 RFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 998643 344678999998 799999999999999999999973
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=239.49 Aligned_cols=197 Identities=20% Similarity=0.280 Sum_probs=156.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..|...+.||+|||+.||+++. ..|+.||+|++.+.........+...+||++.. +|+|+|+++.+ +.+....
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~----FEDs~nV 93 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF----FEDSNNV 93 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE----eecCCce
Confidence 4588889999999999999998 789999999998876667777888999999987 88888888888 8889999
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
|++.|++ ++++|..++. +|.-|+++++++++||+|||||..+..+.
T Consensus 94 YivLELC-~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 94 YIVLELC-HRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EEEEEec-CCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 9999999 9999988874 56667889999999999999999998776
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....+.+||+.| ..+||||.|||+|-|++|++||+... -......+.-.....| .
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---------vkety~~Ik~~~Y~~P--~-- 239 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---------VKETYNKIKLNEYSMP--S-- 239 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---------HHHHHHHHHhcCcccc--c--
Confidence 667789999999 68999999999999999999997431 1111222222222111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+|+..-++++|.+|++
T Consensus 240 -~ls~~A~dLI~~lL~~~P~~Rps 262 (592)
T KOG0575|consen 240 -HLSAEAKDLIRKLLRPNPSERPS 262 (592)
T ss_pred -ccCHHHHHHHHHHhcCCcccCCC
Confidence 11223446667789999999954
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=226.64 Aligned_cols=198 Identities=21% Similarity=0.328 Sum_probs=156.0
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..++||+|+||.||.++-. +++.+|+|.+++.........+...+|..+|. +||.++++.-. +.+...
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys----FQt~~k 99 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS----FQTEEK 99 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe----cccCCe
Confidence 468999999999999999999875 48899999999876666556778889999997 78888887766 788889
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++|.+|+ .+|.|+.++. +||.|++++++|+++|+||||++....+
T Consensus 100 LylVld~~-~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 100 LYLVLDYL-NGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEEEEecc-CCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 99999999 9999998883 7999999999999999999999977666
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.....+.+||+.| ..+|+||+||++|||+||.+||.... .......+...++..+. ..
T Consensus 179 ~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~---------~~~~~~~I~~~k~~~~p-~~ 248 (357)
T KOG0598|consen 179 GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED---------VKKMYDKILKGKLPLPP-GY 248 (357)
T ss_pred CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc---------HHHHHHHHhcCcCCCCC-cc
Confidence 6666778999999 78999999999999999999997432 11112333333322211 21
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
...+.. ++...-+..||++|.
T Consensus 249 ls~~ar---dll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 LSEEAR---DLLKKLLKRDPRQRL 269 (357)
T ss_pred CCHHHH---HHHHHHhccCHHHhc
Confidence 223333 444567899999994
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=228.04 Aligned_cols=200 Identities=22% Similarity=0.268 Sum_probs=152.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcc----hhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPA----STRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~----~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+.|-..+.||+|+||.|-+|.- .+|+.||||++++....... ......+|+++|. .|||+|++.++ ...
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~----f~~ 247 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF----FEV 247 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee----eec
Confidence 3455678899999999999986 66999999999865433211 2233579999996 77777777777 677
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCcccccccc---CCceEEeecccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR---ELEAFVADFGMT 288 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~---~~~~ki~DfGla 288 (408)
....|+|+||+ ++|.|++.+. +||.|+++.. +..+||+|||+|
T Consensus 248 ~ds~YmVlE~v-~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 248 PDSSYMVLEYV-EGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CCceEEEEEEe-cCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 78889999999 9999998772 8999999874 489999999999
Q ss_pred cccCCCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccc-hhhhccC
Q 037624 289 MHLYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNI-MLLDVLD 352 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~-~~~~~~d 352 (408)
+... ..+.+.+.+||+.| .|+|+||+|||||-++||.+||.... .+. ...++..
T Consensus 327 K~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~---------~~~sl~eQI~~ 396 (475)
T KOG0615|consen 327 KVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY---------TDPSLKEQILK 396 (475)
T ss_pred hccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc---------CCccHHHHHhc
Confidence 9875 44566789999999 58999999999999999999997421 122 2233444
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.... ...+.+-..+..+++.+.+..||++|.+
T Consensus 397 G~y~f~-p~~w~~Iseea~dlI~~mL~VdP~~R~s 430 (475)
T KOG0615|consen 397 GRYAFG-PLQWDRISEEALDLINWMLVVDPENRPS 430 (475)
T ss_pred Cccccc-ChhhhhhhHHHHHHHHHhhEeCcccCcC
Confidence 443321 1334455566778888999999999944
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=221.17 Aligned_cols=156 Identities=19% Similarity=0.266 Sum_probs=126.4
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+...++|+|+||+||||+.++ |+.||||++... .+++...+-.++|+++|. +|+|+|+++.. +......
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEV----Frrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEV----FRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHH----HHhccee
Confidence 356777889999999999999965 999999999763 344566677899999998 99999999988 8888888
Q ss_pred hhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
.+|+||+ +..-|...- ++||.|+++..++.+|+||||+||.+....
T Consensus 77 hLVFE~~-dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 77 HLVFEYC-DHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred EEEeeec-chHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 8999988 432222111 289999999999999999999999997555
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLS 333 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~ 333 (408)
..+|..+.|.+| ..+||||.||++.||+||.+-+...+
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S 206 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS 206 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc
Confidence 556666666666 78999999999999999998765443
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=224.61 Aligned_cols=217 Identities=17% Similarity=0.307 Sum_probs=154.7
Q ss_pred HHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeeecCC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~~~ 245 (408)
...+....+.||+|.||.||+|.+ .|+.||||++...+ .+++.+|.++.. ||.|+..+++. -..+.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaa---D~~~~ 278 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAA---DNKDN 278 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhc---cccCC
Confidence 335667789999999999999999 47789999997532 467888888765 77776655554 22222
Q ss_pred ---ccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCCceEE
Q 037624 246 ---ACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRELEAFV 282 (408)
Q Consensus 246 ---~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~~~ki 282 (408)
.+.|||.+|. ++|||++||. +|..|+++.++++..|
T Consensus 279 gs~TQLwLvTdYH-e~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 279 GSWTQLWLVTDYH-EHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred CceEEEEEeeecc-cCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 3689999999 9999999994 6788999999999999
Q ss_pred eecccccccCCCCCe----eeecccCCCC------------------cccchhhhhHHHHHHHhC----------CCCCc
Q 037624 283 ADFGMTMHLYCDSSN----LTLLAGTYGY------------------EKCDVYSFGVVALEILMG----------RQPGE 330 (408)
Q Consensus 283 ~DfGla~~~~~~~~~----~~~~~gt~~y------------------~k~DVySfGvvl~Elltg----------~~p~~ 330 (408)
+|+|||-....+... .+..+||..| ..+||||||.|+||++.+ +.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 999999877655332 2567899999 579999999999999864 34554
Q ss_pred ccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHh
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELR 399 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~ 399 (408)
..-..+...+...+....+-+.|.++. .+...+++..+.+++..||..+|..|.++.-...++.++.
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~RP~ipn--rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKLRPNIPN--RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred cCCCCCCCHHHHhcceeecccCCCCCc--ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 332222111111111112223333332 2456678999999999999999999965554445555554
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-29 Score=234.62 Aligned_cols=205 Identities=21% Similarity=0.342 Sum_probs=148.0
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeE
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMD 239 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~ 239 (408)
.+.+++....+.+.....||+|+||+||||++. | .||||.+.... ..++..+.|.+|+.++. ||.|++=++|+
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~-- 456 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGA-- 456 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehh--
Confidence 334555555566677789999999999999994 3 49999998754 34457899999999996 67666666666
Q ss_pred eeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeec
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
|..+.. .+|..++ ++.+|+.+++ +|..|+.+.+++++||+||
T Consensus 457 --~~~p~~-AIiTqwC-eGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 457 --CMNPPL-AIITQWC-EGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred --hcCCce-eeeehhc-cCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecc
Confidence 777666 8899999 9999999985 6778888999999999999
Q ss_pred ccccccCC--CCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCc-cccccchh
Q 037624 286 GMTMHLYC--DSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSS-SSDQNIML 347 (408)
Q Consensus 286 Gla~~~~~--~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~~~~~~~~ 347 (408)
||+..... .........|...| ..+||||||||+|||+||..||. ....+... ....
T Consensus 533 GLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGr---- 607 (678)
T KOG0193|consen 533 GLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGR---- 607 (678)
T ss_pred cceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecc----
Confidence 99865321 11112223344444 78999999999999999999997 32221110 1111
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..+.|++. .....+.+++.+|...||..+|++|
T Consensus 608 -G~l~pd~s----~~~s~~pk~mk~Ll~~C~~~~~~eR 640 (678)
T KOG0193|consen 608 -GYLMPDLS----KIRSNCPKAMKRLLSDCWKFDREER 640 (678)
T ss_pred -cccCccch----hhhccCHHHHHHHHHHHHhcCcccC
Confidence 11111111 2334677788899999999999999
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=237.11 Aligned_cols=198 Identities=19% Similarity=0.247 Sum_probs=157.5
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
..-++|...++||+|.||+|+.+.++ +++.+|||.+++.........+..+.|.+++. +||-++++..+ +..
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~----fQT 440 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC----FQT 440 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc----ccc
Confidence 34568999999999999999999984 57899999999876655666788899998886 78888888888 888
Q ss_pred Cccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccC
Q 037624 245 DACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
....+.||||. .+|++..+.+ +|..|++||.+|++||+||||+|...
T Consensus 441 ~~~l~fvmey~-~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 441 KEHLFFVMEYV-AGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred CCeEEEEEEec-CCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999999 8888554442 68889999999999999999999876
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.....+++.+||+.| ..+|.|||||+||||++|..||... ..+.....|+.....-
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd---------dEee~FdsI~~d~~~y--- 587 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD---------DEEEVFDSIVNDEVRY--- 587 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC---------CHHHHHHHHhcCCCCC---
Confidence 555567889999999 6799999999999999999999732 2223333343333322
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
+.-...+.+.++.+-+.++|++|
T Consensus 588 --P~~ls~ea~~il~~ll~k~p~kR 610 (694)
T KOG0694|consen 588 --PRFLSKEAIAIMRRLLRKNPEKR 610 (694)
T ss_pred --CCcccHHHHHHHHHHhccCcccc
Confidence 12234445667777899999999
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=250.32 Aligned_cols=193 Identities=21% Similarity=0.348 Sum_probs=146.4
Q ss_pred hhcccceeecccceeEEEEEEeCC--Cc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS--SK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~--g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.+.+..+.||+|.||.||+|++.+ |. .||||.+... .+.+...+|.+|..+|+ .|+|+++++|. |.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv----~l 765 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGV----CL 765 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEe----ec
Confidence 445667889999999999999843 43 4899998753 34566789999999998 99999999999 99
Q ss_pred CCccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCCceEEe
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRELEAFVA 283 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~~~ki~ 283 (408)
+....+++.||| ++|+|..++. +...|.++++...+||+
T Consensus 766 ~~~~~~i~leyM-~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 766 DSGPPLILLEYM-EGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CCCCcEEEehhc-ccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence 999999999999 9999999984 33456668888999999
Q ss_pred ecccccccCCCCCeeeecccCC-------------CC-cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhh
Q 037624 284 DFGMTMHLYCDSSNLTLLAGTY-------------GY-EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 284 DfGla~~~~~~~~~~~~~~gt~-------------~y-~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
||||||.+...........+.. .| +|+|||||||+|||++| |..||..... ...+.
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n---------~~v~~ 915 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN---------FEVLL 915 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch---------HHHHH
Confidence 9999996544332221111111 11 89999999999999999 9999974322 11122
Q ss_pred hcc-CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 349 DVL-DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 349 ~~~-d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
.++ +.++.. +..|+..+.+|+..||+.+|++|
T Consensus 916 ~~~~ggRL~~-----P~~CP~~ly~lM~~CW~~~pe~R 948 (1025)
T KOG1095|consen 916 DVLEGGRLDP-----PSYCPEKLYQLMLQCWKHDPEDR 948 (1025)
T ss_pred HHHhCCccCC-----CCCCChHHHHHHHHHccCChhhC
Confidence 222 234433 23577788899999999999999
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-28 Score=228.19 Aligned_cols=199 Identities=21% Similarity=0.296 Sum_probs=154.5
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
++++-...+....++||-|-||.||.|.|+. .-.||||.++. +....++|+.|..+|. +|+|+|+++|+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE----DtMeveEFLkEAAvMKeikHpNLVqLLGV---- 331 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGV---- 331 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh----cchhHHHHHHHHHHHHhhcCccHHHHhhh----
Confidence 3444444466677899999999999999955 56799999974 3445789999999998 99999999999
Q ss_pred ecCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfG 286 (408)
|..+..+|++.||| ..|+|.+|+. +...|.++.++-.+||+|||
T Consensus 332 CT~EpPFYIiTEfM-~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 332 CTHEPPFYIITEFM-CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred hccCCCeEEEEecc-cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccc
Confidence 99999999999999 9999999994 22234445678889999999
Q ss_pred cccccCCCCCeeeeccc-----------CCCC----cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhc
Q 037624 287 MTMHLYCDSSNLTLLAG-----------TYGY----EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDV 350 (408)
Q Consensus 287 la~~~~~~~~~~~~~~g-----------t~~y----~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 350 (408)
|+|++..+..+ ...| +..| .|+|||+|||+|||+.| |-.||..+.. ..+.+.
T Consensus 411 LsRlMtgDTYT--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl----------SqVY~L 478 (1157)
T KOG4278|consen 411 LSRLMTGDTYT--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------SQVYGL 478 (1157)
T ss_pred hhhhhcCCcee--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH----------HHHHHH
Confidence 99998755432 2222 2234 79999999999999999 8899875421 123445
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+....+. ..++.|+..+.+|+.+||+.+|.+|++
T Consensus 479 LEkgyRM---~~PeGCPpkVYeLMraCW~WsPsDRPs 512 (1157)
T KOG4278|consen 479 LEKGYRM---DGPEGCPPKVYELMRACWNWSPSDRPS 512 (1157)
T ss_pred Hhccccc---cCCCCCCHHHHHHHHHHhcCCcccCcc
Confidence 5555443 234578889999999999999999933
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=221.32 Aligned_cols=217 Identities=19% Similarity=0.305 Sum_probs=156.8
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeeecCCccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..+...+||+|+||.||||.+. ++.||||++... ..++|.+|-++.. +|+|++++++.-........++
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 3444578999999999999994 589999999642 4678999999876 8999999998844333334589
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------------cCccccccccCCceEEeeccc
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
++|++|. ++|+|.+||. +|..|+++.+|+++.|+||||
T Consensus 284 wLVt~fh-~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 284 WLVTEFH-PKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eEEeeec-cCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 9999999 9999999994 677788899999999999999
Q ss_pred ccccCCCCCe--eeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCc--ccccccCC-------
Q 037624 288 TMHLYCDSSN--LTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGE--LLSSLSSS------- 338 (408)
Q Consensus 288 a~~~~~~~~~--~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~--~~~~~~~~------- 338 (408)
|..+...... ....+||..| .+.||||.|.|||||+++...++ ........
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 9988654322 3457899999 47899999999999999765542 11111100
Q ss_pred ---ccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHh
Q 037624 339 ---SSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELR 399 (408)
Q Consensus 339 ---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~ 399 (408)
....+...+.+-..|.++.. ......+..+.+.+..||+.||+.|.++..++.|..++.
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~--W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDA--WRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhh--hhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 01111112223333443321 222245777888899999999999977776666665554
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-27 Score=216.44 Aligned_cols=211 Identities=15% Similarity=0.163 Sum_probs=143.7
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEe
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFM 238 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~ 238 (408)
.++.+++ +......||+|++|.||+|.+ +|+.||||+++..........+.|.+|+.++. +|+|++++++++
T Consensus 14 ~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 14 CIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 4455555 223336799999999999999 68899999997644333334578889999997 888888888773
Q ss_pred EeeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEee
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~D 284 (408)
..........++++||+ ++|+|.+++. ++|.|+++++++.+||+|
T Consensus 88 ~~~~~~~~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~d 166 (283)
T PHA02988 88 IDIVDDLPRLSLILEYC-TRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIIC 166 (283)
T ss_pred EecccCCCceEEEEEeC-CCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcc
Confidence 21112244678999999 8888877762 567888899999999999
Q ss_pred cccccccCCCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc
Q 037624 285 FGMTMHLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV 350 (408)
Q Consensus 285 fGla~~~~~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 350 (408)
||+++...... ....||..| .++|||||||++|||+||+.||..... ......+
T Consensus 167 fg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---------~~~~~~i 234 (283)
T PHA02988 167 HGLEKILSSPP---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---------KEIYDLI 234 (283)
T ss_pred cchHhhhcccc---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---------HHHHHHH
Confidence 99998654321 112344433 689999999999999999999974321 1111111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
+......+. +..+...+.+++..||+.||++| +.+.+..+
T Consensus 235 ~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 235 INKNNSLKL---PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred HhcCCCCCC---CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 111111110 11234457788899999999999 44444433
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-27 Score=221.66 Aligned_cols=190 Identities=23% Similarity=0.355 Sum_probs=143.6
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEe
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFM 238 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~ 238 (408)
.++|++|.+ .+-||+|+.|.||+|++. ++.||||+++... ..+|+-|. +|+||..+.|+
T Consensus 120 eiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGV- 180 (904)
T KOG4721|consen 120 EIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGV- 180 (904)
T ss_pred cCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhh----------hhhHHHHHhccCcceeeEeee-
Confidence 455665543 356999999999999995 5679999986421 23455553 77777777777
Q ss_pred EeeecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeec
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
|.....+.++|||+ ..|.|+..|+ +|.-|+++..+-.+||+||
T Consensus 181 ---CtqsPcyCIiMEfC-a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 181 ---CTQSPCYCIIMEFC-AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred ---ecCCceeEEeeecc-ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccc
Confidence 99999999999999 9999988874 6777888888889999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
|.++..... ++...++||..| +|+||||||||||||+||..||..+......|.... .
T Consensus 257 GTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs---------N 326 (904)
T KOG4721|consen 257 GTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS---------N 326 (904)
T ss_pred cchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC---------C
Confidence 999988654 445568899988 899999999999999999999986654433222211 1
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.+.- ..+..|+.-+.-|+..||+..|..|+
T Consensus 327 sL~L---pvPstcP~GfklL~Kqcw~sKpRNRP 356 (904)
T KOG4721|consen 327 SLHL---PVPSTCPDGFKLLLKQCWNSKPRNRP 356 (904)
T ss_pred cccc---cCcccCchHHHHHHHHHHhcCCCCCc
Confidence 1111 22335566666777889999999993
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=218.36 Aligned_cols=195 Identities=22% Similarity=0.375 Sum_probs=148.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||||+-+ +.+.||+|.+.+... .....+...+|++++. +|+|++.++.. +......
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~es----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLES----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHh----hcccceE
Confidence 46777788999999999999975 478899999976443 2345677999999997 88888887777 7788889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++|.||+ .+ +|+.++. +||.|+++...+++|+||||+||.+..+.
T Consensus 77 ~vVte~a-~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 77 WVVTEYA-VG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred EEEehhh-hh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9999998 44 8887772 78999999999999999999999988776
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
...+.+.||+-| ..+|.||+|||+||+.+|++||.... -...+..|.-.....+.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s---------i~~Lv~~I~~d~v~~p~---- 221 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS---------ITQLVKSILKDPVKPPS---- 221 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH---------HHHHHHHHhcCCCCCcc----
Confidence 667889999999 67999999999999999999985321 11112223222222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+..+...-+.+||.+|++
T Consensus 222 -~~S~~f~nfl~gLL~kdP~~Rlt 244 (808)
T KOG0597|consen 222 -TASSSFVNFLQGLLIKDPAQRLT 244 (808)
T ss_pred -cccHHHHHHHHHHhhcChhhccc
Confidence 22233445555678999999933
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=213.14 Aligned_cols=199 Identities=19% Similarity=0.188 Sum_probs=139.4
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|+..+.||+|+||.||+|.. .+|+.||||.+.............+.+|++++. .|++++.+..+ +..+...+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~----~~~~~~~~ 76 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYA----YETKDALC 76 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEE----EccCCeEE
Confidence 367778999999999999987 568999999987543322233456889999986 66666666665 66777888
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++|+|..++. +||.|+++++++.+||+|||+++.....
T Consensus 77 lv~e~~-~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 77 LVLTIM-NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred EEEEec-CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 999999 8888865431 6888888999999999999999875432
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
. ......||..| .++|||||||++|||+||+.||........ .......+..+... .
T Consensus 156 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~-----~ 224 (285)
T cd05631 156 E-TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-----REEVDRRVKEDQEE-----Y 224 (285)
T ss_pred C-eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-----HHHHHHHhhccccc-----C
Confidence 2 22345677777 689999999999999999999874321100 00000111111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.||++|++
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLG 249 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcC
Confidence 1112234667889999999999954
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=200.61 Aligned_cols=192 Identities=19% Similarity=0.269 Sum_probs=150.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||.|+||.|..++.+ +|..+|+|+++........+.+...+|..+|. .||.++++.+. +.+....
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t----~~d~~~l 119 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGT----FKDNSNL 119 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEe----eccCCeE
Confidence 47888899999999999999984 47889999998766555556667788999987 88999888888 8889999
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++|||. ++|.++.+++ +||.|+++|.+|+.||.|||+|+....
T Consensus 120 ymvmeyv-~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 120 YMVMEYV-PGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred EEEEecc-CCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 9999999 9999999984 799999999999999999999998743
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.+.+.+||+.| ..+|.|||||++|||+.|.+||.....+ ..-..|+...+.-|. +.
T Consensus 197 -rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~---------~iY~KI~~~~v~fP~--~f 264 (355)
T KOG0616|consen 197 -RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI---------QIYEKILEGKVKFPS--YF 264 (355)
T ss_pred -cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH---------HHHHHHHhCcccCCc--cc
Confidence 24568999999 6789999999999999999999643221 123445555554321 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCc
Q 037624 364 VRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~R 385 (408)
... +.+|...-++.|-.+|
T Consensus 265 s~~---~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 265 SSD---AKDLLKKLLQVDLTKR 283 (355)
T ss_pred CHH---HHHHHHHHHhhhhHhh
Confidence 122 2233444566677777
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-26 Score=214.29 Aligned_cols=202 Identities=19% Similarity=0.255 Sum_probs=147.7
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
.....+.||+|-||+|..+....+..||||+++.... ...+++|.+|+++|+ +|||++.++|. |..++.+.+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGV----C~~DePicm 612 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGV----CVQDDPLCM 612 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEee----eecCCchHH
Confidence 3445678999999999999998889999999986433 345789999999998 99999999999 999999999
Q ss_pred hhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||| ++|+|.+++. +.+.|.+++.++++||+|||++|-+....
T Consensus 613 I~EYm-EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 613 ITEYM-ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHH-hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999 9999998883 34566778899999999999999776544
Q ss_pred Ceeee--cccCCCC------------cccchhhhhHHHHHHHh--CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 296 SNLTL--LAGTYGY------------EKCDVYSFGVVALEILM--GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 296 ~~~~~--~~gt~~y------------~k~DVySfGvvl~Ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
..... .+=...| ++||||+|||.|||+++ ..+||.....-+- -....++++..-....
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v------ven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV------VENAGEFFRDQGRQVV 765 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH------HHhhhhhcCCCCccee
Confidence 32210 1111222 89999999999999876 7889864321100 0011122221111000
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.-|...+.++++.||..+-++|++
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPs 793 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPS 793 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCC
Confidence 0112345667889999999999999954
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-26 Score=214.77 Aligned_cols=196 Identities=19% Similarity=0.256 Sum_probs=141.4
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+|+..+.||+|+||.||+|+.. +++.||||.+...........+.+..|..++. .|++++.+.++ +...+..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~----~~~~~~~ 76 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSC----FQTMDRL 76 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEE----EecCCEE
Confidence 4777899999999999999985 47799999997543222233455677777764 46666666666 6677788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|..++. +||.|+++++++.+||+|||+++......
T Consensus 77 ~lv~E~~-~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 77 YFVMEYV-NGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEEEcCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999 8888876552 78899999999999999999998654333
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||+.| .++|||||||++|||+||+.||..... ......+.+.....+.
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---------~~~~~~i~~~~~~~p~---- 222 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---------DELFQSIMEHNVAYPK---- 222 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCCC----
Confidence 333456788877 689999999999999999999864321 1112222222222111
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.+|++|++
T Consensus 223 -~~s~~~~~li~~~l~~~p~~R~~ 245 (323)
T cd05616 223 -SMSKEAVAICKGLMTKHPGKRLG 245 (323)
T ss_pred -cCCHHHHHHHHHHcccCHHhcCC
Confidence 12234567889999999999954
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=205.15 Aligned_cols=200 Identities=20% Similarity=0.296 Sum_probs=148.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+...+||.|..++||+|+. +.++.||||++..+...+ ..+...+|+..|+ .|||+++.... +..+...
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~s----Fvv~~~L 99 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCS----FVVDSEL 99 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEE----EEeccee
Confidence 4788889999999999999987 678999999998754333 3678899999996 77777766665 6778889
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
|+||.|| ..|++.+.+. +|+-|++++.+|.+||+|||.+..+..
T Consensus 100 WvVmpfM-a~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 100 WVVMPFM-AGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred EEeehhh-cCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999 8999887773 789999999999999999999876654
Q ss_pred CCCee----eecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 294 DSSNL----TLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 294 ~~~~~----~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
..... .+.+||+.| .|+|||||||...||++|..||.....+.- +..-+....
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv---------Ll~tLqn~p 249 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV---------LLLTLQNDP 249 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH---------HHHHhcCCC
Confidence 33222 456899887 799999999999999999999975433221 111111100
Q ss_pred -----CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 -----SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 -----~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+....-.+.+.+++-.|+++||.+|++
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt 286 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT 286 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC
Confidence 01000112222345667788899999999944
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-27 Score=223.10 Aligned_cols=203 Identities=15% Similarity=0.211 Sum_probs=140.9
Q ss_pred hhcccceeecccceeEEEEEEeCC--C--cE-EEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS--S--KV-IALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~--g--~~-vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++....+.||+|+||.||+|++.. + .. ||||..+...........+|++|+++|. .|+|+++++|+ +..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV----a~~ 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV----AVL 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE----EcC
Confidence 344445889999999999999843 3 23 8999998633344567889999999997 78888888887 899
Q ss_pred Cccchhhhhhcccchhhhhhhcc----------------------------------CccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMIM----------------------------------KPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~~----------------------------------k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++|+|++ .+|+|.+++.. ...|.++..+..+|||||||++.
T Consensus 233 ~~Pl~ivmEl~-~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 233 EEPLMLVMELC-NGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred CCccEEEEEec-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 99999999999 99999999952 23344466778899999999986
Q ss_pred cCCCC--C-ee--------eecccCCCC-cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 291 LYCDS--S-NL--------TLLAGTYGY-EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 291 ~~~~~--~-~~--------~~~~gt~~y-~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
-..-. . .. ....-+.-| .|+|||||||++||+++ |..||...... .....++-...+.
T Consensus 312 ~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---------~v~~kI~~~~~r~ 382 (474)
T KOG0194|consen 312 GSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---------EVKAKIVKNGYRM 382 (474)
T ss_pred CcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---------HHHHHHHhcCccC
Confidence 53110 0 00 001111233 89999999999999999 89998754221 1122332222222
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccc
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFH 391 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~ 391 (408)
+. +...+..+..+...||..+|++| |..+..
T Consensus 383 ~~---~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 383 PI---PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CC---CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11 11334556677779999999999 664433
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-26 Score=215.77 Aligned_cols=194 Identities=21% Similarity=0.268 Sum_probs=144.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +++.||||.+...........+.+.+|++++. +|+|++++++. +..+...
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~ 93 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCS----FQDENRV 93 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEE----EEcCCEE
Confidence 47888899999999999999985 58899999997543223334567889999887 78888888877 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. +||.|+++++++.+||+|||+++......
T Consensus 94 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 94 YFLLEFV-VGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEEEcCC-CCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 9999999 8888876652 78889999999999999999998764322
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....||+.| .++|||||||++|||+||+.||...... .....+....+.-+ ..
T Consensus 173 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---------~~~~~i~~~~~~~p--~~- 237 (329)
T PTZ00263 173 ---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF---------RIYEKILAGRLKFP--NW- 237 (329)
T ss_pred ---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH---------HHHHHHhcCCcCCC--CC-
Confidence 234677777 6899999999999999999998642211 11122222222111 00
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..||+.||++|++
T Consensus 238 --~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 238 --FDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred --CCHHHHHHHHHHhhcCHHHcCC
Confidence 1123567888999999999965
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=215.58 Aligned_cols=158 Identities=22% Similarity=0.318 Sum_probs=130.9
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..++|+....||+|+||.||.|+-+ +|..+|+|++++.........+....|=.+|. ..+.+|+++-. +.+..
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs----FQD~~ 214 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS----FQDKE 214 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE----ecCCC
Confidence 5678999999999999999999975 49999999998866555556677888888887 77788888776 78888
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..||+|||. ++|++...|. +||.|.++|..|++|++||||++-+..
T Consensus 215 ~LYLiMEyl-PGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 215 YLYLIMEYL-PGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred eeEEEEEec-CCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 999999999 9999988772 899999999999999999999954321
Q ss_pred -----------------------CCC----ee--------------------eecccCCCC------------cccchhh
Q 037624 294 -----------------------DSS----NL--------------------TLLAGTYGY------------EKCDVYS 314 (408)
Q Consensus 294 -----------------------~~~----~~--------------------~~~~gt~~y------------~k~DVyS 314 (408)
+.. .. ...+||+-| ..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 000 00 135899988 6799999
Q ss_pred hhHHHHHHHhCCCCCccc
Q 037624 315 FGVVALEILMGRQPGELL 332 (408)
Q Consensus 315 fGvvl~Elltg~~p~~~~ 332 (408)
+|||+|||+.|.+||...
T Consensus 374 LG~ImyEmLvGyPPF~s~ 391 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSE 391 (550)
T ss_pred HHHHHHHHHhCCCCCCCC
Confidence 999999999999999743
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-26 Score=214.34 Aligned_cols=191 Identities=20% Similarity=0.275 Sum_probs=135.6
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||||.++..........+.+..|..++. .|+|++++.++ +..+...++++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~----~~~~~~~~lv~e 76 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCT----FQTKEHLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeE----EEcCCEEEEEEc
Confidence 36999999999999984 47889999997543222233455666666654 78888887776 666778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 77 YL-NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 99 8888876652 6888999999999999999999865433333345
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||++|+.||..... ......+.......+ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---------~~~~~~i~~~~~~~~--~---~~~~ 221 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---------DELFDSILNDRPHFP--R---WISK 221 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHcCCCCCC--C---CCCH
Confidence 6788887 679999999999999999999864221 111111111111100 1 1123
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..|++.+|++|++
T Consensus 222 ~~~~ll~~~l~~~P~~R~~ 240 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLG 240 (316)
T ss_pred HHHHHHHHHccCCHHHcCC
Confidence 3557778999999999943
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=211.94 Aligned_cols=200 Identities=19% Similarity=0.290 Sum_probs=141.0
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||||.++..........+.+.+|..++. .|+|++++.++ +......++++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~----~~~~~~~~lv~e 76 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSC----FQTESRLFFVIE 76 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEE----EEcCCEEEEEEe
Confidence 46999999999999984 58899999997643333344566788888875 68888887777 777788899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. ++|.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 77 FV-SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 99 8888876652 7888999999999999999999754332333345
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||++|||+||+.||+...................+......-+ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~---~~~~ 230 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP--R---SLSV 230 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC--C---CCCH
Confidence 6788887 589999999999999999999964321110000001111112222222211 0 1123
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..|++.||++|++
T Consensus 231 ~~~~li~~~L~~dP~~R~~ 249 (329)
T cd05588 231 KASSVLKGFLNKDPKERLG 249 (329)
T ss_pred HHHHHHHHHhccCHHHcCC
Confidence 4667888999999999965
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-26 Score=207.80 Aligned_cols=196 Identities=23% Similarity=0.322 Sum_probs=148.1
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|...+.||+|+||.||||.. ..++.||+|.+...... ...++...|+.+++ +++|+.+.++. +..+...+
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~~~~it~yygs----yl~g~~Lw 87 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCDSPNITEYYGS----YLKGTKLW 87 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcCcchHHhhhhh----eeecccHH
Confidence 466668899999999999998 45889999999764332 24577889999997 66666666665 67788899
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++|||+ .+|++...+. +|+.|+++..++.+|++|||++-.+.....
T Consensus 88 iiMey~-~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 88 IIMEYC-GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHHHh-cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 999999 8998887773 677888888889999999999998876655
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
...+.+||+.| .|+||||+|++.+||++|.+|+...+.+.... .+..-.-|.+.+
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf------lIpk~~PP~L~~------- 233 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF------LIPKSAPPRLDG------- 233 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE------eccCCCCCcccc-------
Confidence 55778999877 89999999999999999999987544322110 011111222222
Q ss_pred HHHHHHHHHHHhhccCCCCCcCCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+.+-.|++++|+.|+++
T Consensus 234 ~~S~~~kEFV~~CL~k~P~~RpsA 257 (467)
T KOG0201|consen 234 DFSPPFKEFVEACLDKNPEFRPSA 257 (467)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCH
Confidence 233445677788999999999554
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=211.78 Aligned_cols=191 Identities=21% Similarity=0.255 Sum_probs=138.6
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||||.+...........+.+..|.+++. .|++++++.++ +......++|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~----~~~~~~~~lv~E 76 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCC----FQTKDRLFFVME 76 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeE----EEcCCeEEEEEe
Confidence 36999999999999985 47899999997643323334566778888875 68888888777 677778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++++|..++. +||.|+++++++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 77 YV-NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 99 8888865541 7889999999999999999999865333333344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||++|||+||+.||..... ......+.......+ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---------~~~~~~i~~~~~~~p--~---~~~~ 221 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---------DDLFESILHDDVLYP--V---WLSK 221 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---------HHHHHHHHcCCCCCC--C---CCCH
Confidence 5688777 689999999999999999999864321 111122222211111 0 1123
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.++...|++.+|++|++
T Consensus 222 ~~~~ll~~~L~~dp~~R~~ 240 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLG 240 (321)
T ss_pred HHHHHHHHHhccCHHHcCC
Confidence 4567888999999999963
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-26 Score=214.81 Aligned_cols=191 Identities=19% Similarity=0.240 Sum_probs=139.2
Q ss_pred eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
+.||+|+||.||+|+. .+|+.||+|+++............+.+|++++. +|+|++++.++ +..+...++++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~----~~~~~~~~lv~e~ 76 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYS----FQTHDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEE----EEcCCEEEEEEeC
Confidence 3699999999999987 468899999997543323334566788999886 78888887777 6777888999999
Q ss_pred cccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeec
Q 037624 255 RGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 255 ~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
+ ++++|..++. +||.|++++.++.+||+|||+++............
T Consensus 77 ~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 77 A-NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 9 8888876652 78899999999999999999998643333333446
Q ss_pred ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHH
Q 037624 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVL 369 (408)
Q Consensus 302 ~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 369 (408)
.||..| .++|||||||+++||+||+.||..... ......+.......+ . .....
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---------~~~~~~~~~~~~~~p--~---~~~~~ 221 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EKLFELILMEEIRFP--R---TLSPE 221 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---------HHHHHHHHcCCCCCC--C---CCCHH
Confidence 788887 689999999999999999999853211 111111111111111 0 11234
Q ss_pred HHHHHHhhccCCCCCcCC
Q 037624 370 VSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 370 ~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+++..|++.||++|++
T Consensus 222 ~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHHccCCHHHcCC
Confidence 567888999999999963
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=212.87 Aligned_cols=189 Identities=19% Similarity=0.211 Sum_probs=138.3
Q ss_pred ecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|+||.||+|+.. +++.||+|.+.............+.+|++++. +|+|++++... +......++++||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~lv~e~~- 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFS----FQSPEKLYLVLAFI- 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeE----EecCCeEEEEEcCC-
Confidence 799999999999985 47899999987543333344567888999886 77777777666 66778889999999
Q ss_pred cchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeeccc
Q 037624 257 EACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAG 303 (408)
Q Consensus 257 ~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~g 303 (408)
++|+|..++. +||.|++++.++.+||+|||+++.............|
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 155 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG 155 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence 8998877662 7888999999999999999999865433333445678
Q ss_pred CCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHH
Q 037624 304 TYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVS 371 (408)
Q Consensus 304 t~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 371 (408)
|..| .++|||||||+++||+||+.||..... ......+.......+ ......+.
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---------~~~~~~~~~~~~~~~-----~~~~~~~~ 221 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---------NEMYRKILQEPLRFP-----DGFDRDAK 221 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---------HHHHHHHHcCCCCCC-----CcCCHHHH
Confidence 8887 679999999999999999999863211 111122222211111 11123456
Q ss_pred HHHHhhccCCCCCcCC
Q 037624 372 TILFACLRSNPKTPMQ 387 (408)
Q Consensus 372 ~l~~~C~~~~P~~Rm~ 387 (408)
+++..|++.||++|++
T Consensus 222 ~li~~~L~~dp~~R~~ 237 (312)
T cd05585 222 DLLIGLLSRDPTRRLG 237 (312)
T ss_pred HHHHHHcCCCHHHcCC
Confidence 7788999999999943
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-26 Score=195.94 Aligned_cols=195 Identities=24% Similarity=0.332 Sum_probs=153.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|.||.||.|+.+ ++-.||+|++.+......+..+++.+|+++-+ +|||+.+++++ +.+....
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~----fhd~~ri 97 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY----FHDSKRI 97 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh----eecccee
Confidence 57889999999999999999984 46789999997765555556788999999987 88888888888 8888999
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
+++.||. ..|+++..+. +||.|.++..++..||+|||-+-.-.
T Consensus 98 yLilEya-~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 98 YLILEYA-PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEEEec-CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999 8888887772 78999999999999999999987643
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.....+.+||.-| .++|+|++||+.+|++.|.+||+... .......+..-++..+
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---------~~etYkrI~k~~~~~p--- 242 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---------HSETYKRIRKVDLKFP--- 242 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---------hHHHHHHHHHccccCC---
Confidence 3345678999999 78999999999999999999997432 1122222222222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..-...+.+++..|+..+|.+||.
T Consensus 243 --~~is~~a~dlI~~ll~~~p~~r~~ 266 (281)
T KOG0580|consen 243 --STISGGAADLISRLLVKNPIERLA 266 (281)
T ss_pred --cccChhHHHHHHHHhccCcccccc
Confidence 111234567889999999999954
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=211.94 Aligned_cols=200 Identities=18% Similarity=0.286 Sum_probs=140.0
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||+|.++..........+.+.+|+.++. +|+|++++.++ +......++++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~----~~~~~~~~lv~E 76 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC----FQTESRLFFVIE 76 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeE----EEeCCEEEEEEe
Confidence 46999999999999984 57899999997643333344566778888764 68888887777 667778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 77 YV-NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 99 8888876541 7889999999999999999999864333333344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||+||+.||+...................+......-+ .....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p-----~~~~~ 230 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP-----RSLSV 230 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC-----CCCCH
Confidence 5788887 589999999999999999999863221111000000111111222222111 11223
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..|++.||++|++
T Consensus 231 ~~~~ll~~~L~~dP~~R~~ 249 (329)
T cd05618 231 KAASVLKSFLNKDPKERLG 249 (329)
T ss_pred HHHHHHHHHhcCCHHHcCC
Confidence 4567888999999999965
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-26 Score=216.23 Aligned_cols=199 Identities=19% Similarity=0.218 Sum_probs=139.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +|+.||||.+.... .....+.+.+|++++. +|+|+++++++ +..+...
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 147 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDM----FDHNGEI 147 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeE----eccCCeE
Confidence 34556688999999999999974 68899999986422 2334567899999997 78888777777 6777788
Q ss_pred hhhhhhcccchhhhhhh-----------------------------ccCccccccccCCceEEeecccccccCCCCCeee
Q 037624 249 WFMNTWRGEACSVFCTM-----------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT 299 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l-----------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~ 299 (408)
++++||+ ++++|.... ++|+.|+++++++.+||+|||+++..........
T Consensus 148 ~lv~e~~-~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 226 (353)
T PLN00034 148 QVLLEFM-DGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN 226 (353)
T ss_pred EEEEecC-CCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence 8999999 777765432 1788999999999999999999987654332233
Q ss_pred ecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 300 LLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 300 ~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
...||..| .++|||||||++|||++|+.||.......+ . .....+...... ..
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-----~-~~~~~~~~~~~~----~~ 296 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW-----A-SLMCAICMSQPP----EA 296 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH-----H-HHHHHHhccCCC----CC
Confidence 45677766 279999999999999999999863211000 0 000111100000 00
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 297 ~~~~~~~l~~li~~~l~~~P~~Rpt 321 (353)
T PLN00034 297 PATASREFRHFISCCLQREPAKRWS 321 (353)
T ss_pred CCccCHHHHHHHHHHccCChhhCcC
Confidence 1122335678888999999999944
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=211.62 Aligned_cols=196 Identities=20% Similarity=0.263 Sum_probs=138.5
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--cc-CCcceeeeEeEeeecCCccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PK-YDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~-~n~~~l~~~~~~~~~~~~~~ 248 (408)
+|+..+.||+|+||.||+|+.. +++.||||++...........+.+..|++++. .| ++++.+..+ +...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~----~~~~~~~ 76 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSC----FQTMDRL 76 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEE----EEcCCEE
Confidence 4777899999999999999985 47789999997543223334567888888875 33 334444444 5566778
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|..++. +||.|+++++++.+||+|||+++......
T Consensus 77 ~lv~E~~-~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 77 YFVMEYV-NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999 8888876652 78899999999999999999987543333
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||..| .++|||||||++|||+||+.||..... ......+.+.....+ .
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---------~~~~~~i~~~~~~~~--~-- 222 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---------DELFQSIMEHNVSYP--K-- 222 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHHHcCCCCCC--C--
Confidence 333456788877 579999999999999999999864321 111122222221111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.+|++|++
T Consensus 223 -~~~~~~~~li~~~l~~~P~~R~~ 245 (324)
T cd05587 223 -SLSKEAVSICKGLLTKHPAKRLG 245 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCC
Confidence 11234567888999999999954
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-26 Score=215.11 Aligned_cols=198 Identities=19% Similarity=0.285 Sum_probs=134.4
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.++|...+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|++++. +|+|+++++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~---- 79 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA---- 79 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE----
Confidence 46788889999999999999974 235689999987432 2233567899999886 57777776665
Q ss_pred ecC-Cccchhhhhhcccchhhhhhh-------------------------------------------------------
Q 037624 242 CIK-DACFWFMNTWRGEACSVFCTM------------------------------------------------------- 265 (408)
Q Consensus 242 ~~~-~~~~~lv~e~~~~~g~l~~~l------------------------------------------------------- 265 (408)
+.. +...++++||+ ++|+|.+++
T Consensus 80 ~~~~~~~~~lv~ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 80 CTKPNGPLMVIVEFC-KYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred ecCCCCceEEEEecC-CCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 443 44578889999 888775332
Q ss_pred ----------------------------------------ccCccccccccCCceEEeecccccccCCCCCee--eeccc
Q 037624 266 ----------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAG 303 (408)
Q Consensus 266 ----------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~g 303 (408)
++||.|++++.++.+||+|||+++......... ....+
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 268889999999999999999998754322111 12234
Q ss_pred CCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHH
Q 037624 304 TYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLV 370 (408)
Q Consensus 304 t~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 370 (408)
+..| .++|||||||++|||+| |+.||...... ......+.+...... .......+
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~l 306 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--------EEFCQRLKDGTRMRA----PENATPEI 306 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--------HHHHHHHhcCCCCCC----CCCCCHHH
Confidence 4444 78999999999999997 99998642110 000111111111100 01223456
Q ss_pred HHHHHhhccCCCCCcCC
Q 037624 371 STILFACLRSNPKTPMQ 387 (408)
Q Consensus 371 ~~l~~~C~~~~P~~Rm~ 387 (408)
.+++..||+.||++|++
T Consensus 307 ~~li~~cl~~dp~~RPs 323 (338)
T cd05102 307 YRIMLACWQGDPKERPT 323 (338)
T ss_pred HHHHHHHccCChhhCcC
Confidence 78999999999999944
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=208.60 Aligned_cols=155 Identities=23% Similarity=0.275 Sum_probs=120.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC-Cc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-DA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-~~ 246 (408)
.+.|+..+.||+|.||.||||+. .+|+.||+|++... ..+.....-..+||.+|. .|+|+++|.+. +... ..
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d-~~~~~~~~t~~REI~ILr~l~HpNIikL~ei---vt~~~~~ 191 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFD-NEKEGFPITAIREIKILRRLDHPNIIKLEEI---VTSKLSG 191 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecc-cCCCcchHHHHHHHHHHHhcCCCcccceeeE---EEecCCc
Confidence 45677788999999999999996 67999999999863 345566777889999996 67777777766 2233 46
Q ss_pred cchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 247 CFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
..|+|+|||. + +|.-.+ ++|..|++++.++..||+|||||+.+.
T Consensus 192 siYlVFeYMd-h-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 192 SIYLVFEYMD-H-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred eEEEEEeccc-c-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 8899999993 2 221111 289999999999999999999999876
Q ss_pred CCCCe-eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSSN-LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~~-~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... .|..+=|.+| .++|+||.||||.||++|++.+..
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G 322 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG 322 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC
Confidence 55433 4545555555 899999999999999999998753
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-26 Score=210.40 Aligned_cols=194 Identities=20% Similarity=0.224 Sum_probs=142.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++. +|+|++++.++ +.++...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~ 76 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWT----EHDQRFL 76 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhh----hccCCeE
Confidence 36788899999999999999985 58899999986533222234567889999886 78888888776 6777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++......
T Consensus 77 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 77 YMLMEYV-PGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EEEEeCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 9999999 8888877652 78889999999999999999998764321
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....||..| .++|||||||+++||+||+.||..... ......+......-+ .
T Consensus 156 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---------~~~~~~i~~~~~~~~--~-- 219 (291)
T cd05612 156 ---WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---------FGIYEKILAGKLEFP--R-- 219 (291)
T ss_pred ---ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCcCCC--c--
Confidence 234577766 679999999999999999999864221 111122222222111 0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||.+|++
T Consensus 220 -~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 220 -HLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred -cCCHHHHHHHHHHcCCCHHHccC
Confidence 11224567888999999999954
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=211.55 Aligned_cols=190 Identities=18% Similarity=0.242 Sum_probs=137.9
Q ss_pred eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
+.||+|+||.||+++. .+|+.||+|.+.............+.+|++++. +|+|++++.++ +......++++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~----~~~~~~~~lv~E~ 76 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA----FQTHDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeE----EecCCEEEEEEeC
Confidence 3699999999999997 468899999997543223334566788998886 78888888777 6677788999999
Q ss_pred cccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeec
Q 037624 255 RGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 255 ~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
+ ++|+|..++. +||.|+++++++.+||+|||+++............
T Consensus 77 ~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 77 A-NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred C-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 9 8888876552 78899999999999999999988643333333345
Q ss_pred ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHH
Q 037624 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVL 369 (408)
Q Consensus 302 ~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 369 (408)
.||..| .++|||||||++|||+||+.||..... ......+.......+ . .....
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---------~~~~~~~~~~~~~~p--~---~~~~~ 221 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ERLFELILMEEIRFP--R---TLSPE 221 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHHhcCCCCCC--C---CCCHH
Confidence 677777 689999999999999999999863211 111112221111111 0 11234
Q ss_pred HHHHHHhhccCCCCCcC
Q 037624 370 VSTILFACLRSNPKTPM 386 (408)
Q Consensus 370 ~~~l~~~C~~~~P~~Rm 386 (408)
+.+++..|++.||++|+
T Consensus 222 ~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 222 AKSLLAGLLKKDPKQRL 238 (323)
T ss_pred HHHHHHHHccCCHHHhC
Confidence 55778899999999995
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-25 Score=210.97 Aligned_cols=196 Identities=19% Similarity=0.258 Sum_probs=140.5
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+|+..+.||+|+||.||+|... +|+.||+|.+...........+.+..|..++. .|++++++..+ +......
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~----~~~~~~~ 76 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSC----FQTVDRL 76 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeE----EecCCEE
Confidence 4677899999999999999974 58899999987533222334556778888875 34556666666 6667788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|..++. +||.|+++++++.+||+|||+++......
T Consensus 77 ~lv~Ey~-~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 77 YFVMEYV-NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred EEEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999 8888876652 78889999999999999999998654333
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||..| .++|||||||+++||+||+.||..... ......+.......+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---------~~~~~~i~~~~~~~p----- 221 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---------DELFQSIMEHNVSYP----- 221 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCC-----
Confidence 233345678777 689999999999999999999864321 111222222222111
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..|++.+|++|++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~ 245 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLG 245 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCC
Confidence 011234567888999999999954
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-25 Score=210.19 Aligned_cols=195 Identities=18% Similarity=0.229 Sum_probs=139.7
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeeecCCcc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~~~~~~ 247 (408)
|...+.||+|+||.||+|... +|+.||||.++..........+.+.+|++++. +|+|++++.++ +.....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~----~~~~~~ 76 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFAC----FQTEDH 76 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeE----EEcCCE
Confidence 456788999999999999974 58899999997543222333456777776642 68888888877 677788
Q ss_pred chhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
.++++||+ ++++|..++. +||.|+++++++.+||+|||+++......
T Consensus 77 ~~lv~E~~-~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 77 VCFVMEYA-AGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEEEEcCC-CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 89999999 8888865542 78889999999999999999987643333
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||..| .++|||||||++|||+||+.||..... ......+.......+ .
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---------~~~~~~i~~~~~~~p--~-- 222 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---------EEVFDSIVNDEVRYP--R-- 222 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCC--C--
Confidence 333446688877 589999999999999999999863211 111112222111111 0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 223 -~~~~~~~~li~~~L~~dP~~R~~ 245 (324)
T cd05589 223 -FLSREAISIMRRLLRRNPERRLG 245 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHhHcCC
Confidence 11234567888999999999943
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-26 Score=212.64 Aligned_cols=200 Identities=17% Similarity=0.252 Sum_probs=149.6
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
+..++|...+.||+|+|++||+|+- ..++.+|||++.+.......-.+-...|-.+|. .||.+++|+-- +.+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T----FQD 145 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT----FQD 145 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE----eec
Confidence 3456888899999999999999997 458899999997654433333444556666654 78888888777 778
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+...|+|+||. ++|+|..++. +||.|+++++||++||+|||-|+.+
T Consensus 146 ~~sLYFvLe~A-~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 146 EESLYFVLEYA-PNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred ccceEEEEEec-CCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 88899999999 9999998883 8999999999999999999999988
Q ss_pred CCCCCe-------------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccch
Q 037624 292 YCDSSN-------------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIM 346 (408)
Q Consensus 292 ~~~~~~-------------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~ 346 (408)
.+.... ....+||..| ..+|+|+||||||.|+.|++||..... ...
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne---------yli 295 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE---------YLI 295 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH---------HHH
Confidence 642211 1458999999 789999999999999999999974322 222
Q ss_pred hhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 347 LLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 347 ~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...|++-...-+. .++ ..+.+|+..-+..||.+|..
T Consensus 296 FqkI~~l~y~fp~-~fp----~~a~dLv~KLLv~dp~~Rlt 331 (604)
T KOG0592|consen 296 FQKIQALDYEFPE-GFP----EDARDLIKKLLVRDPSDRLT 331 (604)
T ss_pred HHHHHHhcccCCC-CCC----HHHHHHHHHHHccCcccccc
Confidence 3444443332211 111 23445556678999999933
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=211.00 Aligned_cols=188 Identities=19% Similarity=0.223 Sum_probs=138.6
Q ss_pred eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
+.||+|+||.||++.. .+|+.||||++.............+.+|++++. +|+|++++..+ +......++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~~lv~Ey 76 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYS----FQTKDRLCFVMEY 76 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEE----EEcCCEEEEEEeC
Confidence 4699999999999997 458899999997543333344567889999886 78888887777 6777888999999
Q ss_pred cccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeec
Q 037624 255 RGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 255 ~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
+ ++|+|..++. +||.|++++.++.+||+|||+++............
T Consensus 77 ~-~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 77 V-NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred C-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 9 8888876652 78899999999999999999998653333333445
Q ss_pred ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc--CCCCCCccchhHHHHH
Q 037624 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL--DPRLSPPVDRMVVRDI 367 (408)
Q Consensus 302 ~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~ 367 (408)
.||..| .++|||||||+++||+||+.||...... .....+. +..+.. ...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---------~~~~~~~~~~~~~p~-------~~~ 219 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---------KLFELILMEDIKFPR-------TLS 219 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---------HHHHHhccCCccCCC-------CCC
Confidence 788887 6899999999999999999998632111 0011111 111111 112
Q ss_pred HHHHHHHHhhccCCCCCcC
Q 037624 368 VLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm 386 (408)
..+.+++..|++.+|++|+
T Consensus 220 ~~~~~li~~~L~~dP~~R~ 238 (328)
T cd05593 220 ADAKSLLSGLLIKDPNKRL 238 (328)
T ss_pred HHHHHHHHHHcCCCHHHcC
Confidence 3456777899999999995
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=209.50 Aligned_cols=192 Identities=21% Similarity=0.257 Sum_probs=138.6
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||||.+...........+.+..|..++. .|+|++++.++ +......++++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~----~~~~~~~~iv~E 76 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCC----FQTPDRLFFVME 76 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeE----EEcCCEEEEEEc
Confidence 36999999999999984 58899999997543222334566778888775 57888887777 677778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 y~-~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 77 FV-NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred CC-CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 99 8888876652 7889999999999999999998864333333345
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||++|||+||+.||..... ......+.......+ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---------~~~~~~i~~~~~~~~--~---~~~~ 221 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---------DDLFEAILNDEVVYP--T---WLSQ 221 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---------HHHHHHHhcCCCCCC--C---CCCH
Confidence 5788887 579999999999999999999864321 111122222221111 0 1122
Q ss_pred HHHHHHHhhccCCCCCcCCC
Q 037624 369 LVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.+.+++..|++.||++|++.
T Consensus 222 ~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHcccCHHHCCCC
Confidence 45678889999999999543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-25 Score=211.02 Aligned_cols=198 Identities=19% Similarity=0.366 Sum_probs=148.7
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchhhh
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
.|+..+.||+||.+.||++...+.+.+|+|++... ..+.+....|.+|+++|.+-..+.+++.++|| ...++..|+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY-Ev~d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDY-EVTDGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeee-eccCceEEEEe
Confidence 57778899999999999999998899999998753 34556788999999999844455566666665 66788899999
Q ss_pred hhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCee
Q 037624 253 TWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL 298 (408)
Q Consensus 253 e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~ 298 (408)
||- ..+|..++. +||.|+++. .|..||.|||+|..+..+.+..
T Consensus 440 E~G--d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 440 ECG--DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ecc--cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 984 445555552 566666554 5789999999999987765543
Q ss_pred --eecccCCCC-----------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 299 --TLLAGTYGY-----------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 299 --~~~~gt~~y-----------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
...+||..| .+|||||+|||||+|+.|+.||.... .....+..+.||
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--------n~~aKl~aI~~P 588 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--------NQIAKLHAITDP 588 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--------HHHHHHHhhcCC
Confidence 457899999 68999999999999999999997432 122346677777
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
...-++...+. -..+++++..|++.||.+|
T Consensus 589 ~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR 618 (677)
T KOG0596|consen 589 NHEIEFPDIPE--NDELIDVMKCCLARDPKKR 618 (677)
T ss_pred CccccccCCCC--chHHHHHHHHHHhcCcccC
Confidence 54322211111 1227889999999999999
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-25 Score=211.24 Aligned_cols=193 Identities=19% Similarity=0.255 Sum_probs=142.5
Q ss_pred hhcccceeecccceeEEEEEEeCC--CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS--SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~--g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|+..+.||+|+||.||+|.... +..||+|++...........+.+.+|++++. +|+|++++.++ +.....
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~----~~~~~~ 105 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGS----FKDESY 105 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEE----EEeCCE
Confidence 478888999999999999998643 3689999986533223334567889999986 78888888887 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++|+|..++. +||.|++++.++++||+|||+++.....
T Consensus 106 ~~lv~Ey~-~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 106 LYLVLEFV-IGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 99999999 8888887762 6888999999999999999999876432
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.....||+.| .++|||||||++|||+||+.||...... .....+.+.....+ ..
T Consensus 185 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---------~~~~~i~~~~~~~p--~~ 250 (340)
T PTZ00426 185 ---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---------LIYQKILEGIIYFP--KF 250 (340)
T ss_pred ---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---------HHHHHHhcCCCCCC--CC
Confidence 2345678777 5899999999999999999998643211 11112222222111 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
. ...+.+++..|++.+|++|+
T Consensus 251 ~---~~~~~~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 251 L---DNNCKHLMKKLLSHDLTKRY 271 (340)
T ss_pred C---CHHHHHHHHHHcccCHHHcC
Confidence 1 12345778899999999994
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-25 Score=209.11 Aligned_cols=190 Identities=20% Similarity=0.295 Sum_probs=137.6
Q ss_pred eeecccceeEEEEEEe----CCCcEEEEEecccccC-CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 178 YCFGTGGYGSVYIAQL----TSSKVIALKKLHHWEN-EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
+.||+|+||.||+++. .+++.||||.++.... .+......+.+|++++. +|+|++++++. +..+...++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~----~~~~~~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYA----FQTGGKLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeE----EecCCeEEE
Confidence 5799999999999986 3578999999875321 11223456788998886 88888888777 667778899
Q ss_pred hhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 251 MNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
++||+ ++++|..++. +||.|++++.++.+||+|||+++........
T Consensus 78 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 78 ILEYL-SGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred EEeCC-CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc
Confidence 99999 8888876652 7888999999999999999999864333333
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....||..| .++|||||||+++||+||+.||..... ......+......-+ . .
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---------~~~~~~~~~~~~~~~--~---~ 222 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---------KKTIDKILKGKLNLP--P---Y 222 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---------HHHHHHHHcCCCCCC--C---C
Confidence 3445688877 589999999999999999999864321 111222222222111 0 1
Q ss_pred HHHHHHHHHHhhccCCCCCcC
Q 037624 366 DIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm 386 (408)
....+.+++..|++.+|++|+
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~ 243 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRL 243 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcC
Confidence 123456788899999999995
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=207.19 Aligned_cols=200 Identities=18% Similarity=0.294 Sum_probs=146.7
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCC-Cc-chhhHHHHHHHHhc--c-cCCcceeeeEeEeeec
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENE-EP-ASTRSFQNEVDILY--P-KYDIETLLSFMDFVCI 243 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~-~~-~~~~~~~~E~~~l~--~-~~n~~~l~~~~~~~~~ 243 (408)
..+.|...+.||+|+||.||.|.. .+|..||+|.+...... .. ...+...+|+.++. + |||++++..+ ..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev----~~ 90 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV----FA 90 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE----Ee
Confidence 345788889999999999999987 56899999977653211 11 23455668998887 4 7777777666 55
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccC-CceEEeeccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRE-LEAFVADFGMTM 289 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~-~~~ki~DfGla~ 289 (408)
.....++|+||+ .+|+|++++. +|+.|++++.+ +++||+|||++.
T Consensus 91 t~~~~~ivmEy~-~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 91 TPTKIYIVMEYC-SGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred cCCeEEEEEEec-CCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 566699999999 8899998873 79999999988 999999999999
Q ss_pred ccCCCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 290 HLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 290 ~~~~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
..........+.+||+.| .++||||+||+||-|++|+.||+...... ....+.....
T Consensus 170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---------l~~ki~~~~~ 240 (370)
T KOG0583|consen 170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---------LYRKIRKGEF 240 (370)
T ss_pred ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH---------HHHHHhcCCc
Confidence 874333455678899888 68999999999999999999998522111 1112222222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.-+ ... . ...+..++..|++.+|.+|++
T Consensus 241 ~~p--~~~-~-S~~~~~Li~~mL~~~P~~R~t 268 (370)
T KOG0583|consen 241 KIP--SYL-L-SPEARSLIEKMLVPDPSTRIT 268 (370)
T ss_pred cCC--CCc-C-CHHHHHHHHHHcCCCcccCCC
Confidence 211 111 0 344667888999999999944
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=214.88 Aligned_cols=193 Identities=19% Similarity=0.281 Sum_probs=147.6
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
-|...+.||+|+.|.|-.|++ .+|+.+|||.+.+.............+|+-+|. .|+|++.++.. +......|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV----we~~~~ly 88 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV----WENKQHLY 88 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee----eccCceEE
Confidence 466678899999999999998 669999999998764444444566889999886 88888888777 88889999
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++.||+ ++|.|++++. +||.|.+||....+||+|||+|.+-. ...
T Consensus 89 lvlEyv-~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~gk 166 (786)
T KOG0588|consen 89 LVLEYV-PGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV-PGK 166 (786)
T ss_pred EEEEec-CCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc-CCc
Confidence 999999 9999999982 78999999988889999999998753 334
Q ss_pred eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 297 NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 297 ~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
...+-||++.| .++||||.||||+-|+||+.||+..+- ...+..+.......|
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi---------r~LLlKV~~G~f~MP----- 232 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI---------RVLLLKVQRGVFEMP----- 232 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH---------HHHHHHHHcCcccCC-----
Confidence 45667899988 799999999999999999999984321 111222222222111
Q ss_pred HHHHHHHHHHHHhhccCCCCCc
Q 037624 364 VRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..-..++.+|....+..||+.|
T Consensus 233 s~Is~eaQdLLr~ml~VDp~~R 254 (786)
T KOG0588|consen 233 SNISSEAQDLLRRMLDVDPSTR 254 (786)
T ss_pred CcCCHHHHHHHHHHhccCcccc
Confidence 1222334466667788899999
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=209.01 Aligned_cols=189 Identities=19% Similarity=0.246 Sum_probs=134.9
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||||.++..........+.+..|..++. .|+|++++.++ +......++++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~----~~~~~~~~lv~e 76 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCT----FQTKENLFFVME 76 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEE----EEeCCEEEEEEe
Confidence 36999999999999985 47899999997532211223455667777764 78888888777 667778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|+++++++.+||+|||+++...........
T Consensus 77 y~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 77 YL-NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence 99 8888876652 6888888999999999999999864333223344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc--cCCCCCCccchhHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV--LDPRLSPPVDRMVVRD 366 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~ 366 (408)
..||..| .++|||||||++|||+||+.||...... .....+ ..+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---------~~~~~i~~~~~~~~~-------~~ 219 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---------ELFQSIRMDNPCYPR-------WL 219 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhCCCCCCc-------cC
Confidence 5678777 6899999999999999999998642210 001111 1121111 11
Q ss_pred HHHHHHHHHhhccCCCCCcCC
Q 037624 367 IVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 367 ~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.++...|++.+|++|++
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~ 240 (316)
T cd05619 220 TREAKDILVKLFVREPERRLG 240 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCC
Confidence 223557788999999999944
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-25 Score=210.93 Aligned_cols=196 Identities=19% Similarity=0.298 Sum_probs=149.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..|..-..||+|+.|.||.|.- .+++.||||++...... ..+-..+|+.+|. +|+|+|+.+.- +...+..
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~S----ylv~deL 345 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDS----YLVGDEL 345 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHH----hccccee
Confidence 4566668899999999999986 56889999999764322 2455789999997 78888877766 5556889
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
|+||||| ++|+|.+.+. +|..|+++..++.+||+|||++..+.....
T Consensus 346 WVVMEym-~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 346 WVVMEYM-EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred EEEEeec-CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999 9999877662 788899999999999999999999887776
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
..++++||+.| .|+||||+|++++||+-|++||-....+... ..+..---|.+..+ .
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl------yLIa~ng~P~lk~~-----~ 493 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGTPKLKNP-----E 493 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH------HHHhhcCCCCcCCc-----c
Confidence 77889999998 8999999999999999999998643222211 11222222444332 1
Q ss_pred HHHHHHHHHHHhhccCCCCCcC
Q 037624 365 RDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.-...+-+...+|++.||++|.
T Consensus 494 klS~~~kdFL~~cL~~dv~~Ra 515 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRA 515 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCC
Confidence 2223344666789999999993
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=217.28 Aligned_cols=190 Identities=17% Similarity=0.286 Sum_probs=143.1
Q ss_pred ccceeecccceeEEEEEEe-CCCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 175 DIKYCFGTGGYGSVYIAQL-TSSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
...++||+|+||+||||.+ ++|+ +||+|++... ...+...+|..|+-+|+ .|+|+++|+++ |....
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgv----c~~s~- 771 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGV----CMLST- 771 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhh----cccch-
Confidence 3457899999999999987 5554 7899998753 33445788999999998 99999999999 88776
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..+|.+|| +.|.|.+|.. +...|+++.+-.++||.|||+|+.+..
T Consensus 772 ~qlvtq~m-P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 772 LQLVTQLM-PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHHHhc-ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 78999999 9999999984 223344455667899999999999987
Q ss_pred CCCeeeecccCCC-------------C-cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 294 DSSNLTLLAGTYG-------------Y-EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 294 ~~~~~~~~~gt~~-------------y-~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
+....+...|... | .++|||||||.+||++| |..|++.... ..+.+.+...-+-
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~----------~eI~dlle~geRL- 919 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA----------EEIPDLLEKGERL- 919 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH----------HHhhHHHhccccC-
Confidence 7655544333321 2 79999999999999999 9999875421 1122333222221
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..+.-|...+..+++.||..|++.|
T Consensus 920 --sqPpiCtiDVy~~mvkCwmid~~~r 944 (1177)
T KOG1025|consen 920 --SQPPICTIDVYMVMVKCWMIDADSR 944 (1177)
T ss_pred --CCCCCccHHHHHHHHHHhccCcccC
Confidence 2233567778889999999999999
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=207.94 Aligned_cols=189 Identities=19% Similarity=0.224 Sum_probs=136.0
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +|+.||+|.++..........+.+..|..++. .|+++++++++ +......++++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~----~~~~~~~~lv~E 76 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCT----FQTKEHLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEE----EEeCCEEEEEEC
Confidence 46999999999999985 58899999997532212223455677777764 68888888777 667788899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 77 FL-NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 99 8888876552 7889999999999999999998754333333455
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc--CCCCCCccchhHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL--DPRLSPPVDRMVVRD 366 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~ 366 (408)
..||..| .++|||||||+++||+||+.||...... .....+. .+.+.. ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---------~~~~~~~~~~~~~~~-------~~ 219 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---------ELFESIRVDTPHYPR-------WI 219 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhCCCCCCC-------CC
Confidence 6788888 5899999999999999999998632211 0011111 111111 11
Q ss_pred HHHHHHHHHhhccCCCCCcCC
Q 037624 367 IVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 367 ~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.+++..|++.||++|++
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~ 240 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLG 240 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCC
Confidence 223557788999999999954
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=212.73 Aligned_cols=203 Identities=15% Similarity=0.206 Sum_probs=139.5
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.++|+..+.||+|+||.||+|+. .++..||||+++... .....+.+.+|++++. +|+|+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~---- 107 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGA---- 107 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeee----
Confidence 45788889999999999999974 235689999997432 2234567889999986 68888888888
Q ss_pred ecCCccchhhhhhcccchhhhhhh--------------------------------------------------------
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------------- 265 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------------- 265 (408)
+......++++||+ ++|+|..++
T Consensus 108 ~~~~~~~~lv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 186 (375)
T cd05104 108 CTVGGPTLVITEYC-CYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR 186 (375)
T ss_pred eccCCcceeeehhc-cCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence 88888899999999 887775432
Q ss_pred ----------------------------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 266 ----------------------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 266 ----------------------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++||.|++++++..+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 1677888888899999999999986643
Q ss_pred CCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 294 DSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 294 ~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... ....++..| .++|||||||++|||+| |..||...... ......+.......
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~---------~~~~~~~~~~~~~~ 337 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD---------SKFYKMIKEGYRML 337 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch---------HHHHHHHHhCccCC
Confidence 22111 112233334 68999999999999998 88888642111 11111222111110
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
... .....+.+++..||+.||++| |.+++..
T Consensus 338 ~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 338 SPE---CAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred CCC---CCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 001 112356788899999999999 4444433
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-25 Score=207.89 Aligned_cols=192 Identities=18% Similarity=0.240 Sum_probs=135.9
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHH-hc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDI-LY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~-l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
++||+|+||.||+|+.. +|+.||+|.+.............+..|... +. +|+|++++... +......++++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~----~~~~~~~~lv~e 76 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYS----FQTAEKLYFVLD 76 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeE----EEcCCEEEEEEc
Confidence 36999999999999984 588999999875332222334456666543 32 78888888776 677778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++++|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 77 YV-NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 99 8888866541 7888999999999999999999864333333344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||++|||+||+.||..... ......+....+.-+ .....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~~~~~~~~-----~~~~~ 221 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---------SQMYDNILHKPLQLP-----GGKTV 221 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---------HHHHHHHhcCCCCCC-----CCCCH
Confidence 5688877 589999999999999999999864211 111122222222111 01223
Q ss_pred HHHHHHHhhccCCCCCcCCC
Q 037624 369 LVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.+.+++..|++.+|++|++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~ 241 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGA 241 (321)
T ss_pred HHHHHHHHHccCCHhhcCCC
Confidence 46678899999999999553
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=209.44 Aligned_cols=152 Identities=23% Similarity=0.319 Sum_probs=124.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +++.||||++...........+.+.+|++++. +|+|+++++++ +......
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~----~~~~~~~ 76 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYA----FQDDEYL 76 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEE----EEcCCEE
Confidence 36888899999999999999985 48899999997543222334567889999887 78888888877 7778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|..++. ++|.|++++.++.+||+|||+++....
T Consensus 77 ~lv~e~~-~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 77 YLAMEYV-PGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred EEEEeCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999 8988887762 688899999999999999999986543
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......||..| .++|||||||++|||+||+.||..
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 200 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSG 200 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCC
Confidence 22334677766 689999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=205.61 Aligned_cols=192 Identities=20% Similarity=0.239 Sum_probs=137.6
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|... +++.||||.++............+..|.+++. +|+|++++.++ +......++++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~----~~~~~~~~lv~e 76 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSC----FQTKDRLFFVME 76 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeE----EEcCCEEEEEEc
Confidence 46999999999999985 47899999997643223334566778888775 68888888777 667778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++++|..++. ++|.|+++++++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 77 YV-NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 99 8888876552 6788999999999999999999764333222334
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||+||+.||...... .....+.......+ .....
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---------~~~~~i~~~~~~~~-----~~~~~ 221 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---------ELFQSILEDEVRYP-----RWLSK 221 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---------HHHHHHHcCCCCCC-----CcCCH
Confidence 5677777 6899999999999999999998643211 11111221111111 01123
Q ss_pred HHHHHHHhhccCCCCCcCCC
Q 037624 369 LVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.+.+++..|++.||++|++.
T Consensus 222 ~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred HHHHHHHHHccCCHHHcCCC
Confidence 46688889999999999554
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-25 Score=212.24 Aligned_cols=198 Identities=20% Similarity=0.281 Sum_probs=143.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+.. +|+.||||++.............+.+|++++. +|+|+++++.. +..+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~ 76 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYS----FQDEEHL 76 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhh----eecCCeE
Confidence 36888899999999999999985 68899999997543333344567889999886 78888887776 6777889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|..++. +||.|++++.++.+||+|||+++......
T Consensus 77 ~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 77 YLVMEYM-PGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EEEEcCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 9999999 8888877652 78889999999999999999998764332
Q ss_pred -----------------------------CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccccc
Q 037624 296 -----------------------------SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSS 334 (408)
Q Consensus 296 -----------------------------~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~ 334 (408)
.......||..| .++|||||||+++||+||+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 112345688877 689999999999999999999864321
Q ss_pred ccCCccccccchhhhccC--CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 335 LSSSSSSDQNIMLLDVLD--PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 335 ~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. ....+.. ..+..+... .....+.+++..|++ +|++|++
T Consensus 236 ~~---------~~~~i~~~~~~~~~p~~~---~~~~~~~~li~~ll~-dp~~R~~ 277 (350)
T cd05573 236 QE---------TYNKIINWKESLRFPPDP---PVSPEAIDLICRLLC-DPEDRLG 277 (350)
T ss_pred HH---------HHHHHhccCCcccCCCCC---CCCHHHHHHHHHHcc-ChhhcCC
Confidence 11 1111111 111111001 012345577788997 9999955
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-25 Score=202.24 Aligned_cols=193 Identities=19% Similarity=0.209 Sum_probs=135.5
Q ss_pred ecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|+||+||++... +|+.||+|.+...........+.+..|++++. .|+|++.+..+ +..+...++++||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~----~~~~~~~~lv~e~~- 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYA----FQTKTDLCLVMTIM- 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEE----EcCCCeEEEEEeCC-
Confidence 799999999999874 68899999987543333334466788998886 67777776666 66677788999999
Q ss_pred cchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccccCCCCCeee
Q 037624 257 EACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT 299 (408)
Q Consensus 257 ~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~ 299 (408)
++|+|..++. ++|.|+++++++.+||+|||+++..........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK 155 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence 8888864431 678888888999999999999987654333333
Q ss_pred ecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 300 LLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 300 ~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
...||..| .++|||||||++|||+||+.||........ .......+....... .....
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~ 225 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-----NKELKQRILNDSVTY-----PDKFS 225 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-----HHHHHHhhcccCCCC-----cccCC
Confidence 45677777 589999999999999999999864211100 001111222221111 11223
Q ss_pred HHHHHHHHhhccCCCCCcCC
Q 037624 368 VLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+++..|++.||++|++
T Consensus 226 ~~~~~li~~~l~~~P~~R~~ 245 (280)
T cd05608 226 PASKSFCEALLAKDPEKRLG 245 (280)
T ss_pred HHHHHHHHHHhcCCHHHhcC
Confidence 45668888999999999954
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-25 Score=210.98 Aligned_cols=201 Identities=23% Similarity=0.287 Sum_probs=142.7
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
...++|+..+.||+|+||.||+|+.. +++.||+|.+.............+.+|+.++. .|+|++++.++ +..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~----~~~~ 115 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYA----FQDD 115 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEE----EecC
Confidence 35678999999999999999999984 58899999996533222233456788999886 67777777666 6777
Q ss_pred ccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
...++++||+ ++|+|..++. +||.|+++++++.+||+|||+++....
T Consensus 116 ~~~~lv~Ey~-~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 116 KYLYMVMEYM-PGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred CEEEEEEcCC-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 8899999999 8888877652 788999999999999999999987643
Q ss_pred CCC-eeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC--C
Q 037624 294 DSS-NLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP--R 354 (408)
Q Consensus 294 ~~~-~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~--~ 354 (408)
... ......||+.| .++|||||||++|||+||+.||...... .....+.+. .
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---------~~~~~i~~~~~~ 265 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---------GTYSKIMDHKNS 265 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---------HHHHHHHcCCCc
Confidence 221 12345677766 4799999999999999999998643211 112222221 1
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCC--cC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKT--PM 386 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--Rm 386 (408)
+..+. .......+.+++..|++.+|++ |+
T Consensus 266 ~~~~~---~~~~s~~~~~li~~~L~~~p~r~~R~ 296 (370)
T cd05596 266 LTFPD---DIEISKQAKDLICAFLTDREVRLGRN 296 (370)
T ss_pred CCCCC---cCCCCHHHHHHHHHHccChhhccCCC
Confidence 11110 0011234557778899988876 63
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-25 Score=188.24 Aligned_cols=151 Identities=19% Similarity=0.236 Sum_probs=116.8
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|...+.+|+|.||.||+|+. .+|+.||||+++..... ........+||+.|. +|+|++.++.. +.......
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-dGi~~talREIK~Lqel~h~nIi~LiD~----F~~~~~l~ 77 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-DGINRTALREIKLLQELKHPNIIELIDV----FPHKSNLS 77 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-cCccHHHHHHHHHHHHccCcchhhhhhh----ccCCCceE
Confidence 466678899999999999997 56999999999875432 334567789999997 88888888877 66777778
Q ss_pred hhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+|.||| +. +|...+ ++||.|.++.+++..||+|||+|+......
T Consensus 78 lVfEfm-~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 78 LVFEFM-PT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEEEec-cc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 888888 31 222222 289999999999999999999999987655
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
...+..+-|.+| ..+||||.|||+.||+-|.+-+.
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp 203 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP 203 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC
Confidence 443333444444 78999999999999998876554
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-25 Score=210.06 Aligned_cols=188 Identities=18% Similarity=0.201 Sum_probs=137.5
Q ss_pred cceeecccceeEEEEEEeC--CCc--EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 176 IKYCFGTGGYGSVYIAQLT--SSK--VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~--~g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
..++||+|.||.|++|.|. .|+ .||||.++.... .....+|.+|+.+|. +|+|+++|+|+ ..+ ....
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l--~~~mddflrEas~M~~L~H~hliRLyGv----Vl~-qp~m 186 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL--NAIMDDFLREASHMLKLQHPHLIRLYGV----VLD-QPAM 186 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc--chhHHHHHHHHHHHHhccCcceeEEeee----ecc-chhh
Confidence 3477999999999999983 455 589999986332 236789999999987 88888888887 555 6678
Q ss_pred hhhhhcccchhhhhhhcc-----------------------------------CccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMIM-----------------------------------KPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~~-----------------------------------k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+|+|.. +.|+|.+.|.. ...|+++...-.+||+||||.|.+..+
T Consensus 187 MV~ELa-plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 187 MVFELA-PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred HHhhhc-ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 899999 99999998842 233444556678999999999998766
Q ss_pred CCeeeecccC----CCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 295 SSNLTLLAGT----YGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 295 ~~~~~~~~gt----~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
...+.. .+- +.| .+||||+|||.+|||+| |..|+-.. ....+.+.+|.+-+-
T Consensus 266 ed~Yvm-~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~----------~g~qIL~~iD~~erL 334 (1039)
T KOG0199|consen 266 EDMYVM-APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC----------RGIQILKNIDAGERL 334 (1039)
T ss_pred CcceEe-cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC----------CHHHHHHhccccccC
Confidence 544421 110 111 79999999999999999 78886432 122234444432221
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..+..|..++.++++.||..+|++|
T Consensus 335 ---pRPk~csedIY~imk~cWah~paDR 359 (1039)
T KOG0199|consen 335 ---PRPKYCSEDIYQIMKNCWAHNPADR 359 (1039)
T ss_pred ---CCCCCChHHHHHHHHHhccCCcccc
Confidence 2234678889999999999999999
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-25 Score=206.65 Aligned_cols=192 Identities=19% Similarity=0.229 Sum_probs=135.1
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHh-c--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDIL-Y--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l-~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||+||+|+.. +|+.||+|++...........+.+..|...+ . +|+|++++... +......++++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~----~~~~~~~~lv~e 76 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYS----FQTADKLYFVLD 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEE----EEeCCEEEEEEc
Confidence 36999999999999984 6889999999754322222344566665543 2 78888887776 667778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|+++++++.+||+|||+++...........
T Consensus 77 ~~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 77 YV-NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 99 8888876552 7888999999999999999999864333333344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||+||+.||..... ......+........ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~~~~~--~---~~~~ 221 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---------AEMYDNILNKPLRLK--P---NISV 221 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---------HHHHHHHHcCCCCCC--C---CCCH
Confidence 5678777 679999999999999999999863211 011112222211110 0 1123
Q ss_pred HHHHHHHhhccCCCCCcCCC
Q 037624 369 LVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.+.+++..|++.+|++|++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~ 241 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGA 241 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCC
Confidence 45678889999999999554
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-25 Score=208.28 Aligned_cols=190 Identities=18% Similarity=0.235 Sum_probs=137.2
Q ss_pred eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
+.||+|+||.||++.. .+|+.||+|.+.............+.+|++++. +|+|++++..+ +......++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~----~~~~~~~~lv~E~ 76 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS----FQTHDRLCFVMEY 76 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEE----EEcCCEEEEEEeC
Confidence 3699999999999987 468899999997643333334566788888886 78888887776 6777788999999
Q ss_pred cccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 255 RGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 255 ~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
+ ++|+|..++. +||.|+++++++.+||+|||+++...........
T Consensus 77 ~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 77 A-NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred C-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence 9 8888866552 6889999999999999999999864333333344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||+||+.||..... ......+.......+ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---------~~~~~~i~~~~~~~p--~---~~~~ 221 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EKLFELILMEEIRFP--R---TLSP 221 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---------HHHHHHHhcCCCCCC--C---CCCH
Confidence 5688877 689999999999999999999853211 111111111111111 0 1123
Q ss_pred HHHHHHHhhccCCCCCcC
Q 037624 369 LVSTILFACLRSNPKTPM 386 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm 386 (408)
.+.+++..|++.||++|+
T Consensus 222 ~~~~li~~~L~~dP~~R~ 239 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRL 239 (325)
T ss_pred HHHHHHHHHhhcCHHHhC
Confidence 456778899999999995
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=205.74 Aligned_cols=198 Identities=18% Similarity=0.267 Sum_probs=138.3
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||+|.++..........+.+.+|+.++. .|++++.+.++ +......++++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~----~~~~~~~~lv~e 76 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSC----FQTTSRLFLVIE 76 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEE----EEeCCEEEEEEe
Confidence 46999999999999984 57899999997643333344566888888875 57777777666 666778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 77 YV-NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 99 8888876541 7889999999999999999999864333333345
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||+||+.||+....-... .........+.......+ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~p--~---~~~~ 228 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM--NTEDYLFQVILEKPIRIP--R---FLSV 228 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc--ccHHHHHHHHHhCCCCCC--C---CCCH
Confidence 6788887 5899999999999999999999642211100 000011111222222111 1 1123
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..|++.||++|++
T Consensus 229 ~~~~li~~~L~~dP~~R~~ 247 (327)
T cd05617 229 KASHVLKGFLNKDPKERLG 247 (327)
T ss_pred HHHHHHHHHhccCHHHcCC
Confidence 3567888999999999955
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=203.46 Aligned_cols=150 Identities=23% Similarity=0.268 Sum_probs=120.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+++.. +|..||+|.+.... .....+.+.+|++++. +|+|++++.++ +..+...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 78 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGA----FYSDGEI 78 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEE----EEECCEE
Confidence 57888899999999999999985 58889999987532 2234567999999996 78888877777 6667788
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. +||.|++++.++.+||+|||+++.....
T Consensus 79 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 79 SICMEHM-DGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEEeecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999 8888876652 6788888999999999999999865322
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
......||..| .++|||||||++|||+||+.||.
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 12334577766 68999999999999999999985
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-25 Score=206.97 Aligned_cols=208 Identities=19% Similarity=0.287 Sum_probs=143.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhH--HHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRS--FQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~--~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
.+.|...+.||.|.||.||+|+- ..|..||||+|+..... .++ =.+|++.|. .|+|+++|... +...
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s----~ee~~nLREvksL~kln~hpniikL~Ev---i~d~ 81 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS----WEECMNLREVKSLRKLNPHPNIIKLKEV---IRDN 81 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc----HHHHHHHHHHHHHHhcCCCCcchhhHHH---hhcc
Confidence 35677789999999999999997 56889999999864322 222 368998885 36666666555 3344
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+...++|+|||. .+|++.+. +||+|+++.....+||+|||+||.
T Consensus 82 ~~~L~fVfE~Md--~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 82 DRILYFVFEFMD--CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred CceEeeeHHhhh--hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccc
Confidence 448999999993 45665552 799999999889999999999999
Q ss_pred cCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCC-----------cccccc-c
Q 037624 291 LYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS-----------SSSDQN-I 345 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~-----------~~~~~~-~ 345 (408)
.... ...|..+.|.+| .+.|+||+|||++|+.+-++-|.....++.. +..+.. .
T Consensus 160 v~Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 160 VRSK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred cccC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 8543 345667778887 7899999999999999998877644332221 011111 1
Q ss_pred hhhhccC---CCCCCc-cchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 346 MLLDVLD---PRLSPP-VDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 346 ~~~~~~d---~~l~~~-~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.+...+. |...+. .......+..+.++++..|++.||++|+++
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA 285 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTA 285 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccH
Confidence 1222222 222211 111122356678899999999999999553
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=221.09 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=143.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +|+.||+|++...........+.|.+|++++. +|+|+++++++ +..++..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v----~~d~~~l 77 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSI----CSDGDPV 77 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEE----EeeCCEE
Confidence 46888899999999999999974 58899999997543333445678999999987 88888888887 7777888
Q ss_pred hhhhhhcccchhhhhhh--------------------------------------------ccCccccccccCCceEEee
Q 037624 249 WFMNTWRGEACSVFCTM--------------------------------------------IMKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l--------------------------------------------~~k~~~~~l~~~~~~ki~D 284 (408)
++++||+ ++++|.+++ ++||.|++++.++.+||+|
T Consensus 78 yLVMEY~-eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 78 YYTMPYI-EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEEEcC-CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence 9999999 888775432 1789999999999999999
Q ss_pred cccccccCCCCC------------------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccccc
Q 037624 285 FGMTMHLYCDSS------------------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSS 334 (408)
Q Consensus 285 fGla~~~~~~~~------------------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~ 334 (408)
||+++....... .....+||+.| .++|||||||+++||+||+.||.....
T Consensus 157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~ 236 (932)
T PRK13184 157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG 236 (932)
T ss_pred cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence 999987621110 01124688888 689999999999999999999864211
Q ss_pred ccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 335 LSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 335 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
... .. ...+.+|.-..+ ..+....+.+++..|++.||++|+
T Consensus 237 ~ki----~~---~~~i~~P~~~~p----~~~iP~~L~~LI~rcL~~DP~kR~ 277 (932)
T PRK13184 237 RKI----SY---RDVILSPIEVAP----YREIPPFLSQIAMKALAVDPAERY 277 (932)
T ss_pred hhh----hh---hhhccChhhccc----cccCCHHHHHHHHHHccCChhhCc
Confidence 000 00 011111111110 012234567888999999999993
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=209.08 Aligned_cols=155 Identities=23% Similarity=0.334 Sum_probs=123.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+.. +|+.||||++.............+.+|++++. +|+|+++++++ +..+...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~----~~~~~~~ 76 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYS----FQDENYL 76 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEE----EEcCCeE
Confidence 46888999999999999999984 58899999997543223334566888999986 77787777776 7778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|++++.++.+||+|||+++.+....
T Consensus 77 ~lv~E~~-~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 77 YLIMEYL-PGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred EEEECCC-CCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999 8888887662 78899999999999999999997643211
Q ss_pred C--------------------------------------eeeecccCCCC------------cccchhhhhHHHHHHHhC
Q 037624 296 S--------------------------------------NLTLLAGTYGY------------EKCDVYSFGVVALEILMG 325 (408)
Q Consensus 296 ~--------------------------------------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg 325 (408)
. .....+||+.| .++|||||||+++||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 0 00124688888 689999999999999999
Q ss_pred CCCCcc
Q 037624 326 RQPGEL 331 (408)
Q Consensus 326 ~~p~~~ 331 (408)
+.||..
T Consensus 236 ~~Pf~~ 241 (364)
T cd05599 236 YPPFCS 241 (364)
T ss_pred CCCCCC
Confidence 999864
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=196.28 Aligned_cols=196 Identities=18% Similarity=0.263 Sum_probs=142.5
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||+|+.. +++.||+|.+.... ......+.+.+|++++. +|+|+++++++ +......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-MNRREREEAIDEARVLAKLDSSYIIRYYES----FLDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-CCHHHHHHHHHHHHHHHhcCCCCeehheee----eccCCEEE
Confidence 4677889999999999999984 58899999986532 22345678899999886 78888777777 77778889
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. +++.|+++++++.+||+|||+++.....
T Consensus 76 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 76 IVMEYA-ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred EEEEeC-CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 999999 8888876652 6778888889999999999999876543
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++|||||||+++||+||+.||..... ......+....... .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~----~ 221 (256)
T cd08529 155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---------GALILKIIRGVFPP----V 221 (256)
T ss_pred cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHcCCCCC----C
Confidence 3222334566555 689999999999999999999864321 11111122111111 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+||+.+|++|++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~ 246 (256)
T cd08529 222 SQMYSQQLAQLIDQCLTKDYRQRPD 246 (256)
T ss_pred ccccCHHHHHHHHHHccCCcccCcC
Confidence 1123345778889999999999944
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=197.73 Aligned_cols=193 Identities=19% Similarity=0.319 Sum_probs=136.9
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||.||+|.+.++..+|+|.+.... ...++|.+|++++. +|+|++++.++ +......+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 75 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA----MSEEDFIEEAKVMMKLSHPKLVQLYGV----CTQQKPLY 75 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC----ccHHHHHHHHHHHHHCCCCCceeEEEE----EccCCCEE
Confidence 5688889999999999999999888889999986422 22467889999986 78887777777 77777889
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++|+|.+++. ++|.|+++++++.+||+|||+++......
T Consensus 76 iv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 76 IVTEFM-ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEEEcC-CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999 8888876652 57778888899999999999998653221
Q ss_pred Cee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCC-CCCCccc
Q 037624 296 SNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDP-RLSPPVD 360 (408)
Q Consensus 296 ~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~ 360 (408)
... ....++..| .++|||||||+++||+| |+.||...... ..+..+... ....+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---------~~~~~i~~~~~~~~~-- 223 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---------EVVEMISRGFRLYRP-- 223 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---------HHHHHHHCCCCCCCC--
Confidence 111 111222233 68999999999999999 89998632211 111111111 11111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++.+||+.+|++|++
T Consensus 224 ~---~~~~~~~~li~~c~~~~p~~Rps 247 (256)
T cd05114 224 K---LASMTVYEVMYSCWHEKPEGRPT 247 (256)
T ss_pred C---CCCHHHHHHHHHHccCCcccCcC
Confidence 0 11235778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=201.26 Aligned_cols=199 Identities=17% Similarity=0.175 Sum_probs=138.8
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++.. .+++.||||++.............+.+|+.++. +|+|++.+.+. +..+...+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~ 76 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA----YETKDALC 76 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeee----ecCCCeEE
Confidence 367788999999999999997 468899999997533222233456788999885 67777776666 66677889
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|..++. ++|.|+++++++.++|+|||+++.....
T Consensus 77 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 77 LVLTLM-NGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred EEEecc-CCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999 8888865541 6777888889999999999999875432
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
. ......||..| .++|||||||+++||++|+.||....... ....+...+..... ..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~----~~ 224 (285)
T cd05605 156 E-TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV------KREEVERRVKEDQE----EY 224 (285)
T ss_pred C-ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh------HHHHHHHHhhhccc----cc
Confidence 2 22334567666 57999999999999999999986421100 00011111111111 00
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.||++|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLG 249 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcC
Confidence 1112334668889999999999953
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=197.92 Aligned_cols=201 Identities=19% Similarity=0.244 Sum_probs=141.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|... +|+.||+|.++.....+....+.+.+|++++. .|++++.++++ +..+...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~----~~~~~~~ 77 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLAS----FIENNEL 77 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeee----eecCCeE
Confidence 57888899999999999999986 78999999987543333444678999999986 67777777766 5666788
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ ++++|..++. ++|.|++++.++.++|+|||+++..
T Consensus 78 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 78 NIVLELA-DAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEecC-CCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 8999999 8888765541 6778888999999999999999866
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...........|+..| .++|||||||++|||++|+.|+..... ....+.+........+.
T Consensus 157 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 228 (267)
T cd08224 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--------NLYSLCKKIEKCDYPPL 228 (267)
T ss_pred cCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc--------cHHHHHhhhhcCCCCCC
Confidence 4332222334456555 579999999999999999999853210 00001111111111110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .......+.+++..||+.+|++|++
T Consensus 229 ~--~~~~~~~~~~~i~~cl~~~p~~Rp~ 254 (267)
T cd08224 229 P--ADHYSEELRDLVSRCINPDPEKRPD 254 (267)
T ss_pred C--hhhcCHHHHHHHHHHcCCCcccCCC
Confidence 0 0122345668889999999999944
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=197.68 Aligned_cols=199 Identities=18% Similarity=0.243 Sum_probs=138.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+.++. +|+|++++.+. +..+...
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~----~~~~~~~ 81 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGS----YLSREKL 81 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEE----EEeCCEE
Confidence 4688889999999999999997 568899999986432 123456788998886 78888888777 6677788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++......
T Consensus 82 ~iv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 82 WICMEYC-GGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 8999999 8888876542 57788888899999999999998654322
Q ss_pred CeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 SNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.......|+..| .++|||||||+++||+||+.|+............. ......+....
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~--- 233 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS----KSNFQPPKLKD--- 233 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee----cCCCCCCCCcc---
Confidence 111223344444 47999999999999999999985332111100000 00111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 234 --~~~~~~~~~~li~~~l~~~P~~Rp~ 258 (267)
T cd06646 234 --KTKWSSTFHNFVKISLTKNPKKRPT 258 (267)
T ss_pred --ccccCHHHHHHHHHHhhCChhhCcC
Confidence 1112345678889999999999944
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=202.95 Aligned_cols=203 Identities=19% Similarity=0.225 Sum_probs=135.1
Q ss_pred hhcccceeecccceeEEEEEEeCC-----------------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-----------------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIE 232 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-----------------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~ 232 (408)
++|...+.||+|+||.||+|.+.+ +..||+|.+.... ......+|.+|++++. +|+|++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 467778999999999999998632 3379999987532 2234567999999887 888888
Q ss_pred eeeeEeEeeecCCccchhhhhhcccchhhhhhh-----------------------------------------------
Q 037624 233 TLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM----------------------------------------------- 265 (408)
Q Consensus 233 ~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l----------------------------------------------- 265 (408)
+++++ +......++++||+ ++++|.+++
T Consensus 83 ~~~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 83 RLLGV----CVDEDPLCMITEYM-ENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred EEEEE----EecCCceEEEEecC-CCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 88887 77777889999999 887775432
Q ss_pred -----ccCccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh--
Q 037624 266 -----IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-- 324 (408)
Q Consensus 266 -----~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-- 324 (408)
++||.|+++++++.+||+|||+++........ .....++..| .++|||||||+++||++
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 16888888999999999999999865432211 1112334444 68999999999999997
Q ss_pred CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 325 GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 325 g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+..|+........ .....+................+...+.+++..||+.+|++|++
T Consensus 238 ~~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs 294 (304)
T cd05096 238 KEQPYGELTDEQV------IENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS 294 (304)
T ss_pred CCCCCCcCCHHHH------HHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC
Confidence 5566653211100 00000111100000000001123446788999999999999944
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=198.87 Aligned_cols=201 Identities=19% Similarity=0.236 Sum_probs=140.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+. .+++.||||.+......+......|.+|++++. +|+|+++++++ +......
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 77 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDS----FIEDNEL 77 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeee----EEECCeE
Confidence 4788889999999999999997 468899999886543334445567899999986 77887777776 5556677
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ ++++|..++. ++|.|++++.++.++|+|||+++..
T Consensus 78 ~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 78 NIVLELA-DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEec-CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 8899998 7777765431 6778888889999999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...........|+..| .++|||||||++|||+||+.|+..... ......+.+.....++
T Consensus 157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~- 227 (267)
T cd08228 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--------NLFSLCQKIEQCDYPP- 227 (267)
T ss_pred cchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc--------cHHHHHHHHhcCCCCC-
Confidence 4332222233455555 579999999999999999999753210 0001111111111111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..||+.+|++|++
T Consensus 228 -~~~~~~~~~~~~li~~cl~~~p~~Rp~ 254 (267)
T cd08228 228 -LPTEHYSEKLRELVSMCIYPDPDQRPD 254 (267)
T ss_pred -CChhhcCHHHHHHHHHHCCCCcccCcC
Confidence 001123345778889999999999944
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.5e-25 Score=207.08 Aligned_cols=190 Identities=21% Similarity=0.284 Sum_probs=137.3
Q ss_pred eeecccceeEEEEEEe----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 178 YCFGTGGYGSVYIAQL----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+.||+|+||.||+++. .+|+.||+|++..... .......+.+|++++. +|+|++++.++ +..+...+++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYA----FQTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEE----EEcCCEEEEE
Confidence 5799999999999875 3578999999975322 1223455778998886 78888888777 6677888999
Q ss_pred hhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCee
Q 037624 252 NTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL 298 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~ 298 (408)
+||+ ++++|..++. ++|.|+++++++.+||+|||+++.........
T Consensus 77 ~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~ 155 (318)
T cd05582 77 LDFL-RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 155 (318)
T ss_pred EcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce
Confidence 9999 8888876652 68888899999999999999998764433333
Q ss_pred eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHH
Q 037624 299 TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366 (408)
Q Consensus 299 ~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 366 (408)
....||..| .++|||||||+++||+||+.||..... ......+......-+ . ..
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---------~~~~~~i~~~~~~~p--~---~~ 221 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---------KETMTMILKAKLGMP--Q---FL 221 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---------HHHHHHHHcCCCCCC--C---CC
Confidence 445678777 689999999999999999999864221 111122222221111 0 11
Q ss_pred HHHHHHHHHhhccCCCCCcCC
Q 037624 367 IVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 367 ~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.+++..|++.||++|++
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~ 242 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLG 242 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCC
Confidence 233557788999999999954
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-25 Score=201.77 Aligned_cols=192 Identities=21% Similarity=0.324 Sum_probs=131.5
Q ss_pred cceeecccceeEEEEEEeC-----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 176 IKYCFGTGGYGSVYIAQLT-----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..+.||.|.||.||+|.+. .+..|+||.++.. ......+.|.+|++.+. +|+|+++++++ |......
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~----~~~~~~~ 76 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGF----CIENEPL 76 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEE----EESSSSE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccc----ccccccc
Confidence 4578999999999999986 2568999999642 22334688999999887 89999998888 7777778
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.+++||+ ++|+|.+++. +++.|+++++++.+||+|||+++....
T Consensus 77 ~lv~e~~-~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 77 FLVMEYC-PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEEEE---TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred ccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999 8999988773 455666788899999999999987632
Q ss_pred CCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 294 DSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 294 ~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... ....+...| .++||||||+++|||+| |+.|+.... .......+.+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~---------~~~~~~~~~~~~~~~- 225 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD---------NEEIIEKLKQGQRLP- 225 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC---------HHHHHHHHHTTEETT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------cccccccccccccce-
Confidence 22111 111223333 69999999999999999 788875321 111112222221111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+...+.+++..||+.+|++|++
T Consensus 226 ---~~~~~~~~~~~li~~C~~~~p~~RPs 251 (259)
T PF07714_consen 226 ---IPDNCPKDIYSLIQQCWSHDPEKRPS 251 (259)
T ss_dssp ---SBTTSBHHHHHHHHHHT-SSGGGS--
T ss_pred ---eccchhHHHHHHHHHHcCCChhhCcC
Confidence 11123445678899999999999943
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-25 Score=200.07 Aligned_cols=195 Identities=19% Similarity=0.358 Sum_probs=136.0
Q ss_pred hcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCc-cchh
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDA-CFWF 250 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~-~~~l 250 (408)
++...+.||+|+||+||++...+ |...|||.+..... ...+.+.+|+.+|. ..++++++.+++....... .+.+
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~-~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILS-RLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHH-hCCCCCEEeeCCccccccCeeeEe
Confidence 46667889999999999999854 88999999976421 11677899999996 3335555555443222333 6889
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCcccccccc-CCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLR-ELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~-~~~~ki~DfGla~~~~~~~ 295 (408)
.+||+ ++|+|.+.+. +|+.|++++. ++.+||+|||+++......
T Consensus 94 ~mEy~-~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 94 FMEYA-PGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeecc-CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 99999 9999888662 7899999998 7999999999998876311
Q ss_pred ---CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc----cCCCC
Q 037624 296 ---SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV----LDPRL 355 (408)
Q Consensus 296 ---~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~d~~l 355 (408)
.......||+.| .++||||+||+++||+||++|+..... ....+..+ .-|.+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~--------~~~~~~~ig~~~~~P~i 244 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE--------EAEALLLIGREDSLPEI 244 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc--------hHHHHHHHhccCCCCCC
Confidence 112346788777 389999999999999999999764200 00001111 11222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+. ...++ ..+....|++.+|++|.+
T Consensus 245 p~----~ls~~---a~~Fl~~C~~~~p~~Rpt 269 (313)
T KOG0198|consen 245 PD----SLSDE---AKDFLRKCFKRDPEKRPT 269 (313)
T ss_pred Cc----ccCHH---HHHHHHHHhhcCcccCcC
Confidence 21 12233 345567899999999943
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=207.28 Aligned_cols=161 Identities=25% Similarity=0.355 Sum_probs=127.3
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
++....++|+..+.||+|+||.||+++.. +++.||+|.+...........+.+.+|+.++. .|+|++++.++ +
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~----~ 112 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA----F 112 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEE----E
Confidence 34445678999999999999999999985 57899999986533222233456788888886 78888877777 6
Q ss_pred cCCccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
..+...++++||+ ++|+|..++. +||.|+++++++.+||+|||+++.
T Consensus 113 ~~~~~~~lv~Ey~-~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 113 QDDKYLYMVMEYM-PGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EcCCEEEEEEcCC-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 7778899999999 8898877652 789999999999999999999987
Q ss_pred cCCCCC-eeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSS-NLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~-~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...... ......||.+| .++||||+||+++||+||+.||..
T Consensus 192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred cccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 643222 12345678777 479999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=207.41 Aligned_cols=163 Identities=24% Similarity=0.351 Sum_probs=129.5
Q ss_pred HHHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEe
Q 037624 164 FGDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDF 240 (408)
Q Consensus 164 ~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~ 240 (408)
+.++....++|...+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|+.++. +|+|++++.+.
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~--- 111 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA--- 111 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE---
Confidence 4455666789999999999999999999985 57899999986533222233456778888886 78888888777
Q ss_pred eecCCccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
+..+...++++||+ ++|+|..++. +||.|++++.++++||+|||++
T Consensus 112 -~~~~~~~~lv~Ey~-~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 112 -FQDDRYLYMVMEYM-PGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred -EEcCCEEEEEEcCC-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 67778899999999 8888876652 7889999999999999999999
Q ss_pred cccCCCCC-eeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSS-NLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~-~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+....... ......||+.| .++|||||||++|||++|+.||..
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 87643322 12345677777 479999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=207.81 Aligned_cols=154 Identities=22% Similarity=0.296 Sum_probs=122.5
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|...+.||+|+||+||+|+. .+++.||||++...........+.+.+|++++. +|+|+++++++ +.+....+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~----~~~~~~~~ 77 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYS----FQDKDNLY 77 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEE----EecCCEEE
Confidence 577889999999999999987 458899999997643333344567889999886 78888887777 67778899
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC-
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS- 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~- 295 (408)
+++||+ ++|+|..++. +||.|++++.++++||+|||+++......
T Consensus 78 lv~E~~-~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 78 FVMDYI-PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred EEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999 8998877652 78999999999999999999986431100
Q ss_pred ----------------------------------------------CeeeecccCCCC------------cccchhhhhH
Q 037624 296 ----------------------------------------------SNLTLLAGTYGY------------EKCDVYSFGV 317 (408)
Q Consensus 296 ----------------------------------------------~~~~~~~gt~~y------------~k~DVySfGv 317 (408)
......+||..| .++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 001234688888 6899999999
Q ss_pred HHHHHHhCCCCCcc
Q 037624 318 VALEILMGRQPGEL 331 (408)
Q Consensus 318 vl~Elltg~~p~~~ 331 (408)
+++||+||+.||..
T Consensus 237 il~elltG~~Pf~~ 250 (381)
T cd05626 237 ILFEMLVGQPPFLA 250 (381)
T ss_pred HHHHHHhCCCCCcC
Confidence 99999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=207.86 Aligned_cols=199 Identities=16% Similarity=0.222 Sum_probs=137.8
Q ss_pred HHhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
.-++|+..+.||+|+||.||+|+. .++..||||+++.... ......+.+|++++. +|+|+++++++
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~--- 110 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGA--- 110 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeE---
Confidence 345788889999999999999974 2245799999975322 223567889999886 68888888887
Q ss_pred eecCCccchhhhhhcccchhhhhhh-------------------------------------------------------
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTM------------------------------------------------------- 265 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------------- 265 (408)
+......++++||+ ++|+|.+++
T Consensus 111 -~~~~~~~~lv~ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 111 -CTHGGPVLVITEYC-CYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred -ecCCCCeEEeHhhc-cCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 78888889999999 777775432
Q ss_pred ------------------------------------------------ccCccccccccCCceEEeecccccccCCCCCe
Q 037624 266 ------------------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 266 ------------------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
++||.|+++++++++||+|||+++........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 16788888889999999999999865433211
Q ss_pred e--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 298 L--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 298 ~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
. ....++..| .++|||||||++|||+| |+.||...... ......+..........
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~---------~~~~~~~~~~~~~~~~~- 338 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN---------SKFYKMVKRGYQMSRPD- 338 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc---------HHHHHHHHcccCccCCC-
Confidence 1 112233344 68999999999999998 99998643210 01111121111111001
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|++|++
T Consensus 339 --~~~~~l~~li~~cl~~dp~~RPs 361 (374)
T cd05106 339 --FAPPEIYSIMKMCWNLEPTERPT 361 (374)
T ss_pred --CCCHHHHHHHHHHcCCChhhCcC
Confidence 11245678888999999999944
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=198.15 Aligned_cols=197 Identities=16% Similarity=0.182 Sum_probs=138.0
Q ss_pred HhhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.++|+..+.||+|+||.||+|.+. .+..||+|.++... .....+.|.+|+.++. +|+|++++.++ +..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~ 77 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGV----ITR 77 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEE----Eec
Confidence 356888899999999999999863 35689999997532 2234567999999987 78888888877 677
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+...++++||+ ++|+|..++. ++|.|++++.++++|++|||.+..
T Consensus 78 ~~~~~lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 78 GNTMMIVTEYM-SNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred CCCcEEEEEeC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 78899999999 8888877652 678888899999999999998765
Q ss_pred cCCCCCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 291 LYCDSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 291 ~~~~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
........ ....++..| .++|||||||+++|+++ |+.||...... ..+..+.+. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---------~~~~~~~~~-~~ 226 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---------DVIKAVEDG-FR 226 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---------HHHHHHHCC-CC
Confidence 42221110 111223333 68999999999999775 99998643211 111111111 11
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+ .+..+...+.+++..||+.+|++|++
T Consensus 227 ~~---~~~~~~~~~~~li~~c~~~~p~~RP~ 254 (266)
T cd05064 227 LP---APRNCPNLLHQLMLDCWQKERGERPR 254 (266)
T ss_pred CC---CCCCCCHHHHHHHHHHcCCCchhCCC
Confidence 10 01123455778889999999999944
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=191.07 Aligned_cols=158 Identities=21% Similarity=0.228 Sum_probs=120.8
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
+..++|+..+.|++|.||.||+|+. ++++.||+|+++... +....--.-.+||.+|. +|+|||++-...- -.+-
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVv--G~~~ 149 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVV--GSNM 149 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEe--cccc
Confidence 3456788889999999999999998 568899999998754 33333445679999986 7888777765521 2233
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+..++||||+ +. +|...++ +|+.|.++...|..||+|||+||.+
T Consensus 150 d~iy~VMe~~-Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 150 DKIYIVMEYV-EH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred ceeeeeHHHH-Hh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhh
Confidence 4589999998 42 3333331 7888888999999999999999998
Q ss_pred CCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.......+..+=|.+| +..|+||+|||+.|++++++-|..
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G 280 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG 280 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC
Confidence 7665555555556666 789999999999999999987753
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=213.42 Aligned_cols=206 Identities=19% Similarity=0.173 Sum_probs=138.8
Q ss_pred HHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.....++|...+.||+|+||+||+|+. .+|+.||||.+.... ........+.+|+.++. .|+|+++....+.....
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEG-MSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEeccc-CCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 334456899999999999999999986 568999999987532 22334567889999884 45555444333111000
Q ss_pred ----CCccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEE
Q 037624 244 ----KDACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFV 282 (408)
Q Consensus 244 ----~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki 282 (408)
.....++++||+ ++|+|.+++. +||.|++++.++.+||
T Consensus 106 ~~~~~~~~i~lV~Ey~-~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 106 RNPENVLMIALVLDYA-NAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cCcccceEEEEEEeCC-CCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEE
Confidence 011356889999 8888865441 7889999999999999
Q ss_pred eecccccccCCCC--CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhh
Q 037624 283 ADFGMTMHLYCDS--SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 283 ~DfGla~~~~~~~--~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
+|||+++...... .......||+.| .++|||||||++|||+||+.||..... ...+.
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~---------~~~~~ 255 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM---------EEVMH 255 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---------HHHHH
Confidence 9999998764321 112345788887 689999999999999999999863211 01111
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+......+ .+......+.+++..||+.+|++|++
T Consensus 256 ~~~~~~~~~----~~~~~~~~l~~li~~~L~~dP~~RPs 290 (496)
T PTZ00283 256 KTLAGRYDP----LPPSISPEMQEIVTALLSSDPKRRPS 290 (496)
T ss_pred HHhcCCCCC----CCCCCCHHHHHHHHHHcccChhhCcC
Confidence 111111110 00112334668889999999999933
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-24 Score=202.67 Aligned_cols=195 Identities=16% Similarity=0.280 Sum_probs=135.8
Q ss_pred hhcccceeecccceeEEEEEEeC-CCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.+|+..+.||+|+||.||+|++. +|+ .||+|.++.. ......++|.+|+.++. .|+|+++++++ |..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~----~~~ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGI----CLT 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EcC
Confidence 46888999999999999999863 344 3899998642 22334567889999887 88998888887 655
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
. ...++++|+ ++|++.+++. +||.|+++++++.+||+|||+++.
T Consensus 81 ~-~~~~v~e~~-~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 81 S-TVQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred C-CceeeeecC-CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccc
Confidence 4 456788888 7888776552 788899999999999999999997
Q ss_pred cCCCCCeee--ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSNLT--LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~~~--~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
........+ ...++..| .++|||||||++|||+| |+.|++..... .+..++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~----------~~~~~~~~~~ 228 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----------EISSILEKGE 228 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----------HHHHHHhCCC
Confidence 654332211 11223344 68999999999999998 99998643111 1112221111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. ...+...+.+++..||+.+|++|++
T Consensus 229 ~~~~---~~~~~~~~~~li~~cl~~~p~~Rps 257 (316)
T cd05108 229 RLPQ---PPICTIDVYMIMVKCWMIDADSRPK 257 (316)
T ss_pred CCCC---CCCCCHHHHHHHHHHccCChhhCcC
Confidence 1110 0122345678899999999999933
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-24 Score=204.48 Aligned_cols=191 Identities=19% Similarity=0.228 Sum_probs=134.8
Q ss_pred eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+. .+|+.||+|++...........+.+..|..++. +|+|++++... +......++++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~----~~~~~~~~lv~e 76 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYS----FQTTEKLYFVLD 76 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEE----EecCCEEEEEEc
Confidence 3699999999999987 468899999997543223333456666665432 78888887766 667778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|++..++. +||.|+++++++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 77 FV-NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred CC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence 99 8888876652 7888999999999999999999864333333344
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||++|+.||...... .....+....+... . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---------~~~~~~~~~~~~~~--~---~~~~ 221 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA---------EMYDNILHKPLVLR--P---GASL 221 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH---------HHHHHHHcCCccCC--C---CCCH
Confidence 5678777 6899999999999999999998632111 11112222111110 0 1123
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..|++.+|.+|++
T Consensus 222 ~~~~ll~~ll~~~p~~R~~ 240 (325)
T cd05604 222 TAWSILEELLEKDRQRRLG 240 (325)
T ss_pred HHHHHHHHHhccCHHhcCC
Confidence 3557788999999999943
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-24 Score=204.45 Aligned_cols=191 Identities=18% Similarity=0.221 Sum_probs=133.6
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHh-c--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDIL-Y--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l-~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +++.||+|.+.............+..|...+ . +|+|++++... +...+..++++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~----~~~~~~~~lv~e 76 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS----FQTADKLYFVLD 76 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEE----EEcCCeEEEEEe
Confidence 36999999999999985 5778999998753222222234455555433 2 78888888777 667778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++++|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 77 YI-NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 99 8888876552 7889999999999999999999865333333345
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..||..| .++|||||||+++||++|+.||...... .....+........ . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~i~~~~~~~~--~---~~~~ 221 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---------EMYDNILNKPLQLK--P---NITN 221 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH---------HHHHHHHhCCcCCC--C---CCCH
Confidence 6788888 6899999999999999999998632211 11112222111110 0 1122
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.++...|++.+|.+|++
T Consensus 222 ~~~~li~~~l~~~p~~R~~ 240 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLG 240 (325)
T ss_pred HHHHHHHHHcccCHHHCCC
Confidence 3557778999999999944
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-24 Score=208.57 Aligned_cols=198 Identities=17% Similarity=0.253 Sum_probs=137.6
Q ss_pred HhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.+.|...+.||+|+||.||+|+.. .+..||||++.... .....+.|.+|++++. .|+|+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~---- 109 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGA---- 109 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEE----
Confidence 457788899999999999999852 13469999996532 2234567999999987 48888888888
Q ss_pred ecCCccchhhhhhcccchhhhhhh--------------------------------------------------------
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------------- 265 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------------- 265 (408)
+......++++||+ ++|+|.+++
T Consensus 110 ~~~~~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 110 CTKSGPIYIITEYC-FYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EccCCceEEEEEec-CCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 88888899999999 888775432
Q ss_pred -------------------------------------------------------------------------ccCcccc
Q 037624 266 -------------------------------------------------------------------------IMKPLSW 272 (408)
Q Consensus 266 -------------------------------------------------------------------------~~k~~~~ 272 (408)
+++|.|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 1567778
Q ss_pred ccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccC
Q 037624 273 IGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSS 337 (408)
Q Consensus 273 ~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~ 337 (408)
++++++.+||+|||+++........ .....++..| .++|||||||++|||++ |+.|+.....
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~--- 345 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV--- 345 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch---
Confidence 8888999999999999865432211 1122334444 68999999999999997 9999863211
Q ss_pred CccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 338 SSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 338 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+......+ ........+.+++..||+.+|++|++
T Consensus 346 ------~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt 386 (400)
T cd05105 346 ------DSTFYNKIKSGYRMA---KPDHATQEVYDIMVKCWNSEPEKRPS 386 (400)
T ss_pred ------hHHHHHHHhcCCCCC---CCccCCHHHHHHHHHHCccCHhHCcC
Confidence 000111111111110 01123456778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-24 Score=208.25 Aligned_cols=155 Identities=23% Similarity=0.317 Sum_probs=122.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||++.. .+|+.||||++...........+.+.+|++++. .|+|+++++++ +.++...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~----~~~~~~~ 76 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYS----FQDAQYL 76 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEE----EEcCCee
Confidence 4688889999999999999987 468899999986533222334567888999986 78887777776 6778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|..++. +||.|++++.++++||+|||+++......
T Consensus 77 ~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 77 YLIMEFL-PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred EEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999 8998877652 78999999999999999999996432100
Q ss_pred C-----------------------------------------------eeeecccCCCC------------cccchhhhh
Q 037624 296 S-----------------------------------------------NLTLLAGTYGY------------EKCDVYSFG 316 (408)
Q Consensus 296 ~-----------------------------------------------~~~~~~gt~~y------------~k~DVySfG 316 (408)
. .....+||.+| .++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0 00124688888 689999999
Q ss_pred HHHHHHHhCCCCCcc
Q 037624 317 VVALEILMGRQPGEL 331 (408)
Q Consensus 317 vvl~Elltg~~p~~~ 331 (408)
|+++||+||+.||..
T Consensus 236 vil~elltG~~Pf~~ 250 (377)
T cd05629 236 AIMFECLIGWPPFCS 250 (377)
T ss_pred hhhhhhhcCCCCCCC
Confidence 999999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-24 Score=197.48 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=119.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+.+|++++. +|+|++++.++ +..+...
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE-ENEEVKETTLRELKMLRTLKQENIVELKEA----FRRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhhHHHHHHHHHhCCCccccchhhh----EecCCEE
Confidence 36888899999999999999985 57899999997532 22334567889999986 78888887777 6677788
Q ss_pred hhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ +++.+.... +++|.|++++.++.+||+|||+++......
T Consensus 76 ~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 76 YLVFEYV-EKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred EEEEecC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 9999998 666544321 168888999999999999999998764322
Q ss_pred C-eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 S-NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~-~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. ......||..| .++|||||||+++||++|+.||..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~ 203 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPG 203 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCC
Confidence 1 12334577766 689999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-24 Score=197.54 Aligned_cols=201 Identities=17% Similarity=0.193 Sum_probs=141.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|.. .+++.+|||.+......+.....+|.+|++++. .|+|+++++++ +..+...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~ 77 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS----FIEDNEL 77 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhhe----eEeCCeE
Confidence 4677788999999999999996 578899999887543333344568899999886 78888888777 6667778
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ ++++|.+++. ++|.|++++.++.++|+|||+++..
T Consensus 78 ~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 78 NIVLELA-DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEec-CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 8899988 7777765431 6777888889999999999998876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...........|+..| .++||||||+++|||++|+.|+.....-. ......+.....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~-- 230 (267)
T cd08229 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----YSLCKKIEQCDYPPLPS-- 230 (267)
T ss_pred ccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH----HHHhhhhhcCCCCCCCc--
Confidence 4333222334566555 57999999999999999999985321100 00000111111122211
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..||+.+|++|++
T Consensus 231 ----~~~~~~~~~li~~~l~~~p~~Rpt 254 (267)
T cd08229 231 ----DHYSEELRQLVNMCINPDPEKRPD 254 (267)
T ss_pred ----ccccHHHHHHHHHhcCCCcccCCC
Confidence 122345678888999999999944
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-24 Score=204.57 Aligned_cols=197 Identities=21% Similarity=0.326 Sum_probs=138.0
Q ss_pred hcccceeecccceeEEEEEEe----CCCcEEEEEecccccC-CCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL----TSSKVIALKKLHHWEN-EEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
+|+..+.||+|+||.||+++. .+++.||+|.+..... ......+.+.+|++++. .|++++.+..+ +..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~ 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYA----FQT 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEE----Eec
Confidence 477789999999999999986 3578999999865321 12223456788888886 46677766655 666
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+...++++||+ ++|+|..++. +||.|++++.++.+||+|||+++..
T Consensus 77 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 77 EAKLHLILDYV-SGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred CCEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 77788999999 8888877652 7889999999999999999999865
Q ss_pred CCCCC-eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc--cCCCC
Q 037624 292 YCDSS-NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV--LDPRL 355 (408)
Q Consensus 292 ~~~~~-~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~d~~l 355 (408)
..... ......||..| .++|||||||+++||+||+.||........ .......+ .++.+
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~~~~~~~~~~~~~ 230 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-----QSEVSRRILKCDPPF 230 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-----HHHHHHHHhcCCCCC
Confidence 33222 22345677777 579999999999999999999863221100 00000111 12222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.. .....+.+++..|++.||++|+
T Consensus 231 ~~-------~~~~~~~~li~~~l~~dp~~R~ 254 (332)
T cd05614 231 PS-------FIGPEAQDLLHKLLRKDPKKRL 254 (332)
T ss_pred CC-------CCCHHHHHHHHHHcCCCHHHcC
Confidence 21 1123356778899999999995
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-24 Score=207.26 Aligned_cols=154 Identities=23% Similarity=0.307 Sum_probs=121.6
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|...+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++. .|+|+++++.. +..+...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~----~~~~~~~~ 77 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYS----FQDKDNLY 77 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEE----EEeCCEEE
Confidence 477889999999999999997 458899999997543223334567889999886 78888887777 67778899
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC-
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS- 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~- 295 (408)
+|+||+ ++|+|..++. +||.|++++.++++||+|||+++......
T Consensus 78 lv~E~~-~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 78 FVMDYI-PGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred EEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999 8888877652 78899999999999999999975321000
Q ss_pred ----------------------------------------------CeeeecccCCCC------------cccchhhhhH
Q 037624 296 ----------------------------------------------SNLTLLAGTYGY------------EKCDVYSFGV 317 (408)
Q Consensus 296 ----------------------------------------------~~~~~~~gt~~y------------~k~DVySfGv 317 (408)
......+||..| .++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 001234688888 6899999999
Q ss_pred HHHHHHhCCCCCcc
Q 037624 318 VALEILMGRQPGEL 331 (408)
Q Consensus 318 vl~Elltg~~p~~~ 331 (408)
+++||+||+.||..
T Consensus 237 il~elltG~~Pf~~ 250 (382)
T cd05625 237 ILYEMLVGQPPFLA 250 (382)
T ss_pred HHHHHHhCCCCCCC
Confidence 99999999999964
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-24 Score=196.05 Aligned_cols=194 Identities=20% Similarity=0.211 Sum_probs=132.0
Q ss_pred ecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|+||.||++... +|+.||+|++...........+.+..|++++. +|+|++++... +..+...++++||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~----~~~~~~~~lv~e~~- 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYA----FESKTHLCLVMSLM- 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEE----EecCCeEEEEEecC-
Confidence 799999999999974 58999999986533222223345667888886 67776666655 56677889999999
Q ss_pred cchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCCCeeeec
Q 037624 257 EACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 257 ~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
++++|..++. ++|.|+++++++.+||+|||++....... .....
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~ 154 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQR 154 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeecc
Confidence 8888865441 68889999999999999999998664322 22334
Q ss_pred ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHH
Q 037624 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVL 369 (408)
Q Consensus 302 ~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 369 (408)
.||..| .++|||||||++|||++|+.||.....- ..............+.... ......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~ 225 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-----VAKEELKRRTLEDEVKFEH----QNFTEE 225 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-----hhHHHHHHHhhcccccccc----ccCCHH
Confidence 566666 6899999999999999999998632110 0000111112222221110 012234
Q ss_pred HHHHHHhhccCCCCCcCCC
Q 037624 370 VSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 370 ~~~l~~~C~~~~P~~Rm~~ 388 (408)
+.+++..|++.||++|+++
T Consensus 226 ~~~li~~~L~~~P~~R~~~ 244 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGS 244 (277)
T ss_pred HHHHHHHHhccCHhhCCCC
Confidence 5688889999999999443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-24 Score=205.02 Aligned_cols=155 Identities=25% Similarity=0.364 Sum_probs=122.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|... +|+.||+|+++..........+.+.+|+.++. .|+|++++..+ +......
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~----~~~~~~~ 76 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYA----FQDKDNL 76 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeE----EecCCeE
Confidence 46888899999999999999974 58899999997643323334567888888886 78888887776 6677788
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++|+|..++. ++|.|++++.++.+||+|||+++.....
T Consensus 77 ~lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 77 YLVMEYQ-PGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred EEEECCC-CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999 8888877652 6888999999999999999999876543
Q ss_pred CCe-eeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSN-LTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~-~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... .....||..| .++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 222 1233566665 468999999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-24 Score=199.02 Aligned_cols=154 Identities=19% Similarity=0.230 Sum_probs=116.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.++. +|+|++.+.++ +..+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~~ 77 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDI----IHTKET 77 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEE----EecCCe
Confidence 367888999999999999999985 688999999875322 122346778999886 78887777766 666777
Q ss_pred chhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ + +++.+++ ++||.|+++++++.+||+|||+++....
T Consensus 78 ~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 78 LTLVFEYV-H-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EEEEEECC-C-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 88999998 4 3443332 1788999999999999999999976533
Q ss_pred CCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 294 DSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.........||..| .++||||+||+++||+||+.||...
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22222233455555 5789999999999999999999643
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-24 Score=198.58 Aligned_cols=196 Identities=20% Similarity=0.322 Sum_probs=138.2
Q ss_pred hhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|+..+.||+|+||.||+|.... ...||+|.+... .......+|.+|++++. +|+|+++++++ +.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~----~~ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN--AEPKVQQEFRQEAELMSDLQHPNIVCLLGV----CT 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC--CCHHHHHHHHHHHHHHHhcCCcccceEEEE----Ec
Confidence 467788999999999999998743 257999998643 22334567899999886 78888888777 66
Q ss_pred CCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLSWIG 274 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l 274 (408)
.....++++||+ ++++|.+++ +++|.|+++
T Consensus 79 ~~~~~~~~~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~ 157 (283)
T cd05048 79 KEQPTCMLFEYL-AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV 157 (283)
T ss_pred CCCceEEEEecC-CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE
Confidence 777788899998 777776543 167888889
Q ss_pred ccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCc
Q 037624 275 LRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSS 339 (408)
Q Consensus 275 ~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 339 (408)
++++.+||+|||+++........ .....++..| .++|||||||+++||+| |+.||.....
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~----- 232 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN----- 232 (283)
T ss_pred cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence 99999999999999865332211 1222344444 68999999999999998 9999864211
Q ss_pred cccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 340 SSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 340 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .+.+.+...... .....+...+.+++..||+.+|++|++
T Consensus 233 ----~-~~~~~i~~~~~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~ 272 (283)
T cd05048 233 ----Q-EVIEMIRSRQLL---PCPEDCPARVYALMIECWNEIPARRPR 272 (283)
T ss_pred ----H-HHHHHHHcCCcC---CCcccCCHHHHHHHHHHccCChhhCcC
Confidence 1 112222111111 111234566788999999999999944
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-24 Score=195.54 Aligned_cols=194 Identities=18% Similarity=0.271 Sum_probs=138.3
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||.||+|...+++.||+|.+.... ...+.|.+|+.++. +|+|++++.+. +......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 77 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAV----VTKEEPIY 77 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEE----EcCCCCcE
Confidence 5788889999999999999999888899999986422 23567899999986 78888777766 66777789
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.....
T Consensus 78 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 78 IITEYM-AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEecC-CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 999999 8888876652 6788888999999999999999876432
Q ss_pred CCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... .....++..| .++|||||||+++||+| |+.||..... ......+ ......+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---------~~~~~~~-~~~~~~~~- 225 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---------SDVMSAL-QRGYRMPR- 225 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---------HHHHHHH-HcCCCCCC-
Confidence 211 1112233344 57999999999999999 9999853211 0001111 11111100
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+|++.+|++|++
T Consensus 226 --~~~~~~~~~~li~~~l~~~p~~Rp~ 250 (261)
T cd05072 226 --MENCPDELYDIMKTCWKEKAEERPT 250 (261)
T ss_pred --CCCCCHHHHHHHHHHccCCcccCcC
Confidence 0112345678899999999999944
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.9e-24 Score=196.22 Aligned_cols=155 Identities=19% Similarity=0.226 Sum_probs=112.1
Q ss_pred hcccceeecccceeEEEEEEe-C-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeee-cC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-T-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVC-IK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~-~~ 244 (408)
+|...+.||+|+||.||+|+. . +|+.||+|+++..... ......+.+|++++. .|+|++++++++.... ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 577789999999999999987 3 4678999998753322 223345667777664 5888888777632111 12
Q ss_pred Cccchhhhhhcccchhhhhhh-----------------------------------ccCccccccccCCceEEeeccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
....++++||+ + +++..++ ++||.|+++++++.+||+|||+++
T Consensus 81 ~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 81 ETKLTLVFEHV-D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCcEEEEEccC-C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 34567888887 3 3444333 178889999999999999999998
Q ss_pred ccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 290 HLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 290 ~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... .......||..| .++|||||||+++||+||+.||..
T Consensus 159 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 159 IYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred eccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 76433 222345677777 689999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-24 Score=203.13 Aligned_cols=155 Identities=23% Similarity=0.318 Sum_probs=123.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|... +++.||||++.............+.+|+.++. .|++++++... +.+....
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~----~~~~~~~ 76 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYS----FQDKLNL 76 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEE----EecCCeE
Confidence 47888999999999999999874 58899999997543222334566788988886 77777777776 6777788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|++++.++++||+|||+++......
T Consensus 77 ~lv~E~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 77 YLIMEFL-PGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EEEEcCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999 8999887762 78999999999999999999997643211
Q ss_pred C-----------------------------------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCC
Q 037624 296 S-----------------------------------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 296 ~-----------------------------------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p 328 (408)
. .....+||..| .++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 01235788888 689999999999999999999
Q ss_pred Ccc
Q 037624 329 GEL 331 (408)
Q Consensus 329 ~~~ 331 (408)
|..
T Consensus 236 f~~ 238 (363)
T cd05628 236 FCS 238 (363)
T ss_pred CCC
Confidence 964
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-24 Score=198.44 Aligned_cols=198 Identities=20% Similarity=0.308 Sum_probs=141.9
Q ss_pred HHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
++..+|+..+.||+|+||.||+|...+++.+|+|.+.... ......+.+|+.++. +|+|+++++++ +....
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~ 75 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAV----CSVGE 75 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeee----EecCC
Confidence 3456788889999999999999999889999999987532 223567889999886 78888887777 77778
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||+ ++++|.+++. +++.|+++++++.+||+|||++...
T Consensus 76 ~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 76 PVYIITELM-EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred CeEEEEeec-ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhc
Confidence 889999999 8888877652 6778888999999999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
...........++..| .++|||||||+++||++ |+.|+..... ......+. .....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---------~~~~~~~~-~~~~~~ 224 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---------HEVYDQIT-AGYRMP 224 (261)
T ss_pred CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---------HHHHHHHH-hCCcCC
Confidence 4332111112223333 68999999999999999 8999863221 11111111 111111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ...+...+.+++..|++.+|++|++
T Consensus 225 ~---~~~~~~~~~~~i~~~l~~~p~~Rpt 250 (261)
T cd05148 225 C---PAKCPQEIYKIMLECWAAEPEDRPS 250 (261)
T ss_pred C---CCCCCHHHHHHHHHHcCCCchhCcC
Confidence 0 1123345678899999999999943
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-24 Score=194.87 Aligned_cols=197 Identities=20% Similarity=0.231 Sum_probs=139.0
Q ss_pred HhhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.++|+..+.||+|+||.||+|++.. ...||||.++... .......|.+|+.++. +|+|++++.++ +..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~ 76 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGV----VTK 76 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEE----Eec
Confidence 3578889999999999999999843 3579999986532 2334567999999887 78888888777 667
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.
T Consensus 77 ~~~~~iv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 77 SRPVMIITEYM-ENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred CCceEEEEEcC-CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 77888999999 8888876652 678888999999999999999987
Q ss_pred cCCCCCeee--ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSNLT--LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~~~--~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
......... ...++..| .++||||||++++||+| |+.|+..... ......+.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---------~~~~~~~~~~~~ 226 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---------QDVIKAVEDGYR 226 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---------HHHHHHHHcCCC
Confidence 742221111 11223334 68999999999999998 9999753211 001111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+. ...+...+.+++..||+.+|++|++
T Consensus 227 ~~~----~~~~~~~l~~li~~cl~~~p~~Rp~ 254 (266)
T cd05033 227 LPP----PMDCPSALYQLMLDCWQKDRNERPT 254 (266)
T ss_pred CCC----CCCCCHHHHHHHHHHcCCCcccCcC
Confidence 110 1123445778999999999999943
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-24 Score=201.98 Aligned_cols=155 Identities=25% Similarity=0.417 Sum_probs=121.8
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+++.. +++.||+|.+.............+.+|+.++. .|++++.+..+ +......
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~----~~~~~~~ 76 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYA----FQDENYL 76 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEcCCEE
Confidence 46888899999999999999984 57889999986532222233456778888875 77777777776 6777889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++|+|..++. +||.|++++.++.+||+|||+++.....
T Consensus 77 ~lv~Ey~-~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 77 YLVMDYY-VGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred EEEEeCC-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999 8888887662 6888888999999999999999876543
Q ss_pred CCe-eeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSN-LTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~-~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... .....||.+| .++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 322 2234577776 368999999999999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.7e-24 Score=194.28 Aligned_cols=194 Identities=17% Similarity=0.229 Sum_probs=136.3
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|...++..||+|.+.... ....+|.+|+.++. +|+|++++.++ +......+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 75 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMKLSHEKLVQLYGV----CTKQRPIY 75 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc----ccHHHHHHHHHHHhcCCCCCeeeEEEE----EccCCCcE
Confidence 4677788999999999999998777789999986432 12467899999886 78888877777 66777788
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ +++++.+++. ++|.|+++++++.+||+|||+++......
T Consensus 76 lv~e~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 76 IVTEYM-SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEEEcC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 999998 7777776652 67888888899999999999998654322
Q ss_pred Cee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 296 SNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 296 ~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
... ....++..| .++|||||||++|||+| |+.|+...... .....+.+......
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~--- 222 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---------ETVEKVSQGLRLYR--- 222 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---------HHHHHHhcCCCCCC---
Confidence 111 111223333 68999999999999999 99998632210 01111111111100
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 223 -~~~~~~~~~~li~~cl~~~p~~Rp~ 247 (256)
T cd05113 223 -PHLASEKVYAIMYSCWHEKAEERPT 247 (256)
T ss_pred -CCCCCHHHHHHHHHHcCCCcccCCC
Confidence 0112345678889999999999944
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-24 Score=202.15 Aligned_cols=200 Identities=19% Similarity=0.257 Sum_probs=150.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchh
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
++|...+.+|+|+||.++..+. .+++.+++|++...... ...++....|+.+++ ...|++++.|.+.+..++...++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t-~~~r~~A~~E~~lis-~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT-EPERRSAIQEMDLLS-KLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC-chhhHHHHHHHHHHH-hccCCCeeeeccchhcCCceEEE
Confidence 4677789999999999998887 45778999999875433 334567889999996 24445556666665555555999
Q ss_pred hhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
|++|+ ++|++.+.+. +|+.|+++..+..+||+|||+||.+..+.
T Consensus 82 vm~Y~-eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 82 VMEYC-EGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred EEeec-CCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999 9999988773 67788889989999999999999998777
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....+++||+.| .|+|+||+||+++||++-+++|...+. ...+..+......+ .+
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---------~~Li~ki~~~~~~P----lp 227 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---------SELILKINRGLYSP----LP 227 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---------HHHHHHHhhccCCC----CC
Confidence 677789999999 899999999999999999999974321 11223333322221 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+..++..|++.+|+.|+.
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPs 251 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPS 251 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCC
Confidence 122334557778899999999943
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-24 Score=194.19 Aligned_cols=195 Identities=18% Similarity=0.261 Sum_probs=138.8
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|+..+.||+|++|.||+|...+++.||+|.++... ...++|.+|++++. +|+|++++.++ +......
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 76 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT----MDPKDFLAEAQIMKKLRHPKLIQLYAV----CTLEEPI 76 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc----ccHHHHHHHHHHHHHCCCCCccceeEE----EecCCCe
Confidence 45788889999999999999998778889999987532 22467899999886 78888888877 7777788
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||. ++++|.+++. ++|.|+++++++.+||+|||+++....
T Consensus 77 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 77 YIVTELM-KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeeeecc-cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999998 7888876652 678888888999999999999987642
Q ss_pred CCCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 294 DSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 294 ~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
..... ....++..| .++|||||||+++||+| |+.|+...... .+...++.....+
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----------~~~~~~~~~~~~~- 224 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----------EVLQQVDQGYRMP- 224 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH----------HHHHHHHcCCCCC-
Confidence 21110 011111223 58999999999999999 99998532110 0111111111110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++.+|++.+|++|++
T Consensus 225 --~~~~~~~~~~~li~~~l~~~P~~Rp~ 250 (261)
T cd05068 225 --CPPGCPKELYDIMLDCWKEDPDDRPT 250 (261)
T ss_pred --CCCcCCHHHHHHHHHHhhcCcccCCC
Confidence 01123355778899999999999944
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-24 Score=195.41 Aligned_cols=202 Identities=20% Similarity=0.271 Sum_probs=137.2
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeec-
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCI- 243 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~- 243 (408)
.+++.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++. .|+|++++.+++.....
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 46778888899999999999999984 58899999986432 22456788888775 57888877776221100
Q ss_pred -CCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccc
Q 037624 244 -KDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 244 -~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
.....++++||+ ++++|..++. +++.|+++++++.+||+|||+
T Consensus 79 ~~~~~~~iv~e~~-~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 79 GMDDQLWLVMEFC-GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred CCCcEEEEEEEcC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 124578999999 7777776652 567777788999999999999
Q ss_pred ccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc
Q 037624 288 TMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV 350 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 350 (408)
++.............|+..| .++|||||||++|||++|+.|++....... .......
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~------~~~~~~~ 231 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------LFLIPRN 231 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH------HHHHhcC
Confidence 98654322222334455554 479999999999999999999864321111 0000111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+.. ......+.+++.+||+.+|.+|++
T Consensus 232 ~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rpt 262 (272)
T cd06637 232 PAPRLKS------KKWSKKFQSFIESCLVKNHSQRPT 262 (272)
T ss_pred CCCCCCC------CCcCHHHHHHHHHHcCCChhhCCC
Confidence 1111111 112234678889999999999955
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-24 Score=197.18 Aligned_cols=204 Identities=18% Similarity=0.261 Sum_probs=147.1
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCC-------c----chhhHHHHHHHHhc--ccCCccee
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEE-------P----ASTRSFQNEVDILY--PKYDIETL 234 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~-------~----~~~~~~~~E~~~l~--~~~n~~~l 234 (408)
+.-++|...+.||+|.||.|-+|+. .+++.||||++.+..... . ...+...+||.+|. .|+|+|+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3456888899999999999999997 568999999996532111 1 12347889999998 88888888
Q ss_pred eeEeEeeecCCccchhhhhhcccchhhhhh-------------------------h--------ccCccccccccCCceE
Q 037624 235 LSFMDFVCIKDACFWFMNTWRGEACSVFCT-------------------------M--------IMKPLSWIGLRELEAF 281 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~-------------------------l--------~~k~~~~~l~~~~~~k 281 (408)
+.+++ .......|+|.||+ ..|.+... | ++||.|+++.+++++|
T Consensus 174 iEvLD--DP~s~~~YlVley~-s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLD--DPESDKLYLVLEYC-SKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEeec--CcccCceEEEEEec-cCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 88855 44456788999998 55543211 1 2899999999999999
Q ss_pred EeecccccccCCCC-----CeeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcccccccCCcc
Q 037624 282 VADFGMTMHLYCDS-----SNLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSS 340 (408)
Q Consensus 282 i~DfGla~~~~~~~-----~~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 340 (408)
|+|||.+-...... ......+||+.| .+.||||+||.||-|+-|+.||....
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------- 323 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------- 323 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-------
Confidence 99999998653221 112346788877 67899999999999999999986321
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.-.....|+...+.-+..+ +.-..+.+|++..+++||++||.
T Consensus 324 --~~~l~~KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~ 365 (576)
T KOG0585|consen 324 --ELELFDKIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRIT 365 (576)
T ss_pred --HHHHHHHHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheee
Confidence 1122345555555433222 23344557788899999999954
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-24 Score=209.64 Aligned_cols=193 Identities=16% Similarity=0.160 Sum_probs=139.9
Q ss_pred cccceeecccceeEEEEEEeC-C-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-S-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
|...+.||+|+||.||+|... + ++.||+|.+... +......+.+|+.++. +|+|+++++++ +..++..+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~----~~~~~~~~ 141 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDD----FKSDDKLL 141 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEE----EEECCEEE
Confidence 788899999999999999863 3 567888876432 2233456788999987 78888887777 77778899
Q ss_pred hhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccccC
Q 037624 250 FMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+++||+ ++|+|..++. +||.|++++.++.+||+|||+++...
T Consensus 142 lv~E~~-~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 142 LIMEYG-SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EEEECC-CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 999999 9999865431 78899999999999999999998764
Q ss_pred CCCC--eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 293 CDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 293 ~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
.... .....+||++| .++|||||||+++||+||+.||..... ...+..+......+.
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---------~~~~~~~~~~~~~~~ 291 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---------REIMQQVLYGKYDPF 291 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCC
Confidence 3321 12345688888 679999999999999999999863211 111122222111110
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+......+.+++..|++.+|++|++
T Consensus 292 ----~~~~s~~~~~li~~~L~~dP~~Rps 316 (478)
T PTZ00267 292 ----PCPVSSGMKALLDPLLSKNPALRPT 316 (478)
T ss_pred ----CccCCHHHHHHHHHHhccChhhCcC
Confidence 0112234668888999999999943
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-24 Score=196.70 Aligned_cols=193 Identities=17% Similarity=0.229 Sum_probs=147.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..|+..+.||+|.||.|-+|.- ..|+.||||.+++....+.+..-...+||++|+ .|||+..++.+ +...+..
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV----FENkdKI 128 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV----FENKDKI 128 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh----hcCCceE
Confidence 3466668899999999999986 679999999999877777777778899999995 55555555555 6777788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||||. .+|.|++|+. +|..|+++|.+.++||+||||+-.+..+
T Consensus 129 vivMEYa-S~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~- 206 (668)
T KOG0611|consen 129 VIVMEYA-SGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK- 206 (668)
T ss_pred EEEEEec-CCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc-
Confidence 9999999 9999999983 6788999999999999999999876433
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
...++++|++-| ..+|-||+||+||-|+.|..||+... ....+.++-....+.+..
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D---------hk~lvrQIs~GaYrEP~~-- 275 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD---------HKRLVRQISRGAYREPET-- 275 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch---------HHHHHHHhhcccccCCCC--
Confidence 345667787777 78999999999999999999998532 222233444444433211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCc
Q 037624 363 VVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
+....-|+.+.+..+|++|
T Consensus 276 ----PSdA~gLIRwmLmVNP~RR 294 (668)
T KOG0611|consen 276 ----PSDASGLIRWMLMVNPERR 294 (668)
T ss_pred ----CchHHHHHHHHHhcCcccc
Confidence 1122345556777899988
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-24 Score=195.95 Aligned_cols=198 Identities=18% Similarity=0.195 Sum_probs=135.5
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|...+.||+|+||+||+|.. .+++.||+|.+.............+.+|++++. +|++++.+... +..++..++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~----~~~~~~~~l 77 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYA----YETKDALCL 77 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEE----EecCCEEEE
Confidence 56678899999999999998 468899999986543222233456788999886 77777776666 666777889
Q ss_pred hhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||+ +++++..++. ++|.|+++++++.+||+|||+++......
T Consensus 78 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 78 VLTIM-NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EEEec-cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 99998 7777765441 57778888888999999999997653322
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......|+..| .++|||||||+++||+||+.||........ .......+.+.... ..
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-----~~~~~~~~~~~~~~-----~~ 225 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-----REEVDRRVLETEEV-----YS 225 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHHhhhccccc-----cC
Confidence 12234566666 679999999999999999999864211000 00000111111100 01
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..|++.+|++|++
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05632 226 AKFSEEAKSICKMLLTKDPKQRLG 249 (285)
T ss_pred ccCCHHHHHHHHHHccCCHhHcCC
Confidence 112234567888999999999954
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-24 Score=206.82 Aligned_cols=154 Identities=22% Similarity=0.305 Sum_probs=121.2
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||+|+.. +++.||||.+.............+.+|++++. .|+|++++... +..++..+
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~----~~~~~~~~ 77 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYS----FQDKDNLY 77 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEE----EEcCCEEE
Confidence 6888899999999999999974 58899999986533222233566889999986 78888887776 67778899
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC--
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD-- 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~-- 294 (408)
+++||+ ++|+|.+++. +||.|++++.++++||+|||+|+.+...
T Consensus 78 lv~E~~-~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 78 FVMDYI-PGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred EEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 999999 8888887652 7888999999999999999998532100
Q ss_pred -----------------------------------------CCeeeecccCCCC------------cccchhhhhHHHHH
Q 037624 295 -----------------------------------------SSNLTLLAGTYGY------------EKCDVYSFGVVALE 321 (408)
Q Consensus 295 -----------------------------------------~~~~~~~~gt~~y------------~k~DVySfGvvl~E 321 (408)
........||..| .++|||||||+++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0001234688888 58999999999999
Q ss_pred HHhCCCCCcc
Q 037624 322 ILMGRQPGEL 331 (408)
Q Consensus 322 lltg~~p~~~ 331 (408)
|+||+.||..
T Consensus 237 ll~G~~Pf~~ 246 (376)
T cd05598 237 MLVGQPPFLA 246 (376)
T ss_pred hhhCCCCCCC
Confidence 9999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=194.57 Aligned_cols=152 Identities=19% Similarity=0.246 Sum_probs=114.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|... +++.||+|+++.... ......+.+|++++. +|+|++++.++ .......
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~~~ 78 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDI----IHTERCL 78 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEE----EcCCCeE
Confidence 46888899999999999999974 588999999875321 223456788999986 78887777776 5666778
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ + +++..++. +||.|+++++++.+||+|||+++.....
T Consensus 79 ~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 79 TLVFEYL-D-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred EEEEeCC-C-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 8899988 4 35554431 7888999999999999999999765432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........||..| .++||||+||+++||+||+.||..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~ 206 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPG 206 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2222223344444 689999999999999999999853
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.7e-25 Score=192.55 Aligned_cols=193 Identities=24% Similarity=0.300 Sum_probs=146.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+-|+...+||+|+||.||||.++ .|++||||++... ...++...|+.+|. ..+.+|+.+|. +......
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGS----YFK~sDL 103 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGS----YFKHSDL 103 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhh----hccCCce
Confidence 34677788999999999999984 5999999998642 24788999999996 44555555554 6667778
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
|+||||+ ..|++.+.+. +|.-|+++.-++.+|++|||+|-.+...
T Consensus 104 WIVMEYC-GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 104 WIVMEYC-GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred Eeehhhc-CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh
Confidence 9999999 7788877663 6777888999999999999999887654
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
-....++.||+.| +++||||+|+...||..|++||...+.+.... +-|.-+++.-..
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF-----------MIPT~PPPTF~K 251 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF-----------MIPTKPPPTFKK 251 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE-----------eccCCCCCCCCC
Confidence 4445678899877 89999999999999999999998665443210 011111111123
Q ss_pred HHHHHHHHHHHHHhhccCCCCCc
Q 037624 363 VVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
+++....+-+.+..|+-++|++|
T Consensus 252 PE~WS~~F~DFi~~CLiK~PE~R 274 (502)
T KOG0574|consen 252 PEEWSSEFNDFIRSCLIKKPEER 274 (502)
T ss_pred hHhhhhHHHHHHHHHhcCCHHHH
Confidence 34555667788899999999999
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=192.74 Aligned_cols=203 Identities=16% Similarity=0.222 Sum_probs=140.0
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
|++.+++++.....||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.++. +|+|+++++++ +
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~ 74 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGS----D 74 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeee----e
Confidence 45667788888889999999999999974 57789999886422 234567889999887 88888888877 7
Q ss_pred cCCccchhhhhhcccchhhhhhhc------------------------------------cCcccccccc-CCceEEeec
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLR-ELEAFVADF 285 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~-~~~~ki~Df 285 (408)
..+...++++||+ ++++|..++. ++|.|++++. ++.+||+||
T Consensus 75 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 75 SENGFFKIFMEQV-PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred ccCCEEEEEEecC-CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecc
Confidence 7778888999998 8888876552 5566777764 679999999
Q ss_pred ccccccCCCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL 351 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 351 (408)
|++..............|+..| .++|||||||+++||++|+.|+........ ..... ...-.
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~--~~~~~ 229 (268)
T cd06624 154 GTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKV--GMFKI 229 (268)
T ss_pred hhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhh--hhhcc
Confidence 9987653322212222344444 689999999999999999999864211100 00000 00001
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 352 DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 352 d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+.. .....+.+++.+||+.+|++|++
T Consensus 230 ~~~~~~-------~~~~~~~~li~~~l~~~p~~Rpt 258 (268)
T cd06624 230 HPEIPE-------SLSAEAKNFILRCFEPDPDKRAS 258 (268)
T ss_pred CCCCCc-------ccCHHHHHHHHHHcCCCchhCCC
Confidence 111211 12234667889999999999954
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=199.29 Aligned_cols=194 Identities=19% Similarity=0.235 Sum_probs=145.0
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
-|...+.||.|+||.||-|+. .+.++||||++.....+...-.++...|+..|. +|||.+..-|| +..+...|
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgC----yLre~TaW 102 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGC----YLREHTAW 102 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccce----eeccchHH
Confidence 356668899999999999997 567899999998766666566788999999996 77777776676 78888999
Q ss_pred hhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+||||| -|+-.+.+ ++|.-|+++.+.+.+|++|||-|....+.
T Consensus 103 LVMEYC--lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 103 LVMEYC--LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHHHHH--hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 999998 23333333 17888999999999999999998876543
Q ss_pred CeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 SNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
..++||+.| -|+||||+||...||.-+++|...++.++.. ..+..--.|.+..
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL------YHIAQNesPtLqs--- 247 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNESPTLQS--- 247 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH------HHHHhcCCCCCCC---
Confidence 457899988 6999999999999999999997644322211 1112222234432
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
..+.+. +...+-.|+++-|.+||+.
T Consensus 248 ~eWS~~---F~~Fvd~CLqKipqeRpts 272 (948)
T KOG0577|consen 248 NEWSDY---FRNFVDSCLQKIPQERPTS 272 (948)
T ss_pred chhHHH---HHHHHHHHHhhCcccCCcH
Confidence 334444 4455567999999999764
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=191.35 Aligned_cols=195 Identities=19% Similarity=0.287 Sum_probs=141.4
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++. .|+|++++++. +..+...+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 78 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGS----YLKGTKLW 78 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEECCEEE
Confidence 4666788999999999999974 58899999986432 2234567889999886 78888888887 77788899
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++||+ ++++|.+++. ++|.|++++.++.++|+|||++.........
T Consensus 79 lv~e~~-~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 79 IIMEYL-GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred EEEecC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 999999 8888877652 5777888889999999999999776433222
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....|+..| .++|||||||+++||+||+.|+....... ..........+ .....
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----------~~~~~~~~~~~---~~~~~ 224 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----------VLFLIPKNNPP---TLTGE 224 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----------HhhhhhcCCCC---CCchh
Confidence 2233455555 68999999999999999999986432110 00111111111 11223
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..||+.+|++||+
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~ 246 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPT 246 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcC
Confidence 4566788999999999999954
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.9e-24 Score=195.56 Aligned_cols=196 Identities=17% Similarity=0.280 Sum_probs=135.9
Q ss_pred hhcccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|+..+.||+|+||.||+|.. .++..||+|.+.... .......|.+|++++. +|+|+++++++ +..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGV----VTQ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEE----Eec
Confidence 4677789999999999999985 346789999997422 2234467889999887 78888887777 666
Q ss_pred Cccchhhhhhcccchhhhhhh--------------------------------------------------ccCcccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTM--------------------------------------------------IMKPLSWIG 274 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l--------------------------------------------------~~k~~~~~l 274 (408)
....++++||+ ++++|.+++ +++|.|+++
T Consensus 79 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili 157 (283)
T cd05090 79 EQPVCMLFEYL-NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI 157 (283)
T ss_pred CCceEEEEEcC-CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE
Confidence 77788999998 777775543 167888899
Q ss_pred ccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCc
Q 037624 275 LRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSS 339 (408)
Q Consensus 275 ~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 339 (408)
++++.+||+|||+++........ .....++..| .++|||||||+++||+| |..||.....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~----- 232 (283)
T cd05090 158 GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN----- 232 (283)
T ss_pred cCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence 99999999999999865332211 1112233333 68999999999999999 9889753211
Q ss_pred cccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 340 SSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 340 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+.++.....+. .......+.+++..||+.+|++|++
T Consensus 233 -----~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~ 272 (283)
T cd05090 233 -----QEVIEMVRKRQLLPC---SEDCPPRMYSLMTECWQEGPSRRPR 272 (283)
T ss_pred -----HHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcccCcccCcC
Confidence 111222221111110 1122345677889999999999943
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-24 Score=195.96 Aligned_cols=196 Identities=20% Similarity=0.315 Sum_probs=137.7
Q ss_pred hhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||.||+|...+ ++.||||.++... .....+.|.+|++++. +|+|+++++++ +.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~ 78 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGV----CT 78 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeE----Ee
Confidence 467778999999999999998743 4689999987532 2224578999999887 88888888887 77
Q ss_pred CCccchhhhhhcccchhhhhhh-----------------------------------------------ccCcccccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM-----------------------------------------------IMKPLSWIGLR 276 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l-----------------------------------------------~~k~~~~~l~~ 276 (408)
.....++++||+ ++++|.+++ +++|.|++++.
T Consensus 79 ~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 157 (280)
T cd05049 79 EGDPPIMVFEYM-EHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY 157 (280)
T ss_pred cCCCeEEEEecC-CCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence 778889999999 877776543 15788888999
Q ss_pred CCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccc
Q 037624 277 ELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSS 341 (408)
Q Consensus 277 ~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~ 341 (408)
++.+||+|||+++........ .....++..| .++|||||||+++||+| |+.||.....
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~------- 230 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN------- 230 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-------
Confidence 999999999999765322111 1112223333 68999999999999999 9999753211
Q ss_pred cccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 342 DQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 342 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+........ .......+.+++..||+.+|++|++
T Consensus 231 --~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~ 270 (280)
T cd05049 231 --EEVIECITQGRLLQR----PRTCPSEVYDIMLGCWKRDPQQRIN 270 (280)
T ss_pred --HHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCCcccCCC
Confidence 111111111111111 1123345778899999999999954
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-24 Score=205.77 Aligned_cols=155 Identities=21% Similarity=0.310 Sum_probs=122.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+++.. +++.||+|.+.............+.+|++++. +|++++++... +......
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~----~~~~~~~ 76 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYS----FQDKRNL 76 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEE----EEcCCEE
Confidence 46888899999999999999985 58899999997543333334567888998886 67777777666 6677888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|++++.++++||+|||+++.+....
T Consensus 77 ~lv~E~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 77 YLIMEFL-PGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EEEEeCC-CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999 8998887762 78899999999999999999987542210
Q ss_pred C-----------------------------------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCC
Q 037624 296 S-----------------------------------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 296 ~-----------------------------------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p 328 (408)
. .....+||..| .++|||||||+++||+||+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 01134688888 689999999999999999999
Q ss_pred Ccc
Q 037624 329 GEL 331 (408)
Q Consensus 329 ~~~ 331 (408)
|..
T Consensus 236 f~~ 238 (360)
T cd05627 236 FCS 238 (360)
T ss_pred CCC
Confidence 864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-24 Score=195.96 Aligned_cols=201 Identities=22% Similarity=0.280 Sum_probs=151.2
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
.+..++| +|+...+||+|+||.|..|.-+. .+.+|||++++.-.......+--+.|-++|+ +-|-++.+-.+
T Consensus 343 ~d~i~~t-DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc--- 418 (683)
T KOG0696|consen 343 RDRIKAT-DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC--- 418 (683)
T ss_pred ccceeec-ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH---
Confidence 3444454 68889999999999999998754 5679999998643322233445567777776 55556666666
Q ss_pred eecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
...-+..+.||||+ .+|+|.-++. +|..|++++.++++||+|||+
T Consensus 419 -FQTmDRLyFVMEyv-nGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 419 -FQTMDRLYFVMEYV-NGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred -hhhhhheeeEEEEe-cCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccc
Confidence 67778889999999 8999877662 677899999999999999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
++.---+..+..+.+||+.| ..+|.|||||+||||+.|++||+. ...+.....+.+...
T Consensus 497 cKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG---------eDE~elF~aI~ehnv 567 (683)
T KOG0696|consen 497 CKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG---------EDEDELFQAIMEHNV 567 (683)
T ss_pred ccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC---------CCHHHHHHHHHHccC
Confidence 99866566666789999998 678999999999999999999984 334444556666655
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
.-+ . .-..+...+...-+.+.|.+|
T Consensus 568 syP--K---slSkEAv~ickg~ltK~P~kR 592 (683)
T KOG0696|consen 568 SYP--K---SLSKEAVAICKGLLTKHPGKR 592 (683)
T ss_pred cCc--c---cccHHHHHHHHHHhhcCCccc
Confidence 432 1 122334556667789999999
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-24 Score=194.99 Aligned_cols=198 Identities=20% Similarity=0.224 Sum_probs=136.8
Q ss_pred HHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
++++|+..+.||+|+||.||+|... .+..||||++... .......+|.+|+.++. +|+|++++.++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~---- 77 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRLLGV---- 77 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCeeeEEEE----
Confidence 5678999999999999999999753 2467999998642 22234567889999886 77887777776
Q ss_pred ecCCccchhhhhhcccchhhhhhhc-------------------------------------------cCccccccccCC
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI-------------------------------------------MKPLSWIGLREL 278 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------~k~~~~~l~~~~ 278 (408)
+..+...++++||+ ++++|.+++. ++|.|+++++++
T Consensus 78 ~~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 78 VSQGQPTLVIMELM-TRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF 156 (277)
T ss_pred EcCCCCeEEEEecC-CCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC
Confidence 67777888999998 7777655431 678888899999
Q ss_pred ceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccc
Q 037624 279 EAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 343 (408)
.+||+|||+++......... ....++..| .++|||||||+++||+| |+.|+.... .
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~---------~ 227 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS---------N 227 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC---------H
Confidence 99999999997653322111 111233334 68999999999999999 688875321 1
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+...... ...+...+.+++.+|++.+|++|++
T Consensus 228 ~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps 267 (277)
T cd05062 228 EQVLRFVMEGGLLDK----PDNCPDMLFELMRMCWQYNPKMRPS 267 (277)
T ss_pred HHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCChhhCcC
Confidence 111111222221110 1123345778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=199.22 Aligned_cols=155 Identities=29% Similarity=0.444 Sum_probs=120.6
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+++... ++.+|+|.+.............|..|+.++. +|++++++..+ +......
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~ 76 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYA----FQDENNL 76 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEE----EecCCEE
Confidence 468888999999999999999854 7789999986432222223455788888875 67777777666 6677888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++|+|.+++. +||.|++++.++++||+|||+++.....
T Consensus 77 ~lv~ey~-~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 77 YLVMDYY-VGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred EEEEecc-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999 8888887762 6888888999999999999999765433
Q ss_pred CCe-eeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSN-LTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~-~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... .....||..| .++|||||||++|||++|+.||..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 222 2234677776 479999999999999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-24 Score=195.27 Aligned_cols=198 Identities=20% Similarity=0.292 Sum_probs=140.8
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|++++. +|+|+++++++ +..+...+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 78 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGS----YLKGTKLW 78 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcc----cccCCceE
Confidence 4566678999999999999874 57889999986432 2234567889999987 78888888887 77778899
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++||+ +++++..++. ++|.|+++++++.+|++|||+++........
T Consensus 79 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 79 IIMEYL-GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred EEEEcc-CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence 999999 8888876652 6788888889999999999999876433222
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....|+..| .++|||||||+++||+||+.|+......... ..+.....+.+. ..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~~~~~~~~~~~~-------~~ 224 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL------FLIPKNSPPTLE-------GQ 224 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH------hhhhcCCCCCCC-------cc
Confidence 2233455555 5899999999999999999998632211100 000011111111 12
Q ss_pred HHHHHHHHHHhhccCCCCCc--CCCcc
Q 037624 366 DIVLVSTILFACLRSNPKTP--MQKPF 390 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~R--m~~~~ 390 (408)
....+.+++..||+.+|++| |.+++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 33457788899999999999 44443
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-23 Score=200.02 Aligned_cols=155 Identities=21% Similarity=0.281 Sum_probs=112.4
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-cCCccch
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC-IKDACFW 249 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~-~~~~~~~ 249 (408)
|+..+.||+|+||.||+|+.. +|+.||||++.... ........+.+|++++. +|+|++++.+++.... ......+
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 677889999999999999974 68899999987422 12223457889999986 6777777766621111 1112468
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+++||+ + +++..++. +||.|++++.++.+||+|||+++.......
T Consensus 81 lv~e~~-~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 81 VVFELM-E-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEecC-C-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 899998 4 45554431 788999999999999999999986532211
Q ss_pred e---eeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 N---LTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ~---~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. .....||..| .++|||||||+++||+||+.||..
T Consensus 159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 1 1234566666 579999999999999999999854
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-23 Score=193.03 Aligned_cols=195 Identities=17% Similarity=0.271 Sum_probs=130.8
Q ss_pred cccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc-
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA- 246 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~- 246 (408)
|...+.||+|+||.||+|.... +..||+|+++... ........+.+|++.+. .|+|+++++++ +....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~ 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGV----CFEASS 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEee----eccCCc
Confidence 4556889999999999998742 3679999987532 22234567899999886 78887777766 43332
Q ss_pred -----cchhhhhhcccchhhhhhh---------------------------------------ccCccccccccCCceEE
Q 037624 247 -----CFWFMNTWRGEACSVFCTM---------------------------------------IMKPLSWIGLRELEAFV 282 (408)
Q Consensus 247 -----~~~lv~e~~~~~g~l~~~l---------------------------------------~~k~~~~~l~~~~~~ki 282 (408)
..++++||+ +++++..++ ++||.|+++++++.+||
T Consensus 76 ~~~~~~~~~v~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl 154 (273)
T cd05035 76 LQKIPKPMVILPFM-KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCV 154 (273)
T ss_pred cccCcccEEEEecc-CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEE
Confidence 367888888 777775443 16888999999999999
Q ss_pred eecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchh
Q 037624 283 ADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIML 347 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 347 (408)
+|||+++......... ....++..| .++|||||||+++||++ |..|+..... ....
T Consensus 155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---------~~~~ 225 (273)
T cd05035 155 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---------HEIY 225 (273)
T ss_pred CCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---------HHHH
Confidence 9999998754322111 111122222 78999999999999999 8888754221 1111
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+..... ........+.+++..||+.||++|++
T Consensus 226 ~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~ 261 (273)
T cd05035 226 DYLRHGNRLK----QPEDCLDELYDLMYSCWRADPKDRPT 261 (273)
T ss_pred HHHHcCCCCC----CCcCCCHHHHHHHHHHcCCChhhCcC
Confidence 1222211111 11123456788889999999999944
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-23 Score=191.39 Aligned_cols=198 Identities=21% Similarity=0.264 Sum_probs=138.1
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.|.+|++++. .|+|+++++++ +......+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~ 75 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGA----FFVENRIS 75 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEE----EEECCEEE
Confidence 567778999999999999987 568899999986432 2234567899999886 78888887777 66667778
Q ss_pred hhhhhcccchhhhhhh-----------------------------ccCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 250 FMNTWRGEACSVFCTM-----------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l-----------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
+++||+ +++++..+. +++|.|++++.++.+||+|||++...... ....
T Consensus 76 lv~e~~-~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~ 152 (279)
T cd06619 76 ICTEFM-DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKT 152 (279)
T ss_pred EEEecC-CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccC
Confidence 999999 887775332 17888999999999999999999865322 1223
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC---CCCCCccchhHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD---PRLSPPVDRMVVR 365 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~ 365 (408)
..||..| .++|||||||++|||+||+.||......... .........+.+ +.+... .
T Consensus 153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~ 224 (279)
T cd06619 153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS--LMPLQLLQCIVDEDPPVLPVG------Q 224 (279)
T ss_pred CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc--cchHHHHHHHhccCCCCCCCC------c
Confidence 4566655 6899999999999999999998643211110 000010111111 111110 1
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..|++.+|++|++
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~ 246 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPA 246 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCC
Confidence 1234678888999999999954
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-23 Score=192.25 Aligned_cols=194 Identities=21% Similarity=0.276 Sum_probs=137.8
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.+|...+.||+|+||.||+|... .++.||+|.+... .....++.+|++++. +|+|++++.++ +..+...
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 77 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREPPF 77 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEE----EcCCCCc
Confidence 45778899999999999999984 4888999998642 223567899999886 88888888887 7778888
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++....
T Consensus 78 ~lv~e~~-~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 78 YIITEFM-TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EEEEEeC-CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 8999999 8888876652 678888898999999999999987643
Q ss_pred CCCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 294 DSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 294 ~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
..... ....++..| .++|||||||+++||+| |..|+...... .....+......+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----------~~~~~~~~~~~~~~ 226 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----------QVYELLEKGYRMER 226 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----------HHHHHHHCCCCCCC
Confidence 22111 111223334 58999999999999998 89997532110 01111111111110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+||+.+|++|++
T Consensus 227 ---~~~~~~~~~~li~~cl~~~p~~Rp~ 251 (263)
T cd05052 227 ---PEGCPPKVYELMRACWQWNPSDRPS 251 (263)
T ss_pred ---CCCCCHHHHHHHHHHccCCcccCCC
Confidence 1122345778889999999999933
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-23 Score=193.69 Aligned_cols=197 Identities=18% Similarity=0.247 Sum_probs=139.7
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.+|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++. +|+|+++++++ +..+...
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~ 91 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDS----YLVGDEL 91 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEE----EecCCEE
Confidence 5688889999999999999997 568899999986432 223466888988886 78888887777 6677788
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++++||+ +++++..++. ++|.|++++.++.+||+|||++........
T Consensus 92 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 92 WVVMEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred EEeeccc-CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999 8888876642 678888899999999999999987644332
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
......|+..| .++|||||||+++||+||+.||........... ....-.+.+.. ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~------~~~~~~~~~~~-----~~ 239 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNGTPELQN-----PE 239 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee------eccCCCCCCCC-----cc
Confidence 22334555555 679999999999999999999864321111000 00000111111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|++|++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps 262 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGS 262 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcC
Confidence 12233567888999999999933
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-23 Score=192.20 Aligned_cols=193 Identities=18% Similarity=0.258 Sum_probs=134.3
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
+|...+.||+|+||.||+|...++..+|+|.+.... .....|.+|++++. +|+|++++.++ +......++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~l 76 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA----MSEDDFIEEAKVMMKLSHPNLVQLYGV----CTKQRPIFI 76 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC----CCHHHHHHHHHHHHhCCCCCEEEEEEE----EcCCCceEE
Confidence 577788999999999999998777789999986422 12457888999886 77777777666 667778889
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.......
T Consensus 77 v~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 77 VTEYM-ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred EEecC-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 99999 8888776652 577788888999999999999986542211
Q ss_pred ee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 297 NL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 297 ~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.. ....++..| .++|||||||++|||+| |+.|++....... ...+.........
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~------ 223 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV------VESVSAGYRLYRP------ 223 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH------HHHHHcCCcCCCC------
Confidence 11 111122233 58999999999999999 8888864221100 0001111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..||+.+|++|++
T Consensus 224 -~~~~~~~~~li~~cl~~~p~~Rpt 247 (256)
T cd05059 224 -KLAPTEVYTIMYSCWHEKPEDRPA 247 (256)
T ss_pred -CCCCHHHHHHHHHHhcCChhhCcC
Confidence 123446778999999999999943
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=194.46 Aligned_cols=195 Identities=17% Similarity=0.248 Sum_probs=133.1
Q ss_pred hcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+|...+.||+|+||.||+|+..+ ++.||+|+++... .....+.|.+|+.++. +|+|+++++++ +..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~----~~~ 79 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGV----VTK 79 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEE----EcC
Confidence 46667889999999999998632 4689999997432 2234567889998876 78888888887 666
Q ss_pred Cccchhhhhhcccchhhhhhh-------------------------------------------------ccCccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLSWIGL 275 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l~ 275 (408)
....+++++|+ +++++..++ ++||.|+++.
T Consensus 80 ~~~~~~~~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 80 EQPLSMIFSYC-SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCceEEEEEcC-CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 66667777776 555544332 1678888899
Q ss_pred cCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS 340 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 340 (408)
+++.+||+|||+++........ .....+++.| .++|||||||+++||+| |..|+.....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------ 232 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------ 232 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 9999999999998865432211 1122334444 68999999999999998 8888753211
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+..... ....+...+.+++..||+.+|++|++
T Consensus 233 ---~~~~~~i~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~RP~ 272 (283)
T cd05091 233 ---QDVIEMIRNRQVLP----CPDDCPAWVYTLMLECWNEFPSRRPR 272 (283)
T ss_pred ---HHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHhCCCcccCCC
Confidence 11122222222211 11133445778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-23 Score=203.39 Aligned_cols=205 Identities=18% Similarity=0.258 Sum_probs=140.4
Q ss_pred HHHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
...++|...+.||+|+||.||+|++. .++.||||+++... .....+.+.+|++++. +|+|++++++.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~-- 109 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA-- 109 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE--
Confidence 34456777889999999999999863 24579999997532 2223457889999987 48999888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhh------------------------------------------------------
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM------------------------------------------------------ 265 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------------ 265 (408)
+......++++||+ ++|+|.+++
T Consensus 110 --~~~~~~~~iv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 110 --CTKGGPIYIITEYC-RYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred --EccCCCcEEEEecc-CCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 77778889999999 888775443
Q ss_pred -----------------------------------------------------------------------------ccC
Q 037624 266 -----------------------------------------------------------------------------IMK 268 (408)
Q Consensus 266 -----------------------------------------------------------------------------~~k 268 (408)
++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlk 266 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLA 266 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCC
Confidence 156
Q ss_pred ccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccc
Q 037624 269 PLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLS 333 (408)
Q Consensus 269 ~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~ 333 (408)
+.|+++++++.+||+|||+++........ .....|+..| .++|||||||+++||++ |+.|+....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 77777888899999999999865322211 1122344444 68999999999999998 888975321
Q ss_pred cccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 334 SLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
. .....+.+....+.+. +......+.+++..||+.+|++| |.+.+..
T Consensus 347 ~---------~~~~~~~~~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 347 M---------NEQFYNAIKRGYRMAK---PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred c---------hHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1 1111122222211110 01123457788889999999999 5554443
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-23 Score=195.66 Aligned_cols=207 Identities=19% Similarity=0.253 Sum_probs=140.9
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeE
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSF 237 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~ 237 (408)
++..++..++++|...+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++. .|+|++++.++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 45567777899999999999999999999998 468899999986422 12355667777765 67888877776
Q ss_pred eEeee-cCCccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCc
Q 037624 238 MDFVC-IKDACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELE 279 (408)
Q Consensus 238 ~~~~~-~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~ 279 (408)
+.... ......++++||+ ++++|.+++. ++|.|+++++++.
T Consensus 88 ~~~~~~~~~~~~~lv~ey~-~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 88 FYKADKLVGGQLWLVLELC-NGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred EEeccccCCCeeEEEEEEC-CCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC
Confidence 22110 1124578999999 8888765431 6777888889999
Q ss_pred eEEeecccccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccc
Q 037624 280 AFVADFGMTMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD 342 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~ 342 (408)
+||+|||+++.............|+..| .++|||||||+++||+||+.|+.......
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~------ 240 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK------ 240 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH------
Confidence 9999999988654322111122334333 57999999999999999999986432111
Q ss_pred ccchhhhcc---CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 QNIMLLDVL---DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 ~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.++. .+.+.. ..+....+.+++..|++.+|++|++
T Consensus 241 ---~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps 280 (291)
T cd06639 241 ---TLFKIPRNPPPTLLH-----PEKWCRSFNHFISQCLIKDFEARPS 280 (291)
T ss_pred ---HHHHHhcCCCCCCCc-----ccccCHHHHHHHHHHhhcChhhCcC
Confidence 111111 111111 1122335778889999999999954
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-23 Score=191.72 Aligned_cols=195 Identities=18% Similarity=0.270 Sum_probs=139.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.++. +|+|++++++. +..+...
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~----~~~~~~~ 92 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDS----YLVGDEL 92 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEE----EEeCCEE
Confidence 4677788999999999999986 4688999999875322 23467888998886 78888877776 6667788
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++++||+ ++++|..++. ++|.|++++.++.+||+|||+++.......
T Consensus 93 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 93 WVVMEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred EEeeccc-CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 9999999 8888876652 678888899999999999999886543322
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC--CCCCCccchh
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD--PRLSPPVDRM 362 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~ 362 (408)
......|+..| .++|||||||+++||+||+.||......... .....+ +.+..
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--------~~~~~~~~~~~~~----- 238 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--------YLIATNGTPELQN----- 238 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--------HHHhcCCCCCCCC-----
Confidence 22233555555 6899999999999999999998643211110 000111 11111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+||+.+|++|++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt 263 (296)
T cd06654 239 PEKLSAIFRDFLNRCLDMDVEKRGS 263 (296)
T ss_pred ccccCHHHHHHHHHHCcCCcccCcC
Confidence 1112234667889999999999944
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=196.02 Aligned_cols=151 Identities=23% Similarity=0.273 Sum_probs=120.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|... ++..+|+|.+.... .......+.+|++++. +|+|+++++++ +..++..
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 78 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGA----FYSDGEI 78 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEE----EEECCEE
Confidence 67888999999999999999985 58889999886532 2234567899999986 78888888877 7777889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. +||.|+++++++.+||+|||+++.....
T Consensus 79 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 79 SICMEHM-DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999 8888877652 6778888889999999999999765322
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. .....||..| .++|||||||++|||++|+.||..
T Consensus 158 ~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 M--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred c--cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1 1234566666 679999999999999999999863
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-23 Score=194.92 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=143.6
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeee
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLS 236 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~ 236 (408)
.+.++.+..++++|+..+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++. +|+|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 355667788899999999999999999999988 457899999876422 12356778887765 5888888887
Q ss_pred EeEee-ecCCccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCC
Q 037624 237 FMDFV-CIKDACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLREL 278 (408)
Q Consensus 237 ~~~~~-~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~ 278 (408)
++... ...+...++++||+ ++++|...+. ++|.|+++++++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELC-NGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eeeecccCCCCeEEEEEeec-CCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC
Confidence 62110 12345678999999 8887765421 577788888899
Q ss_pred ceEEeecccccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccc
Q 037624 279 EAFVADFGMTMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSS 341 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~ 341 (408)
.+||+|||+++.............|+..| .++|||||||++|||+||+.|+...........
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~- 240 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK- 240 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-
Confidence 99999999998764332222334566555 479999999999999999999864322111000
Q ss_pred cccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 342 DQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 342 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+..+ ......+.+++..||+.+|++|++
T Consensus 241 -----~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps 276 (286)
T cd06638 241 -----IPRNPPPTLHQP-----ELWSNEFNDFIRKCLTKDYEKRPT 276 (286)
T ss_pred -----ccccCCCcccCC-----CCcCHHHHHHHHHHccCCcccCCC
Confidence 000011111110 011234668889999999999944
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-23 Score=190.69 Aligned_cols=190 Identities=18% Similarity=0.235 Sum_probs=131.9
Q ss_pred eecccceeEEEEEEe---CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 179 CFGTGGYGSVYIAQL---TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~---~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.||+|+||.||+|.+ .++..+|+|+++... .+....++|.+|+.++. .|+|+++++++ +. ....++++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~-~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGI----CE-AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEE----Ec-CCCcEEEEe
Confidence 589999999999975 357789999987532 23345678999999887 88888888776 54 345678899
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCee--
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL-- 298 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~-- 298 (408)
|+ ++++|..++. ++|.|+++++++.+||+|||+++.........
T Consensus 76 ~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 76 LA-ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 98 8888876652 68889999999999999999998764433221
Q ss_pred -eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 299 -TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 299 -~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
....++..| .++|||||||+++||+| |+.||...... .+.+.++.....+. +.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----------~~~~~i~~~~~~~~---~~ 221 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN----------EVTQMIESGERMEC---PQ 221 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----------HHHHHHHCCCCCCC---CC
Confidence 111223334 48999999999999998 99998632110 11122222111110 01
Q ss_pred HHHHHHHHHHHhhccCCCCCcCCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..||+.+|++|++.
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~ 245 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGF 245 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCH
Confidence 223456688899999999999443
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-23 Score=191.07 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=138.7
Q ss_pred HhhcccceeecccceeEEEEEEeCC-C---cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-S---KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g---~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+++|+..+.||+|+||.||+|+... + ..+|+|.+.... .....+.|.+|++++. +|+|++++.++ +..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~ 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGV----VTK 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEE----Ecc
Confidence 4578888999999999999999842 3 379999986532 2234567899999886 77877777777 677
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++++||+ ++++|..++. ++|.|+++++++.+|++|||+++.
T Consensus 78 ~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 78 FKPAMIITEYM-ENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred CCCcEEEEEcC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCcccee
Confidence 77889999999 8888876652 678888899999999999999986
Q ss_pred cCCCCCee-ee--cccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC
Q 037624 291 LYCDSSNL-TL--LAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 291 ~~~~~~~~-~~--~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
........ +. ...+..| .++|||||||++|||+| |+.||..... ......+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---------~~~~~~i~~~- 226 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---------HEVMKAINDG- 226 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---------HHHHHHHhcC-
Confidence 54321111 11 1111223 68999999999999998 9999853211 1111112111
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcc
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPF 390 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~ 390 (408)
...+ ...+....+.+++..||+.+|++| |.+++
T Consensus 227 ~~~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~ 261 (268)
T cd05063 227 FRLP---APMDCPSAVYQLMLQCWQQDRARRPRFVDIV 261 (268)
T ss_pred CCCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 1111 111334567899999999999999 44443
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-23 Score=196.96 Aligned_cols=155 Identities=26% Similarity=0.444 Sum_probs=122.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+++.. +++.||+|.+...........+.|.+|+.++. .|++++++..+ +..+...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~ 76 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYA----FQDENNL 76 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEE----EecCCeE
Confidence 46888899999999999999974 58899999997533223334566888888876 78888887777 7777889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++|+|..++. +||.|++++.++++||+|||+++.....
T Consensus 77 ~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 77 YLVMDYY-VGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred EEEEecC-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999 8888877662 6788888999999999999999765433
Q ss_pred CCe-eeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSN-LTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~-~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... .....||..| .++|||||||++|||++|+.||..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 221 1224577666 368999999999999999999864
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=191.14 Aligned_cols=195 Identities=16% Similarity=0.215 Sum_probs=131.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||+||+|.+. +++ .||+|.+... ......+++..|+.++. .|+|+++++++ +..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~----~~~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGI----CPG 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEE----ECC
Confidence 46777889999999999999973 454 4778887532 12233466778887775 68887777776 543
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++++||+ ++|+|.+++. ++|.|+++++++.+||+|||+++.
T Consensus 81 -~~~~~i~e~~-~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 81 -ASLQLVTQLS-PLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred -CccEEEEEeC-CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 3456778888 8888887762 678888899999999999999987
Q ss_pred cCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .+...|+..| .++|||||||++||++| |+.|+..... ....+++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~----------~~~~~~~~~~~ 228 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP----------HEVPDLLEKGE 228 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHHHCCC
Confidence 5432211 1223444444 67999999999999998 9999864211 01112222111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. ...+...+.+++..||+.+|++|++
T Consensus 229 ~~~~---~~~~~~~~~~li~~c~~~~p~~Rps 257 (279)
T cd05111 229 RLAQ---PQICTIDVYMVMVKCWMIDENVRPT 257 (279)
T ss_pred cCCC---CCCCCHHHHHHHHHHcCCCcccCcC
Confidence 1100 0112334567888999999999944
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-23 Score=189.29 Aligned_cols=190 Identities=15% Similarity=0.190 Sum_probs=132.8
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhc
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWR 255 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~ 255 (408)
++||+|+||.||+|...+++.||+|.+.... .......|.+|++++. +|+|+++++++ +......++++||+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGV----CTQRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEE----EecCCccEEEEECC
Confidence 3699999999999999889999999986432 2223456889999886 78888888887 77777889999999
Q ss_pred ccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCee-ee
Q 037624 256 GEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL-TL 300 (408)
Q Consensus 256 ~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~-~~ 300 (408)
+++++..++. ++|.|+++++++.+|++|||+++......... ..
T Consensus 75 -~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 75 -PGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred -CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 8888776652 67888888899999999999997543221111 11
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
..++..| .++|||||||+++|++| |+.||...... . ....+....... ......
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---------~-~~~~~~~~~~~~---~~~~~~ 220 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---------Q-AREQVEKGYRMS---CPQKCP 220 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---------H-HHHHHHcCCCCC---CCCCCC
Confidence 1222333 58999999999999999 99998532110 0 001111111110 011233
Q ss_pred HHHHHHHHhhccCCCCCcCC
Q 037624 368 VLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+++..|++.+|++|++
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~ 240 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPK 240 (250)
T ss_pred HHHHHHHHHHcccCcccCCC
Confidence 56778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-23 Score=192.78 Aligned_cols=195 Identities=19% Similarity=0.318 Sum_probs=136.7
Q ss_pred hhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||.||++.. .++..+|+|.+... .....+.|.+|++++. +|+|++++.++ +.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~ 77 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGV----CV 77 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEE----Ee
Confidence 4688889999999999999985 23456899998642 2234567999999886 78888888877 77
Q ss_pred CCccchhhhhhcccchhhhhhhc----------------------------------------------cCccccccccC
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI----------------------------------------------MKPLSWIGLRE 277 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------------~k~~~~~l~~~ 277 (408)
.....++++||+ ++++|.+++. ++|.|++++++
T Consensus 78 ~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 78 EGDPLIMVFEYM-KHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN 156 (288)
T ss_pred cCCccEEEEEcC-CCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 778889999999 7777765431 68888889999
Q ss_pred CceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcccc
Q 037624 278 LEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSD 342 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~ 342 (408)
+.+||+|||+++........ .....++..| .++|||||||+++||+| |+.|+.....
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-------- 228 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------- 228 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------
Confidence 99999999999865332211 1112234444 68999999999999999 8998753211
Q ss_pred ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+........ .......+.+++..||+.+|.+|++
T Consensus 229 -~~~~~~i~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt 268 (288)
T cd05093 229 -NEVIECITQGRVLQR----PRTCPKEVYDLMLGCWQREPHMRLN 268 (288)
T ss_pred -HHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHccCChhhCCC
Confidence 111111111111110 0112335788999999999999954
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-23 Score=192.53 Aligned_cols=194 Identities=20% Similarity=0.242 Sum_probs=142.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||++... +++.||+|.+...........+.+.+|++++. .|+|+++++++ +..+...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 76 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGS----FQDDSNL 76 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeE----EEcCCeE
Confidence 36788899999999999999984 58899999987543333334567889999886 78888888887 6777788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.....
T Consensus 77 ~~v~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 77 YLVMEYV-PGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred EEEEecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 9999999 8888877762 6777888889999999999999876433
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.....|+..| .++||||||++++||+||+.|+..... ......+......-+ .
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~--~-- 219 (290)
T cd05580 155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---------IQIYEKILEGKVRFP--S-- 219 (290)
T ss_pred --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHhcCCccCC--c--
Confidence 1223455555 579999999999999999999864321 111122222222111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|.+|++
T Consensus 220 -~~~~~l~~li~~~l~~~p~~R~~ 242 (290)
T cd05580 220 -FFSPDAKDLIRNLLQVDLTKRLG 242 (290)
T ss_pred -cCCHHHHHHHHHHccCCHHHccC
Confidence 11234567888999999999954
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=192.32 Aligned_cols=198 Identities=18% Similarity=0.202 Sum_probs=137.1
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|+||.||++... +++.||||.+...........+.+.+|+.++. +|++++.+.+. +..+...++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~----~~~~~~~~l 77 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYA----YETKDALCL 77 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEE----EecCCEEEE
Confidence 666788999999999999984 58899999987543333333456788999886 77777777666 666778899
Q ss_pred hhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||+ ++++|..++. ++|.|+++++++.++|+|||++.......
T Consensus 78 v~e~~-~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 78 VLTLM-NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EEEec-CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999 8888866541 67788888899999999999997654322
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......||..| .++|||||||+++||++|+.||....... .........+. ... ...
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~------~~~~~~~~~~~-~~~---~~~ 225 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI------KREEVERLVKE-VQE---EYS 225 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc------hHHHHHhhhhh-hhh---hcC
Confidence 22234577766 67999999999999999999986421100 00011111110 000 000
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..|++.||++|.+
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~R~s 249 (285)
T cd05630 226 EKFSPDARSLCKMLLCKDPKERLG 249 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHccC
Confidence 111234567888999999999954
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=188.24 Aligned_cols=195 Identities=26% Similarity=0.324 Sum_probs=139.2
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|...+ ++.+|+|.+.... ..+++.+|++++. +|+|+++++++ +..+...
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~----~~~~~~~ 73 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGS----YFKNTDL 73 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeee----eecCCcE
Confidence 578888999999999999999865 7899999986422 1578999999886 77888777777 6677888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. +++.|+++++++.+||+|||++......
T Consensus 74 ~l~~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 74 WIVMEYC-GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred EEEEecC-CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 8999999 7778776652 5677888889999999999999876543
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++|||||||+++||+||+.|+......... ........+.+. .
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------~~~~~~~~~~~~-----~ 221 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------FMIPNKPPPTLS-----D 221 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------hhhccCCCCCCC-----c
Confidence 3222334456555 5899999999999999999998643211100 000000011111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~P~~Rps 246 (256)
T cd06612 222 PEKWSPEFNDFVKKCLVKDPEERPS 246 (256)
T ss_pred hhhcCHHHHHHHHHHHhcChhhCcC
Confidence 1112234677888999999999944
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=191.08 Aligned_cols=196 Identities=19% Similarity=0.298 Sum_probs=135.9
Q ss_pred hcccceeecccceeEEEEEEeCC--CcEEEEEecccccC-------CCcchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS--SKVIALKKLHHWEN-------EEPASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~--g~~vAvK~~~~~~~-------~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
+|+..+.||+|+||.||+|.... ++.+|+|.+..... .......++.+|+.++. +|+|+++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~--- 77 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKT--- 77 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEee---
Confidence 46777889999999999999855 67899998864321 12234456788888775 67888887777
Q ss_pred eecCCccchhhhhhcccchhhhhhhc--------------------------------------cCccccccccCCceEE
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI--------------------------------------MKPLSWIGLRELEAFV 282 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~~~~ki 282 (408)
+..+...++++||+ +++++.+++. +++.|+++++++.+||
T Consensus 78 -~~~~~~~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l 155 (269)
T cd08528 78 -FLENDRLYIVMDLI-EGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTI 155 (269)
T ss_pred -EccCCeEEEEEecC-CCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEE
Confidence 77788889999998 7777755431 5566777888999999
Q ss_pred eecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc
Q 037624 283 ADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV 350 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 350 (408)
+|||++....... ......|+..| .++|||||||++|||++|+.|+...... .....+
T Consensus 156 ~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~---------~~~~~~ 225 (269)
T cd08528 156 TDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML---------SLATKI 225 (269)
T ss_pred ecccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH---------HHHHHH
Confidence 9999998764432 22334555555 6899999999999999999998532111 111122
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.+....+.. . ......+.+++.+||+.||++|+
T Consensus 226 ~~~~~~~~~-~--~~~~~~l~~li~~cl~~~p~~Rp 258 (269)
T cd08528 226 VEAVYEPLP-E--GMYSEDVTDVITSCLTPDAEARP 258 (269)
T ss_pred hhccCCcCC-c--ccCCHHHHHHHHHHCCCCCccCC
Confidence 222211100 0 01223466788899999999993
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-23 Score=193.96 Aligned_cols=201 Identities=20% Similarity=0.303 Sum_probs=139.7
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.+|...+.||+|+||.||+|... ++..+|+|.+... .....+.|.+|++++. +|+|++++.++ +.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~ 77 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGV----CG 77 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEE----Ec
Confidence 46778899999999999999852 3456899998642 2233467899999887 78888888877 77
Q ss_pred CCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLSWIG 274 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l 274 (408)
.....++++||+ ++++|.+++ +++|.|+++
T Consensus 78 ~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~ 156 (291)
T cd05094 78 DGDPLIMVFEYM-KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV 156 (291)
T ss_pred cCCceEEEEecC-CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE
Confidence 778889999999 787776553 168888889
Q ss_pred ccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCc
Q 037624 275 LRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSS 339 (408)
Q Consensus 275 ~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 339 (408)
++++.+||+|||+++........ .....|+..| .++|||||||+++||+| |+.||.....
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 231 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN----- 231 (291)
T ss_pred ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 99999999999999765432211 1122334444 68999999999999999 9999753211
Q ss_pred cccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC--CCccccc
Q 037624 340 SSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM--QKPFHEI 393 (408)
Q Consensus 340 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm--~~~~~~~ 393 (408)
......+........ ...+...+.+++.+||+.+|++|+ .+++.++
T Consensus 232 ----~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l 279 (291)
T cd05094 232 ----TEVIECITQGRVLER----PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279 (291)
T ss_pred ----HHHHHHHhCCCCCCC----CccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 111111111111110 112344577899999999999994 4444433
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-23 Score=192.92 Aligned_cols=203 Identities=18% Similarity=0.206 Sum_probs=139.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||++... +|+.||+|.+.... .....+.|.+|++++. +|+|++++.++ +......
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~ 78 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGA----FLNENNI 78 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeee----EecCCEE
Confidence 46777889999999999999974 58899999886432 2334678999999886 78888888877 7777888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|..++. ++|.|+++++++.++|+|||+++.....
T Consensus 79 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 79 CMCMEFM-DCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEEEecC-CCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999 8888765441 4667777888999999999998754221
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCC--ccccccchhhhccCCCCCCccc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS--SSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
. .....||..| .++|||||||+++|++||+.||+........ ...........+........
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL-- 233 (284)
T ss_pred c--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC--
Confidence 1 1223456555 6899999999999999999998743211000 00000001112221111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
...+....+.+++..|++.||++|+
T Consensus 234 -~~~~~~~~~~~li~~~l~~dp~~Rp 258 (284)
T cd06620 234 -PSSDFPEDLRDFVDACLLKDPTERP 258 (284)
T ss_pred -CchhcCHHHHHHHHHHhcCCcccCc
Confidence 0112334577888999999999993
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=181.54 Aligned_cols=202 Identities=20% Similarity=0.222 Sum_probs=152.5
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCC-----cchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEE-----PASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~-----~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
--+.|...+++|.|..++|-++.. ++|+..|+|++....... ....++-.+|+.+|. .||++..+..+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~--- 91 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV--- 91 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee---
Confidence 345677788999999999999987 558889999996533211 123455678999987 67777777776
Q ss_pred eecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
+..+...++|++.| +.|.|++++. +||.|+++++++++||+|||+
T Consensus 92 -yes~sF~FlVFdl~-prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 92 -YESDAFVFLVFDLM-PRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred -ccCcchhhhhhhhc-ccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccce
Confidence 77888999999999 9999999993 799999999999999999999
Q ss_pred ccccCCCCCeeeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
|..+.+.. .....+||+|| ..+|.||.|||++-|+.|.+||.... +-..+.-
T Consensus 170 a~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk---------QmlMLR~ 239 (411)
T KOG0599|consen 170 ACQLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK---------QMLMLRM 239 (411)
T ss_pred eeccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH---------HHHHHHH
Confidence 99886543 34567999999 57999999999999999999985321 1111223
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
++.....-. .+.+.+....+.+++..|++.||.+|++
T Consensus 240 ImeGkyqF~-speWadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 240 IMEGKYQFR-SPEWADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred HHhcccccC-CcchhhccccHHHHHHHHHeeCchhccc
Confidence 333322211 1333444556778889999999999954
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=199.01 Aligned_cols=190 Identities=19% Similarity=0.246 Sum_probs=129.9
Q ss_pred ecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 180 FGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
||+|+||+||+|+.. +++.||||++.............+..|..++. .|++++.+... +......++++|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~----~~~~~~~~lv~e 76 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFS----FQTDSDLYLVTD 76 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEE----EecCCeEEEEEc
Confidence 799999999999974 58899999986532222222344556666553 46777766666 666778899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++|+|..++. +||.|++++.++.+||+|||+++...........
T Consensus 77 ~~-~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~ 155 (330)
T cd05586 77 YM-SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNT 155 (330)
T ss_pred CC-CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccC
Confidence 99 8888876552 7889999999999999999999764333323334
Q ss_pred cccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 301 LAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 301 ~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
..||..| .++|||||||+++||+||+.||...... .....+.......+. .. ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~---------~~~~~i~~~~~~~~~-~~---~~ 222 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ---------QMYRNIAFGKVRFPK-NV---LS 222 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH---------HHHHHHHcCCCCCCC-cc---CC
Confidence 5677766 6799999999999999999998642110 111111111111110 00 12
Q ss_pred HHHHHHHHhhccCCCCCcCC
Q 037624 368 VLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+++..|++.+|++|++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~ 242 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLG 242 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCC
Confidence 23457778999999999953
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-23 Score=189.75 Aligned_cols=193 Identities=18% Similarity=0.271 Sum_probs=134.6
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...++||+|+||.||+|...+++.||+|.+.... ....+|.+|+.++. +|+|++++.++ . .....+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~----~-~~~~~~ 76 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS----MSPEAFLAEANLMKQLQHPRLVRLYAV----V-TQEPIY 76 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC----CcHHHHHHHHHHHHhcCCcCeeeEEEE----E-ccCCcE
Confidence 5688889999999999999999889999999987432 23467899999886 67776666554 3 344578
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. ++|.|+++++++.++|+|||+++.....
T Consensus 77 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 77 IITEYM-ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEcC-CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 899998 7888876641 6778888889999999999999876422
Q ss_pred CCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... .....++..| .++|||||||+++|++| |+.||...... . ..+.+......+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---------~-~~~~~~~~~~~~~- 224 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP---------E-VIQNLERGYRMPR- 224 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH---------H-HHHHHHcCCCCCC-
Confidence 211 1122233344 58999999999999999 99998632210 0 1111111111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+|++.+|++|++
T Consensus 225 --~~~~~~~~~~li~~~l~~~p~~Rp~ 249 (260)
T cd05067 225 --PDNCPEELYELMRLCWKEKPEERPT 249 (260)
T ss_pred --CCCCCHHHHHHHHHHccCChhhCCC
Confidence 0112345778889999999999954
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-23 Score=194.75 Aligned_cols=200 Identities=18% Similarity=0.206 Sum_probs=138.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||++... .++.||+|.+...........+.+.+|++++. +|+|++++++. +..+...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~ 76 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCS----FETKRHL 76 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEE----EecCCEE
Confidence 46888899999999999999984 47899999987543222334567888988886 78888877776 6677788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|..++. ++|.|+++++++.+|++|||+++......
T Consensus 77 ~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 77 CMVMEYV-EGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999 8888876652 67888889999999999999987421100
Q ss_pred C---------------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhh
Q 037624 296 S---------------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 296 ~---------------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
. ......|+..| .++|||||||+++||+||+.||..... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~---------~~~~~ 226 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---------EELFG 226 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHH
Confidence 0 00123455555 689999999999999999999853211 00111
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+... ......+.+++..||+.+|++|++
T Consensus 227 ~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~ 263 (305)
T cd05609 227 QVISDDIEWPEGD--EALPADAQDLISRLLRQNPLERLG 263 (305)
T ss_pred HHHhcccCCCCcc--ccCCHHHHHHHHHHhccChhhccC
Confidence 1111111100000 012334678889999999999944
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=191.55 Aligned_cols=195 Identities=22% Similarity=0.336 Sum_probs=139.7
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|... ++..||+|.+... .....+.|.+|++++. +|+|++++++. +..+..
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 76 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEA----YFYENK 76 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEE----EecCCe
Confidence 467888899999999999999984 5889999998642 2334567999999886 78888877777 667778
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ +++++..++. ++|.|++++.++.++|+|||++.....
T Consensus 77 ~~lv~e~~-~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 77 LWILIEFC-DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred EEEEeecc-CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 89999999 8888776652 577888888999999999999876543
Q ss_pred CCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC---C
Q 037624 294 DSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD---P 353 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d---~ 353 (408)
.........||..| .++|||||||++|||++|+.||....... ....+.. +
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~ 226 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR---------VLLKILKSEPP 226 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH---------HHHHHhcCCCC
Confidence 32222233455444 47999999999999999999986432111 1111111 1
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+..+ ......+.+++..||+.+|++|++
T Consensus 227 ~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps 255 (280)
T cd06611 227 TLDQP-----SKWSSSFNDFLKSCLVKDPDDRPT 255 (280)
T ss_pred CcCCc-----ccCCHHHHHHHHHHhccChhhCcC
Confidence 11111 112234667888999999999943
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-24 Score=189.74 Aligned_cols=214 Identities=19% Similarity=0.225 Sum_probs=150.7
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
-++|+..++||+|.||.|-.++- ..|+.+|+|++++.-.........-..|-++|. +||-+..+--. ....+.
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs----FQt~dr 242 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS----FQTQDR 242 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh----hccCce
Confidence 36788899999999999999987 458999999998754433333344567888885 56554443322 566777
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
..+||||. .+|.|+-++. +|..|.++|.|+++||+|||+++.--..
T Consensus 243 lCFVMeya-nGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 243 LCFVMEYA-NGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEEEEEc-cCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 88899999 8888887773 6778889999999999999999986666
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.....+.+||+.| ..+|.|..|||+|||++||.||.... .+....-++-..++-| ..
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d---------h~kLFeLIl~ed~kFP--r~ 390 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD---------HEKLFELILMEDLKFP--RT 390 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc---------hhHHHHHHHhhhccCC--cc
Confidence 6667889999999 78999999999999999999986421 1111112222222221 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCc----CCCcccccchHHHhhhcc
Q 037624 363 VVRDIVLVSTILFACLRSNPKTP----MQKPFHEISISELRNQEM 403 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~R----m~~~~~~~~~~~~~~~~~ 403 (408)
...+.+. +...-+.+||.+| ..++.+..+...+.+..|
T Consensus 391 ls~eAkt---LLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 391 LSPEAKT---LLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred CCHHHHH---HHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 1123332 3344678999999 555555556566655444
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=197.32 Aligned_cols=199 Identities=17% Similarity=0.216 Sum_probs=132.3
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC 242 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~ 242 (408)
+.|...+.||+|+||.||+|... .++.||+|+++... .....+.+.+|++++. .|+|+++++++ +.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~---~~ 81 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA---CT 81 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee---Ee
Confidence 46888899999999999999742 24789999986422 1223456788998885 56777777665 23
Q ss_pred cCCccchhhhhhcccchhhhhhh---------------------------------------------------------
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM--------------------------------------------------------- 265 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l--------------------------------------------------------- 265 (408)
..+...++++||+ ++++|.+++
T Consensus 82 ~~~~~~~~v~ey~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 82 KPGGPLMVIVEYC-KFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred cCCCCEEEEEecC-CCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 3445667888888 777665432
Q ss_pred -------------------------------------ccCccccccccCCceEEeecccccccCCCCCe--eeecccCCC
Q 037624 266 -------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYG 306 (408)
Q Consensus 266 -------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~ 306 (408)
++||.|+++++++++||+|||+++.+...... .....++..
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 27888888999999999999999876432211 112233444
Q ss_pred C------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHH
Q 037624 307 Y------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTI 373 (408)
Q Consensus 307 y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 373 (408)
| .++|||||||+++||+| |+.||...... ..+...+........ .......+.++
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~~~l 308 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID---------EEFCRRLKEGTRMRA---PEYATPEIYSI 308 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc---------HHHHHHHhccCCCCC---CccCCHHHHHH
Confidence 4 68999999999999998 99998632110 001111111111100 01223457788
Q ss_pred HHhhccCCCCCcCCC
Q 037624 374 LFACLRSNPKTPMQK 388 (408)
Q Consensus 374 ~~~C~~~~P~~Rm~~ 388 (408)
+.+||+.+|++|++.
T Consensus 309 ~~~cl~~~p~~RPs~ 323 (337)
T cd05054 309 MLDCWHNNPEDRPTF 323 (337)
T ss_pred HHHHccCChhhCcCH
Confidence 999999999999553
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=186.59 Aligned_cols=156 Identities=21% Similarity=0.244 Sum_probs=114.1
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc-
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA- 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~- 246 (408)
...|...++||+|.||+||+|+. .+|+.||+|++...... ...-....+|+.++. +|.|+ ++.+++++.....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~ 86 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNH 86 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcc--eEEEEeeeeecccc
Confidence 34566667899999999999997 56889999999865432 234456689999986 77773 4444444333332
Q ss_pred ----cchhhhhhcccchhhhhhh-------------------------------------ccCccccccccCCceEEeec
Q 037624 247 ----CFWFMNTWRGEACSVFCTM-------------------------------------IMKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 247 ----~~~lv~e~~~~~g~l~~~l-------------------------------------~~k~~~~~l~~~~~~ki~Df 285 (408)
..++++||+. -+|..++ ++||.|+++++++..||+||
T Consensus 87 ~~~~~l~lvfe~~d--~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 87 RGIGKLYLVFEFLD--RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred cccceEEEEEEeec--ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeecc
Confidence 6677887752 1111111 28999999999999999999
Q ss_pred ccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+|+...-.....+..++|.+| ...||||+|||+.||++++.-|..
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG 223 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPG 223 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCC
Confidence 9999876454445555666666 789999999999999998887754
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-23 Score=188.22 Aligned_cols=218 Identities=17% Similarity=0.235 Sum_probs=164.2
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|.-|+||.+++.+ +...|+|++.+..............|-+||+ .||-++.|+.. ...+...
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~----fet~~~~ 152 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS----FETDKYS 152 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe----eecccee
Confidence 467777899999999999999965 5789999998765444444555667777776 89999999988 8888999
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
+++|||+ ++|+|+..+. +||.|+++.++|++-++||-|+.....
T Consensus 153 cl~meyC-pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 153 CLVMEYC-PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEEEecC-CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 9999999 9999988773 799999999999999999999853210
Q ss_pred ---------------------------------CCC-----------------------eeeecccCCCC----------
Q 037624 294 ---------------------------------DSS-----------------------NLTLLAGTYGY---------- 307 (408)
Q Consensus 294 ---------------------------------~~~-----------------------~~~~~~gt~~y---------- 307 (408)
... .....+||-.|
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 000 01235788888
Q ss_pred --cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 308 --EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 308 --~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
.++|+|+|||++|||+.|+.||.. ......+..++-..+.-+... .....+.+|+..-+.+||.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG---------~~~~~Tl~NIv~~~l~Fp~~~---~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKG---------SNNKETLRNIVGQPLKFPEEP---EVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCC---------CCchhhHHHHhcCCCcCCCCC---cchhHHHHHHHHHhccChhhh
Confidence 789999999999999999999973 345556777777666543222 334456677788899999999
Q ss_pred CC---CcccccchHHHhhhccccc
Q 037624 386 MQ---KPFHEISISELRNQEMYFI 406 (408)
Q Consensus 386 m~---~~~~~~~~~~~~~~~~~~~ 406 (408)
.. -+.+.-+++.+..-.|++|
T Consensus 380 lg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 380 LGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred hccccchHHhhcCccccCCChhhe
Confidence 32 2222334466677777765
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=197.78 Aligned_cols=153 Identities=20% Similarity=0.215 Sum_probs=113.6
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc---
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA--- 246 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~--- 246 (408)
+|+..+.||+|+||.||+|.. .+|+.||||++.... .+....+.+.+|++++. +|+|+++++++ +....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~~~~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDI----LQPPHIDP 75 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhhe----ecCCCccc
Confidence 477789999999999999997 468999999986432 22234567889999886 88888888777 44433
Q ss_pred --cchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 247 --CFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 --~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||+ . +++...+ ++||.|+++++++.+||+|||+++..
T Consensus 76 ~~~~~lv~e~~-~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 76 FEEIYVVTELM-Q-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred cceEEEEeecc-c-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 567888887 4 2333322 17899999999999999999999865
Q ss_pred CCCCC-eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 292 YCDSS-NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 292 ~~~~~-~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
..... ..+...+|..| .++|||||||+++||+||+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 43221 11223445444 5789999999999999999998643
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-23 Score=193.90 Aligned_cols=201 Identities=19% Similarity=0.260 Sum_probs=150.1
Q ss_pred HhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--c-cCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--P-KYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-~~n~~~l~~~~~~~~~~~~ 246 (408)
.+.|+..+.||+|.||.||+++.+. |+.+|+|.+.+...........+.+|+++|. . |+|++.+.+. +....
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~----~e~~~ 109 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA----FEDPD 109 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE----EEcCC
Confidence 3457777899999999999999865 9999999998755444445678999999997 3 7777777777 66777
Q ss_pred cchhhhhhcccchhhhhhhc--------------------------------cCccccccc----cCCceEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGL----RELEAFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~----~~~~~ki~DfGla~~ 290 (408)
..++|+|++ .+|.|++.+. +||.|+++. .++.+|++|||+|+.
T Consensus 110 ~~~lvmEL~-~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELC-EGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEec-CCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 899999999 8999887762 677887766 235899999999998
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
... .......+||+.| ..+||||.||++|.|++|.+||..... ......+....+.-+
T Consensus 189 ~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~---------~~~~~~i~~~~~~f~ 258 (382)
T KOG0032|consen 189 IKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE---------FEIFLAILRGDFDFT 258 (382)
T ss_pred ccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh---------hHHHHHHHcCCCCCC
Confidence 866 5566788999999 789999999999999999999964321 111223333322111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. +........+-+++..++..||..|++
T Consensus 259 ~-~~w~~is~~akd~i~~ll~~dp~~R~t 286 (382)
T KOG0032|consen 259 S-EPWDDISESAKDFIRKLLEFDPRKRLT 286 (382)
T ss_pred C-CCccccCHHHHHHHHHhcccCcccCCC
Confidence 0 111222334456778899999999955
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-23 Score=188.61 Aligned_cols=200 Identities=19% Similarity=0.256 Sum_probs=136.9
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+. .+++.||+|.++... ......+.+|+.++. +|+|++++.+. +.....
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~----~~~~~~ 80 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGS----YLRRDK 80 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEE----EEeCCE
Confidence 34777788999999999999987 458899999986432 223456788888876 78888888777 666778
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++++|.+++. ++|.|++++.++.+||+|||++......
T Consensus 81 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 81 LWICMEFC-GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred EEEEEecc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 89999999 8888876542 6788888889999999999998765432
Q ss_pred CCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 295 SSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 295 ~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
........||..| .++|||||||+++||++|+.|+............. ......+....
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~-- 233 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT----KSNFQPPKLKD-- 233 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh----ccCCCCCcccc--
Confidence 2222233455544 57999999999999999999975322110000000 00001111110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.+|++|++
T Consensus 234 ---~~~~~~~~~~li~~~l~~~P~~R~~ 258 (267)
T cd06645 234 ---KMKWSNSFHHFVKMALTKNPKKRPT 258 (267)
T ss_pred ---cCCCCHHHHHHHHHHccCCchhCcC
Confidence 0011234668889999999999954
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.1e-23 Score=186.98 Aligned_cols=193 Identities=18% Similarity=0.282 Sum_probs=135.0
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|+..++..||+|++.... ...+.|.+|++++. +|+|++++.++ .. ....+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~~~----~~-~~~~~ 76 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAV----VS-EEPIY 76 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc----cCHHHHHHHHHHHHhCCCCCcceEEEE----EC-CCCcE
Confidence 5688889999999999999998777789999997522 12467899999886 77777777665 33 34567
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ +++++.+++. ++|.|+++++++.+||+|||+++.....
T Consensus 77 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 77 IVTEYM-SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEEEcC-CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 999999 8888776652 6788888889999999999999866433
Q ss_pred CCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... ....++..| .++|||||||+++||+| |+.||..... ......+ ......+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---------~~~~~~~-~~~~~~~-- 223 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV-ERGYRMP-- 223 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---------HHHHHHH-hcCCCCC--
Confidence 2111 122333344 58999999999999999 8888753211 0111111 1111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+....+.+++..|++.+|++|++
T Consensus 224 -~~~~~~~~l~~li~~~l~~~p~~Rp~ 249 (262)
T cd05071 224 -CPPECPESLHDLMCQCWRKEPEERPT 249 (262)
T ss_pred -CccccCHHHHHHHHHHccCCcccCCC
Confidence 11234456789999999999999954
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=192.87 Aligned_cols=197 Identities=20% Similarity=0.227 Sum_probs=136.0
Q ss_pred HHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
.+++|+..+.||+|+||.||+|... .+..||+|.+.... .......+.+|+.++. +|+|+++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~---- 77 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGV---- 77 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEE----
Confidence 4678899999999999999999753 24579999986422 2223456888988886 78888888777
Q ss_pred ecCCccchhhhhhcccchhhhhhhc-------------------------------------------cCccccccccCC
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI-------------------------------------------MKPLSWIGLREL 278 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------~k~~~~~l~~~~ 278 (408)
+......++++||+ ++|+|.+++. ++|.|+++++++
T Consensus 78 ~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~ 156 (288)
T cd05061 78 VSKGQPTLVVMELM-AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF 156 (288)
T ss_pred EcCCCCcEEEEeCC-CCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCC
Confidence 66777889999998 7777776651 577888888999
Q ss_pred ceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccc
Q 037624 279 EAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 343 (408)
.+|++|||+++......... ....++..| .++|||||||+++||++ |+.|+.... .
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~---------~ 227 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS---------N 227 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC---------H
Confidence 99999999998653221111 111223333 68999999999999999 788875321 1
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
......+.+...... ...+...+.+++..|++.+|++|+
T Consensus 228 ~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp 266 (288)
T cd05061 228 EQVLKFVMDGGYLDQ----PDNCPERVTDLMRMCWQFNPKMRP 266 (288)
T ss_pred HHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCChhHCc
Confidence 111122222222110 112234677889999999999993
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=185.67 Aligned_cols=196 Identities=16% Similarity=0.240 Sum_probs=139.3
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||.++. .+++.+++|++..... +....+.+.+|++++. +|+|++++.++ +......+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNH----FMDDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeE----EecCCeEE
Confidence 367789999999999999886 4588999999865332 2344667899999986 67777777666 66677888
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.....
T Consensus 76 ~~~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 76 IEMEYA-NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred EEEEec-CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 999999 8887776652 5677777888999999999999876443
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++||||||++++||++|+.|++.... ......+........
T Consensus 155 ~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~~~---- 221 (256)
T cd08221 155 YSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---------LNLVVKIVQGNYTPV---- 221 (256)
T ss_pred cccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHcCCCCCC----
Confidence 3223334566665 579999999999999999999864211 111112222222111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~s 246 (256)
T cd08221 222 VSVYSSELISLVHSLLQQDPEKRPT 246 (256)
T ss_pred ccccCHHHHHHHHHHcccCcccCCC
Confidence 0122344667888999999999954
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-23 Score=191.79 Aligned_cols=196 Identities=17% Similarity=0.259 Sum_probs=135.4
Q ss_pred hcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+|...+.||+|+||.||+|+.. ....+|+|.+.... .....+.+.+|+.++. +|+|++++++. +..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGA----CSQ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEE----Eec
Confidence 3667789999999999999862 23578999886432 2233567899999887 78888888777 777
Q ss_pred Cccchhhhhhcccchhhhhhh---------------------------------------------------------cc
Q 037624 245 DACFWFMNTWRGEACSVFCTM---------------------------------------------------------IM 267 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l---------------------------------------------------------~~ 267 (408)
....++++||+ .+++|.+++ ++
T Consensus 75 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~di 153 (290)
T cd05045 75 DGPLLLIVEYA-KYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDL 153 (290)
T ss_pred CCCcEEEEEec-CCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence 77888899998 777776542 16
Q ss_pred CccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCccc
Q 037624 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELL 332 (408)
Q Consensus 268 k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~ 332 (408)
+|.|+++++++.+||+|||+++........ .....++..| .++||||||++++||+| |+.|+...
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 788888999999999999999865332211 1112233333 67999999999999999 99998532
Q ss_pred ccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 333 SSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.. ..+.+.+......+. .......+.+++..|++.+|++|++.
T Consensus 234 ~~----------~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~cl~~~P~~Rp~~ 276 (290)
T cd05045 234 AP----------ERLFNLLKTGYRMER---PENCSEEMYNLMLTCWKQEPDKRPTF 276 (290)
T ss_pred CH----------HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHccCCcccCCCH
Confidence 11 112222222221111 11223457788999999999999553
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=189.27 Aligned_cols=197 Identities=21% Similarity=0.260 Sum_probs=135.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||.||+|+.. +++.||+|.+... +....+.+.+|++++. .|+|++++.+. +..+...
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 84 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGA----FYWDGKL 84 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEE----EEeCCeE
Confidence 46777889999999999999985 4889999998642 3334677889998886 77777777776 5666788
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ +++++...+. ++|.|++++.++.+||+|||++......
T Consensus 85 ~lv~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 85 WIMIEFC-PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred EEEEecC-CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999 7887765431 6788888988999999999998754322
Q ss_pred CCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 295 SSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 295 ~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
........|+..| .++|||||||++|||+||+.|+........ .........+....
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~ 237 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSEPPTLSQ 237 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH------HHHHhcCCCccCCC
Confidence 1111222334333 479999999999999999999864321100 00001111111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 238 -----~~~~~~~~~~li~~~l~~~p~~Rp~ 262 (292)
T cd06644 238 -----PSKWSMEFRDFLKTALDKHPETRPS 262 (292)
T ss_pred -----CcccCHHHHHHHHHHhcCCcccCcC
Confidence 1122334667889999999999944
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-23 Score=190.14 Aligned_cols=196 Identities=23% Similarity=0.343 Sum_probs=139.4
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||.|+||.||+|+.. +++.||+|.+.... .......+.+|++++. +|+|++++.++ +..+...+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 75 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGS----FLKGSKLW 75 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEE----EEECCeEE
Confidence 5777788999999999999985 58899999986532 2234567889998886 78888777776 66677888
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++||+ ++++|.+++. ++|.|+++++++.++|+|||+++........
T Consensus 76 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 76 IIMEYC-GGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EEEEee-CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 999999 8888777663 5677777889999999999999887543222
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....|+..| .++|||||||++|||+||+.|+........ ...+.....+.+.. . .
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~---~---~ 222 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV------LFLIPKNNPPSLEG---N---K 222 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH------HHHhhhcCCCCCcc---c---c
Confidence 2334566555 689999999999999999999864321100 00001111111111 0 0
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..|+..+|++|++
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt 244 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPS 244 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcC
Confidence 2234667888999999999944
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.1e-23 Score=189.00 Aligned_cols=195 Identities=22% Similarity=0.289 Sum_probs=135.4
Q ss_pred cccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|+||.||+|.... +..+|+|.+... .....+.|.+|++++. .|+|+++++++ +..+...++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~----~~~~~~~~~ 79 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDA----FYYENNLWI 79 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEE----EeeCCEEEE
Confidence 5667889999999999999854 778899998642 2234567889998886 78888887777 666778889
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||. +++++...+. ++|.|++++.++++||+|||+++.......
T Consensus 80 v~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 80 LIEFC-AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred EEEec-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99998 7777765431 678888899999999999999876533222
Q ss_pred eeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 297 NLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 297 ~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
......||..| .++|||||||++|||++|+.|+........ .........+.+..+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~- 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSEPPTLAQP- 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHHHhhcCCCCCCCc-
Confidence 22233455555 479999999999999999999864321110 000001111111111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..||+.+|++|++
T Consensus 232 ----~~~~~~~~~li~~~l~~~p~~Rp~ 255 (282)
T cd06643 232 ----SRWSSEFKDFLKKCLEKNVDARWT 255 (282)
T ss_pred ----cccCHHHHHHHHHHccCChhhCcC
Confidence 112234668889999999999944
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=184.71 Aligned_cols=199 Identities=20% Similarity=0.330 Sum_probs=138.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|++++. +|+|++++.++ .......
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~ 75 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGS----YLRRDKL 75 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEE----EEeCCEE
Confidence 57888899999999999999984 57789999987532 224578899999886 88888888777 6667778
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||. +++++..++. ++|.|+++++++.+||+|||++......
T Consensus 76 ~l~~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 76 WIVMEYC-GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EEEEeCC-CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 8899998 7777665541 6788888999999999999998765432
Q ss_pred CCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 295 SSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 295 ~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
........|+..| .++|||||||+++||+||+.|+....... .........+..+.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~---------~~~~~~~~~~~~~~ 225 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR---------ALFLISKSNFPPPK 225 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHHhccCCCcc
Confidence 2111222333333 57999999999999999999986432110 00001001001000
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..........+.+++.+||+.+|++||+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt 253 (262)
T cd06613 226 LKDKEKWSPVFHDFIKKCLTKDPKKRPT 253 (262)
T ss_pred ccchhhhhHHHHHHHHHHcCCChhhCCC
Confidence 0111223445778899999999999955
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-23 Score=189.15 Aligned_cols=196 Identities=16% Similarity=0.258 Sum_probs=133.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.++|+..+.||+|+||+||+|++ ++|+ .||+|.++... .....+.+.+|+.++. .|+|+++++++ +.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGI----CL 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEE----Ec
Confidence 35788889999999999999986 4454 48999986432 2334567888988886 78888887776 55
Q ss_pred CCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
.. ..+++++|+ ++|++.+++. ++|.|+++.+++.+||+|||+++
T Consensus 80 ~~-~~~l~~~~~-~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 80 TS-TVQLVTQLM-PYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred CC-CcEEEEEcC-CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 43 456788888 7777776652 68888889889999999999998
Q ss_pred ccCCCCCeee--ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC
Q 037624 290 HLYCDSSNLT--LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 290 ~~~~~~~~~~--~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
.......... ...++..| .++|||||||++|||+| |..|++.... ..+...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----------~~~~~~~~~~ 227 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA----------REIPDLLEKG 227 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----------HHHHHHHHCC
Confidence 7643322111 11223334 68999999999999999 8999863211 0111111111
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+. .......+.+++..||+.||++|++
T Consensus 228 ~~~~~---~~~~~~~~~~li~~~l~~dp~~Rp~ 257 (279)
T cd05109 228 ERLPQ---PPICTIDVYMIMVKCWMIDSECRPR 257 (279)
T ss_pred CcCCC---CccCCHHHHHHHHHHcCCChhhCcC
Confidence 11100 1123345678889999999999944
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-23 Score=188.11 Aligned_cols=196 Identities=15% Similarity=0.221 Sum_probs=137.8
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++.. .+|+.||+|++..... .....+++.+|+.++. +|+|++++.++ +......+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQES----FEENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEee----ecCCCeEE
Confidence 367789999999999999987 4588999999865322 2234567899999886 78887777776 67777889
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ +++++.+++. +++.|++++.++.++|+|||++......
T Consensus 76 lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 76 IVMDYC-EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred EEEecC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 999999 7777765542 5667777888899999999999866433
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++|||||||+++||+||+.|+..... ......+....... .
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~~----~ 221 (256)
T cd08218 155 VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---------KNLVLKIIRGSYPP----V 221 (256)
T ss_pred hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---------HHHHHHHhcCCCCC----C
Confidence 2222223455555 689999999999999999999863211 11111222211111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~ 246 (256)
T cd08218 222 SSHYSYDLRNLVSQLFKRNPRDRPS 246 (256)
T ss_pred cccCCHHHHHHHHHHhhCChhhCcC
Confidence 1122345678889999999999933
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-23 Score=190.70 Aligned_cols=196 Identities=17% Similarity=0.233 Sum_probs=139.3
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||.|+||.||+|.. .+|+.||+|.+.... ....+.+.+|++++. +|+|++.++++ +......+
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~~ 92 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDS----FLVGDELF 92 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeee----EecCceEE
Confidence 588889999999999999986 568899999986432 223567888999886 78888888777 66777889
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++||+ ++++|..++. ++|.|++++.++.+||+|||+++........
T Consensus 93 lv~e~~-~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 93 VVMEYL-AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred EEEEec-CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 999999 8888876542 6788888989999999999998876443322
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....|+..| .++|||||||++|||+||+.||......... ........+.+.. ...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~~~~~~~~-----~~~ 240 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGTPELQN-----PEK 240 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcCCcccCC-----ccc
Confidence 2333455555 6799999999999999999998643211100 0000000011111 111
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..||+.+|++|++
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt 262 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGS 262 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCC
Confidence 2234567888999999999944
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-23 Score=192.97 Aligned_cols=198 Identities=15% Similarity=0.236 Sum_probs=137.8
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.++|...+.||+|+||.||+|.. ..+..||||+++... .....+.+.+|++++. +|+|+++++++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~---- 107 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGA---- 107 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEE----
Confidence 35788899999999999999974 134579999987532 2233567899999886 58888888877
Q ss_pred ecCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfG 286 (408)
+......++++||+ ++++|..++. ++|.|++++.+..+|++|||
T Consensus 108 ~~~~~~~~lv~e~~-~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 108 CTIGGPILVITEYC-CYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred EecCCceEEEEEcC-CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCc
Confidence 77777889999999 8787776542 67888888899999999999
Q ss_pred cccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhcc
Q 037624 287 MTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVL 351 (408)
Q Consensus 287 la~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 351 (408)
+++......... ....++..| .++|||||||+++||+| |+.|+..... .......+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~---------~~~~~~~~ 257 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV---------DSKFYKLI 257 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc---------hHHHHHHH
Confidence 998664332111 112234444 57999999999999998 9999863221 11111222
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 352 DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 352 d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+......... .....+.+++..|++.+|++|++
T Consensus 258 ~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt 290 (302)
T cd05055 258 KEGYRMAQPE---HAPAEIYDIMKTCWDADPLKRPT 290 (302)
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHcCCCchhCcC
Confidence 2211111001 11235778899999999999944
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-23 Score=193.23 Aligned_cols=199 Identities=18% Similarity=0.260 Sum_probs=142.8
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|...+ ++.||+|.+...........+.+..|++++. .|+|++++++. +......
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~ 76 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYAS----FQTETYL 76 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheee----eecCCEE
Confidence 367888999999999999999854 8899999997643332234567889998886 78888888777 6677788
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||+ .+++|.+++. ++|.|++++.++.++|+|||++.....
T Consensus 77 ~lv~e~~-~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 77 CLVMDYC-PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEEEEec-CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 8999998 7777776542 678888899999999999999876532
Q ss_pred CCCe-----------------------------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 294 DSSN-----------------------------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 294 ~~~~-----------------------------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.... .....||..| .++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2110 0123566666 5899999999999999999998633
Q ss_pred ccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 333 SSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. ......+.+.....+. .......+.+++..|++.+|++|++
T Consensus 236 ~~---------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 236 NR---------DETFSNILKKEVTFPG---SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred ch---------HHHHHHHhcCCccCCC---ccccCHHHHHHHHHHccCCHhHCCC
Confidence 21 1122233332222111 0113445778889999999999955
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.3e-23 Score=185.97 Aligned_cols=195 Identities=16% Similarity=0.243 Sum_probs=138.4
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++... +++.+|+|.++... .....+.+.+|+.++. +|+|++++.+. +..+...+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKES----FEADGHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEE----EEECCEEE
Confidence 4677899999999999999974 58889999986432 2234567888988886 78888888777 66777889
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ +++++..++. ++|.|+++++++.++++|||+++.....
T Consensus 75 lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 75 IVMEYC-DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred EEEeeC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 999999 7777765541 6788888889999999999999876443
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++||||||++++||++|+.||....... ....+........
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~---- 220 (255)
T cd08219 154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN---------LILKVCQGSYKPL---- 220 (255)
T ss_pred ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH---------HHHHHhcCCCCCC----
Confidence 3222334566555 68999999999999999999986422110 0111111111110
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~ 245 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPS 245 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCC
Confidence 0112234567888999999999954
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=189.77 Aligned_cols=190 Identities=21% Similarity=0.270 Sum_probs=133.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||.||+|+.. +|+.||+|.+...........+++.+|++++. +|+|++++.++ +..+...
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~----~~~~~~~ 90 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGC----YLREHTA 90 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEE----EEeCCeE
Confidence 45777899999999999999984 58899999986543333344567889999886 78888887777 7777788
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++ ++.+.+ +++|.|+++++++.+||+|||+++.....
T Consensus 91 ~lv~e~~-~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 91 WLVMEYC-LG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred EEEHHhh-CC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 8999998 43 332221 16788888999999999999999765432
Q ss_pred CCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC---CCCC
Q 037624 295 SSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD---PRLS 356 (408)
Q Consensus 295 ~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d---~~l~ 356 (408)
.. ..|+..| .++|||||||++|||+||+.|+....... ....+.. +.+.
T Consensus 169 ~~----~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~---------~~~~~~~~~~~~~~ 235 (307)
T cd06607 169 NS----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---------ALYHIAQNDSPTLS 235 (307)
T ss_pred CC----ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH---------HHHHHhcCCCCCCC
Confidence 11 1222222 58999999999999999999985322110 0111111 1111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.......+.+++..||+.+|++|+
T Consensus 236 ------~~~~~~~~~~li~~~l~~~p~~Rp 259 (307)
T cd06607 236 ------SNDWSDYFRNFVDSCLQKIPQDRP 259 (307)
T ss_pred ------chhhCHHHHHHHHHHhcCChhhCc
Confidence 112334577888999999999993
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-23 Score=192.07 Aligned_cols=154 Identities=18% Similarity=0.246 Sum_probs=118.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++. +|+|++++.++ +..+...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLIEV----FRRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcCCcchhhHHHh----cccCCeE
Confidence 36778899999999999999985 488999999875332 2234567889999887 78898888888 7788889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ +++.+..+.. ++|.|+++++++.+||+|||+++......
T Consensus 76 ~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 76 YLVFEFV-DHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred EEEEecC-CccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 9999999 7766654431 57788888899999999999998654332
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...+...|+..| .++|||||||+++||+||+.|+..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 222222333333 579999999999999999998853
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-23 Score=189.47 Aligned_cols=198 Identities=17% Similarity=0.181 Sum_probs=128.7
Q ss_pred ccceeecccceeEEEEEEeCC-Cc--EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee--cCCcc
Q 037624 175 DIKYCFGTGGYGSVYIAQLTS-SK--VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC--IKDAC 247 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~~-g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~--~~~~~ 247 (408)
...+.||+|+||.||+|+..+ +. .||+|.++... ......+.|.+|++++. +|+|+++++++..... .....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 345789999999999999854 33 58999987532 23334577889998886 7888888887621101 11124
Q ss_pred chhhhhhcccchhhhhhh---------------------------------------ccCccccccccCCceEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTM---------------------------------------IMKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l---------------------------------------~~k~~~~~l~~~~~~ki~DfGla 288 (408)
.++++||+ ++|++..++ ++||.|+++++++.+||+|||++
T Consensus 81 ~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 81 PVVILPFM-KHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred cEEEEEeC-CCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 57788888 777765443 16888888999999999999999
Q ss_pred cccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCC
Q 037624 289 MHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 289 ~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
+......... ....++..| .++|||||||++|||++ |+.||...... .....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---------~~~~~~~~~ 230 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---------EIYDYLRQG 230 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---------HHHHHHHcC
Confidence 8764322111 111222223 68999999999999999 78888532110 001111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..... .......+.+++..||+.+|++|++
T Consensus 231 ~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps 260 (272)
T cd05075 231 NRLKQ----PPDCLDGLYSLMSSCWLLNPKDRPS 260 (272)
T ss_pred CCCCC----CCCCCHHHHHHHHHHcCCCcccCcC
Confidence 11000 0122344678899999999999943
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-23 Score=188.15 Aligned_cols=190 Identities=17% Similarity=0.243 Sum_probs=131.7
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
+.||+|+||.||+|+.. +++.||+|.+... ........|.+|++++. .|+|+++++++ +......++++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGV----CTQKQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEE----EcCCCCeEEEEee
Confidence 35999999999999984 6889999988642 22334567999998886 78888888777 7777888999999
Q ss_pred cccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCee--
Q 037624 255 RGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL-- 298 (408)
Q Consensus 255 ~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~-- 298 (408)
+ ++++|.+++. ++|.|++++.++.+|++|||+++.........
T Consensus 75 ~-~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 75 V-QGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred c-cCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9 7888877652 57888889899999999999987643221100
Q ss_pred eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 299 TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 299 ~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
....++..| .++|||||||+++||++ |..|+...... .....++.....+. ...
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~----------~~~~~~~~~~~~~~---~~~ 220 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ----------QTREAIEQGVRLPC---PEL 220 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH----------HHHHHHHcCCCCCC---ccc
Confidence 000111122 67999999999999998 88887532110 11111111111111 112
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..|++.+|++|++
T Consensus 221 ~~~~~~~li~~~l~~~p~~Rps 242 (252)
T cd05084 221 CPDAVYRLMERCWEYDPGQRPS 242 (252)
T ss_pred CCHHHHHHHHHHcCCChhhCcC
Confidence 2446778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-23 Score=188.75 Aligned_cols=199 Identities=21% Similarity=0.295 Sum_probs=137.9
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCC---CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENE---EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~---~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
+|...+.||+|+||.||+|...+|+.+|||.+...... .....+.+.+|++++. +|+|++++.++ +.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~ 76 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGT----CLDDNT 76 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeE----eecCCe
Confidence 35667889999999999999888999999998643211 1123456888999886 77777777777 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.....
T Consensus 77 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 77 ISIFMEFV-PGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 89999999 8888877752 6778888889999999999998764321
Q ss_pred C------CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 295 S------SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 295 ~------~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
. .......|+..| .++|||||||+++||+||+.||......... ..........+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 231 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM----FYIGAHRGLMPRLP 231 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH----HHhhhccCCCCCCC
Confidence 1 011223455555 6899999999999999999998643211100 00000000111221
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++..|++.+|++|++
T Consensus 232 ~-------~~~~~~~~~i~~~l~~~p~~Rp~ 255 (265)
T cd06631 232 D-------SFSAAAIDFVTSCLTRDQHERPS 255 (265)
T ss_pred C-------CCCHHHHHHHHHHhcCCcccCCC
Confidence 1 12234567888999999999943
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-23 Score=189.20 Aligned_cols=195 Identities=21% Similarity=0.300 Sum_probs=136.9
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
-|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.|.+|++++. +|+|+++++++ +..+...+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGS----YLKDTKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEE----EEeCCeEE
Confidence 366678899999999999987 468899999886432 2234567889999886 77887777777 67777889
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++||+ +++++..++. ++|.|++++.++.++|+|||+++........
T Consensus 79 lv~e~~-~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 79 IIMEYL-GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred EEEEeC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence 999999 8888877652 5677888888999999999999765433222
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....|+..| .++|||||||+++||+||+.|+....... ....+.... .. .....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---------~~~~~~~~~-~~---~~~~~ 224 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK---------VLFLIPKNN-PP---TLEGN 224 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH---------HHHHHhcCC-CC---CCCcc
Confidence 2223455555 57999999999999999999986322110 011111110 00 00112
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..|++.+|++|++
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~ 246 (277)
T cd06641 225 YSKPLKEFVEACLNKEPSFRPT 246 (277)
T ss_pred cCHHHHHHHHHHccCChhhCcC
Confidence 2344668889999999999943
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-23 Score=189.80 Aligned_cols=152 Identities=19% Similarity=0.239 Sum_probs=113.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||+|+.. +++.||||+++... .+....+.+.+|+.++. +|+|++++.++ +..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES-EEEGVPSTAIREISLLKELQHPNIVCLQDV----LMQESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc-ccCCchHHHHHHHHHHHhcCCCCEeeeEEE----EeeCCeEE
Confidence 4677889999999999999984 58899999986532 22233467888998886 78888887777 66777888
Q ss_pred hhhhhcccchhhhhhhc------------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 250 FMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
+++||+ + +++..++. ++|.|+++++++.+||+|||+++....
T Consensus 76 ~v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 153 (285)
T cd07861 76 LIFEFL-S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI 153 (285)
T ss_pred EEEecC-C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence 999988 4 34443331 677888888999999999999976533
Q ss_pred CCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.........++..| .++|||||||+++||+||+.||..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 154 PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 22111122233333 579999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=186.18 Aligned_cols=199 Identities=17% Similarity=0.221 Sum_probs=137.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCC--CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENE--EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~--~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
++|...+.||+|++|.||+|.. .+++.||+|.+...... .....+.+.+|++++. +|+|++++.++ +..+.
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~ 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGC----LRDDE 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEE----EccCC
Confidence 5788899999999999999987 45889999998643221 1123457888999886 67777777666 66677
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++++||+ +++++.+++. ++|.|+++++++.+||+|||+++....
T Consensus 78 ~~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 78 TLSIFMEYM-PGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred eEEEEEEEC-CCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 889999999 8888776542 678888899999999999999976532
Q ss_pred CCCee---eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 294 DSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 294 ~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... ....|+..| .++|||||||++|||++|+.||....... .............
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---------~~~~~~~~~~~~~ 227 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA---------AIFKIATQPTNPQ 227 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH---------HHHHHhccCCCCC
Confidence 21111 123445555 68999999999999999999986422111 0111111111110
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..||+.+|++|++
T Consensus 228 ---~~~~~~~~~~~li~~~l~~~p~~Rpt 253 (263)
T cd06625 228 ---LPSHVSPDARNFLRRTFVENAKKRPS 253 (263)
T ss_pred ---CCccCCHHHHHHHHHHhhcCcccCCC
Confidence 01122334667888999999999954
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=186.90 Aligned_cols=196 Identities=23% Similarity=0.363 Sum_probs=138.0
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c---cCCcceeeeEeEeeecCCc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P---KYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~---~~n~~~l~~~~~~~~~~~~ 246 (408)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ......++.+|++++. + |+|+++++++ +..+.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~----~~~~~ 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGS----YLKGP 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeee----eeeCC
Confidence 466778899999999999997 568899999986432 2233567888888876 3 7777777776 66777
Q ss_pred cchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
..++++||+ ++++|..++. ++|.|+++++++.++|+|||++......
T Consensus 76 ~~~lv~e~~-~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 76 RLWIIMEYA-EGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EEEEEEecC-CCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 889999999 8888876652 5677788888999999999999876543
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
........|+..| .++|||||||++|||++|+.|+......... ........+.+...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~------~~~~~~~~~~~~~~--- 225 (277)
T cd06917 155 SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM------MLIPKSKPPRLEDN--- 225 (277)
T ss_pred ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh------hccccCCCCCCCcc---
Confidence 3222233455544 5899999999999999999998643221110 00001111122110
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|++|++
T Consensus 226 ---~~~~~~~~~i~~~l~~~p~~R~~ 248 (277)
T cd06917 226 ---GYSKLLREFVAACLDEEPKERLS 248 (277)
T ss_pred ---cCCHHHHHHHHHHcCCCcccCcC
Confidence 12345678889999999999954
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=195.03 Aligned_cols=144 Identities=17% Similarity=0.165 Sum_probs=110.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|.. .+++.||+|.... ..+.+|++++. +|+|++++.++ +..+...
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~----~~~~~~~ 158 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGT----FTYNKFT 158 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEE----EEECCee
Confidence 5799999999999999999997 4588999997542 35678999987 88888888777 4445556
Q ss_pred hhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCCC-
Q 037624 249 WFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD- 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~- 294 (408)
++++|++ . +++..++ ++||.|++++.++.+||+|||+|+.....
T Consensus 159 ~lv~e~~-~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 159 CLILPRY-K-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEEecC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 6666665 2 3443332 27899999999999999999999754321
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
........||+.| .++|||||||++|||+||+.|+.
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 1222345688777 68999999999999999998864
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-23 Score=189.84 Aligned_cols=206 Identities=15% Similarity=0.183 Sum_probs=135.9
Q ss_pred ccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC--C
Q 037624 175 DIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK--D 245 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~--~ 245 (408)
...+.||+|+||+||++.. .+++.||+|.+.... .......|.+|++++. +|+|++++.++ +.. .
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~ 80 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGC----CSEQGG 80 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEE----EecCCC
Confidence 6678899999999988753 357789999986532 2234567889999886 77777777665 332 3
Q ss_pred ccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
...++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++....
T Consensus 81 ~~~~lv~e~~-~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 81 KGLQLIMEYV-PLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ceEEEEecCC-CCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 4578899999 8888877652 788999999999999999999987643
Q ss_pred CCCee---eecccCCCC------------cccchhhhhHHHHHHHhCCCCCccccc-ccC---C-ccccccchhhhccCC
Q 037624 294 DSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSS-LSS---S-SSSDQNIMLLDVLDP 353 (408)
Q Consensus 294 ~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~-~~~---~-~~~~~~~~~~~~~d~ 353 (408)
..... ....++..| .++|||||||+++||+||+.|+..... ... . ........+.+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence 22110 011122222 689999999999999999999753221 000 0 001111112222222
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcc
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPF 390 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~ 390 (408)
....+. .......+.+++..||+.+|++| |.+++
T Consensus 240 ~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~i~ 275 (283)
T cd05080 240 GMRLPC---PKNCPQEVYILMKNCWETEAKFRPTFRSLI 275 (283)
T ss_pred CCCCCC---CCCCCHHHHHHHHHHhccChhhCCCHHHHH
Confidence 222111 11234567889999999999999 44443
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-23 Score=189.00 Aligned_cols=197 Identities=20% Similarity=0.216 Sum_probs=136.8
Q ss_pred HhhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
.++|...+.||+|+||.||+|...+ +..||+|.+.... .......|.+|+.++. .|+|+++++++ +
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~ 78 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGV----V 78 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEE----E
Confidence 3578888999999999999998742 3679999986432 2233567889999886 77777777776 6
Q ss_pred cCCccchhhhhhcccchhhhhhhc-------------------------------------------cCccccccccCCc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI-------------------------------------------MKPLSWIGLRELE 279 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------~k~~~~~l~~~~~ 279 (408)
......++++||+ ++++|..++. ++|.|+++++++.
T Consensus 79 ~~~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~ 157 (277)
T cd05032 79 STGQPTLVVMELM-AKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT 157 (277)
T ss_pred cCCCCcEEEEecC-CCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC
Confidence 6777888999998 7777765431 6778888899999
Q ss_pred eEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcccccc
Q 037624 280 AFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQN 344 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 344 (408)
+||+|||+++........ .....+|..| .++|||||||+++|++| |+.||..... .
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---------~ 228 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---------E 228 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---------H
Confidence 999999999865432211 1122344444 68999999999999999 8989853211 1
Q ss_pred chhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 345 IMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 345 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+..... .+......+.+++..||+.+|++|++
T Consensus 229 ~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt 267 (277)
T cd05032 229 EVLKFVIDGGHLD----LPENCPDKLLELMRMCWQYNPKMRPT 267 (277)
T ss_pred HHHHHHhcCCCCC----CCCCCCHHHHHHHHHHcCCChhhCCC
Confidence 1111111211111 01122456778999999999999943
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=188.27 Aligned_cols=198 Identities=14% Similarity=0.224 Sum_probs=135.8
Q ss_pred HhhcccceeecccceeEEEEEEeCC-----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.++|...+.||+|+||.||+|...+ +..||+|++... ......+.+.+|+.++. .|+|+++++++ +.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~----~~ 78 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHV----CI 78 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE----Ee
Confidence 4678888999999999999999865 678999998642 23334567889998886 78888887776 44
Q ss_pred C-Cccchhhhhhcccchhhhhhhc-----------------------------------------cCccccccccCCceE
Q 037624 244 K-DACFWFMNTWRGEACSVFCTMI-----------------------------------------MKPLSWIGLRELEAF 281 (408)
Q Consensus 244 ~-~~~~~lv~e~~~~~g~l~~~l~-----------------------------------------~k~~~~~l~~~~~~k 281 (408)
. +...+++++|. +++++..++. ++|.|+++++++.+|
T Consensus 79 ~~~~~~~~~~~~~-~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 79 EDGEPPFVLYPYM-NWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred cCCCCCEEEEEcC-CCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEE
Confidence 4 45677888887 6777765541 567777788889999
Q ss_pred EeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccch
Q 037624 282 VADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIM 346 (408)
Q Consensus 282 i~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~ 346 (408)
|+|||+++.+....... ....++..| .++|||||||++||++| |+.||.......
T Consensus 158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---------- 227 (280)
T cd05043 158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---------- 227 (280)
T ss_pred ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH----------
Confidence 99999998664332111 112233333 68999999999999999 999986432111
Q ss_pred hhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 347 LLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 347 ~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
+...+....... ....+...+.+++..||+.+|++|++.
T Consensus 228 ~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~ 266 (280)
T cd05043 228 MAAYLKDGYRLA---QPINCPDELFAVMACCWALDPEERPSF 266 (280)
T ss_pred HHHHHHcCCCCC---CCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence 111111111100 011223456789999999999999553
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=187.89 Aligned_cols=209 Identities=19% Similarity=0.259 Sum_probs=140.0
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeE
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSF 237 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~ 237 (408)
.++.++..+.+.|+..+.||+|+||.||+|.. .+++.+|+|.+.... ....++..|+.++. .|+|++++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 46667777889999999999999999999998 458899999985421 23456778888775 46666666555
Q ss_pred eEeee--cCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCce
Q 037624 238 MDFVC--IKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEA 280 (408)
Q Consensus 238 ~~~~~--~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ 280 (408)
.-... ......++++||+ ++|++..++. +++.|+++++++.+
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFC-GAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred hhcccccCCCCEEEEEEEeC-CCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCE
Confidence 11000 1245678999999 7777766552 56777778889999
Q ss_pred EEeecccccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccc
Q 037624 281 FVADFGMTMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 281 ki~DfGla~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 343 (408)
+|+|||+++.............|+..| .++|||||||++|||+||+.|+.........
T Consensus 161 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----- 235 (282)
T cd06636 161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----- 235 (282)
T ss_pred EEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-----
Confidence 999999987653222112223344444 4799999999999999999998643211100
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+.. ......+.+++..||+.+|.+|++
T Consensus 236 -~~~~~~~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp~ 272 (282)
T cd06636 236 -FLIPRNPPPKLKS------KKWSKKFIDFIEGCLVKNYLSRPS 272 (282)
T ss_pred -hhHhhCCCCCCcc------cccCHHHHHHHHHHhCCChhhCcC
Confidence 0001111111111 122345778889999999999955
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=187.33 Aligned_cols=154 Identities=19% Similarity=0.284 Sum_probs=116.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|++++. +|+|+++++++ +......
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-DDPVIKKIALREIRMLKQLKHPNLVNLIEV----FRRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecc-cCccccHHHHHHHHHHHhCCCCCEeeeeeE----EeeCCEE
Confidence 35778899999999999999985 58899999986532 22233466889999886 78887777776 6667778
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ +++.+..... ++|.|++++.++++||+|||++.......
T Consensus 76 ~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 76 HLVFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred EEEEecc-CccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 8999999 7766655431 67888889999999999999998764432
Q ss_pred CeeeecccCCC------------C-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYG------------Y-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~------------y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.......++.. | .++|||||||+++||+||+.||..
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~ 203 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPG 203 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 11111222322 2 689999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-23 Score=191.89 Aligned_cols=203 Identities=19% Similarity=0.235 Sum_probs=133.3
Q ss_pred hhcccceeecccceeEEEEEEeCC---------------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCccee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS---------------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETL 234 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~---------------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l 234 (408)
++|...+.||+|+||.||+++..+ ...||+|.++... .......|.+|++++. +|+|++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 467788999999999999997642 2258999987531 2234567999999987 88888888
Q ss_pred eeEeEeeecCCccchhhhhhcccchhhhhhh---------------------------------------------ccCc
Q 037624 235 LSFMDFVCIKDACFWFMNTWRGEACSVFCTM---------------------------------------------IMKP 269 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l---------------------------------------------~~k~ 269 (408)
+++ +......++++||+ ++++|.+++ +++|
T Consensus 83 ~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 83 LGV----CVSDDPLCMITEYM-ENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred EEE----EcCCCccEEEEecC-CCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 887 77778889999999 777765432 1678
Q ss_pred cccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh--CCCCCcccc
Q 037624 270 LSWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM--GRQPGELLS 333 (408)
Q Consensus 270 ~~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt--g~~p~~~~~ 333 (408)
.|+++++++.+||+|||+++......... ....++..| .++|||||||+++||+| |..||....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 88889999999999999997653322111 112223333 68999999999999998 556765321
Q ss_pred cccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 334 SLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.... .....+..+.................+.+++..||+.+|++||+
T Consensus 238 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs 285 (295)
T cd05097 238 DEQV------IENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT 285 (295)
T ss_pred hHHH------HHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 1000 00000101100000000000112346789999999999999944
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=189.31 Aligned_cols=152 Identities=20% Similarity=0.232 Sum_probs=114.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +++.||+|+++.... ......+.+|++++. +|+|++++.++ +..+...
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 79 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDI----VHTDKSL 79 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEE----EeeCCeE
Confidence 46788899999999999999974 578899999875332 223456778999886 78888888777 6677788
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++ ++..++ +++|.|++++.++.+||+|||+++.....
T Consensus 80 ~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 80 TLVFEYL-DK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred EEEEeCC-CC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 8999998 43 444333 16888999999999999999999765432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........||..| .++|||||||+++||+||+.||..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 207 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPG 207 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2222223344444 689999999999999999999854
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=189.48 Aligned_cols=150 Identities=23% Similarity=0.255 Sum_probs=118.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||++... ++..+|+|.+.... .......+.+|++++. +|+|++++.++ +..++..
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGA----FYSDGEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EeeCCEE
Confidence 36888899999999999999974 57889999886421 2234567889999987 78888888887 7778889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|..++. ++|.|+++++++.+||+|||+++.....
T Consensus 75 ~lv~ey~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 75 SICMEHM-DGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred EEEeecc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999 8888877652 5677788888999999999998765322
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
. .....|+..| .++|||||||+++||+||+.|+.
T Consensus 154 ~--~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 154 M--ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred c--cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 1 1223455555 67999999999999999999985
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=190.37 Aligned_cols=195 Identities=19% Similarity=0.275 Sum_probs=131.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCc--EEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSK--VIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|... ++. .+|+|+++.. ......+.|.+|++++. +|+|++++.++ +..+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~----~~~~ 80 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGA----CEHR 80 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEE----ECCC
Confidence 57888899999999999999974 454 4688887642 22234567889998875 68888888777 7777
Q ss_pred ccchhhhhhcccchhhhhhh-------------------------------------------------ccCcccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLSWIGLR 276 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l~~ 276 (408)
...++++||+ ++++|.+++ +++|.|+++++
T Consensus 81 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 81 GYLYLAIEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCceEEEEeC-CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 8889999998 777765543 16788888999
Q ss_pred CCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccc
Q 037624 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 277 ~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 343 (408)
++.+||+|||+++....... .....++..| .++|||||||+++||+| |..||......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------- 230 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------- 230 (303)
T ss_pred CCcEEeCccccCcccchhhh-cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------
Confidence 99999999999864321100 0001112222 78999999999999998 99998532111
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ..+.+......+ ........+.+++..||+.+|++|++
T Consensus 231 -~-~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~ 269 (303)
T cd05088 231 -E-LYEKLPQGYRLE---KPLNCDDEVYDLMRQCWREKPYERPS 269 (303)
T ss_pred -H-HHHHHhcCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 0 011111111110 00112335678899999999999944
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-23 Score=186.67 Aligned_cols=193 Identities=18% Similarity=0.296 Sum_probs=134.4
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||.||+|...++..||+|.+..... ..++|.+|+.++. +|++++++.++ +. ....+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~----~~-~~~~~ 76 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAV----VS-EEPIY 76 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeE----EC-CCCcE
Confidence 46777889999999999999988888899999875322 2467999999986 67777776655 43 34567
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. ++|.|+++++++.+||+|||+++.....
T Consensus 77 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 77 IVTEYM-SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEec-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 999998 7777766541 6788888889999999999999865432
Q ss_pred CCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... ....++..| .++|||||||+++||+| |+.||...... . ..+.+......+.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---------~-~~~~~~~~~~~~~- 224 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---------E-VLEQVERGYRMPC- 224 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---------H-HHHHHHcCCCCCC-
Confidence 2111 111233334 58999999999999999 88898642111 1 1111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+|++.+|++|++
T Consensus 225 --~~~~~~~~~~li~~~l~~~p~~Rpt 249 (260)
T cd05070 225 --PQDCPISLHELMLQCWKKDPEERPT 249 (260)
T ss_pred --CCcCCHHHHHHHHHHcccCcccCcC
Confidence 1123345778999999999999954
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-23 Score=191.27 Aligned_cols=199 Identities=16% Similarity=0.219 Sum_probs=136.9
Q ss_pred HHHhhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
...++|+..+.||+|+||.||+|...+ ...+|+|.+.... .......+.+|++++. +|+|+++++++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~-- 84 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGV-- 84 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE--
Confidence 344678888999999999999998732 3579999987532 2233456889998875 57777777776
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+..+...++++||+ ++|+|..++ +++|.
T Consensus 85 --~~~~~~~~li~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~ 161 (293)
T cd05053 85 --CTQEGPLYVVVEYA-AHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAAR 161 (293)
T ss_pred --EcCCCCeEEEEEeC-CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccccee
Confidence 77777889999998 777776554 16788
Q ss_pred ccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|+++++++.+|++|||+++......... ....++..| .++|||||||++|||++ |..|+......
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 8888999999999999998764322111 111223334 68999999999999998 98887532110
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+.+...... .....+...+.+++..||+.+|++|++
T Consensus 242 ----------~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps 280 (293)
T cd05053 242 ----------ELFKLLKEGYRM---EKPQNCTQELYHLMRDCWHEVPSQRPT 280 (293)
T ss_pred ----------HHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcC
Confidence 011111111111 011123445778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.4e-23 Score=185.99 Aligned_cols=194 Identities=19% Similarity=0.273 Sum_probs=133.8
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.+|+..+.||+|+||.||+|...++..+|+|.+.... ....+|.+|++++. .|+|+++++++ +......+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 75 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA----MSEEDFIEEAQVMMKLSHPKLVQLYGV----CTERSPIC 75 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC----CCHHHHHHHHHHHHhCCCCCeeeEEEE----EccCCceE
Confidence 4677889999999999999998778889999986432 12457899999886 77777777766 66667788
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++++|.+++. ++|.|++++.++.+||+|||+++......
T Consensus 76 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 76 LVFEFM-EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EEEEcC-CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999998 7777766552 57778888888999999999987653221
Q ss_pred Ce-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 296 SN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 296 ~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.. .....++.+| .++|||||||++|||++ |+.|+........ ...+.+...+ ..+ .
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~-~~~---~ 224 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV------VETINAGFRL-YKP---R 224 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH------HHHHhCCCCC-CCC---C
Confidence 11 0111223333 57999999999999998 9999863211000 0001100010 001 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|++|++
T Consensus 225 ---~~~~~~~~l~~~~l~~~p~~Rp~ 247 (256)
T cd05112 225 ---LASQSVYELMQHCWKERPEDRPS 247 (256)
T ss_pred ---CCCHHHHHHHHHHcccChhhCCC
Confidence 11245778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.8e-23 Score=190.51 Aligned_cols=200 Identities=20% Similarity=0.272 Sum_probs=132.3
Q ss_pred hhcccceeecccceeEEEEEEeC-----------------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-----------------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIE 232 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-----------------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~ 232 (408)
++|+..+.||+|+||.||++... ++..||+|++... ........|.+|++++. +|+|++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED--ANKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 46888899999999999998532 2346899998742 22334568999999886 788877
Q ss_pred eeeeEeEeeecCCccchhhhhhcccchhhhhhh--------------------------------------------ccC
Q 037624 233 TLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM--------------------------------------------IMK 268 (408)
Q Consensus 233 ~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l--------------------------------------------~~k 268 (408)
+++++ +..+...++++||+ ++++|..++ ++|
T Consensus 83 ~~~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 83 RLLAV----CITSDPLCMITEYM-ENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred eEEEE----EecCCccEEEEEeC-CCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 77776 66677788999998 777775543 168
Q ss_pred ccccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh--CCCCCccc
Q 037624 269 PLSWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM--GRQPGELL 332 (408)
Q Consensus 269 ~~~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt--g~~p~~~~ 332 (408)
|.|+++++++.+||+|||+++.+....... ....++..| .++|||||||++|||+| |..|+...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 888889899999999999998653322110 111112222 68999999999999998 66777532
Q ss_pred ccccCCccccccchhhhccCC---CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 333 SSLSSSSSSDQNIMLLDVLDP---RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~d~---~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...... . ...+.... .... .....+...+.+++..||+.+|++|++
T Consensus 238 ~~~~~~-~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~ 286 (296)
T cd05095 238 SDEQVI-E-----NTGEFFRDQGRQVYL---PKPALCPDSLYKLMLSCWRRNAKERPS 286 (296)
T ss_pred ChHHHH-H-----HHHHHHhhccccccC---CCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 111100 0 00000000 0000 001123356778999999999999943
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-23 Score=188.78 Aligned_cols=198 Identities=18% Similarity=0.195 Sum_probs=133.7
Q ss_pred HHhhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
++++|...+.||+|+||.||+|...+ +..||+|.+... ........|.+|+.++. +|+|+++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~---- 77 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGV---- 77 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----
Confidence 45788999999999999999999853 567899988642 22233467999998886 77777777776
Q ss_pred ecCCccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccC---C
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRE---L 278 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~---~ 278 (408)
+......++++||+ ++++|.+++. ++|.|++++.+ .
T Consensus 78 ~~~~~~~~lv~e~~-~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 78 SFERLPRFILLELM-AGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred EccCCCcEEEEecC-CCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCc
Confidence 66677788999999 8888876541 56777777644 3
Q ss_pred ceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccc
Q 037624 279 EAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 343 (408)
.+|++|||+++......... ....++..| .++|||||||+++||+| |+.||+....
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------- 227 (277)
T cd05036 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------- 227 (277)
T ss_pred ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---------
Confidence 69999999998763221110 001111222 68999999999999997 9999863211
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+.+....... .+......+.+++..|++.+|++|++
T Consensus 228 -~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~p~~Rps 267 (277)
T cd05036 228 -QEVMEFVTGGGRLD---PPKGCPGPVYRIMTDCWQHTPEDRPN 267 (277)
T ss_pred -HHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 01111111111110 01122346778899999999999944
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=185.88 Aligned_cols=147 Identities=16% Similarity=0.261 Sum_probs=109.7
Q ss_pred eeecccceeEEEEEEeCC---CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhh
Q 037624 178 YCFGTGGYGSVYIAQLTS---SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~---g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
+.||+|+||.||+|...+ +..+|+|+++... .......|.+|+.++. +|+|+++++++ +......++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~lv~ 74 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQ----CTEVTPYLLVM 74 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEE----EcCCCCcEEEE
Confidence 358999999999998743 3578999986532 2223457888999886 78888888887 77777888999
Q ss_pred hhcccchhhhhhhc--------------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 253 TWRGEACSVFCTMI--------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 253 e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
||+ ++|+|.+++. +||.|++++.++++|++|||+++.....
T Consensus 75 e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 75 EFC-PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred ECC-CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 999 8888876541 5777888888999999999999754322
Q ss_pred CCee--eecccCCCC-------------------cccchhhhhHHHHHHHh-CCCCCcc
Q 037624 295 SSNL--TLLAGTYGY-------------------EKCDVYSFGVVALEILM-GRQPGEL 331 (408)
Q Consensus 295 ~~~~--~~~~gt~~y-------------------~k~DVySfGvvl~Ellt-g~~p~~~ 331 (408)
.... ....|+..| .++|||||||+++||++ |+.||..
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 212 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRH 212 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 2111 112233333 47999999999999997 9999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=183.45 Aligned_cols=201 Identities=18% Similarity=0.282 Sum_probs=139.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|... ++..+|+|++...... ...+.+.+|++++. +|+|++++.+. +......
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTS----FVVGDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEE----EeeCCEE
Confidence 46888899999999999999974 5788999998643221 24677899999886 78888887776 6667788
Q ss_pred hhhhhhcccchhhhhhhc------------------------------------cCccccccccCCceEEeecccccccC
Q 037624 249 WFMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
++++|++ +++++.+++. ++|.|+++++++.+||+|||++..+.
T Consensus 75 ~iv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 75 WLVMPYL-SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred EEEEecc-CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 8999999 7777666542 56677778889999999999997765
Q ss_pred CCCCe----eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 293 CDSSN----LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 293 ~~~~~----~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
..... .....|+..| .++|||||||+++||+||+.|+........... ......+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~------~~~~~~~~~ 227 (267)
T cd06610 154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLML------TLQNDPPSL 227 (267)
T ss_pred cCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHH------HhcCCCCCc
Confidence 43222 1223456555 579999999999999999999864322111000 000011111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
... .........+.+++..|++.+|++|++
T Consensus 228 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~ 257 (267)
T cd06610 228 ETG--ADYKKYSKSFRKMISLCLQKDPSKRPT 257 (267)
T ss_pred CCc--cccccccHHHHHHHHHHcCCChhhCcC
Confidence 110 000122345678889999999999954
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-23 Score=189.34 Aligned_cols=195 Identities=21% Similarity=0.315 Sum_probs=133.2
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.++...+.||+|+||.||++... ++..+|+|.+... .......|.+|++++. +|+|+++++++ +.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~ 77 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGV----CT 77 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEE----Ee
Confidence 35667789999999999999742 3567999988642 2334568999999887 88888888777 66
Q ss_pred CCccchhhhhhcccchhhhhhh------------------------------------------------ccCccccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM------------------------------------------------IMKPLSWIGL 275 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------~~k~~~~~l~ 275 (408)
.....++++||+ ++++|.+++ +++|.|++++
T Consensus 78 ~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 78 EGRPLLMVFEYM-RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG 156 (280)
T ss_pred cCCceEEEEecC-CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence 677788999998 777665432 1678888888
Q ss_pred cCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS 340 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 340 (408)
+++.+||+|||+++........ .....++..| .++|||||||+++||+| |+.||.....
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 230 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN------ 230 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH------
Confidence 9999999999999765322111 0111223334 68999999999999999 8999753211
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+....... ........+.+++..||+.+|++|++
T Consensus 231 ---~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~~P~~Rp~ 270 (280)
T cd05092 231 ---TEAIECITQGRELE----RPRTCPPEVYAIMQGCWQREPQQRMV 270 (280)
T ss_pred ---HHHHHHHHcCccCC----CCCCCCHHHHHHHHHHccCChhhCCC
Confidence 11111111111100 00122345678889999999999954
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=189.48 Aligned_cols=196 Identities=21% Similarity=0.266 Sum_probs=132.0
Q ss_pred hhcccceeecccceeEEEEEEeCC-Cc--EEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SK--VIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|...+ +. .+|+|.++.. ......+.|.+|++++. +|+|++++.++ +...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~----~~~~ 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGA----CENR 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEE----EccC
Confidence 467888999999999999999854 33 4788888642 12234567899998886 57888888777 6777
Q ss_pred ccchhhhhhcccchhhhhhh-------------------------------------------------ccCcccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLSWIGLR 276 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l~~ 276 (408)
...++++||+ ++++|.+++ ++||.|+++++
T Consensus 76 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~ 154 (297)
T cd05089 76 GYLYIAIEYA-PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE 154 (297)
T ss_pred CcceEEEEec-CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC
Confidence 7788999998 777775443 16788888999
Q ss_pred CCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccc
Q 037624 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 277 ~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 343 (408)
++.+||+|||++......... .....+..| .++|||||||+++||+| |+.||......
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-------- 225 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKK-TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-------- 225 (297)
T ss_pred CCeEEECCcCCCccccceecc-CCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------
Confidence 999999999998643211000 000111122 68999999999999998 99998532110
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. +.+.+......+. .......+.+++..||+.+|.+|++.
T Consensus 226 -~-~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~ 265 (297)
T cd05089 226 -E-LYEKLPQGYRMEK---PRNCDDEVYELMRQCWRDRPYERPPF 265 (297)
T ss_pred -H-HHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 0 1111111111100 01123456788999999999999443
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=182.15 Aligned_cols=204 Identities=20% Similarity=0.260 Sum_probs=135.3
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC-Cccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-DACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-~~~~ 248 (408)
.|...+++|+|+||.||+|.+. +++.||||+..... +--.+|+++|. .|+|++++.-++..-... .-..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 4566799999999999999984 47899999986532 11235777776 999999998886543333 2255
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccc-cCCceEEeecccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGL-RELEAFVADFGMTMH 290 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~-~~~~~ki~DfGla~~ 290 (408)
-+|+||| +. +|.+.++ +||.|+++| +.+..||||||-|+.
T Consensus 98 nlVleym-P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 98 NLVLEYM-PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHhc-hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 6899998 43 4443331 899999999 559999999999999
Q ss_pred cCCCCCeee-----------ecccCCCC-cccchhhhhHHHHHHHhCCCCCcccccccCC------ccccccch------
Q 037624 291 LYCDSSNLT-----------LLAGTYGY-EKCDVYSFGVVALEILMGRQPGELLSSLSSS------SSSDQNIM------ 346 (408)
Q Consensus 291 ~~~~~~~~~-----------~~~gt~~y-~k~DVySfGvvl~Elltg~~p~~~~~~~~~~------~~~~~~~~------ 346 (408)
+..+....+ ...|...| .+.||||.|||+.||+-|+.-|...+..+.. ...-....
T Consensus 176 L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 176 LVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred eccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 876554322 13455555 8999999999999999999877543322111 00000000
Q ss_pred -hhhccCCCCCCcc-ch-hHHHHHHHHHHHHHhhccCCCCCc
Q 037624 347 -LLDVLDPRLSPPV-DR-MVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 347 -~~~~~d~~l~~~~-~~-~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
-.+.-.|.+.... .. .......+.+++..++++.+|.+|
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R 297 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKR 297 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhc
Confidence 0122223332211 00 122334567788899999999999
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=185.34 Aligned_cols=193 Identities=17% Similarity=0.258 Sum_probs=133.8
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|.....||+|+||.||+|...++..||+|.+.... ...+.|.+|++++. +|+|++++.++ +. ....+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~-~~~~~ 76 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAV----VS-EEPIY 76 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEE----Ec-CCCcE
Confidence 4577788999999999999998777789999986422 23467899999986 78888877665 43 34567
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. +++.|+++++++.+||+|||+++.....
T Consensus 77 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 77 IVTEFM-GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEcC-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 899998 7888776652 6778888889999999999999865432
Q ss_pred CCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... ....++..| .++|||||||+++||+| |+.|+...... .....+.. ....+.
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---------~~~~~~~~-~~~~~~- 224 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---------EVLEQVER-GYRMPC- 224 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---------HHHHHHHc-CCCCCC-
Confidence 2111 112233444 58999999999999999 89998642111 00111111 111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+||+.+|++|++
T Consensus 225 --~~~~~~~~~~li~~~l~~~p~~Rp~ 249 (260)
T cd05069 225 --PQGCPESLHELMKLCWKKDPDERPT 249 (260)
T ss_pred --CcccCHHHHHHHHHHccCCcccCcC
Confidence 1122345678888999999999943
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=189.00 Aligned_cols=197 Identities=18% Similarity=0.241 Sum_probs=136.1
Q ss_pred HhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
.++|+..+.||+|+||.||+|... ++..||+|.+.... .....+.|.+|++++. .|+|++++.++ +
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~----~ 77 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGV----C 77 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEE----E
Confidence 467888999999999999999863 46789999987432 2234567999999986 78888887777 7
Q ss_pred cCCccchhhhhhcccchhhhhhhc-------------------------------------------------------c
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI-------------------------------------------------------M 267 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------------------~ 267 (408)
..+...++++||+ ++++|.+++. +
T Consensus 78 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl 156 (288)
T cd05050 78 AVGKPMCLLFEYM-AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDL 156 (288)
T ss_pred cCCCccEEEEecC-CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 7777888999998 7777655431 5
Q ss_pred CccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCccc
Q 037624 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELL 332 (408)
Q Consensus 268 k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~ 332 (408)
+|.|+++++++.+||+|||+++........ .....++..| .++|||||||+++||++ |..|+...
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 677777889999999999998765322110 0111122233 68999999999999998 88887532
Q ss_pred ccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 333 SSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. ......+.+...... .......+.+++.+|++.+|++|++
T Consensus 237 ~~---------~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt 278 (288)
T cd05050 237 AH---------EEVIYYVRDGNVLSC----PDNCPLELYNLMRLCWSKLPSDRPS 278 (288)
T ss_pred CH---------HHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHcccCcccCCC
Confidence 11 111122222222110 0122345778999999999999954
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=182.90 Aligned_cols=197 Identities=17% Similarity=0.212 Sum_probs=136.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||++... +++.||+|++.... ......+.+.+|++++. +|+|++++.+. +...+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~---~~~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN-ASRRERKAAEQEAQLLSQLKHPNIVAYRES---WEGEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh-cCHHHHHHHHHHHHHHHhCCCCCeeeeeee---ecCCCCEEE
Confidence 4777899999999999999974 47889999986532 22234567888988886 67777766554 233445678
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ +++++.+++. ++|.|++++.++.++|+|||+++.....
T Consensus 77 lv~e~~-~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 77 IVMGFC-EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred EEeccc-CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999998 7787766541 6788888889999999999999876433
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++|||||||+++||+||+.||+..... .....+....+...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~---------~~~~~~~~~~~~~~---- 222 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN---------SLVYRIIEGKLPPM---- 222 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---------HHHHHHHhcCCCCC----
Confidence 2222334566655 6899999999999999999998632110 00111111111110
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.+|++|++
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~ 247 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPS 247 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCC
Confidence 0122345778899999999999943
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=185.60 Aligned_cols=187 Identities=14% Similarity=0.211 Sum_probs=128.2
Q ss_pred ecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 180 FGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
||+|+||.||+|.+. ++..||+|.+.... .....+.|.+|+.++. +|+|+++++++ +. ....++++||
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~----~~-~~~~~lv~e~ 75 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGV----CE-AEALMLVMEM 75 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEE----Ec-CCCeEEEEEe
Confidence 899999999999873 35579999987532 2334567999999986 78888877776 54 3456789999
Q ss_pred cccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCee--
Q 037624 255 RGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL-- 298 (408)
Q Consensus 255 ~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~-- 298 (408)
+ ++++|.+++. ++|.|++++.+..+||+|||+++.........
T Consensus 76 ~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 76 A-SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred C-CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9 8888887662 67888889999999999999998654332211
Q ss_pred -eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 299 -TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 299 -~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
+...++..| .++|||||||+++|+++ |+.||...... .....+......+. +.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----------~~~~~~~~~~~~~~---~~ 221 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP----------EVMSFIEQGKRLDC---PA 221 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH----------HHHHHHHCCCCCCC---CC
Confidence 111122333 58999999999999997 99998643211 11111111111110 11
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+...+.+++..||+.+|++|++
T Consensus 222 ~~~~~l~~li~~c~~~~~~~Rp~ 244 (257)
T cd05115 222 ECPPEMYALMKDCWIYKWEDRPN 244 (257)
T ss_pred CCCHHHHHHHHHHcCCChhhCcC
Confidence 22345668889999999999943
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=185.41 Aligned_cols=190 Identities=17% Similarity=0.256 Sum_probs=135.3
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++. +|+|+++++++ +......+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 76 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGV----VLQGNPLY 76 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEE----EcCCCCeE
Confidence 56788899999999999999985 78899999975321 4578999999886 67777777777 66677888
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 77 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 77 IVTEYM-AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEEEec-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 999999 8888776541 6788889999999999999999876322
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.. ...++..| .++||||||++++|+++ |+.|+...... .+.+.+.......
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----------~~~~~~~~~~~~~--- 219 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----------DVVPHVEKGYRME--- 219 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH----------HHHHHHhcCCCCC---
Confidence 11 11122222 58999999999999998 99997532110 0111111111110
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..|++.+|++|++
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~ 245 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPT 245 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcC
Confidence 01122345678889999999999944
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=191.47 Aligned_cols=158 Identities=18% Similarity=0.162 Sum_probs=115.2
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee--cC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC--IK 244 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~--~~ 244 (408)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.++. +|+|++++++++.... ..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 347899999999999999999987 458899999997532 22234567888999886 7888777776632110 11
Q ss_pred Cccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 245 DACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
....++++||+ +++ +...+ ++||.|++++.++.+||+|||+++....
T Consensus 98 ~~~~~lv~e~~-~~~-l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 98 FQDVYLVMELM-DAN-LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred cceeEEEEeCC-CcC-HHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 12457888888 443 22211 2789999999999999999999986532
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. ......||..| .++|||||||++|||+||+.||..
T Consensus 176 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 176 NF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred Cc-cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 21 12334566666 689999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-23 Score=183.89 Aligned_cols=158 Identities=19% Similarity=0.233 Sum_probs=116.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeec----CC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCI----KD 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~----~~ 245 (408)
...|...+.||+|+||.|+++.. .+|+.||||++...- ......+.-.+|+++| +|..|.++++..+.+.. .-
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklL-r~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLL-RHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHH-HHhcCCCcceEEeeccccccccc
Confidence 34455568899999999999998 568999999997422 2333456778999999 55555555555554433 23
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
...++|+|+|. .+|...++ +||.|++++.+...||+|||+||...
T Consensus 99 ~DvYiV~elMe--tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 99 NDVYLVFELME--TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred ceeEEehhHHh--hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 45788999982 34443331 78999999999999999999999885
Q ss_pred CC--CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 293 CD--SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 293 ~~--~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.. ...+|..+.|.+| ...||||.|||+.||++|++-|...
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~ 231 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK 231 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence 42 2234666778777 6789999999999999999987543
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=185.31 Aligned_cols=188 Identities=18% Similarity=0.257 Sum_probs=131.3
Q ss_pred eeecccceeEEEEEEeCC--Cc--EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 178 YCFGTGGYGSVYIAQLTS--SK--VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~--g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+.||+|++|.||+|.+.+ ++ .||||.+...... ...+.|.+|++++. +|+|++++.+. +.. ...+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~-~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGV----VLT-HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEE----EcC-CeEEEE
Confidence 368999999999999743 33 6899999764322 45678999999997 78888877766 444 677888
Q ss_pred hhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 252 NTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+||+ ++++|.+++. ++|.|++++.++.+||+|||+++.......
T Consensus 74 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 74 TELA-PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred EEec-CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 9998 7777776541 677888888899999999999987654222
Q ss_pred ee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhcc--CCCCCCc
Q 037624 297 NL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVL--DPRLSPP 358 (408)
Q Consensus 297 ~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~--d~~l~~~ 358 (408)
.. ....++.+| .++|||||||+++||+| |+.|+....... ....+. ......
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---------~~~~~~~~~~~~~~- 222 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---------ILKKIDKEGERLER- 222 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---------HHHHHHhcCCcCCC-
Confidence 11 123345555 57999999999999999 999985321110 011111 011111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.+|++|++
T Consensus 223 ----~~~~~~~~~~li~~~l~~~p~~Rps 247 (257)
T cd05040 223 ----PEACPQDIYNVMLQCWAHNPADRPT 247 (257)
T ss_pred ----CccCCHHHHHHHHHHCCCCcccCCC
Confidence 1122346778999999999999943
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=186.17 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=137.9
Q ss_pred hhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|+.. .+..+|+|.++... .....+.|.+|+.++. +|+|++++.++ +..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~ 77 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGV----VTKS 77 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEE----EecC
Confidence 56888899999999999999873 23379999986532 2234568899999886 78888888777 6677
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. ++|.|++++.++++|++|||+++..
T Consensus 78 ~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 78 KPVMIVTEYM-ENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred CccEEEEEcC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 7889999999 8888876652 6778888889999999999999876
Q ss_pred CCCCCee-ee--cccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL-TL--LAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~-~~--~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... +. ..++..| .++|||||||+++|+++ |+.||...... .....+.+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---------~~~~~~~~~-~ 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---------DVIKAIEEG-Y 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---------HHHHHHhCC-C
Confidence 4332211 11 1112233 68999999999999887 99998532110 001111111 1
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccc
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFH 391 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~ 391 (408)
..+ ........+.+++..|++.+|++| |.+.+.
T Consensus 227 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 227 RLP---APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred cCC---CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 110 011223456788899999999999 544433
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-22 Score=183.51 Aligned_cols=195 Identities=19% Similarity=0.295 Sum_probs=136.8
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
-++|...+.||+|+||.||+|...+++.||||.+.... ...+++.+|+.++. +|+|++++.++ +......
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 76 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT----MSPEAFLQEAQIMKKLRHDKLVQLYAV----CSEEEPI 76 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc----cCHHHHHHHHHHHhhCCCCCEeeeeee----eecCCce
Confidence 45788889999999999999999888889999987432 23467899999886 77777777666 6666778
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||+ ++++|.+++. ++|.|+++++++.+|++|||+++....
T Consensus 77 ~~v~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 77 YIVTEYM-SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EEEEecc-CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 8999998 8888776652 678888899999999999999886542
Q ss_pred CCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 294 DSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 294 ~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.... .....++..| .++|||||||+++|++| |+.||..... ......+. .....+.
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---------~~~~~~~~-~~~~~~~ 225 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---------REVLEQVE-RGYRMPR 225 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHH-cCCCCCC
Confidence 1110 0111122233 68999999999999999 9999853211 11111111 1111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+|++.+|++|++
T Consensus 226 ---~~~~~~~~~~~i~~~l~~~p~~Rp~ 250 (261)
T cd05034 226 ---PPNCPEELYDLMLQCWDKDPEERPT 250 (261)
T ss_pred ---CCCCCHHHHHHHHHHcccCcccCCC
Confidence 0112345778899999999999965
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-23 Score=194.91 Aligned_cols=198 Identities=16% Similarity=0.217 Sum_probs=130.5
Q ss_pred hhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC 242 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~ 242 (408)
++|...+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+.++. +|+|+++++++ +.
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~---~~ 81 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA---CT 81 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcce---ee
Confidence 4688889999999999999973 357789999997432 1223467889999986 46777777665 22
Q ss_pred cCCccchhhhhhcccchhhhhhh---------------------------------------------------------
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM--------------------------------------------------------- 265 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l--------------------------------------------------------- 265 (408)
..+...++++||+ ++|+|.+++
T Consensus 82 ~~~~~~~lv~ey~-~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 82 KPGGPLMVIVEFC-KFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred cCCCceEEEEecc-CCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 3345667888998 777765432
Q ss_pred -------------------------------------------ccCccccccccCCceEEeecccccccCCCCCee--ee
Q 037624 266 -------------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSNL--TL 300 (408)
Q Consensus 266 -------------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~ 300 (408)
++||.|+++++++++||+|||+++......... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 267888889999999999999998653221111 11
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
..++..| .++|||||||+++||++ |..|+...... ......+.......... ...
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~ 308 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---------EEFCRRLKEGTRMRAPD---YTT 308 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc---------HHHHHHHhccCCCCCCC---CCC
Confidence 2233333 68999999999999997 89897532110 00111111111110001 112
Q ss_pred HHHHHHHHhhccCCCCCcCC
Q 037624 368 VLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+++..||+.+|++|++
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps 328 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPT 328 (343)
T ss_pred HHHHHHHHHHccCChhhCcC
Confidence 34678889999999999944
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-23 Score=194.87 Aligned_cols=192 Identities=19% Similarity=0.265 Sum_probs=140.1
Q ss_pred hcccceeecccceeEEEEEEeCC---Cc--EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS---SK--VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~---g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
.....++||.|-||.||+|.+.+ |+ .||||..+.. .+....+.|+.|.-+|. .|||+++++|. |.+.
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--~t~d~tekflqEa~iMrnfdHphIikLIGv----~~e~ 463 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--CTPDDTEKFLQEASIMRNFDHPHIIKLIGV----CVEQ 463 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC--CChhhHHHHHHHHHHHHhCCCcchhheeee----eecc
Confidence 34456789999999999999733 32 5899999863 33445788999999998 99999999998 7654
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..|+|||.. +-|.|..|+. +...|+++...-.+|++|||++|.+
T Consensus 464 -P~WivmEL~-~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 464 -PMWIVMELA-PLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred -ceeEEEecc-cchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 467888988 8999998883 3445666777889999999999998
Q ss_pred CCCCCeeeeccc----------CCCC----cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 292 YCDSSNLTLLAG----------TYGY----EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 292 ~~~~~~~~~~~g----------t~~y----~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
..+.... ...| +..| ++||||-|||.+||+++ |..||......+- +.. +...-+
T Consensus 542 ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV---------I~~-iEnGeR 610 (974)
T KOG4257|consen 542 EDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV---------IGH-IENGER 610 (974)
T ss_pred cccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce---------EEE-ecCCCC
Confidence 6543221 1122 2223 79999999999999998 9999875422111 111 111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
. +.+..|+..+..++..||+.+|.+|+
T Consensus 611 l---P~P~nCPp~LYslmskcWayeP~kRP 637 (974)
T KOG4257|consen 611 L---PCPPNCPPALYSLMSKCWAYEPSKRP 637 (974)
T ss_pred C---CCCCCCChHHHHHHHHHhccCcccCC
Confidence 1 22346778888999999999999993
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-22 Score=188.07 Aligned_cols=205 Identities=19% Similarity=0.222 Sum_probs=136.9
Q ss_pred hcccceeecccceeEEEEEEeC-----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC-
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK- 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~- 244 (408)
+|...+.||+|+||.||+|++. .++.||||.+...... ...+.|.+|++++. .|+|++++.++ +..
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~----~~~~ 78 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGV----CEKP 78 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEee----eecC
Confidence 4666788999999999999863 3678999999753321 34678999998886 78888777766 444
Q ss_pred -Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccc
Q 037624 245 -DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 245 -~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
....++++||+ +++++..++. ++|.|++++.++.+||+|||++.
T Consensus 79 ~~~~~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 79 GGRSLRLIMEYL-PSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred CCCceEEEEecC-CCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 45678899998 8888876662 67788888899999999999998
Q ss_pred ccCCCCCeee---ecccCCCC------------cccchhhhhHHHHHHHhCCCCCccccccc--CCcc---ccccchhhh
Q 037624 290 HLYCDSSNLT---LLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLS--SSSS---SDQNIMLLD 349 (408)
Q Consensus 290 ~~~~~~~~~~---~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~--~~~~---~~~~~~~~~ 349 (408)
.......... ...++..| .++||||||++++||+||+.|+....... .... ......+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 7653221110 11112222 68999999999999999999975321110 0000 000111222
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+......+ ....+...+.+++.+||+.+|++|++
T Consensus 238 ~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt 272 (284)
T cd05038 238 LLKEGERLP---RPPSCPDEVYDLMKLCWEAEPQDRPS 272 (284)
T ss_pred HHHcCCcCC---CCccCCHHHHHHHHHHhccChhhCCC
Confidence 222222211 11123456889999999999999944
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-22 Score=187.43 Aligned_cols=152 Identities=19% Similarity=0.216 Sum_probs=114.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +++.||+|.+..... ......+.+|+.++. +|+|++++.++ +..+...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~----~~~~~~~ 79 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDI----IHTEKSL 79 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEE----EecCCeE
Confidence 46788899999999999999874 578999999865322 223446778998886 78888887777 6667778
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ + +++..++. ++|.|+++++++.+||+|||+++.....
T Consensus 80 ~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 80 TLVFEYL-D-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred EEEEecc-c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 8999998 4 35544331 6888889999999999999999765432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........++..| .++|||||||+++||+||+.||..
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2222222334444 579999999999999999999864
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-22 Score=184.04 Aligned_cols=193 Identities=19% Similarity=0.300 Sum_probs=133.8
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|...++..+|+|.+... ....+.|.+|++++. +|+|++++.++ +.. ...+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~-~~~~ 76 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAV----VTK-EPIY 76 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEE----EcC-CCeE
Confidence 467888999999999999999877888999988642 123467899999886 77777777665 444 5678
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ +++++.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 77 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 77 IITEFM-AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEeC-CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 899999 7888876652 6778888889999999999999765432
Q ss_pred CCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... .....++..| .++|||||||+++|++| |+.||...... .+...+......+.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----------~~~~~~~~~~~~~~- 224 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----------EVIRALERGYRMPR- 224 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH----------HHHHHHhCCCCCCC-
Confidence 211 1112233334 58999999999999999 89998632110 01111111111000
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.+|++||+
T Consensus 225 --~~~~~~~~~~~i~~~l~~~p~~Rp~ 249 (260)
T cd05073 225 --PENCPEELYNIMMRCWKNRPEERPT 249 (260)
T ss_pred --cccCCHHHHHHHHHHcccCcccCcC
Confidence 0122345778889999999999954
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=187.09 Aligned_cols=207 Identities=19% Similarity=0.215 Sum_probs=134.8
Q ss_pred hhcccceeecccceeEEEEEEeC-----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.+|...+.||+|+||.||+|... ++..||+|++... .....+.|.+|++++. +|+|++++.++.- ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~ 78 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCY--SAG 78 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEc--cCC
Confidence 46777889999999999999852 4778999998642 2234568899999987 8888888777611 123
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++++||+ ++++|.+++. ++|.|+++++++++||+|||+++.
T Consensus 79 ~~~~~lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 79 RRNLRLVMEYL-PYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred CCceEEEEEec-CCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 34578999999 8888887762 678888899999999999999987
Q ss_pred cCCCCCee---eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc--cCCccc----cccchhhh
Q 037624 291 LYCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL--SSSSSS----DQNIMLLD 349 (408)
Q Consensus 291 ~~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~--~~~~~~----~~~~~~~~ 349 (408)
........ ....++..| .++|||||||+++||++|..|+...... ...... .....+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 64332211 000111112 6899999999999999988775321110 000000 00001112
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+......+. .......+.+++..||+.+|++|++
T Consensus 238 ~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt 272 (284)
T cd05081 238 LLKNNGRLPA---PPGCPAEIYAIMKECWNNDPSQRPS 272 (284)
T ss_pred HHhcCCcCCC---CCCCCHHHHHHHHHHccCChhhCCC
Confidence 2221111110 1122345778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-23 Score=197.98 Aligned_cols=191 Identities=19% Similarity=0.262 Sum_probs=138.3
Q ss_pred eeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
-+||+|.||+||.|+..+ ...+|||.+..... ...+-...||.+-+ +|.|+|+.+|. +.+++..-+.||-
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs----~senGf~kIFMEq 653 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGS----VSENGFFKIFMEQ 653 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhc----cCCCCeEEEEeec
Confidence 469999999999999855 44689999965332 23455677888765 89999988888 8999988899999
Q ss_pred cccchhhhhhhc------------------------------------cCccccccc-cCCceEEeecccccccCCCCCe
Q 037624 255 RGEACSVFCTMI------------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 255 ~~~~g~l~~~l~------------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+ ++|+|.+.+. +|..|+++. -.|..||+|||.++.+..-...
T Consensus 654 V-PGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 654 V-PGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred C-CCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 9 9999999884 455565555 5689999999999987654444
Q ss_pred eeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 298 LTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 298 ~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
..+..||..| ..+|||||||.+.||.|||+||-........ .... -.--+.|.++
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---MFkV-GmyKvHP~iP------- 801 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---MFKV-GMYKVHPPIP------- 801 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---hhhh-cceecCCCCc-------
Confidence 4556666655 7899999999999999999999654322210 0000 0011223332
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+-..+....+++|..++|.+|.+
T Consensus 802 eelsaeak~FilrcFepd~~~R~s 825 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPS 825 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCcc
Confidence 233445567789999999999943
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-22 Score=195.15 Aligned_cols=152 Identities=20% Similarity=0.262 Sum_probs=108.6
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC--
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-- 244 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-- 244 (408)
..++|...+.||+|+||.||+|... +++.||||++... .....+|+.++. +|+|++++.+++...+..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-------cchHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 3457999999999999999999984 5889999998532 123456888886 888888887764322221
Q ss_pred --Cccchhhhhhcccchhhhhhh-------------------------------------ccCccccccccC-CceEEee
Q 037624 245 --DACFWFMNTWRGEACSVFCTM-------------------------------------IMKPLSWIGLRE-LEAFVAD 284 (408)
Q Consensus 245 --~~~~~lv~e~~~~~g~l~~~l-------------------------------------~~k~~~~~l~~~-~~~ki~D 284 (408)
....++++||+ ++ ++..++ ++||.|++++.+ ..+||+|
T Consensus 137 ~~~~~l~lvmE~~-~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 137 EKNIFLNVVMEFI-PQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCceEEEEEEecC-Cc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeec
Confidence 12355788887 43 332211 278999999855 5799999
Q ss_pred cccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 285 FGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 285 fGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
||+|+.+..... .....||..| .++|||||||+++||+||+.||..
T Consensus 215 FGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 215 FGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred cccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999987643221 1223445444 679999999999999999999864
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-22 Score=189.02 Aligned_cols=192 Identities=18% Similarity=0.290 Sum_probs=151.7
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
=|+.++.||+|-|..|-.|++ -.|..||||++.+.... .........|++.|. +|+|+|+++.+ .......|
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-~~st~hlfqEVRCMKLVQHpNiVRLYEV----iDTQTKly 93 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-TLSTGHLFQEVRCMKLVQHPNIVRLYEV----IDTQTKLY 93 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-hhhhhHHHHHHHHHHHhcCcCeeeeeeh----hcccceEE
Confidence 366678899999999998876 46999999999876543 344556778988887 99999999888 66677788
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccc-cCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~~ 294 (408)
++.|.- ++|+|++|+. +||.|+... .-+-+|+.|||++-.+.+.
T Consensus 94 LiLELG-D~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 94 LILELG-DGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEEEec-CCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 888987 8899999882 688887765 6688999999999776544
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
. ..++.+|+..| .++||||+|||||.|++|+.||... ...+.+.-++|-...-|
T Consensus 173 ~-kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA---------NDSETLTmImDCKYtvP--- 239 (864)
T KOG4717|consen 173 K-KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA---------NDSETLTMIMDCKYTVP--- 239 (864)
T ss_pred c-hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc---------cchhhhhhhhcccccCc---
Confidence 3 45667899888 7899999999999999999999843 34445677888776543
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCc
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..-..++.+|+...+..||.+|
T Consensus 240 --shvS~eCrdLI~sMLvRdPkkR 261 (864)
T KOG4717|consen 240 --SHVSKECRDLIQSMLVRDPKKR 261 (864)
T ss_pred --hhhhHHHHHHHHHHHhcCchhh
Confidence 2233455677788999999999
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-22 Score=191.89 Aligned_cols=159 Identities=17% Similarity=0.150 Sum_probs=116.7
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee--c
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC--I 243 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~--~ 243 (408)
...++|...+.||+|+||.||++... .++.||||++.... ......+.+.+|+.++. +|+|++++++++.... .
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 34578999999999999999999874 58899999997532 22234567788988886 7888888877632110 1
Q ss_pred CCccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 244 KDACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.....++++||+ ++ ++...+ ++||.|++++.++.+||+|||+++...
T Consensus 93 ~~~~~~lv~e~~-~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 93 EFQDVYLVMELM-DA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred ccceeEEEhhhh-cc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 123467889988 44 332221 278999999999999999999998653
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... ......||..| .++|||||||+++||++|+.||..
T Consensus 171 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 171 TSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred Ccc-ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 321 22334567666 689999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=183.71 Aligned_cols=206 Identities=17% Similarity=0.198 Sum_probs=135.8
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|... +|+.||||.+.............+..|..++. .|+|+++++++ +..+...++++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~----~~~~~~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYS----FQSKDYLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeee----EEcCCeEEEEEe
Confidence 46999999999999884 58899999986533222222334555655443 68888888877 777788999999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeee
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL 300 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~ 300 (408)
|+ ++++|..++. ++|.|+++++++.+||+|||+++...... .
T Consensus 78 ~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~ 152 (260)
T cd05611 78 YL-NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK----K 152 (260)
T ss_pred cc-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccc----c
Confidence 99 8888877652 67778888899999999999987643211 1
Q ss_pred cccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 301 ~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
..|+..| .++||||||++++||+||+.|+....... ....+.......+. ........
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~ 222 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA---------VFDNILSRRINWPE-EVKEFCSP 222 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH---------HHHHHHhcccCCCC-cccccCCH
Confidence 2333333 68999999999999999999986432110 01111111111000 01112334
Q ss_pred HHHHHHHhhccCCCCCcCCC-c-ccccchHHHhhhc
Q 037624 369 LVSTILFACLRSNPKTPMQK-P-FHEISISELRNQE 402 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~~-~-~~~~~~~~~~~~~ 402 (408)
.+.+++..|++.+|++|+++ . .+.+..+.+.+.+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 57788899999999999543 2 2334445554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.6e-23 Score=181.75 Aligned_cols=227 Identities=19% Similarity=0.302 Sum_probs=166.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchh
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
++|+..++||+|+|..|..+++ +..+.+|+|+++++-..+.........|-.+...-.|++-++|+..+ ...+...++
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-fqtesrlff 328 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-FQTESRLFF 328 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-hcccceEEE
Confidence 5799999999999999999998 45788999999887666666677788888888766777888887665 445566778
Q ss_pred hhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 251 MNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
|.||+ ++|+|.-++. +|..|++++.++++|+.|||+++.--.+...
T Consensus 329 vieyv-~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~ 407 (593)
T KOG0695|consen 329 VIEYV-NGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT 407 (593)
T ss_pred EEEEe-cCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence 88999 8888876652 5777888999999999999999987666667
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.++.+||+.| ..+|.|++||+++||+.|+.||+.+.. +.......+....-++...++-+. .
T Consensus 408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm-~n~d~ntedylfqvilekqiripr-----s 481 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM-DNPDMNTEDYLFQVILEKQIRIPR-----S 481 (593)
T ss_pred cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecC-CCcccchhHHHHHHHhhhcccccc-----e
Confidence 7889999999 689999999999999999999986642 111112222333445555554331 1
Q ss_pred HHHHHHHHHHhhccCCCCCc----CCCcccccc-hHHHhhhccccc
Q 037624 366 DIVLVSTILFACLRSNPKTP----MQKPFHEIS-ISELRNQEMYFI 406 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~R----m~~~~~~~~-~~~~~~~~~~~~ 406 (408)
-..+...+...-+.+||.+| +..-+..++ .+.++.-+|...
T Consensus 482 lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~l 527 (593)
T KOG0695|consen 482 LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLL 527 (593)
T ss_pred eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHH
Confidence 12334456667899999999 333333333 245555555443
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-22 Score=183.29 Aligned_cols=195 Identities=17% Similarity=0.241 Sum_probs=137.0
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCC--CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENE--EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
|...+.||+|+||.||+|... +++.||+|.+...... .....+.+.+|++++. +|+|++++.++ +..+...
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~ 77 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGT----EREEDNL 77 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeee----EecCCeE
Confidence 556688999999999999986 7889999998653211 1234567899999887 78888888777 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. +++.|++++.++.+||+|||+++......
T Consensus 78 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 78 YIFLELV-PGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEEEec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 9999999 8888876652 56778888899999999999988654322
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC-CCCCCccch
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD-PRLSPPVDR 361 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~ 361 (408)
......|+..| .++|||||||+++||++|+.||........ ...+.. .... .
T Consensus 157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~---------~~~~~~~~~~~----~ 222 (258)
T cd06632 157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA---------VFKIGRSKELP----P 222 (258)
T ss_pred -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH---------HHHHHhcccCC----C
Confidence 11223344443 579999999999999999999864321111 011111 0000 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..||+.+|++|++
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~ 248 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPT 248 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcC
Confidence 00112234567888999999999944
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-22 Score=200.28 Aligned_cols=195 Identities=18% Similarity=0.212 Sum_probs=141.4
Q ss_pred hhcccceeecccceeEEEEEEeCCC-cEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeE-ee--e-cC--
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMD-FV--C-IK-- 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g-~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~-~~--~-~~-- 244 (408)
.....+++|.+|||+.||.|+...+ ..+|+|++.. .+....+...+||++|....+|.++++|++ .. + ..
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 4566779999999999999998665 9999999975 355678899999999984445555556655 21 2 11
Q ss_pred Cccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
..++++.|||| .+|+|.+++. +|.+|+++..+++.||||||-
T Consensus 114 ~~EvllLmEyC-~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 114 VWEVLLLMEYC-KGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eeEEEeehhhc-cCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 24788999999 8899988883 688899999999999999998
Q ss_pred ccccCCCCCee---------eecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccc
Q 037624 288 TMHLYCDSSNL---------TLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 288 a~~~~~~~~~~---------~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 343 (408)
|.......... -..--|+-| +|+||||+||+||-|+....||+....
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------- 263 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------- 263 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------
Confidence 75432221110 012245556 899999999999999999999985321
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
..|++....-|.. ......+..|+..||+.+|++|+
T Consensus 264 ----laIlng~Y~~P~~---p~ys~~l~~LI~~mL~~nP~~RP 299 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPF---PNYSDRLKDLIRTMLQPNPDERP 299 (738)
T ss_pred ----eeEEeccccCCCC---ccHHHHHHHHHHHHhccCcccCC
Confidence 2344444432211 12344566788889999999993
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=206.45 Aligned_cols=200 Identities=15% Similarity=0.255 Sum_probs=135.5
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
...++|...+.||+|+||+||+|... .+..||+|.+.... ........|..|+.++. +|+|++++++++. ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~--de~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LKEREKSQLVIEVNVMRELKHKNIVRYIDRFL--NKAN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE--ecCC
Confidence 34468999999999999999999984 47789999987532 22234567899999986 7777777766511 2334
Q ss_pred ccchhhhhhcccchhhhhhhc--------------------------------------------cCcccccccc-----
Q 037624 246 ACFWFMNTWRGEACSVFCTMI--------------------------------------------MKPLSWIGLR----- 276 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~--------------------------------------------~k~~~~~l~~----- 276 (408)
...++++||+ ++++|..++. +||.|+++..
T Consensus 87 ~~lyIVMEY~-~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 87 QKLYILMEFC-DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CEEEEEEeCC-CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 5678999999 7777755431 4566777643
Q ss_pred ------------CCceEEeecccccccCCCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 277 ------------ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 277 ------------~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
...+||+|||+++...... ......||+.| .++||||||||+|||+||+.||.
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 2358999999998764322 22334677776 57899999999999999999986
Q ss_pred ccccccCCccccccchhhhccC-CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLD-PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....... .+..+.. +.+... .....+.+++..||+.+|++|++
T Consensus 245 ~~~~~~q--------li~~lk~~p~lpi~------~~S~eL~dLI~~~L~~dPeeRPS 288 (1021)
T PTZ00266 245 KANNFSQ--------LISELKRGPDLPIK------GKSKELNILIKNLLNLSAKERPS 288 (1021)
T ss_pred cCCcHHH--------HHHHHhcCCCCCcC------CCCHHHHHHHHHHhcCChhHCcC
Confidence 4321111 0111111 111110 11234667889999999999944
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-22 Score=187.64 Aligned_cols=201 Identities=20% Similarity=0.262 Sum_probs=135.6
Q ss_pred HhhcccceeecccceeEEEEEEeCC-----------------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-----------------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDI 231 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-----------------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~ 231 (408)
..+|...+.||+|+||.||+|...+ +..||+|.+.... .....+.|.+|++++. +|+|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCCE
Confidence 3567888999999999999998643 2468999987532 2234678899999887 88888
Q ss_pred ceeeeEeEeeecCCccchhhhhhcccchhhhhhh--------------------------------------------cc
Q 037624 232 ETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM--------------------------------------------IM 267 (408)
Q Consensus 232 ~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l--------------------------------------------~~ 267 (408)
++++++ +..+...++++||+ ++++|..++ ++
T Consensus 82 ~~~~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dl 156 (296)
T cd05051 82 ARLLGV----CTVDPPLCMIMEYM-ENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDL 156 (296)
T ss_pred eEEEEE----EecCCCcEEEEecC-CCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 888887 77777888899988 777665542 16
Q ss_pred CccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh--CCCCCcc
Q 037624 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM--GRQPGEL 331 (408)
Q Consensus 268 k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt--g~~p~~~ 331 (408)
+|.|+++++++.+||+|||+++........ .....++..| .++|||||||++|||++ |..|+..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred chhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 788888999999999999999865332211 1122334444 68999999999999998 6677653
Q ss_pred cccccCCccccccchhhhcc---CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 332 LSSLSSSSSSDQNIMLLDVL---DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+ ....... +..... .........+.+++..|++.+|++|++
T Consensus 237 ~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rpt 286 (296)
T cd05051 237 LTDQQVI------ENAGHFFRDDGRQIYL---PRPPNCPKDIYELMLECWRRDEEDRPT 286 (296)
T ss_pred cChHHHH------HHHHhccccccccccC---CCccCCCHHHHHHHHHHhccChhcCCC
Confidence 2111000 0000110 000000 001122346788999999999999944
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.7e-22 Score=183.08 Aligned_cols=200 Identities=22% Similarity=0.293 Sum_probs=136.3
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee--
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC-- 242 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~-- 242 (408)
.++++|+..+.||+|+||.||+|... +++.+|+|.+.... ...+.|.+|+.++. .|+|+++++++.....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 46788999999999999999999984 57889999986432 23467889998886 5777777777622111
Q ss_pred cCCccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeec
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
......++++||+ ++++|.+.+. ++|.|+++++++.+||+||
T Consensus 79 ~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 79 GNDDQLWLVMELC-GGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred CcceEEEEEEEcC-CCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCC
Confidence 1234578999999 7776654431 5677778888999999999
Q ss_pred ccccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhh
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
|++..............|+..| .++|||||||+++||+||+.|+...... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---------~~~~ 228 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---------RALF 228 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---------HHHH
Confidence 9987653322222223344444 5799999999999999999998632111 0111
Q ss_pred hccC---CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLD---PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d---~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.. +.+.. .......+.+++.+|++.||++|++
T Consensus 229 ~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rpt 265 (275)
T cd06608 229 KIPRNPPPTLKS-----PENWSKKFNDFISECLIKNYEQRPF 265 (275)
T ss_pred HhhccCCCCCCc-----hhhcCHHHHHHHHHHhhcChhhCcC
Confidence 1111 11111 1123345668889999999999954
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-22 Score=182.48 Aligned_cols=193 Identities=22% Similarity=0.291 Sum_probs=128.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|+..+.||+|+||.||+|+.. +|+.||+|+++.... ......+..|+..+. .|+|++++.++ +..+..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~----~~~~~~ 74 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGA----LFREGD 74 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEE----EecCCc
Confidence 46888899999999999999984 589999999875321 122345566666533 77888887777 667777
Q ss_pred chhhhhhcccchhhhhhh--------------------------------------ccCccccccccCCceEEeeccccc
Q 037624 248 FWFMNTWRGEACSVFCTM--------------------------------------IMKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l--------------------------------------~~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
.++++||+ + +++...+ +++|.|+++++++.+||+|||+++
T Consensus 75 ~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 75 VWICMEVM-D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred EEEEhhhh-c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 88899988 4 3332221 156777888899999999999998
Q ss_pred ccCCCCCeeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC-
Q 037624 290 HLYCDSSNLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD- 352 (408)
Q Consensus 290 ~~~~~~~~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d- 352 (408)
...... ..+...|+..| .++|||||||+++||+||+.|+..... ....+..+..
T Consensus 153 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~ 223 (283)
T cd06617 153 YLVDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--------PFQQLKQVVEE 223 (283)
T ss_pred cccccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--------CHHHHHHHHhc
Confidence 653221 11112333333 578999999999999999999853211 0011112221
Q ss_pred --CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 --PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 --~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+... .....+.+++..|++.+|++|++
T Consensus 224 ~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rp~ 254 (283)
T cd06617 224 PSPQLPAE------KFSPEFQDFVNKCLKKNYKERPN 254 (283)
T ss_pred CCCCCCcc------ccCHHHHHHHHHHccCChhhCcC
Confidence 222110 12234668889999999999944
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-22 Score=184.80 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=138.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++. +|+|++++.+. +......
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~----~~~~~~~ 91 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDS----YLVGDEL 91 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhhe----eeeCCcE
Confidence 5788889999999999999986 467889999986422 223567889998886 78888877777 6667788
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++++||+ +++++.+++. +++.|++++.++.+||+|||++........
T Consensus 92 ~lv~e~~-~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 92 WVVMEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred EEEEecC-CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999 8888876652 567777888889999999999876544332
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
......|+..| .++|||||||++||+++|+.||............... -.+.... ..
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~------~~~~~~~-----~~ 239 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN------GTPELQN-----PE 239 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC------CCCCCCC-----cc
Confidence 22333455555 6799999999999999999998643221110000000 0011110 11
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|++|++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~ 262 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGS 262 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcC
Confidence 12234667889999999999944
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.6e-22 Score=182.07 Aligned_cols=156 Identities=18% Similarity=0.256 Sum_probs=115.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccC--CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec-CC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWEN--EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI-KD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~-~~ 245 (408)
.+|...+.||+|+||.||+|... ++..||+|++..... ......+.+.+|+.++. +|+|++++.++ +.. ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~---~~~~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGC---LRDRAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEE---EEcCCC
Confidence 46888899999999999999874 588999999864321 12233457888999886 77777766665 222 23
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
...++++||. ++++|..++. ++|.|++++.++.+||+|||+++...
T Consensus 79 ~~~~l~~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 79 KTLTIFMEYM-PGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred CEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 5667888998 7777776552 57778888899999999999998653
Q ss_pred CCC---CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDS---SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~---~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... .......|+.+| .++|||||||+++||+||+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 211 111223466666 579999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-22 Score=181.39 Aligned_cols=196 Identities=17% Similarity=0.236 Sum_probs=137.0
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCc------chhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEP------ASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~------~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
|.....||+|+||.||+|... +++.||+|.+........ ...+.+.+|++++. +|+|+++++++ +..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~ 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGS----SLD 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEE----EEe
Confidence 455678999999999999874 578999998865332211 12356888998886 78888888777 667
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++++||+ ++++|..++. ++|.|+++++++.+||+|||+++..
T Consensus 78 ~~~~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 78 ADHLNIFLEYV-PGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred CCccEEEEEec-CCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 77888999998 8887766652 6788888889999999999999876
Q ss_pred CCCCCe------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 292 YCDSSN------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 292 ~~~~~~------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
...... .....|+..| .++|||||||+++||+||+.||........ .........+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~ 230 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA------IFKIGENASP 230 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH------HHHHhccCCC
Confidence 422111 1123455555 579999999999999999999864321110 0011111222
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.. .....+.+++..||+.+|++|++
T Consensus 231 ~~~~-------~~~~~~~~li~~~l~~~p~~Rp~ 257 (267)
T cd06628 231 EIPS-------NISSEAIDFLEKTFEIDHNKRPT 257 (267)
T ss_pred cCCc-------ccCHHHHHHHHHHccCCchhCcC
Confidence 2221 12345667888999999999954
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-22 Score=183.49 Aligned_cols=189 Identities=19% Similarity=0.258 Sum_probs=129.3
Q ss_pred eeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 178 YCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+.||+|+||.||+|.+.. +..+|+|.+...... ...+++.+|++++. .|+|+++++++ +. ....+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~-~~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGV----CK-GEPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEE----Ec-CCceEEE
Confidence 469999999999998632 268999998754322 34567899999886 78887777766 44 3456888
Q ss_pred hhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCee
Q 037624 252 NTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL 298 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~ 298 (408)
+||+ ++++|.+++. ++|.|++++.++.+||+|||+++.........
T Consensus 74 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 74 MELA-PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred EEeC-CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9998 7888877662 68888899999999999999998764333221
Q ss_pred e---ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 299 T---LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 299 ~---~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
. ...++..| .++|||||||+++||+| |+.||....... +...+......+ .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~----------~~~~~~~~~~~~---~ 219 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE----------VIAMLESGERLP---R 219 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH----------HHHHHHcCCcCC---C
Confidence 1 11122334 58999999999999998 999986432110 111111110000 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++.+||+.+|++|++
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~ 244 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPT 244 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcC
Confidence 1122345778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-22 Score=184.15 Aligned_cols=152 Identities=23% Similarity=0.260 Sum_probs=114.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||+|+.. +|+.||||++.... ........+.+|++++. +|+|+++++++ +..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDV----IHTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccc-cccccchHHHHHHHHHHhcCCCCCcchhhh----cccCCcEE
Confidence 4778899999999999999984 58899999986532 22233457889999987 88888888887 67777888
Q ss_pred hhhhhcccchhhhhhh-----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ . +++..++ .++|.|+++++++.+||+|||+++.....
T Consensus 76 ~v~e~~-~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 76 LVFEFL-H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred EEeecc-c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 999988 4 3443332 16777888999999999999998765432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........++..| .++|||||||+++||+||+.||..
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~ 203 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 203 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2211222233333 579999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-22 Score=182.27 Aligned_cols=190 Identities=19% Similarity=0.251 Sum_probs=125.3
Q ss_pred eeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec-CCccchh
Q 037624 178 YCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI-KDACFWF 250 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~-~~~~~~l 250 (408)
+.||+|+||.||+|...+ +..||+|++... ......+.|.+|+.++. +|+|+++++++ +. .+...++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGI----CLPSEGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEE----eecCCCCcEE
Confidence 468999999999998632 457999998532 22234567889998886 78887777765 43 4555778
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+++|+ .+++|..++. ++|.|+++++++.+||+|||+++.......
T Consensus 75 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 75 VLPYM-KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred EEecC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 88988 7777776652 678888899999999999999986532211
Q ss_pred e----eeecccCCCC------------cccchhhhhHHHHHHHhC-CCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 297 N----LTLLAGTYGY------------EKCDVYSFGVVALEILMG-RQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 297 ~----~~~~~gt~~y------------~k~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
. .....++..| .++|||||||+++||+|| ..|+...... .....+....... .
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~ 223 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---------DITVYLLQGRRLL-Q 223 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---------HHHHHHhcCCCCC-C
Confidence 0 0112233333 689999999999999995 4555422110 0011111111110 0
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 224 ---~~~~~~~~~~li~~cl~~~p~~Rp~ 248 (262)
T cd05058 224 ---PEYCPDPLYEVMLSCWHPKPEMRPT 248 (262)
T ss_pred ---CCcCCHHHHHHHHHHcCCChhhCCC
Confidence 0112345778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-22 Score=181.07 Aligned_cols=198 Identities=20% Similarity=0.303 Sum_probs=137.9
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|+||.||+|... +++.||+|.++.... .....+.+.+|++++. +|+|+++++++ +......++
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~----~~~~~~~~l 76 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGV----EVHREKVYI 76 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeee----EecCCEEEE
Confidence 666789999999999999974 688999999875432 2345678999999986 78888888777 777788899
Q ss_pred hhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 251 MNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
++||+ ++++|.+++. +++.|+++++++.+||+|||++.........
T Consensus 77 v~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 77 FMEYC-SGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred EEecC-CCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999 8888877652 5677888889999999999999876433221
Q ss_pred ee----ecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 298 LT----LLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 298 ~~----~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
.. ...|+..| .++||||||++++|+++|+.||....... .....+.....+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~- 229 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-----QIMFHVGAGHKPPIPD- 229 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-----HHHHHHhcCCCCCCCc-
Confidence 11 12333333 57899999999999999999986431100 0000011111112211
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 230 ----~~~~~~~~~~li~~~l~~~p~~R~~ 254 (264)
T cd06626 230 ----SLQLSPEGKDFLDRCLESDPKKRPT 254 (264)
T ss_pred ----ccccCHHHHHHHHHHccCCcccCCC
Confidence 1111334567888999999999944
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-22 Score=182.44 Aligned_cols=190 Identities=18% Similarity=0.273 Sum_probs=131.3
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhc
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWR 255 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~ 255 (408)
+.||+|+||.||+|...+++.||+|.+..... ......|.+|++++. .|+|++.++++ +......++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGV----CVQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEE----EecCCCeEEEEEcC
Confidence 36999999999999997799999999875322 134567899999886 67777777666 67777888999998
Q ss_pred ccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCeee--
Q 037624 256 GEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT-- 299 (408)
Q Consensus 256 ~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~-- 299 (408)
+++++.+++. ++|.|++++.++.+||+|||+++..........
T Consensus 75 -~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 75 -PGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred -CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 7777766651 678888899999999999999986532111100
Q ss_pred ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHH
Q 037624 300 LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366 (408)
Q Consensus 300 ~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 366 (408)
...++..| .++|||||||+++||+| |..|+..... ....+.+......+ .....
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~----------~~~~~~~~~~~~~~---~~~~~ 220 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN----------QQTRERIESGYRMP---APQLC 220 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH----------HHHHHHHhcCCCCC---CCccC
Confidence 01112222 68999999999999999 8888753211 01111121111110 01122
Q ss_pred HHHHHHHHHhhccCCCCCcCC
Q 037624 367 IVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 367 ~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.+++..|++.+|++|++
T Consensus 221 ~~~~~~li~~~l~~~p~~Rp~ 241 (251)
T cd05041 221 PEEIYRLMLQCWAYDPENRPS 241 (251)
T ss_pred CHHHHHHHHHHhccChhhCcC
Confidence 346778999999999999954
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-23 Score=191.31 Aligned_cols=156 Identities=21% Similarity=0.300 Sum_probs=124.9
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccch
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.+.|..-++||+||||.||-++.. +|+.+|.|++.+.+..........++|-.+|. ..|-. ++-.+.|.+...+...
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~-kV~s~-FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILE-KVSSP-FIVSLAYAFETKDALC 261 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHH-HhccC-cEEEEeeeecCCCceE
Confidence 356888899999999999999984 59999999997655444445556778888885 22222 3334455578888888
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+|+..| .+|+|.-|+. +||.|++||+.|+++|||.|||-.+...
T Consensus 262 lVLtlM-NGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 262 LVLTLM-NGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEee-cCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 999999 8888877762 7999999999999999999999988644
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
. .....+||.|| ...|.||+||++|||+.|+.||.
T Consensus 341 ~-~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr 387 (591)
T KOG0986|consen 341 K-PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR 387 (591)
T ss_pred C-ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence 3 33455999999 57899999999999999999985
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-22 Score=182.87 Aligned_cols=155 Identities=22% Similarity=0.242 Sum_probs=108.0
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeee-cCC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVC-IKD 245 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~-~~~ 245 (408)
.|...+.||+|+||+||+|+.. +|+.||+|.++..... ......+.+|++++. .|+|++++++++.... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 3677789999999999999985 5889999998753222 222345667777664 4777777666522111 112
Q ss_pred ccchhhhhhcccchhhhhhh-----------------------------------ccCccccccccCCceEEeecccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++++||+ ++ ++..++ +++|.|+++++++.+||+|||+++.
T Consensus 80 ~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 80 TKVTLVFEHV-DQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred ceEEEEEccc-cc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 3467788887 42 443332 1788899999999999999999987
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... ..+...||..| .++|||||||+++||++|+.||..
T Consensus 158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~ 209 (288)
T cd07863 158 YSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 209 (288)
T ss_pred ccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCC
Confidence 64322 12234456555 789999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-22 Score=183.05 Aligned_cols=196 Identities=17% Similarity=0.236 Sum_probs=137.0
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||+|... +|..||+|.+..... .....+.+.+|++++. +|+|++++++. +..+...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~----~~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFAS----FQENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhhe----eccCCeEE
Confidence 4677889999999999999985 478899999865322 2233567889999886 78888887777 77778889
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCC-ceEEeecccccccCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLREL-EAFVADFGMTMHLYC 293 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~-~~ki~DfGla~~~~~ 293 (408)
+++||+ ++++|.+++. ++|.|++++++. .+||+|||.+.....
T Consensus 76 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 76 IVMEYC-DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred EEEecC-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 999999 7777766542 566777777664 579999999987654
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.........|+..| .++|||||||+++||++|+.|+..... ......+......... .
T Consensus 155 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~-~ 224 (257)
T cd08225 155 SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL---------HQLVLKICQGYFAPIS-P 224 (257)
T ss_pred CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHHHHHHhcccCCCCC-C
Confidence 33222233456555 689999999999999999999863211 1111222222221110 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++.+|++.+|++|++
T Consensus 225 ---~~~~~~~~~i~~~l~~~p~~Rpt 247 (257)
T cd08225 225 ---NFSRDLRSLISQLFKVSPRDRPS 247 (257)
T ss_pred ---CCCHHHHHHHHHHhccChhhCcC
Confidence 11234667888999999999954
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=184.88 Aligned_cols=192 Identities=18% Similarity=0.213 Sum_probs=132.1
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|+||.||+|+. .++..||+|++.............+.+|++++. +|+|++++.++ +..+...++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~~l 102 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGC----YLREHTAWL 102 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEE----EeeCCeEEE
Confidence 66778899999999999997 458899999987543333334567889999886 78888887777 777778889
Q ss_pred hhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||+ .+ ++.+.+ .++|.|++++.++.+||+|||++.......
T Consensus 103 v~e~~-~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (317)
T cd06635 103 VMEYC-LG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN- 179 (317)
T ss_pred EEeCC-CC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc-
Confidence 99998 43 433332 167888888899999999999987654321
Q ss_pred eeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 297 NLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 297 ~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
...|+..| .++|||||||+++||++|+.|+..... ......+.........
T Consensus 180 ---~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~-- 245 (317)
T cd06635 180 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALYHIAQNESPTLQ-- 245 (317)
T ss_pred ---cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---------HHHHHHHHhccCCCCC--
Confidence 11233322 689999999999999999999753211 0111112111111100
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.+|++|++
T Consensus 246 -~~~~~~~l~~li~~~l~~~p~~Rpt 270 (317)
T cd06635 246 -SNEWSDYFRNFVDSCLQKIPQDRPT 270 (317)
T ss_pred -CccccHHHHHHHHHHccCCcccCcC
Confidence 1122334678888999999999933
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-22 Score=202.59 Aligned_cols=200 Identities=21% Similarity=0.310 Sum_probs=143.0
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeC----C----CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceee
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLT----S----SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLL 235 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~----~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~ 235 (408)
++...++....+.+|+|.||.|++|... . ...||||.++..... ...+.+..|+++|. +|+|+++++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 3344445555668999999999999852 1 347999999864332 46788999999997 899999999
Q ss_pred eEeEeeecCCccchhhhhhcccchhhhhhhccCc----------------------------------------------
Q 037624 236 SFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKP---------------------------------------------- 269 (408)
Q Consensus 236 ~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~~k~---------------------------------------------- 269 (408)
|+ |...+..+++.||+ +.|+|..++..+.
T Consensus 369 G~----~t~~~~~~~v~Ey~-~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD 443 (609)
T KOG0200|consen 369 GA----CTQDGPLYVIVEYA-EHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD 443 (609)
T ss_pred ee----eccCCceEEEEEec-cCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence 99 99988999999999 9999988874322
Q ss_pred ---cccccccCCceEEeecccccccCCCCCee-eecccCCC-------------C-cccchhhhhHHHHHHHh-CCCCCc
Q 037624 270 ---LSWIGLRELEAFVADFGMTMHLYCDSSNL-TLLAGTYG-------------Y-EKCDVYSFGVVALEILM-GRQPGE 330 (408)
Q Consensus 270 ---~~~~l~~~~~~ki~DfGla~~~~~~~~~~-~~~~gt~~-------------y-~k~DVySfGvvl~Ellt-g~~p~~ 330 (408)
.|+++.++..+||+|||+||......... ..-.||.. | .|+|||||||+||||+| |..||.
T Consensus 444 LAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 444 LAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred hhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 13335577899999999999765443322 21222222 1 89999999999999999 899986
Q ss_pred ccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
.... ...+.+.+.+.-+. ..+..|..++.+++..||+.+|++|
T Consensus 524 ~~~~---------~~~l~~~l~~G~r~---~~P~~c~~eiY~iM~~CW~~~p~~R 566 (609)
T KOG0200|consen 524 GIPP---------TEELLEFLKEGNRM---EQPEHCSDEIYDLMKSCWNADPEDR 566 (609)
T ss_pred CCCc---------HHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHhCCCcccC
Confidence 4210 11122233332222 2233456677799999999999999
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-22 Score=186.32 Aligned_cols=194 Identities=19% Similarity=0.250 Sum_probs=135.7
Q ss_pred ccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 175 DIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+....||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++. .|+|+++++++ +..+...+++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~----~~~~~~~~iv 96 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKS----YLVGEELWVL 96 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhh----eeeCCeEEEE
Confidence 33457999999999999874 68899999986432 223467888998886 78888888887 6677788899
Q ss_pred hhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCeee
Q 037624 252 NTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT 299 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~ 299 (408)
+||+ +++++..++. +++.|++++.++.+||+|||+++..........
T Consensus 97 ~e~~-~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 97 MEFL-QGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred EecC-CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 9999 7777766542 677888899999999999999976544332233
Q ss_pred ecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 300 LLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 300 ~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
...|+..| .++|||||||+++||++|+.||......... ..+.....+.... .....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~~ 244 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------KRLRDSPPPKLKN-----AHKIS 244 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHhccCCCCccc-----cCCCC
Confidence 45567666 6799999999999999999998632211100 0000000111110 00112
Q ss_pred HHHHHHHHhhccCCCCCcCC
Q 037624 368 VLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+++..|++.+|++|++
T Consensus 245 ~~l~~~i~~~l~~~P~~Rps 264 (297)
T cd06659 245 PVLRDFLERMLTREPQERAT 264 (297)
T ss_pred HHHHHHHHHHhcCCcccCcC
Confidence 34567888999999999943
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-22 Score=188.10 Aligned_cols=203 Identities=16% Similarity=0.236 Sum_probs=137.9
Q ss_pred HhhcccceeecccceeEEEEEEe--------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL--------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~--------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
-++|...+.||+|+||.||+|+. .++..||+|.+.... .....+.+.+|+.++. +|+|+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~-- 89 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGA-- 89 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEE--
Confidence 45788889999999999999974 124579999986421 2234567889998885 68888888887
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+......++++||+ ++++|.+++ +++|.
T Consensus 90 --~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 166 (304)
T cd05101 90 --CTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR 166 (304)
T ss_pred --EecCCceEEEEecC-CCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence 77777888999999 777766543 16788
Q ss_pred ccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|+++++++.+||+|||+++........ .....++..| .++|||||||++|||+| |..|+......
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 888888999999999999876432211 1112233333 68999999999999999 78887532111
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
. +.+.+....... ....+...+.+++.+||+.+|++| |.+++..+
T Consensus 247 ~----------~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 247 E----------LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred H----------HHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 0 111111111100 011234457788899999999999 44554444
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-22 Score=182.39 Aligned_cols=200 Identities=20% Similarity=0.304 Sum_probs=134.7
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCC-------cchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEE-------PASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~-------~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
|...+.||+|+||.||+|.. .+|+.||+|.++...... ....+.+.+|++++. +|+|+++++++ +.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~ 78 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF----ET 78 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE----ec
Confidence 55678899999999999987 468899999885321111 112346788988886 78888888877 77
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
.....++++||+ ++++|..++. +++.|+++++++.+|++|||+++.
T Consensus 79 ~~~~~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 79 TEEYLSIFLEYV-PGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred cCCceEEEEecC-CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 778889999999 8888776652 567788888999999999999976
Q ss_pred cCCCCC--eeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCC
Q 037624 291 LYCDSS--NLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 291 ~~~~~~--~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
...... ......|+..| .++||||||++++|+++|+.|+........ ..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---------~~~~~~~~ 228 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA---------MFKLGNKR 228 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH---------HHHhhccc
Confidence 532111 11122344433 579999999999999999999853221100 11111000
Q ss_pred CCCcc-chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPV-DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~-~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..... .....+....+.+++..|++.+|++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 262 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT 262 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCC
Confidence 00000 0111122345677889999999999954
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-22 Score=180.75 Aligned_cols=198 Identities=18% Similarity=0.248 Sum_probs=134.8
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++.. .+++.||+|.+..... .....+.+.+|++++. +|+|++++.++.. ...+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRII--DRSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeee--cCCCCEEE
Confidence 467778999999999999987 4678999999875322 2334567888999886 7777777666511 12344567
Q ss_pred hhhhhcccchhhhhhhc------------------------------------------cCccccccccCCceEEeeccc
Q 037624 250 FMNTWRGEACSVFCTMI------------------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~------------------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
+++||+ ++++|.+++. ++|.|+++++++.+||+|||+
T Consensus 78 ~~~e~~-~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 78 IVMEYC-EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred EEehhc-cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccc
Confidence 888988 7776654431 446667777889999999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
++.............|+..| .++|||||||+++||++|+.|+..... ......+.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~ 227 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---------LQLASKIKEGKF 227 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---------HHHHHHHhcCCC
Confidence 98875443323334566655 578999999999999999999864320 011111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .........+.+++..|++.+|++|++
T Consensus 228 ~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 255 (265)
T cd08217 228 R----RIPYRYSSELNEVIKSMLNVDPDKRPS 255 (265)
T ss_pred C----CCccccCHHHHHHHHHHccCCcccCCC
Confidence 1 111123345778889999999999944
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-22 Score=186.89 Aligned_cols=195 Identities=17% Similarity=0.263 Sum_probs=131.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|+..+.||+|+||.||+|.. .+|. .||+|.+.... ......+|.+|+.++. .|+|+++++++ +..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~----~~~ 80 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGV----CLS 80 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEE----EcC
Confidence 4677788999999999999987 3444 47889886422 2233456889998886 78888888877 554
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
. ...++++|+ ++|++.+++. ++|.|+++++++.+||+|||+++.
T Consensus 81 ~-~~~~v~e~~-~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 81 P-TIQLVTQLM-PHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred C-Cceeeehhc-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccc
Confidence 3 355778888 7777766542 688888898899999999999987
Q ss_pred cCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .....++..| .++|||||||++|||+| |+.|+...... ...+++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~----------~~~~~~~~~~ 228 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR----------EIPDLLEKGE 228 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----------HHHHHHHCCC
Confidence 6432221 1112233344 58999999999999998 88998532110 0111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. ...+...+.+++..||..+|++|++
T Consensus 229 ~~~~---~~~~~~~~~~li~~c~~~~p~~Rp~ 257 (303)
T cd05110 229 RLPQ---PPICTIDVYMVMVKCWMIDADSRPK 257 (303)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCChhhCcC
Confidence 1100 0112345778889999999999944
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=187.73 Aligned_cols=158 Identities=18% Similarity=0.158 Sum_probs=115.6
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee--ecC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV--CIK 244 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~--~~~ 244 (408)
..++|...+.||+|+||.||+|... .++.||||++.... .+....+.+.+|+.++. +|+|++++++.+... ...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3568999999999999999999974 58889999997532 22334567888998886 777777776652210 011
Q ss_pred Cccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 245 DACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
....++++||+ ++ ++...+ ++||.|++++.++.+||+|||+++....
T Consensus 101 ~~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 101 FQDVYIVMELM-DA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred cCeEEEEEeCC-CC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 23467888988 43 332221 2789999999999999999999987543
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. ......||..| .++|||||||+++||+||+.||..
T Consensus 179 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 179 SF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred CC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 21 22334677777 689999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=181.39 Aligned_cols=198 Identities=20% Similarity=0.223 Sum_probs=141.6
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++. +|+|++++..+ +..+...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 76 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYS----FQDEENMY 76 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHh----hcCCCeEE
Confidence 4777899999999999999985 58899999997644333345678999999886 78888887777 67777889
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+++||+ ++++|..++. ++|.|+++++++.++|+|||++.......
T Consensus 77 lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 77 LVVDLL-LGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred EEEeCC-CCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 999999 8888776652 56778888899999999999987654331
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC-CCCCCccchhH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD-PRLSPPVDRMV 363 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~ 363 (408)
......|+..| .++||||||++++||++|+.|+...... .......... ..... +
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~-----~ 222 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-------IRDQIRAKQETADVLY-----P 222 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-------HHHHHHHHhccccccC-----c
Confidence 11223444444 6899999999999999999998643210 0001111111 11111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
......+.+++..||+.+|.+|++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 223 ATWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred ccCcHHHHHHHHHHccCChhHcCCc
Confidence 1223456688899999999999554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=179.20 Aligned_cols=155 Identities=17% Similarity=0.261 Sum_probs=116.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccC--CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC--
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWEN--EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-- 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-- 244 (408)
++|...+.||+|+||.||+|... +|..||+|.+..... ......+.+.+|+.++. +|+|++++.++ +..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~ 77 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGC----LRDPM 77 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeE----eccCC
Confidence 46888899999999999999974 588999999864221 11233567888999886 77777776665 333
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 78 ~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 78 ERTLSIFMEHM-PGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred CceEEEEEEec-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 34567889999 8888887652 6778888889999999999999865
Q ss_pred CCCC---CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCDS---SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~~---~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.... .......|+..| .++|||||||++|||++|+.|+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 3211 112234466666 679999999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-22 Score=187.61 Aligned_cols=192 Identities=20% Similarity=0.255 Sum_probs=135.8
Q ss_pred ceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 177 KYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
...||+|+||.||++... ++..||||++... .....+.+.+|+.++. +|+|++++.+. +..++..++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~----~~~~~~~~lv~e 99 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNS----YLVGDELWVVME 99 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHh----eecCCeEEEEEe
Confidence 466999999999999874 5889999998642 2234567889998886 78888888777 667788899999
Q ss_pred hcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCeeeec
Q 037624 254 WRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 254 ~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
|+ +++++..++. ++|.|+++++++++||+|||++.............
T Consensus 100 ~~-~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 178 (292)
T cd06658 100 FL-EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL 178 (292)
T ss_pred CC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence 99 8888776541 67888889999999999999997654333222334
Q ss_pred ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHH
Q 037624 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVL 369 (408)
Q Consensus 302 ~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 369 (408)
.|+..| .++|||||||+++||++|+.||........ ...+.....+.+... ......
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~-----~~~~~~ 247 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA------MRRIRDNLPPRVKDS-----HKVSSV 247 (292)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhcCCCccccc-----cccCHH
Confidence 566666 689999999999999999999863221100 001112222222211 011224
Q ss_pred HHHHHHhhccCCCCCcCC
Q 037624 370 VSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 370 ~~~l~~~C~~~~P~~Rm~ 387 (408)
+..++..|++.+|++|++
T Consensus 248 ~~~li~~~l~~~P~~Rpt 265 (292)
T cd06658 248 LRGFLDLMLVREPSQRAT 265 (292)
T ss_pred HHHHHHHHccCChhHCcC
Confidence 556778899999999954
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-22 Score=183.36 Aligned_cols=196 Identities=19% Similarity=0.301 Sum_probs=135.3
Q ss_pred hhcccceeecccceeEEEEEEeCC-C---cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-S---KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g---~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|.... + ..||||.++... +....+.|..|+.++. .|+|++++.++ +..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~----~~~~ 77 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGV----VTKS 77 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEE----ECCC
Confidence 357778999999999999999743 3 369999987532 2334578999999886 78888887777 7777
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|..++. ++|.|++++.++.+|++|||+++..
T Consensus 78 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 78 RPVMIITEFM-ENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred CceEEEEecC-CCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 8889999999 7888776652 6778888889999999999998765
Q ss_pred CCCCCe--e-eeccc--CCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCC
Q 037624 292 YCDSSN--L-TLLAG--TYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 292 ~~~~~~--~-~~~~g--t~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
...... . ....| +..| .++|||||||+++|+++ |+.||...... ...+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~----------~~~~~i~~ 226 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ----------DVINAIEQ 226 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH----------HHHHHHHc
Confidence 432211 1 11111 1223 68999999999999987 99998532111 01111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+ ...++...+.+++..||+.+|++|++
T Consensus 227 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~ 257 (269)
T cd05065 227 DYRLP---PPMDCPTALHQLMLDCWQKDRNARPK 257 (269)
T ss_pred CCcCC---CcccCCHHHHHHHHHHcCCChhhCcC
Confidence 11110 01123445678899999999999933
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.5e-22 Score=186.74 Aligned_cols=204 Identities=15% Similarity=0.205 Sum_probs=136.8
Q ss_pred HhhcccceeecccceeEEEEEEeC--------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT--------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
.++|...+.||+|+||.||+|+.. ....||+|.++... .......+.+|++++. .|+|+++++++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~-- 86 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV-- 86 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE--
Confidence 357888899999999999999742 24578999987432 2234567889998886 58888888777
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+......++++||+ ++|+|..++ +++|.
T Consensus 87 --~~~~~~~~lv~e~~-~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~ 163 (314)
T cd05099 87 --CTQEGPLYVIVEYA-AKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAAR 163 (314)
T ss_pred --EccCCceEEEEecC-CCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccce
Confidence 77777888999999 777776543 16778
Q ss_pred ccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|+++++++++||+|||+++......... ....++..| .++|||||||++|||+| |+.|+......
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 164 NVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred eEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 8888899999999999998654221111 111122233 68999999999999999 88887532110
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccccc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEIS 394 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~~ 394 (408)
. +.+.+...... .....+...+.+++.+|++.+|++| +.+.+..+.
T Consensus 244 ---------~-~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 244 ---------E-LFKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred ---------H-HHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0 11111111100 0011223456688899999999999 444444443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-22 Score=184.69 Aligned_cols=201 Identities=22% Similarity=0.330 Sum_probs=136.9
Q ss_pred cccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|+||+||++.... ++.+|+|.+...... ........+|+.++. +|+|++++.++ .......++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~----~~~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRLRHPNIVQILDV----FQDDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHHTBTTBCHEEEE----EEESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhcccccccccccccccc----ccccccccc
Confidence 4567899999999999999855 668999999764321 112223345777776 78888888888 666777889
Q ss_pred hhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 251 MNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++|+ +.+++.+++. ++|.|+++++++.++|+|||.+.........
T Consensus 76 v~~~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 76 VMEYC-PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp EEEEE-TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred ccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999 7778876662 7899999999999999999999764222223
Q ss_pred eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 298 LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 298 ~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
.....||..| .++||||+|++++||++|+.|+...... ...........+...... ....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~ 227 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD------DQLEIIEKILKRPLPSSS-QQSR 227 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH------HHHHHHHHHHHTHHHHHT-TSHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccch------hhhhhhhhcccccccccc-cccc
Confidence 3334455444 7899999999999999999998743100 011111111111110000 0000
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.+|++|++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~ 250 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPS 250 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTT
T ss_pred hhHHHHHHHHHHHccCChhHCcC
Confidence 11256778889999999999955
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-21 Score=181.25 Aligned_cols=154 Identities=19% Similarity=0.197 Sum_probs=112.6
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
++++|...+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|++++. +|+|++.+.++ +..+.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~----~~~~~ 76 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDI----IHTKE 76 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEE----EecCC
Confidence 467899999999999999999987 4588999999865322 222346778988886 77877777666 55666
Q ss_pred cchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 247 CFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
..++++||+ .+ ++..++ +++|.|++++.++++||+|||+++...
T Consensus 77 ~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 77 TLTFVFEYM-HT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred eEEEEEecc-cC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 778888888 43 333222 168888899999999999999997643
Q ss_pred CCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..........++..| .++|||||||+++||+||+.||+.
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~ 206 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPG 206 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 222111122233333 578999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-22 Score=187.42 Aligned_cols=204 Identities=16% Similarity=0.220 Sum_probs=136.6
Q ss_pred HhhcccceeecccceeEEEEEEeC--------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT--------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
.++|...+.||+|+||.||++... ++..+|+|.++... .......+.+|++++. +|+|+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~-- 92 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA-- 92 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE--
Confidence 357888999999999999999752 23469999997532 2233467888998886 68888888887
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+......++++||+ ++++|.+++ +++|.
T Consensus 93 --~~~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~ 169 (307)
T cd05098 93 --CTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR 169 (307)
T ss_pred --EecCCceEEEEecC-CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence 77777888999998 777765443 15677
Q ss_pred ccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|+++++++++||+|||+++......... ....++..| .++|||||||+++||++ |+.|+.....
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~- 248 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV- 248 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-
Confidence 7788889999999999997653211110 111122233 68999999999999998 8888753211
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccccc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEIS 394 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~~ 394 (408)
..+.+.+......+ ........+.+++..|++.+|++| |.+++..+.
T Consensus 249 ---------~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 249 ---------EELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred ---------HHHHHHHHcCCCCC---CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 01111111111110 011223456788899999999999 545544443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-22 Score=182.36 Aligned_cols=196 Identities=17% Similarity=0.279 Sum_probs=135.5
Q ss_pred hhcccceeecccceeEEEEEEeCC-Cc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.+|...+.||+|+||.||+|...+ |. .||+|.+.... .......+.+|+.++. +|+|+++++++ +..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGI----CLS 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEE----Eec
Confidence 467778999999999999999743 33 58999886532 2334567889999887 78888888887 555
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++++||+ ++|++.+++. ++|.|+++++++.+||+|||+++.
T Consensus 81 -~~~~~v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 81 -SQVQLITQLM-PLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred -CceEEEEecC-CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 6677889998 8888877652 678888898999999999999987
Q ss_pred cCCCCCeee--ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSNLT--LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~~~--~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
......... ...++..| .++|||||||+++|++| |+.|++..... .+.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----------~~~~~~~~~~ 228 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV----------EIPDLLEKGE 228 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH----------HHHHHHhCCC
Confidence 653322111 11112233 68999999999999999 99998643110 0111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
..+. +..+...+.+++..||..+|++|++.
T Consensus 229 ~~~~---~~~~~~~~~~~~~~~l~~~p~~Rp~~ 258 (279)
T cd05057 229 RLPQ---PPICTIDVYMVLVKCWMIDAESRPTF 258 (279)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCChhhCCCH
Confidence 1000 01123456788899999999999543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.5e-22 Score=184.14 Aligned_cols=199 Identities=20% Similarity=0.276 Sum_probs=139.9
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
..++.|+..+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++. +|+|++++.+. +...
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~ 87 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDS----YLVG 87 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEE----EEEC
Confidence 45667888889999999999999986 688999999975322 3567889999886 77777777776 6666
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. ++|.|++++.++.+||+|||++...
T Consensus 88 ~~~~lv~e~~-~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 88 DELWVVMEYM-DGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred CEEEEEEecc-CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 7888999999 7778876652 5677777888999999999998765
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...........|+..| .++|||||||+++||+||+.|+....... ....+........
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~- 236 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR---------ALFLITTKGIPPL- 236 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHHhcCCCCC-
Confidence 4332222223345444 68999999999999999999986432111 0111111111110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.+|.+|++
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt 263 (286)
T cd06614 237 -KNPEKWSPEFKDFLNKCLVKDPEKRPS 263 (286)
T ss_pred -cchhhCCHHHHHHHHHHhccChhhCcC
Confidence 011112345678889999999999944
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-22 Score=184.60 Aligned_cols=197 Identities=19% Similarity=0.237 Sum_probs=135.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||++... +|+.||+|.+... .+......+.+|++++. +|+|++++++. +..+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGA----FFIEGAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhh----eecCCeE
Confidence 35777889999999999999985 6889999998642 12233567889999886 78888888777 6667788
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ +++++..++. ++|.|++++.++.+||+|||+++..
T Consensus 75 ~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 75 YMCMEYM-DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred EEEEeec-CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 8899998 7777654431 4566777888889999999998765
Q ss_pred CCCCCeeeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 292 YCDSSNLTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
.... .....|+.+| .++|||||||+++||+||+.||....... ....+..+.+.
T Consensus 154 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~ 225 (286)
T cd06622 154 VASL--AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN------IFAQLSAIVDG 225 (286)
T ss_pred cCCc--cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh------HHHHHHHHhhc
Confidence 3211 1112233333 47899999999999999999986321100 00111222221
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
... .........+.+++..|++.+|++|++
T Consensus 226 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~ 255 (286)
T cd06622 226 DPP----TLPSGYSDDAQDFVAKCLNKIPNRRPT 255 (286)
T ss_pred CCC----CCCcccCHHHHHHHHHHcccCcccCCC
Confidence 111 011123345668889999999999944
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=182.72 Aligned_cols=152 Identities=20% Similarity=0.261 Sum_probs=113.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|++|.||+|... +++.||+|.+...... .....+.+|++++. +|+|++++.++ +..+...
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~ 78 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDI----IHTKKTL 78 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEE----EecCCeE
Confidence 56888899999999999999985 6889999998753211 22345778999986 77877777776 6677788
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++ +|..++. ++|.|+++++++.+||+|||+++.....
T Consensus 79 ~lv~e~~-~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 79 TLVFEYL-DT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred EEEEecC-CC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 9999998 53 6655441 6778888999999999999998754321
Q ss_pred CCeeeecc------------cCCCC-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLA------------GTYGY-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~------------gt~~y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........ |+..| .++|||||||+++||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 206 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG 206 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11111111 22223 689999999999999999999854
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-22 Score=184.30 Aligned_cols=199 Identities=22% Similarity=0.289 Sum_probs=136.3
Q ss_pred hcccceeecccceeEEEEEEe----CCCcEEEEEecccccCC-CcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL----TSSKVIALKKLHHWENE-EPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
+|+..+.||+|+||.||++.. .+|+.||+|.+...... .....+.+.+|++++. .|++++.+..+ +..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~ 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA----FQT 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeE----eec
Confidence 466778999999999999986 36889999998753221 1223466788998886 57777777666 556
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+...++++||+ ++++|.+++. ++|.|+++++++++||+|||+++..
T Consensus 77 ~~~~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 77 DTKLHLILDYI-NGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred CCeEEEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 67788999999 8888887762 6778888999999999999999875
Q ss_pred CCCCCe-eeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 292 YCDSSN-LTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 292 ~~~~~~-~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
...... .....|+..| .++|||||||+++||+||+.|+........ .......+......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~ 230 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS-----QAEISRRILKSEPP 230 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc-----HHHHHHHhhccCCC
Confidence 432211 1223455554 479999999999999999999863211100 00001111111110
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
........+.+++..|++.+|++|+
T Consensus 231 -----~~~~~~~~~~~ll~~~l~~~p~~R~ 255 (290)
T cd05613 231 -----YPQEMSALAKDIIQRLLMKDPKKRL 255 (290)
T ss_pred -----CCccCCHHHHHHHHHHhcCCHHHhc
Confidence 0111233466888999999999994
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.1e-22 Score=170.47 Aligned_cols=189 Identities=19% Similarity=0.278 Sum_probs=128.6
Q ss_pred cceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhh
Q 037624 176 IKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
....||.|..|.|+++++. .|..+|||.+.... +....+..+..+.++. ..+-+|+.+|| +..+...++-
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~Gy----Fi~n~dV~Ic 169 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGY----FITNTDVFIC 169 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeE----EeeCchHHHH
Confidence 3456999999999999985 48899999998643 3445667778888776 23455555555 5556666677
Q ss_pred hhhcccchh--hh-----------------------hhh---------ccCccccccccCCceEEeecccccccCCCCCe
Q 037624 252 NTWRGEACS--VF-----------------------CTM---------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 252 ~e~~~~~g~--l~-----------------------~~l---------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
||.|. .+- |. .|+ ++||.|+++|+.+++|++|||++-.+... ..
T Consensus 170 MelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kA 247 (391)
T KOG0983|consen 170 MELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KA 247 (391)
T ss_pred HHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc-cc
Confidence 77662 110 00 111 27999999999999999999999766432 22
Q ss_pred eeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC---CCCCCcc
Q 037624 298 LTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD---PRLSPPV 359 (408)
Q Consensus 298 ~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~ 359 (408)
.+..+|.+.| -++|||||||.|+||+||+.||.... .....+..+++ |.+++.
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~--------tdFe~ltkvln~ePP~L~~~- 318 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK--------TDFEVLTKVLNEEPPLLPGH- 318 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC--------ccHHHHHHHHhcCCCCCCcc-
Confidence 2345666666 57999999999999999999997421 11222333433 333321
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..-...+.++...|+++|+.+|
T Consensus 319 ----~gFSp~F~~fv~~CL~kd~r~R 340 (391)
T KOG0983|consen 319 ----MGFSPDFQSFVKDCLTKDHRKR 340 (391)
T ss_pred ----cCcCHHHHHHHHHHhhcCcccC
Confidence 1123346677788999999999
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.5e-22 Score=181.52 Aligned_cols=146 Identities=17% Similarity=0.272 Sum_probs=108.1
Q ss_pred eecccceeEEEEEEeCC---CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 179 CFGTGGYGSVYIAQLTS---SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~~---g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.||+|+||.||+|...+ ...+|+|.+.... .......|.+|++++. +|+|++++++. +......++++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~----~~~~~~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQ----CIESIPYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEE----ECCCCceEEEEE
Confidence 58999999999998643 3468888876422 2234567889998875 78888888877 777888999999
Q ss_pred hcccchhhhhhhc--------------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 254 WRGEACSVFCTMI--------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 254 ~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
|+ ++|+|.+++. +||.|+++++++++||+|||+++......
T Consensus 76 ~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 76 FC-PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred eC-CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch
Confidence 99 8888876541 67888889999999999999987543221
Q ss_pred Cee--eecccCCCC-------------------cccchhhhhHHHHHHHh-CCCCCcc
Q 037624 296 SNL--TLLAGTYGY-------------------EKCDVYSFGVVALEILM-GRQPGEL 331 (408)
Q Consensus 296 ~~~--~~~~gt~~y-------------------~k~DVySfGvvl~Ellt-g~~p~~~ 331 (408)
... ....++..| .++|||||||++|||++ |+.||..
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 212 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPD 212 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCc
Confidence 110 111222222 58999999999999999 7888753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.5e-22 Score=182.51 Aligned_cols=153 Identities=20% Similarity=0.279 Sum_probs=117.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||+|... +++.||||+++... ......+.+.+|++++. +|+|+++++++ +..+...+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 76 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEA----FRRKGRLY 76 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhhe----EEECCEEE
Confidence 5788899999999999999985 57899999987532 22334578899999986 78888888887 66677889
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+++||+ +++.+..... +++.|+++++++.+||+|||++........
T Consensus 77 iv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 77 LVFEYV-ERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EEEecC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 999999 6665543221 577788888999999999999987654332
Q ss_pred -eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 -NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 -~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......|+..| .++||||||++++||++|+.|+..
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11223334333 689999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.7e-22 Score=180.94 Aligned_cols=190 Identities=17% Similarity=0.253 Sum_probs=131.2
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|... |..||+|.++.. ...+.|.+|+.++. +|+|++++.++ ....+...+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~---~~~~~~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGV---IVEEKGGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEE---EEcCCCceE
Confidence 46788899999999999999875 778999998642 12467899999886 67777776655 234556678
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|.+++. ++|.|+++++++.+|++|||+++.....
T Consensus 77 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 77 IVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEEECC-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 899999 8888776542 6788888999999999999999865332
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.. ...++..| .++|||||||+++||+| |+.|+...... .+...+.......
T Consensus 156 ~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~----------~~~~~~~~~~~~~--- 219 (256)
T cd05082 156 QD---TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----------DVVPRVEKGYKMD--- 219 (256)
T ss_pred CC---CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH----------HHHHHHhcCCCCC---
Confidence 21 11122223 68999999999999998 99997532110 0111111111110
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+...+.+++..|++.+|++|++
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rpt 245 (256)
T cd05082 220 APDGCPPVVYDVMKQCWHLDAATRPS 245 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 01123345678889999999999943
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=181.37 Aligned_cols=196 Identities=20% Similarity=0.249 Sum_probs=136.7
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|...+.||+|++|.||++.. .+++.+|+|++... .....+.+.+|+.++. .|+|+++++++ +......+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~----~~~~~~~~ 92 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSS----YLVGDELW 92 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEE----EEcCCeEE
Confidence 344457899999999999987 46889999998642 2223456888998886 78888887776 56677788
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+++||+ ++++|.+++. ++|.|++++.++.++++|||++.........
T Consensus 93 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 93 VVMEFL-EGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred EEEecc-CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence 999998 8888876641 6788888999999999999998765433222
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....|+..| .++|||||||+++||++|+.||........ ...+.....+.+... ..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~-----~~ 240 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA------MKRIRDNLPPKLKNL-----HK 240 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH------HHHHHhcCCCCCccc-----cc
Confidence 2233466555 689999999999999999999864221110 000111111111110 11
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..||+.+|++|++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt 262 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRAT 262 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcC
Confidence 2345778889999999999944
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-22 Score=183.78 Aligned_cols=206 Identities=18% Similarity=0.201 Sum_probs=135.1
Q ss_pred hhcccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
..|...+.||+|+||.||++.+ .++..||+|.++... .....+.|.+|++++. .|+|++++.++ +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~ 77 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGI----CTE 77 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeE----Eec
Confidence 3467778999999999999985 347789999987532 2334567999999886 77777777766 444
Q ss_pred C--ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccc
Q 037624 245 D--ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 245 ~--~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
. ...++++||+ ++++|..++. ++|.|+++++++.+||+|||++
T Consensus 78 ~~~~~~~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 78 DGGNGIKLIMEFL-PSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred CCCCceEEEEEcc-CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccc
Confidence 3 5678999999 8888877652 6788888999999999999999
Q ss_pred cccCCCCCee---eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc-cC----Cccccccchhh
Q 037624 289 MHLYCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL-SS----SSSSDQNIMLL 348 (408)
Q Consensus 289 ~~~~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~-~~----~~~~~~~~~~~ 348 (408)
+.+....... ....|+..| .++|||||||+++||+|++.|....... .. ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 8764322111 122333333 6899999999999999988764321100 00 00000000011
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+......+ ........+.+++..|++.+|++|++
T Consensus 237 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt 272 (284)
T cd05079 237 RVLEEGKRLP---RPPNCPEEVYQLMRKCWEFQPSKRTT 272 (284)
T ss_pred HHHHcCccCC---CCCCCCHHHHHHHHHHccCCcccCcC
Confidence 1111111110 01123456788999999999999954
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-23 Score=210.28 Aligned_cols=208 Identities=19% Similarity=0.285 Sum_probs=149.3
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
..+-++.....||.|.||.||-|.. .+|...|||.++..... ........+|+.++. .|+|+|+-+|. ....
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGV----EvHR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGV----EVHR 1306 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCce----eecH
Confidence 3444566778999999999999987 55888999999764433 445567788988885 77777776666 7788
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+..++.|||+ ++|+|.+.+. +|+.|++|+.++.+|.+|||.|..+.
T Consensus 1307 ekv~IFMEyC-~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1307 EKVYIFMEYC-EGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHHHHHh-ccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEec
Confidence 8899999999 9999987773 79999999999999999999998875
Q ss_pred CCCCe----eeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 293 CDSSN----LTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 293 ~~~~~----~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
..... .....||+.| .+.||||+|||++||+||++|+...+ .+..+.--+-.
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d---------ne~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD---------NEWAIMYHVAA 1456 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc---------chhHHHhHHhc
Confidence 54322 2456899999 57899999999999999999975321 11111111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCc-CCCcccccc
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTP-MQKPFHEIS 394 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R-m~~~~~~~~ 394 (408)
.-.++... .-...-.+..-.|++.||+.| |+..+.++.
T Consensus 1457 gh~Pq~P~---~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1457 GHKPQIPE---RLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred cCCCCCch---hhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 11111101 122223456678999999999 765444443
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=178.79 Aligned_cols=192 Identities=20% Similarity=0.247 Sum_probs=136.3
Q ss_pred ecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||.|+||.||+|+.. +++.||+|.+...........+.+.+|++++. +|+|++++++. +..+...++++||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~lv~e~~- 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRT----FKDKKYIYMLMEYC- 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeee----EEcCCccEEEEecC-
Confidence 699999999999985 48899999997544333344567899999886 78888888777 67778889999999
Q ss_pred cchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeeccc
Q 037624 257 EACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAG 303 (408)
Q Consensus 257 ~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~g 303 (408)
++++|.+++. +++.|++++.++.+||+|||+++...... ......|
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~ 154 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCG 154 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccC
Confidence 8888887762 56777788899999999999998765432 1122345
Q ss_pred CCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHH
Q 037624 304 TYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVS 371 (408)
Q Consensus 304 t~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 371 (408)
+..| .++|+||||+++|||++|+.|+..... ........+.+...... .+......+.
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 224 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-------DPMEIYNDILKGNGKLE---FPNYIDKAAK 224 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-------CHHHHHHHHhccCCCCC---CCcccCHHHH
Confidence 5555 679999999999999999999864321 01111222221111110 0111134577
Q ss_pred HHHHhhccCCCCCcCC
Q 037624 372 TILFACLRSNPKTPMQ 387 (408)
Q Consensus 372 ~l~~~C~~~~P~~Rm~ 387 (408)
+++..||+.+|++|.+
T Consensus 225 ~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 225 DLIKQLLRRNPEERLG 240 (262)
T ss_pred HHHHHHccCChhhCcC
Confidence 8889999999999933
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-21 Score=178.27 Aligned_cols=199 Identities=21% Similarity=0.239 Sum_probs=141.6
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|++|.||+|+..+ ++.||||++...... ...+.+.+|++.+. +|+|++++.++ +......
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~ 74 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGA----FYKEGEI 74 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEE----EccCCeE
Confidence 367888999999999999999864 889999998753221 34678999998886 78888877777 7777888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|..++. ++|.|++++.++.++|+|||++......
T Consensus 75 ~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 75 SIVLEYM-DGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred EEEEEec-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999 8777776652 4566777888999999999999876543
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
........|+..| .++||||||++++||+||+.|+...... ........+........
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~---- 223 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP------SFFELMQAICDGPPPSL---- 223 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc------CHHHHHHHHhcCCCCCC----
Confidence 3322233455555 5899999999999999999998644210 00111122222111110
Q ss_pred HHH-HHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVR-DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~-~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
... ....+.+++..|++.+|++|++
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~ 249 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPS 249 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCC
Confidence 111 3345778888999999999954
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=181.96 Aligned_cols=153 Identities=20% Similarity=0.220 Sum_probs=110.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc-
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA- 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~- 246 (408)
++|+..+.||+|+||.||+|... +++.||+|++.... ........+.+|+.++. .|+|++++.++ +....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~----~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDV----EHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeee----EeecCC
Confidence 46888899999999999999984 58899999986532 22223457888998886 46888888777 33322
Q ss_pred ----cchhhhhhcccchhhhhhh--------------------------------------ccCcccccccc-CCceEEe
Q 037624 247 ----CFWFMNTWRGEACSVFCTM--------------------------------------IMKPLSWIGLR-ELEAFVA 283 (408)
Q Consensus 247 ----~~~lv~e~~~~~g~l~~~l--------------------------------------~~k~~~~~l~~-~~~~ki~ 283 (408)
..++++||+ ++ ++..++ .++|.|++++. ++.+||+
T Consensus 76 ~~~~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 76 NGKPSLYLVFEYL-DS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CCCceEEEEeecc-Cc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe
Confidence 368899998 54 444332 16777888887 8999999
Q ss_pred ecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 284 DFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 284 DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|||+++.............+++.| .++|||||||+++||+||+.||..
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Confidence 999998653322111112223333 689999999999999999999854
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-22 Score=181.99 Aligned_cols=200 Identities=19% Similarity=0.202 Sum_probs=136.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||++... +++.||+|++..... ....+.+.+|++++. .|+|++++.+. +..+...
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGA----FYNNGDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhhee----eecCCEE
Confidence 35677788999999999999985 588999999875322 244567899998886 78888887777 6667888
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||+ ++++|.+++. +++.|+++++++.+||+|||.+.....
T Consensus 75 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 75 SICMEYM-DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EEEEEec-CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 8899988 7666665542 456677788889999999999876532
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.... ...|+..| .++||||||++++||+||+.|+........ .....+..+.+....... .
T Consensus 154 ~~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~ 226 (265)
T cd06605 154 SLAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD----GIFELLQYIVNEPPPRLP-S 226 (265)
T ss_pred HHhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc----cHHHHHHHHhcCCCCCCC-h
Confidence 2111 13344444 689999999999999999999864311000 000011122221111000 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..||..+|++|++
T Consensus 227 --~~~~~~~~~li~~~l~~~p~~Rpt 250 (265)
T cd06605 227 --GKFSPDFQDFVNLCLIKDPRERPS 250 (265)
T ss_pred --hhcCHHHHHHHHHHcCCCchhCcC
Confidence 013344678889999999999955
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=180.85 Aligned_cols=204 Identities=20% Similarity=0.191 Sum_probs=135.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||.|++|.||+|... +++.+|+|.+.... .......+.+|++++. +|+|++++++++. .......
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~~ 76 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFL--DESSSSI 76 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEE--ccCCCeE
Confidence 46788899999999999999984 57899999987532 2234567899999986 7888777776621 1233467
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ ++++|.+++. +++.|+++++++.++|+|||++...
T Consensus 77 ~lv~e~~-~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 77 GIAMEYC-EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEEEec-CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 8999999 8888765431 5667777888999999999998764
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC---CCCC
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD---PRLS 356 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d---~~l~ 356 (408)
..... ....++..| .++||||+||++|||+||+.|++....... ........+.+ +.+.
T Consensus 156 ~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 229 (287)
T cd06621 156 VNSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL----GPIELLSYIVNMPNPELK 229 (287)
T ss_pred ccccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC----ChHHHHHHHhcCCchhhc
Confidence 32211 112334344 589999999999999999999875422000 00000111111 1111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
... .........+.+++..||+.+|++|++
T Consensus 230 ~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt 259 (287)
T cd06621 230 DEP-GNGIKWSEEFKDFIKQCLEKDPTRRPT 259 (287)
T ss_pred cCC-CCCCchHHHHHHHHHHHcCCCcccCCC
Confidence 100 000112345778999999999999944
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=179.50 Aligned_cols=197 Identities=18% Similarity=0.225 Sum_probs=133.0
Q ss_pred hhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|...+.||+|+||.||+|...+ ...||||...... .....+.|.+|+.++. .|+|+++++++ +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~- 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGV----ITE- 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEE----EcC-
Confidence 357778999999999999998743 2468999886432 2334568999999886 78888777766 544
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. ++|.|++++.++.+|++|||+++..
T Consensus 79 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 79 NPVWIVMELA-PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred CCcEEEEEcC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 4466888998 8888877662 6788888888999999999999865
Q ss_pred CCCCCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 292 YCDSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 292 ~~~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
....... +...++..| .++|||||||+++|+++ |+.||........ ...+.........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~------~~~~~~~~~~~~~- 230 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV------IGRIENGERLPMP- 230 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHHcCCcCCCC-
Confidence 4332111 111122233 68999999999999996 9999864321100 0001000011111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
..+...+.+++..|+..+|++|++..
T Consensus 231 ------~~~~~~~~~li~~~l~~~P~~Rpt~~ 256 (270)
T cd05056 231 ------PNCPPTLYSLMTKCWAYDPSKRPRFT 256 (270)
T ss_pred ------CCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 12234577888999999999996543
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.7e-22 Score=182.03 Aligned_cols=189 Identities=19% Similarity=0.266 Sum_probs=126.5
Q ss_pred eeecccceeEEEEEEeCC-Cc--EEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhh
Q 037624 178 YCFGTGGYGSVYIAQLTS-SK--VIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~-g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+.||+|+||.||+|+..+ +. .+|+|.++.. ......+.|.+|++++. .|+|+++++++ +......+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~----~~~~~~~~lv 74 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGA----CEHRGYLYLA 74 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEE----EecCCCceEE
Confidence 368999999999999854 43 4688888642 12234567889999886 68888887777 7777788999
Q ss_pred hhhcccchhhhhhh-------------------------------------------------ccCccccccccCCceEE
Q 037624 252 NTWRGEACSVFCTM-------------------------------------------------IMKPLSWIGLRELEAFV 282 (408)
Q Consensus 252 ~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l~~~~~~ki 282 (408)
+||+ ++++|.+++ +++|.|+++++++.+|+
T Consensus 75 ~e~~-~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 75 IEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred EEeC-CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEE
Confidence 9998 777775543 16788888889999999
Q ss_pred eecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhh
Q 037624 283 ADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
+|||+++....... ......+..| .++|||||||+++||+| |+.||...... . ..+
T Consensus 154 ~dfgl~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---------~-~~~ 222 (270)
T cd05047 154 ADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---------E-LYE 222 (270)
T ss_pred CCCCCccccchhhh-ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---------H-HHH
Confidence 99999863221100 0011112223 68999999999999997 99998532110 0 111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+......+. .......+.+++..||+.+|.+|++
T Consensus 223 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps 257 (270)
T cd05047 223 KLPQGYRLEK---PLNCDDEVYDLMRQCWREKPYERPS 257 (270)
T ss_pred HHhCCCCCCC---CCcCCHHHHHHHHHHcccChhhCCC
Confidence 1111111100 0112345778999999999999944
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=178.64 Aligned_cols=190 Identities=21% Similarity=0.309 Sum_probs=133.8
Q ss_pred eeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 178 YCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|++.+. +|+|++++.++ +......+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGV----CTEEEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeee----ecCCCceEEE
Confidence 469999999999999854 7789999997643221 4678899999886 78888877777 6667888999
Q ss_pred hhhcccchhhhhhhc------------------------------------------cCccccccccCCceEEeeccccc
Q 037624 252 NTWRGEACSVFCTMI------------------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~------------------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
+||+ ++++|.+++. ++|.|+++++++.+||+|||.++
T Consensus 75 ~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 75 LEYM-EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred EEec-cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccc
Confidence 9998 7777765541 56777788889999999999998
Q ss_pred ccCCCCC--eeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC
Q 037624 290 HLYCDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 290 ~~~~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
....... ......++..| .++||||+||+++||++ |+.|+...... .....+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---------~~~~~~~~~~ 224 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---------EVLEYLRKGY 224 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---------HHHHHHHcCC
Confidence 7754321 11223345444 68999999999999999 69998643211 0111111111
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .........+.+++..|++.+|++|++
T Consensus 225 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps 253 (262)
T cd00192 225 RL----PKPEYCPDELYELMLSCWQLDPEDRPT 253 (262)
T ss_pred CC----CCCccCChHHHHHHHHHccCCcccCcC
Confidence 10 011122456778889999999999954
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=178.20 Aligned_cols=195 Identities=17% Similarity=0.260 Sum_probs=134.7
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++.. .+++.+|||.+..... .....+.+.+|++++. +|+|++++.+. ...+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYEN----FLEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeee----EecCCEEE
Confidence 467789999999999999987 4578899999875332 2334678999999986 67777777666 55667788
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccc-cCCceEEeecccccccCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYC 293 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~ 293 (408)
+++||+ ++++|.+++. ++|.|++++ ++..+|++|||+++....
T Consensus 76 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 76 IVMEYA-PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred EEEecC-CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 999999 8887776652 556666676 445689999999987643
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
... .....|+..| .++|||||||+++||+||+.|++.... ......+........
T Consensus 155 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--- 221 (256)
T cd08220 155 KSK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---------PALVLKIMSGTFAPI--- 221 (256)
T ss_pred Ccc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---------HHHHHHHHhcCCCCC---
Confidence 321 1223455555 689999999999999999999864321 011111111111100
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 222 -~~~~~~~l~~li~~~l~~~p~~Rpt 246 (256)
T cd08220 222 -SDRYSPDLRQLILSMLNLDPSKRPQ 246 (256)
T ss_pred -CCCcCHHHHHHHHHHccCChhhCCC
Confidence 0112334668889999999999943
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=182.83 Aligned_cols=151 Identities=19% Similarity=0.229 Sum_probs=112.8
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCC--CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENE--EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
|+..+.||+|+||.||+|... +|+.||||++...... .......+..|++++. +|+|+++++++ +......
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~ 77 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDV----FGHKSNI 77 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhe----eecCCEE
Confidence 667788999999999999974 5889999999754322 1223455778888886 88999888888 6667788
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ .++|.+++. +++.|++++.++.+||+|||+++.....
T Consensus 78 ~lv~e~~--~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 78 NLVFEFM--ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEEEccc--CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 8999998 456655542 6778888889999999999999876433
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
........++..| .++|||||||+++||++|..|+.
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~ 204 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLP 204 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcccc
Confidence 2211111222222 67999999999999999987765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-23 Score=178.13 Aligned_cols=202 Identities=18% Similarity=0.253 Sum_probs=143.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
+++|+..++||+|.|+.||++.. +.|+.+|+|.+..... .....+...+|+.+.. +|||++++... ..+...
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~-~~~~~e~l~rEarIC~~LqHP~IvrL~~t----i~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDS----IQEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhh-ccccHHHHHHHHHHHHhcCCCcEeehhhh----hcccce
Confidence 35677778899999999999987 6688899988865332 2235677888988876 99999998887 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccc---cCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL---RELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~---~~~~~ki~DfGla~~~ 291 (408)
.++|+|+| +++++..-+. +||.|.++. ..--+|++|||+|..+
T Consensus 85 ~ylvFe~m-~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 85 HYLVFDLV-TGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred eEEEEecc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 88999999 8887765441 688888876 3456899999999998
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
. +.......+||++| ..+|||+-||||+-|+.|+.||.... +......+......-+.
T Consensus 164 ~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~---------~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 164 N-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED---------QHRLYEQIKAGAYDYPS 233 (355)
T ss_pred C-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc---------HHHHHHHHhccccCCCC
Confidence 7 55556778999999 67899999999999999999986421 11111222222111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
++...-.....+++.+.+..||++|+++.
T Consensus 234 -~~w~~is~~Ak~LvrrML~~dP~kRIta~ 262 (355)
T KOG0033|consen 234 -PEWDTVTPEAKSLIRRMLTVNPKKRITAD 262 (355)
T ss_pred -cccCcCCHHHHHHHHHHhccChhhhccHH
Confidence 11111122233566778899999996543
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=180.63 Aligned_cols=199 Identities=20% Similarity=0.243 Sum_probs=125.6
Q ss_pred cccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD-- 245 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~-- 245 (408)
|...+.||+|+||.||+|.+. .++.||||++.... ......+++.+|++++. .|+|+++++++........
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 445678999999999999863 36789999987532 23334667899999886 7777777776521100000
Q ss_pred ccchhhhhhcccchhhhhhh---------------------------------------ccCccccccccCCceEEeecc
Q 037624 246 ACFWFMNTWRGEACSVFCTM---------------------------------------IMKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l---------------------------------------~~k~~~~~l~~~~~~ki~DfG 286 (408)
...+++++|+ ++|++..++ +++|.|+++++++.+|++|||
T Consensus 80 ~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 80 PIPMVILPFM-KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred cceEEEEecC-CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccc
Confidence 1224555666 555554332 167888889999999999999
Q ss_pred cccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhcc
Q 037624 287 MTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVL 351 (408)
Q Consensus 287 la~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 351 (408)
+++......... ....++..| .++|||||||++|||++ |+.|+...... .....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---------~~~~~~~ 229 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---------EIYNYLI 229 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---------HHHHHHH
Confidence 998654322111 111122222 68999999999999999 88887532110 0011111
Q ss_pred CC-CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 352 DP-RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 352 d~-~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.. .+..+ ......+.+++.+|++.+|++|++.
T Consensus 230 ~~~~~~~~-----~~~~~~~~~l~~~~l~~~p~~Rps~ 262 (273)
T cd05074 230 KGNRLKQP-----PDCLEDVYELMCQCWSPEPKCRPSF 262 (273)
T ss_pred cCCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCH
Confidence 11 11110 1223467889999999999999543
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=179.74 Aligned_cols=190 Identities=17% Similarity=0.191 Sum_probs=124.4
Q ss_pred eecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeeecCCccchhhh
Q 037624 179 CFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
.||+|+||.||++... +++.+|+|.+.............+.+|..++. .|++++.+... +...+..++++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~lv~ 76 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYA----FHTPDKLCFIL 76 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEE----EecCCeEEEEE
Confidence 4899999999999984 58899999987543222222333445544332 45565555554 55666788999
Q ss_pred hhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeee
Q 037624 253 TWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT 299 (408)
Q Consensus 253 e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~ 299 (408)
||+ ++++|..++. ++|.|+++++++.+|++|||++........ .
T Consensus 77 e~~-~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--~ 153 (279)
T cd05633 77 DLM-NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--H 153 (279)
T ss_pred ecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc--c
Confidence 999 8888876552 678888899999999999999875532211 1
Q ss_pred ecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHH
Q 037624 300 LLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366 (408)
Q Consensus 300 ~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 366 (408)
...||..| .++|||||||+++||+||+.||........ .... ......+..+.. ..
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~--~~~~~~~~~~~~-------~~ 222 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEID--RMTLTVNVELPD-------SF 222 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHH--HHhhcCCcCCcc-------cc
Confidence 22455554 578999999999999999999864321100 0000 000011122211 12
Q ss_pred HHHHHHHHHhhccCCCCCcC
Q 037624 367 IVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 367 ~~~~~~l~~~C~~~~P~~Rm 386 (408)
...+.+++..|++.+|++|+
T Consensus 223 ~~~~~~li~~~l~~~p~~R~ 242 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRL 242 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhc
Confidence 23456777899999999995
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=180.30 Aligned_cols=191 Identities=20% Similarity=0.234 Sum_probs=129.5
Q ss_pred ecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|+||+||+|.. .+|+.||+|.+...........+.+.+|++++. +|+|++++.+. +...+..++++||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~lv~e~~- 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYA----FETKDDLCLVMTLM- 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeE----EecCCeEEEEEecC-
Confidence 69999999999987 458899999986533222334556788998886 77777777766 56667788999999
Q ss_pred cchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCCCeeeec
Q 037624 257 EACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 257 ~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
++++|..++. +++.|+++++++.+||+|||+++...... .....
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~ 154 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-KIKGR 154 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-ccccc
Confidence 8887776552 56777788899999999999997654221 11222
Q ss_pred ccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh-ccCCCCCCccchhHHHHHH
Q 037624 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD-VLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 302 ~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~ 368 (408)
.|+..| .++|||||||+++||++|+.||........ .. .+.. +...... .......
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~-~~~~~~~~~~~~-----~~~~~~~ 223 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-----KE-ELKRRTLEMAVE-----YPDKFSP 223 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-----HH-HHHhcccccccc-----CCccCCH
Confidence 344444 589999999999999999999864321100 00 0111 1110000 0011123
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..||+.+|++|++
T Consensus 224 ~~~~li~~~l~~~p~~R~~ 242 (277)
T cd05577 224 EAKDLCEALLQKDPEKRLG 242 (277)
T ss_pred HHHHHHHHHccCChhHccC
Confidence 4567888999999999953
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-22 Score=180.00 Aligned_cols=191 Identities=17% Similarity=0.228 Sum_probs=134.2
Q ss_pred ecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|+||.||+++..+ |+.+|+|.+...........+.+.+|++++. +|+|++++.+. +..+...++++||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~----~~~~~~~~lv~e~~- 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYS----FQGKKNLYLVMEYL- 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHh----eecCcEEEEEEecC-
Confidence 6899999999999864 8899999987543333345667888988886 78888888777 66777888999999
Q ss_pred cchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC-------
Q 037624 257 EACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS------- 296 (408)
Q Consensus 257 ~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~------- 296 (408)
++++|..++. +++.|+++++++.+||+|||++........
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 7777766552 677788899999999999999876533211
Q ss_pred -eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 297 -NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 297 -~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......++..| .++||||||++++|++||+.||..... ......+.......+. .
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~---~ 223 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---------EEIFQNILNGKIEWPE---D 223 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHhcCCcCCCc---c
Confidence 11223455555 589999999999999999999863221 1111112211111110 0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..|++.+|++|++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt 247 (265)
T cd05579 224 VEVSDEAIDLISKLLVPDPEKRLG 247 (265)
T ss_pred ccCCHHHHHHHHHHhcCCHhhcCC
Confidence 001345678889999999999944
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-21 Score=187.92 Aligned_cols=147 Identities=19% Similarity=0.220 Sum_probs=111.1
Q ss_pred HhhcccceeecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
...|...+.||+|+||.||+|... .+..||||.+... +.+.+|++++. +|+|+++++++ +...
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~----~~~~ 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHA----YRWK 158 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeee----EeeC
Confidence 346889999999999999999763 3568999988642 34567888886 88888888776 4455
Q ss_pred ccchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
...+++++++ . +++..++ ++||.|++++.++.+||+|||+++...
T Consensus 159 ~~~~lv~e~~-~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 159 STVCMVMPKY-K-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred CEEEEEehhc-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 5666777766 2 3444333 178899999999999999999997664
Q ss_pred CCCCe--eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... .....||..| .++|||||||++|||++|+.||..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 33221 2245678777 689999999999999999999853
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-21 Score=180.69 Aligned_cols=150 Identities=19% Similarity=0.232 Sum_probs=112.4
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|+||.||+|+.. +|+.||+|++.... ........+.+|++++. +|+|++++.++ .......++
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~----~~~~~~~~l 76 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLYDV----LHSDKKLTL 76 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccc-ccccCccchhHHHHHHHhcCCCCeeeHHHH----hccCCceEE
Confidence 667789999999999999984 58899999987532 22233456788998886 78888887777 666777888
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||+ + +++..++. ++|.|++++.++.+||+|||+++.......
T Consensus 77 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 77 VFEYC-D-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred EEecC-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 99988 4 34444331 678888898999999999999986543322
Q ss_pred eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 297 NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 297 ~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
......++..| .++|||||||+++||+||+.|+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~ 201 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 201 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 22223344444 67999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-21 Score=194.07 Aligned_cols=158 Identities=19% Similarity=0.199 Sum_probs=107.2
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCC---cceeeeEe
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYD---IETLLSFM 238 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n---~~~l~~~~ 238 (408)
+++...+++|...+.||+|+||+||+|... .++.||||+++... ...+++..|++++. +|.+ +.+++.++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~ 197 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQ 197 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeE
Confidence 445556789999999999999999999974 57889999986421 12345566666654 3322 22233333
Q ss_pred EeeecCCccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCC------
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLREL------ 278 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~------ 278 (408)
+++.......++++++++ +++..++ ++||.|++++.++
T Consensus 198 ~~~~~~~~~~~iv~~~~g--~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 198 RYFQNETGHMCIVMPKYG--PCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred EEEEcCCceEEEEEeccC--CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccc
Confidence 433334445566666541 2222211 3788999987554
Q ss_pred ----------ceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 279 ----------EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 279 ----------~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.+||+|||.+..... ..+..+||..| .++|||||||++|||+||+.||+.
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred cccccCCCCceEEECCCCccccCcc---ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 599999998864321 22346788888 679999999999999999999964
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.4e-22 Score=180.75 Aligned_cols=190 Identities=19% Similarity=0.280 Sum_probs=128.4
Q ss_pred eeecccceeEEEEEEeCC-------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 178 YCFGTGGYGSVYIAQLTS-------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~-------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.||+|+||.||+|+..+ ++.+|+|.+.... .......|.+|++++. +|+|+++++++ +......
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 74 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGV----CLLNEPQ 74 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeee----ecCCCCe
Confidence 369999999999998743 2579999886422 1234567899999987 78888888877 7777788
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------------cCccccccccCC-----ceEEe
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLREL-----EAFVA 283 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~-----~~ki~ 283 (408)
++++||+ ++++|.+++. ++|.|++++.+. .+|++
T Consensus 75 ~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 75 YIIMELM-EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEEEecc-CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEEC
Confidence 8999999 8888776541 566777777666 89999
Q ss_pred ecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhh
Q 037624 284 DFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 284 DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
|||+++......... ....++..| .++|||||||+++||+| |+.|+...... ...
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~----------~~~ 223 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ----------EVL 223 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH----------HHH
Confidence 999997653221110 111223333 68999999999999998 99998632111 011
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..++..... .........+.+++..||+.+|++|++
T Consensus 224 ~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~ 259 (269)
T cd05044 224 QHVTAGGRL---QKPENCPDKIYQLMTNCWAQDPSERPT 259 (269)
T ss_pred HHHhcCCcc---CCcccchHHHHHHHHHHcCCCcccCCC
Confidence 111111110 001122345678899999999999943
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-23 Score=176.40 Aligned_cols=197 Identities=21% Similarity=0.250 Sum_probs=129.5
Q ss_pred cceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 176 IKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
....||.|+||+|+|-.+ +.|+..|||+++... .....+++..|.++..+..|.++++.||+. +..++..|+-||.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa-~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGA-LFSEGDCWICMEL 144 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhh-hhcCCceeeeHHH
Confidence 346699999999999988 569999999998643 334567888888876544444444444443 6677777888887
Q ss_pred cccchhhhhhh---------------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 255 RGEACSVFCTM---------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 255 ~~~~g~l~~~l---------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
|. -|+.... ++||.|++++..|.+|+||||++-.+...
T Consensus 145 Md--~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S- 221 (361)
T KOG1006|consen 145 MD--ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS- 221 (361)
T ss_pred Hh--hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-
Confidence 73 1221111 17999999999999999999998765321
Q ss_pred CeeeecccCC-------------CC-cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc--CCCCCCcc
Q 037624 296 SNLTLLAGTY-------------GY-EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL--DPRLSPPV 359 (408)
Q Consensus 296 ~~~~~~~gt~-------------~y-~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~ 359 (408)
-..+.-+|.. || -+|||||+|+.|+|+.||+-|+..... .-..+..++ ||.+...
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--------vfeql~~Vv~gdpp~l~~- 292 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--------VFEQLCQVVIGDPPILLF- 292 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--------HHHHHHHHHcCCCCeecC-
Confidence 1112233443 44 789999999999999999999864211 111233333 2222211
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+....+-...+...+-.|+-+|-.+|+.
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpk 320 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPK 320 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcc
Confidence 0111223445667777899999999943
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-21 Score=181.53 Aligned_cols=151 Identities=23% Similarity=0.266 Sum_probs=111.9
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|++|.||+|.. .+|+.||+|++.... ......+.+.+|++++. +|+|++++.++ +..+...++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~----~~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLET-EDEGVPSTAIREISLLKELNHPNIVRLLDV----VHSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccc-ccccchhHHHHHHHHHHhcCCCCccCHhhe----eccCCeEEE
Confidence 45568899999999999997 468999999987532 22233456888999886 88888888888 777788889
Q ss_pred hhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 251 MNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||+ + +++..++. ++|.|+++++++.+||+|||+++......
T Consensus 76 v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 76 VFEFL-D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred EEecc-C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 99987 4 35554431 56677778889999999999997653221
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.......++..| .++|||||||++|||+||+.||..
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 111111223222 679999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=183.92 Aligned_cols=157 Identities=21% Similarity=0.214 Sum_probs=111.9
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee--c
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC--I 243 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~--~ 243 (408)
...+.|...+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|++++. +|+|++++++++.... .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 4567888899999999999999987 467899999987532 12223456778999987 7888877776522110 1
Q ss_pred CCccchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
.....+++++++ ++++...+ ++||.|+++++++.+||+|||+++..
T Consensus 91 ~~~~~~~~~~~~--~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 91 NFNEVYLVTNLM--GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred ccCcEEEEeecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 112345555554 23333222 27899999999999999999999876
Q ss_pred CCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.... +...||..| .++|||||||+++||++|+.||..
T Consensus 169 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CCCc---CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 4322 223455555 579999999999999999999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-21 Score=178.51 Aligned_cols=188 Identities=16% Similarity=0.256 Sum_probs=129.1
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|.. +++.||+|.++.. ...+.|.+|+.++. +|+|++++.++ +..+ ..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~-~~~ 74 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD-----VTAQAFLEETAVMTKLHHKNLVRLLGV----ILHN-GLY 74 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc-----chHHHHHHHHHHHHhCCCCCcCeEEEE----EcCC-CcE
Confidence 4678889999999999999986 6778999998642 12467889999885 77777777666 4333 357
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++|..++. ++|.|++++.++.+||+|||+++.....
T Consensus 75 ~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 75 IVMELM-SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EEEECC-CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 889998 8888776652 6788888888999999999998764321
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
... ...+..| .++|||||||+++||++ |+.|+...... ...+.+......+.
T Consensus 154 ~~~---~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----------~~~~~~~~~~~~~~-- 218 (254)
T cd05083 154 VDN---SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK----------EVKECVEKGYRMEP-- 218 (254)
T ss_pred CCC---CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH----------HHHHHHhCCCCCCC--
Confidence 111 1111122 68999999999999998 99998643210 01111111111110
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.+|++|++
T Consensus 219 -~~~~~~~~~~li~~~l~~~p~~Rp~ 243 (254)
T cd05083 219 -PEGCPADVYVLMTSCWETEPKKRPS 243 (254)
T ss_pred -CCcCCHHHHHHHHHHcCCChhhCcC
Confidence 0122345678889999999999943
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-21 Score=180.23 Aligned_cols=144 Identities=21% Similarity=0.302 Sum_probs=102.7
Q ss_pred eeecccceeEEEEEEeCC---CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhh
Q 037624 178 YCFGTGGYGSVYIAQLTS---SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~---g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
..||+|+||.||+|+..+ +..||+|.+.... ....+.+|++++. +|+|++++.+++. ...+...++++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFL--SHSDRKVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEe--ccCCCeEEEEE
Confidence 579999999999999753 5689999986422 2346788999986 7777777766621 13345567788
Q ss_pred hhcccchhhhhhh------------------------------------------ccCcccccc----ccCCceEEeecc
Q 037624 253 TWRGEACSVFCTM------------------------------------------IMKPLSWIG----LRELEAFVADFG 286 (408)
Q Consensus 253 e~~~~~g~l~~~l------------------------------------------~~k~~~~~l----~~~~~~ki~DfG 286 (408)
||+ ++ ++...+ ++||.|+++ .+++++||+|||
T Consensus 80 e~~-~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 80 DYA-EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eee-CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 886 32 221111 178888888 466799999999
Q ss_pred cccccCCCCC---eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 287 MTMHLYCDSS---NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 287 la~~~~~~~~---~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
+++....... ......||..| .++|||||||+++||+||+.||.
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 9987643221 11234566666 57999999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-21 Score=179.07 Aligned_cols=197 Identities=19% Similarity=0.217 Sum_probs=127.6
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+|...+.||+|+||.||++... +++.||+|++..... ......+.+|+.++. .|+|+++++++ +..+...
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~----~~~~~~~ 78 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGA----LFREGDC 78 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeE----EecCCcE
Confidence 5556678999999999999974 588999999875322 234567889998876 37777777776 4455555
Q ss_pred hhhhhhcccc-hhhhh------------------------------------hhccCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEA-CSVFC------------------------------------TMIMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~-g~l~~------------------------------------~l~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+... .++.. |-+++|.|++++.++.+||+|||+++..
T Consensus 79 ~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 79 WICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 6666665210 11110 1126788888989999999999999765
Q ss_pred CCCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc---CC
Q 037624 292 YCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL---DP 353 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---d~ 353 (408)
..... .....||..| .++|||||||+++||+||+.||...... ...+.++. .+
T Consensus 159 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 229 (288)
T cd06616 159 VDSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV--------FDQLTQVVKGDPP 229 (288)
T ss_pred ccCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH--------HHHHhhhcCCCCC
Confidence 33211 1112333333 5799999999999999999998643210 00111111 12
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+... ........+.+++..|++.+|++|++
T Consensus 230 ~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt 260 (288)
T cd06616 230 ILSNS---EEREFSPSFVNFINLCLIKDESKRPK 260 (288)
T ss_pred cCCCc---CCCccCHHHHHHHHHHccCChhhCcC
Confidence 22211 11123445778889999999999944
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-21 Score=179.47 Aligned_cols=153 Identities=21% Similarity=0.261 Sum_probs=112.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|++|.||+|... +|+.||+|++.... ......+.+.+|++++. +|+|++++.++ +..+...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDV----VHSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcc-ccccchHHHHHHHHHHHhccCCCEeeEEEE----EecCCeE
Confidence 46888899999999999999984 68899999986532 22233467888999886 78888777777 6677788
Q ss_pred hhhhhhcccchhhhhhh-----------------------------------ccCccccccc-cCCceEEeecccccccC
Q 037624 249 WFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGL-RELEAFVADFGMTMHLY 292 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~-~~~~~ki~DfGla~~~~ 292 (408)
++++||+ +. ++..++ .++|.|++++ ++..+||+|||+++...
T Consensus 77 ~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 77 YLVFEYL-DL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred EEEEecc-cc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 8999998 43 443332 1677888887 45679999999997653
Q ss_pred CCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......+...|+..| .++|||||||+++||+||+.||..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 155 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred CCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 222111222233333 689999999999999999999853
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=178.06 Aligned_cols=145 Identities=20% Similarity=0.295 Sum_probs=102.9
Q ss_pred ceeecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 177 KYCFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
.+.||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++. +|+|++++.+.+. ...+...+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFL--SHADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEe--cCCCcEEEEE
Confidence 357999999999999864 46789999986422 2345778999986 7888777766521 1233456677
Q ss_pred hhhcccchhhhhhh------------------------------------------ccCcccccc----ccCCceEEeec
Q 037624 252 NTWRGEACSVFCTM------------------------------------------IMKPLSWIG----LRELEAFVADF 285 (408)
Q Consensus 252 ~e~~~~~g~l~~~l------------------------------------------~~k~~~~~l----~~~~~~ki~Df 285 (408)
+||+ ++ ++..++ ++||.|+++ ..++.+||+||
T Consensus 79 ~e~~-~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 79 FDYA-EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred Eecc-CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 7776 22 221111 278899988 35679999999
Q ss_pred ccccccCCCCC---eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 286 GMTMHLYCDSS---NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 286 Gla~~~~~~~~---~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
|+++....... ......||..| .++||||+||+++||+||+.||.
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 99987643221 12334566666 57999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-21 Score=178.72 Aligned_cols=198 Identities=18% Similarity=0.276 Sum_probs=141.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-cCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-KYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||.||+|+.. +|+.||+|.+...........+.+.+|.+++. . |+|++++.++ +..+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~----~~~~~~ 76 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT----FQDEEN 76 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHH----hcCCce
Confidence 36788899999999999999985 68899999987533323334567888888886 4 8888888777 677778
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++|++ ++++|.+++. +++.|+++..++.++++|||++......
T Consensus 77 ~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 77 LYFVLEYA-PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EEEEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 88999999 8888876662 5677888888999999999999865432
Q ss_pred CC--------------------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccc
Q 037624 295 SS--------------------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD 342 (408)
Q Consensus 295 ~~--------------------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~ 342 (408)
.. ......|+..| .++||||||++++|+++|+.|+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------- 227 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-------- 227 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--------
Confidence 21 11223455555 579999999999999999999864321
Q ss_pred ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 343 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
......+.+.....+ ......+.+++..|++.+|++|++.
T Consensus 228 -~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 228 -YLTFQKILKLEYSFP-----PNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred -HHHHHHHHhcCCCCC-----CccCHHHHHHHHHHhcCCHhhCCCc
Confidence 111122222111111 1113456788899999999999554
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-21 Score=184.66 Aligned_cols=202 Identities=16% Similarity=0.209 Sum_probs=135.7
Q ss_pred hhcccceeecccceeEEEEEEeC--------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT--------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
..|...+.||+|+||.||+|+.. .+..||+|.++.. ......+++.+|++++. +|+|+++++++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~--- 86 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGA--- 86 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE---
Confidence 35778899999999999999752 1236899988642 22234568899999885 68888888777
Q ss_pred eecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLS 271 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~ 271 (408)
+..+...++++||+ ++|+|.+++ +++|.|
T Consensus 87 -~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 164 (334)
T cd05100 87 -CTQDGPLYVLVEYA-SKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN 164 (334)
T ss_pred -EccCCceEEEEecC-CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence 77777888999998 777776543 157788
Q ss_pred cccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCccccccc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLS 336 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~ 336 (408)
+++++++.+||+|||+++......... ....++..| .++|||||||+++||++ |+.|+......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 243 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 243 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 888889999999999998654321111 111222233 68999999999999999 88887532111
Q ss_pred CCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
.....+.+. ...+ ........+.+++..||+.+|++| |.+.+..+
T Consensus 244 --------~~~~~~~~~-~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 244 --------ELFKLLKEG-HRMD---KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred --------HHHHHHHcC-CCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 011111111 1110 011223457788999999999999 44444443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-21 Score=179.45 Aligned_cols=194 Identities=18% Similarity=0.209 Sum_probs=131.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||.||+|+.. +++.||+|.+...........+++.+|++++. +|+|++++.++ +......
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 90 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC----YLREHTA 90 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEE----EEcCCee
Confidence 34666788999999999999974 57889999986432223334567888999886 78888888777 6667788
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ . |++...+ .++|.|++++.++.+||+|||++......
T Consensus 91 ~lv~e~~-~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 91 WLVMEYC-L-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEEEcc-C-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 8899987 4 3443332 16778888888999999999998865432
Q ss_pred CCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 295 SSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 295 ~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
. ...|+..| .++|||||||+++||+||+.|+...... .....+........
T Consensus 169 ~----~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---------~~~~~~~~~~~~~~- 234 (308)
T cd06634 169 N----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---------SALYHIAQNESPAL- 234 (308)
T ss_pred c----cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH---------HHHHHHhhcCCCCc-
Confidence 1 12233333 5899999999999999999997532110 00111111111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..||+.+|++|++
T Consensus 235 --~~~~~~~~~~~li~~cl~~~P~~Rp~ 260 (308)
T cd06634 235 --QSGHWSEYFRNFVDSCLQKIPQDRPT 260 (308)
T ss_pred --CcccccHHHHHHHHHHhhCCcccCCC
Confidence 00122344668889999999999944
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-21 Score=179.89 Aligned_cols=191 Identities=21% Similarity=0.288 Sum_probs=133.5
Q ss_pred eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
..||+|+||.||++.. .+++.||||++... .......+.+|+.++. +|+|++++.++ +..++..++++||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNS----YLVGDELWVVMEF 98 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeE----EEeCCEEEEEEec
Confidence 5699999999999988 46889999998542 2234567889998886 77888877777 6667788999999
Q ss_pred cccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCCeeeecc
Q 037624 255 RGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLA 302 (408)
Q Consensus 255 ~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~ 302 (408)
+ +++++..++. ++|.|++++++++++|+|||++..............
T Consensus 99 ~-~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 177 (292)
T cd06657 99 L-EGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 177 (292)
T ss_pred C-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccc
Confidence 9 8887776542 677888888999999999999876543322223345
Q ss_pred cCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHH
Q 037624 303 GTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLV 370 (408)
Q Consensus 303 gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 370 (408)
|+.+| .++|||||||+++||++|+.|+........ ...+.....+.+.. .......+
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~l 246 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNLPPKLKN-----LHKVSPSL 246 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhhCCcccCC-----cccCCHHH
Confidence 66666 589999999999999999999853211100 00011111111111 01122345
Q ss_pred HHHHHhhccCCCCCcCC
Q 037624 371 STILFACLRSNPKTPMQ 387 (408)
Q Consensus 371 ~~l~~~C~~~~P~~Rm~ 387 (408)
.+++..|++.+|.+|++
T Consensus 247 ~~li~~~l~~~P~~R~~ 263 (292)
T cd06657 247 KGFLDRLLVRDPAQRAT 263 (292)
T ss_pred HHHHHHHHhCCcccCcC
Confidence 67788999999999943
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.5e-22 Score=191.16 Aligned_cols=150 Identities=22% Similarity=0.296 Sum_probs=118.7
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC------
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK------ 244 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~------ 244 (408)
|...+.||+|+||.||+|+. ..|+.||||.+.... .....+...+|+++|. .|+|+|++.+. ..+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~i----ee~~~~~~~ 88 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDI----EETKFLGLV 88 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhccc----CCccccCcc
Confidence 34457799999999999996 569999999998644 3345678899999995 55555555444 222
Q ss_pred Cccchhhhhhcccchhhhhhhc------------------------------------cCccccccc--cCC--ceEEee
Q 037624 245 DACFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIGL--REL--EAFVAD 284 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~--~~~--~~ki~D 284 (408)
....++++||+ .+|+|...+. +||.|+++. +++ -.||+|
T Consensus 89 ~~~~vlvmEyC-~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 89 TRLPVLVMEYC-SGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred cccceEEEeec-CCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeec
Confidence 24567899999 9999999884 788888865 333 469999
Q ss_pred cccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 285 FGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 285 fGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
||.||.++.++ ..+.++||..| ..+|-|||||++||.+||..||-.
T Consensus 168 fG~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 168 FGAARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99999986554 67788999988 468999999999999999999853
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-21 Score=177.39 Aligned_cols=151 Identities=19% Similarity=0.266 Sum_probs=113.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ......+.+|++++. +|+|++++.++ +...+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDV----IHTENKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeee----EeeCCcEE
Confidence 4778899999999999999985 588999999875322 223456778998886 88888888777 67777788
Q ss_pred hhhhhcccchhhhhhhc------------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 250 FMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
+++||+ ++ ++..++. ++|.|+++++++.+|++|||+++....
T Consensus 75 lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 75 LVFEYM-DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI 152 (284)
T ss_pred EEEecC-Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence 999998 53 4544321 577788888999999999999976533
Q ss_pred CCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.........+|..| .++|||||||+++||+||+.|+..
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 203 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPG 203 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22111222333333 689999999999999999999864
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-21 Score=178.15 Aligned_cols=196 Identities=16% Similarity=0.227 Sum_probs=125.9
Q ss_pred eecccceeEEEEEEeCCCc---EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 179 CFGTGGYGSVYIAQLTSSK---VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~~g~---~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.||+|+||.||+|...++. .+++|.+.... .....+.|.+|+.++. +|+|++++++. +......++++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~----~~~~~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQ----CVEAIPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEE----ecCCCccEEEEe
Confidence 5999999999999864433 45677665422 1234568999988876 89999988888 778888899999
Q ss_pred hcccchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 254 WRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 254 ~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
|+ ++|+|..++. ++|.|++++.++.+||+|||++........
T Consensus 76 ~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 76 YC-ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred cC-CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 99 8888876541 678888888999999999999864321110
Q ss_pred --eeeecccCCCC-------------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC
Q 037624 297 --NLTLLAGTYGY-------------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 297 --~~~~~~gt~~y-------------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
......|+..| .++|||||||++|||++ |+.|+............. ........++.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI-KDQQVKLFKPQ 233 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hhcccccCCCc
Confidence 00112233222 57999999999999997 566775322111000000 00112233344
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcc
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPF 390 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~ 390 (408)
+..+. ...+.++...|| .+|++| |.+++
T Consensus 234 ~~~~~-------~~~~~~l~~~c~-~~P~~Rp~~~~i~ 263 (268)
T cd05086 234 LELPY-------SERWYEVLQFCW-LSPEKRATAEEVH 263 (268)
T ss_pred cCCCC-------cHHHHHHHHHHh-hCcccCCCHHHHH
Confidence 33211 123455667899 579999 44443
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-21 Score=181.51 Aligned_cols=214 Identities=19% Similarity=0.271 Sum_probs=141.2
Q ss_pred hcccceeecccceeEEEEEEe----CCCcEEEEEecccccCC-CcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL----TSSKVIALKKLHHWENE-EPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
+|+..+.||+|+||.||+++. .+++.||||.++..... .....+.+.+|++++. .|+|++++.+. ...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~----~~~ 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA----FQT 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhhee----eec
Confidence 366778999999999999985 35778999998743211 1233456888999886 47777777766 556
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+...++++||+ ++++|..++. ++|.|++++.++.++|+|||+++..
T Consensus 77 ~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 77 DTKLHLILDYV-NGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred CCEEEEEEecC-CCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 66778999999 7887776552 5677888888999999999998865
Q ss_pred CCCCCe-eeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC--CC
Q 037624 292 YCDSSN-LTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD--PR 354 (408)
Q Consensus 292 ~~~~~~-~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d--~~ 354 (408)
...... .....|+..| .++||||||++++||+||+.|+........ .......+.. +.
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~ 230 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS-----QSEISRRILKSKPP 230 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch-----HHHHHHHHHccCCC
Confidence 433211 1223455444 579999999999999999999853211110 0000111111 11
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC--CcccccchHHHhhhcc
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ--KPFHEISISELRNQEM 403 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~--~~~~~~~~~~~~~~~~ 403 (408)
... .....+.+++..|++.+|++|++ .+...+....++.-+|
T Consensus 231 ~~~-------~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 231 FPK-------TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred CCc-------ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 111 11234567888999999999954 3333455455544444
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-21 Score=184.24 Aligned_cols=162 Identities=20% Similarity=0.243 Sum_probs=112.7
Q ss_pred HHHHHHHH----hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeee
Q 037624 164 FGDIIEAT----EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLS 236 (408)
Q Consensus 164 ~~~l~~at----~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~ 236 (408)
.+|+.+++ ++|...+.||+|+||.||+|+. .+|+.||||++..... .......+.+|++++. +|+|++++.+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~ 81 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLD 81 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhh
Confidence 34454443 7888899999999999999997 4688999999875321 2233456889999886 7888888777
Q ss_pred EeEeee--cCCccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEe
Q 037624 237 FMDFVC--IKDACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVA 283 (408)
Q Consensus 237 ~~~~~~--~~~~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~ 283 (408)
++.... ......+++++|+ .. ++..+. +++|.|++++.++.+||+
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~ 159 (342)
T cd07879 82 VFTSAVSGDEFQDFYLVMPYM-QT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKIL 159 (342)
T ss_pred eecccccCCCCceEEEEeccc-cc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence 632110 0112346677766 22 222211 278889999999999999
Q ss_pred ecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 284 DFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 284 DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|||+++....... ...||..| .++|||||||+++||++|+.||..
T Consensus 160 dfg~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 160 DFGLARHADAEMT---GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred eCCCCcCCCCCCC---CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999986532211 11223322 689999999999999999999864
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-21 Score=179.18 Aligned_cols=185 Identities=15% Similarity=0.195 Sum_probs=122.6
Q ss_pred eecccceeEEEEEEeCC-------------------------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCc
Q 037624 179 CFGTGGYGSVYIAQLTS-------------------------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDI 231 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~~-------------------------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~ 231 (408)
.||+|+||.||+|++.. ...||+|.+.... ......|.+|+.++. +|+|+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 59999999999998521 1358999986422 223467888888886 88999
Q ss_pred ceeeeEeEeeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccC
Q 037624 232 ETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRE 277 (408)
Q Consensus 232 ~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~ 277 (408)
++++++ |..+...++|+||+ ++++|..++. ++|.|++++++
T Consensus 79 v~~~~~----~~~~~~~~lv~ey~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGV----CVRGSENIMVEEFV-EHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEE----EEeCCceEEEEecC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence 888888 88888889999999 8888876652 67788887643
Q ss_pred C-------ceEEeecccccccCCCCCee--------eecccCCCC-cccchhhhhHHHHHHH-hCCCCCcccccccCCcc
Q 037624 278 L-------EAFVADFGMTMHLYCDSSNL--------TLLAGTYGY-EKCDVYSFGVVALEIL-MGRQPGELLSSLSSSSS 340 (408)
Q Consensus 278 ~-------~~ki~DfGla~~~~~~~~~~--------~~~~gt~~y-~k~DVySfGvvl~Ell-tg~~p~~~~~~~~~~~~ 340 (408)
+ .+|++|||+++......... ....+...| .++|||||||++|||+ +|+.|+......
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----- 228 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS----- 228 (274)
T ss_pred CcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH-----
Confidence 3 47999999886442211110 001111112 6899999999999994 799988632110
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
......+.....+. . ....+.+++..||+.+|++|+
T Consensus 229 -----~~~~~~~~~~~~~~-~----~~~~~~~li~~cl~~~p~~Rp 264 (274)
T cd05076 229 -----EKERFYEKKHRLPE-P----SCKELATLISQCLTYEPTQRP 264 (274)
T ss_pred -----HHHHHHHhccCCCC-C----CChHHHHHHHHHcccChhhCc
Confidence 01111111111110 0 112467888999999999994
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-21 Score=179.78 Aligned_cols=153 Identities=20% Similarity=0.241 Sum_probs=113.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--c
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--A 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~ 246 (408)
++|+..+.||+|+||.||+|... +++.+|+|.++..... ......+.+|+.++. +|+|++++.++ +... .
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~----~~~~~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEV----VVGSNLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEE----EEecCCC
Confidence 57888899999999999999985 5889999999754322 223446778888876 78888887776 4444 7
Q ss_pred cchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 247 CFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
..++++||+ +. ++...+. ++|.|+++++++.+||+|||+++...
T Consensus 80 ~~~lv~e~~-~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 80 KIYMVMEYV-EH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred cEEEEehhc-Cc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 788999998 43 4443331 67888889999999999999998765
Q ss_pred CCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..........++..| .++|+|||||+++||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 432222222333333 679999999999999999999863
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.1e-21 Score=174.36 Aligned_cols=201 Identities=19% Similarity=0.302 Sum_probs=137.5
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCC---cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEE---PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~---~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
+|+..+.||+|+||.||+|.. .+++.||+|.+....... ....+.+.+|++++. +|+|+++++++ +....
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~ 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGA----TCEDS 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhce----eccCC
Confidence 467778999999999999986 568899999987533211 123567899999986 78888888777 77777
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC-ceEEeecccccccC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL-EAFVADFGMTMHLY 292 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~-~~ki~DfGla~~~~ 292 (408)
..++++||+ ++++|.+++. +++.|++++.++ .+||+|||++....
T Consensus 77 ~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 77 HFNLFVEWM-AGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred eEEEEEecc-CCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 888999999 8888877662 566677776554 69999999997764
Q ss_pred CCCCe----eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 293 CDSSN----LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 293 ~~~~~----~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
..... .....||..| .++||||+||+++||++|+.|+........ .....++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~ 229 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH------LALIFKIASATTA 229 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch------HHHHHHHhccCCC
Confidence 32111 1123455555 679999999999999999999853221110 0111111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+ .........+.+++..|++.+|++|++
T Consensus 230 ~---~~~~~~~~~~~~~i~~~l~~~p~~R~~ 257 (268)
T cd06630 230 P---SIPEHLSPGLRDVTLRCLELQPEDRPP 257 (268)
T ss_pred C---CCchhhCHHHHHHHHHHcCCCcccCcC
Confidence 1 111122345667889999999999954
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.9e-21 Score=186.93 Aligned_cols=143 Identities=17% Similarity=0.162 Sum_probs=109.9
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.+|...+.||+|+||.||+|.... ++.||||... ...+.+|++++. +|+|+++++++ +..+...
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~----~~~~~~~ 235 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDV----RVVGGLT 235 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEE----EEECCEE
Confidence 368888999999999999999854 7889999643 234678999887 88888888877 5666666
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++++++ . +++..++ ++|+.|++++.++.+||+|||+++.....
T Consensus 236 ~lv~e~~-~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 236 CLVLPKY-R-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEEEcc-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 7777766 2 3444333 17899999999999999999999876432
Q ss_pred CCe--eeecccCCCC------------cccchhhhhHHHHHHHhCCCCC
Q 037624 295 SSN--LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPG 329 (408)
Q Consensus 295 ~~~--~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~ 329 (408)
... .....||..| .++|||||||++|||++|..|+
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 211 2345688888 6899999999999999988764
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.8e-21 Score=172.53 Aligned_cols=191 Identities=19% Similarity=0.267 Sum_probs=136.7
Q ss_pred ecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|+||.||++... +++.+|+|.+.............+.+|++++. +|+|+++++.. +..+...++++||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~~v~e~~- 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYA----FQTEEKLYLVLEYA- 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHH----eecCCeeEEEEecC-
Confidence 699999999999985 48899999987644333334567888998886 88888888877 67778889999999
Q ss_pred cchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeeccc
Q 037624 257 EACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAG 303 (408)
Q Consensus 257 ~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~g 303 (408)
++++|.+++. ++|.|++++.++.++|+|||++..............|
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG 155 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence 7788876652 6777888889999999999999876443222223345
Q ss_pred CCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHH
Q 037624 304 TYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVS 371 (408)
Q Consensus 304 t~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 371 (408)
+..| .++|+||||++++|+++|+.||..... ......+.......+ . .....+.
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~--~---~~~~~l~ 221 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---------KEIYEKILKDPLRFP--E---FLSPEAR 221 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHhcCCCCCC--C---CCCHHHH
Confidence 5555 579999999999999999999863321 111122222222111 1 1134456
Q ss_pred HHHHhhccCCCCCcCCCc
Q 037624 372 TILFACLRSNPKTPMQKP 389 (408)
Q Consensus 372 ~l~~~C~~~~P~~Rm~~~ 389 (408)
+++..||..+|++|++..
T Consensus 222 ~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 222 DLISGLLQKDPTKRLGSG 239 (250)
T ss_pred HHHHHHhcCCHhhCCCcc
Confidence 788999999999996553
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-21 Score=174.47 Aligned_cols=193 Identities=21% Similarity=0.299 Sum_probs=132.1
Q ss_pred ccceeecccceeEEEEEEeCC-----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 175 DIKYCFGTGGYGSVYIAQLTS-----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~~-----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
+..+.||+|+||.||+|+..+ +..||+|.+..... ....+.+..|++++. .|+|+++++++ +.....
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~ 75 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGV----CTEEEP 75 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEE----EcCCCe
Confidence 456789999999999999854 37899999965321 224678899999886 77777777766 666678
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.++++||+ +++++.+++. ++|.|+++++++.++++|||+++...
T Consensus 76 ~~~i~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 76 LMIVMEYM-EGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eEEEEecc-CCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 88899988 7777765542 57778888889999999999998764
Q ss_pred CCCCeee-ecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 293 CDSSNLT-LLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 293 ~~~~~~~-~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
....... ...++..| .++||||+||+++||++ |+.|+..... ......+.......
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---------~~~~~~~~~~~~~~- 224 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---------EEVLEYLKKGYRLP- 224 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHhcCCCCC-
Confidence 3321111 11234444 68999999999999999 7888753211 10011111111110
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..|+..+|++|++
T Consensus 225 ---~~~~~~~~~~~~i~~~l~~~p~~Rpt 250 (258)
T smart00219 225 ---KPENCPPEIYKLMLQCWAEDPEDRPT 250 (258)
T ss_pred ---CCCcCCHHHHHHHHHHCcCChhhCcC
Confidence 00113445778889999999999954
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.6e-21 Score=175.15 Aligned_cols=188 Identities=15% Similarity=0.173 Sum_probs=124.6
Q ss_pred eeecccceeEEEEEEeCC-------------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 178 YCFGTGGYGSVYIAQLTS-------------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~-------------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
+.||+|+||.||+|++.+ ...||+|.+.... ......|..|+.++. +|+|+++++++ +
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~----~ 73 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGV----C 73 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEE----E
Confidence 358999999999998632 2258899876422 223457888888876 78888888887 7
Q ss_pred cCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCc-------eE
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELE-------AF 281 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~-------~k 281 (408)
..+...++++||+ +++++..++. ++|.|++++.++. +|
T Consensus 74 ~~~~~~~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 74 VRDVENIMVEEFV-EFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred ecCCCCEEEEecc-cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeE
Confidence 7778888999999 7777665442 6788888875543 89
Q ss_pred EeecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHH-hCCCCCcccccccCCccccccchh
Q 037624 282 VADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEIL-MGRQPGELLSSLSSSSSSDQNIML 347 (408)
Q Consensus 282 i~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Ell-tg~~p~~~~~~~~~~~~~~~~~~~ 347 (408)
++|||++....... ...|+..| .++|||||||++|||+ +|+.|+...... . .
T Consensus 153 l~d~g~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~---~ 218 (262)
T cd05077 153 LSDPGIPITVLSRQ----ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-------E---K 218 (262)
T ss_pred eCCCCCCccccCcc----cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-------H---H
Confidence 99999987653221 11233333 5799999999999998 588887532110 0 0
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
........... ......+.+++..||+.||++| +.+.+..
T Consensus 219 ~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 219 ERFYEGQCMLV-----TPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHhcCccCC-----CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 01111111100 0112346788899999999999 5454433
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-21 Score=183.69 Aligned_cols=158 Identities=16% Similarity=0.166 Sum_probs=112.3
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-cCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC-IKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~-~~~~ 246 (408)
.+.|...+.||+|+||+||+|+. .+++.||||.+.... ........+.+|+.++. +|+|++++.++..... ....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 35688889999999999999997 458899999987532 22233456778998886 7788777776522110 1113
Q ss_pred cchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++++||+ . +++..++ .++|.|++++.++.+||+|||+++....
T Consensus 83 ~~~lv~e~~-~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 83 DVYIVYELM-D-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred cEEEEEeCC-C-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 467888887 3 3444333 1678888899999999999999987643
Q ss_pred CCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.........||..| .++|||||||+++||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence 32222223344444 689999999999999999999854
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-21 Score=177.20 Aligned_cols=196 Identities=19% Similarity=0.303 Sum_probs=133.6
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|+....||+|+||.||+|+.. +.+.||+|.+.... .....+.|.+|++++. +|+|+++++++ +.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGL----CR 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEE----EC
Confidence 56888899999999999999963 24579999886422 2224567999999987 78888887777 77
Q ss_pred CCccchhhhhhcccchhhhhhhc------------------------------------------cCccccccccCCceE
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI------------------------------------------MKPLSWIGLRELEAF 281 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~------------------------------------------~k~~~~~l~~~~~~k 281 (408)
.....++++||+ +.++|.+++. ++|.|++++.++.+|
T Consensus 79 ~~~~~~lv~e~~-~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 79 EAEPHYMILEYT-DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred CCCcceEEEEec-CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEE
Confidence 777889999999 8888876541 677788888899999
Q ss_pred EeecccccccCCCCC-eeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchh
Q 037624 282 VADFGMTMHLYCDSS-NLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIML 347 (408)
Q Consensus 282 i~DfGla~~~~~~~~-~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 347 (408)
++|||+++....... ......++..| .++|||||||+++||++ |..||..... ....
T Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---------~~~~ 228 (275)
T cd05046 158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---------EEVL 228 (275)
T ss_pred EcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---------HHHH
Confidence 999999875432111 01111222222 67999999999999999 7888753211 0111
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.......+..+. .......+.+++..|++.+|++|+
T Consensus 229 ~~~~~~~~~~~~---~~~~~~~l~~~i~~~l~~~p~~Rp 264 (275)
T cd05046 229 NRLQAGKLELPV---PEGCPSRLYKLMTRCWAVNPKDRP 264 (275)
T ss_pred HHHHcCCcCCCC---CCCCCHHHHHHHHHHcCCCcccCC
Confidence 111111111100 012234577899999999999993
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.8e-21 Score=173.02 Aligned_cols=198 Identities=19% Similarity=0.242 Sum_probs=138.0
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--cc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--AC 247 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~~ 247 (408)
+|...+.||+|++|.||+|... +++.|++|++..... .....+.+.+|++++. .|+|++++.+. +... ..
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGS----ERDEEKNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEE----EecCCCCe
Confidence 3667789999999999999986 688999999875332 1234678899999886 67777776666 5555 77
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++++|.+++. ++|.|+++++++.+||+|||.+......
T Consensus 76 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 76 LNIFLEYV-SGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EEEEEEec-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 88999999 7888777652 5667777888999999999999876544
Q ss_pred CC--eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SS--NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~--~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.. ......++..| .++||||||++++||++|+.|+...... ......+.......
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~--- 223 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP--------MAALYKIGSSGEPP--- 223 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--------HHHHHhccccCCCc---
Confidence 32 11223444444 6899999999999999999998643210 00111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+......+.+++.+|++.+|++|++
T Consensus 224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~ 250 (260)
T cd06606 224 EIPEHLSEEAKDFLRKCLRRDPKKRPT 250 (260)
T ss_pred CCCcccCHHHHHHHHHhCcCChhhCCC
Confidence 111122345678888999999999944
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-20 Score=171.58 Aligned_cols=196 Identities=22% Similarity=0.322 Sum_probs=136.6
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|++++. +|++++++.+. +..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGS----YLKKDELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEE----EecCCeEE
Confidence 3667789999999999999985 688999999975332 34678899999886 67777777766 66667788
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++++|.+.+. ++|.|+++++++.++|+|||.+.......
T Consensus 74 l~~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 74 IVMEFC-SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred EEEecC-CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 899998 7777766542 56777778889999999999998765432
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
. .....|+..| .++||||||++++||++|+.|+......... .......-+.+.. .
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~~~~~~~~~-----~ 220 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL------FKIATNGPPGLRN-----P 220 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH------HHHHhcCCCCcCc-----c
Confidence 1 1223455444 5899999999999999999998643211100 0000100111111 0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
......+.+++..|++.+|++|+++
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~t~ 245 (253)
T cd05122 221 EKWSDEFKDFLKKCLQKNPEKRPTA 245 (253)
T ss_pred cccCHHHHHHHHHHccCChhhCCCH
Confidence 1113456788889999999999553
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-21 Score=182.72 Aligned_cols=157 Identities=20% Similarity=0.248 Sum_probs=113.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-cCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC-IKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~-~~~~ 246 (408)
+++|+..+.||+|+||.||+|+. .+|+.||+|++.... .......+.+|+.++. +|+|++++.++..... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46899999999999999999987 568899999986422 2234566888999887 7888888877632211 1223
Q ss_pred cchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 247 CFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
..++++||+ ++ ++...+ +++|.|++++.++.+||+|||+++.....
T Consensus 82 ~~~lv~e~~-~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 82 DVYIVQELM-ET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred eEEEEehhc-cc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 467788887 32 333322 26888999999999999999999865432
Q ss_pred CCe---eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSN---LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~---~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... .....||..| .++|||||||+++||+||+.||..
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 211 1223455555 579999999999999999999854
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-21 Score=177.34 Aligned_cols=156 Identities=22% Similarity=0.276 Sum_probs=112.2
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
.+.++|+..+.||+|+||.||+|... +|+.||+|+++.... .......+.+|++++. +|+|++++.++ +...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~----~~~~ 78 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEI----VTDK 78 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeehe----ecCc
Confidence 45678999999999999999999985 588999999975322 2233456788998886 77877777766 3332
Q ss_pred ----------ccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceE
Q 037624 246 ----------ACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAF 281 (408)
Q Consensus 246 ----------~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~k 281 (408)
...++++||+ ++ ++...+ .+++.|+++++++.+|
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~-~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 79 QDALDFKKDKGAFYLVFEYM-DH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred chhhhccccCCcEEEEEccc-Cc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEE
Confidence 3678888988 54 222222 1677888888999999
Q ss_pred EeecccccccCCCCCe-eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 282 VADFGMTMHLYCDSSN-LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 282 i~DfGla~~~~~~~~~-~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+|||+++........ .....++..| .++|||||||+++||++|+.||..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999876432211 1111222222 679999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=172.22 Aligned_cols=155 Identities=16% Similarity=0.250 Sum_probs=114.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEeccccc--CCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC--
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWE--NEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-- 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-- 244 (408)
.+|...+.||+|+||.||+|+. .+++.||+|.+.... .......+.|.+|++++. +|+|+++++++ +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~----~~~~~ 77 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGC----LRDPE 77 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEE----EEcCC
Confidence 4688889999999999999997 458899999875321 112334567889999886 77777766665 332
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++++||. ++++|.+++. ++|.|++++.++.++|+|||+++..
T Consensus 78 ~~~~~~v~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 78 EKKLSIFVEYM-PGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred CCEEEEEEEeC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 34567888888 7777765541 5777888889999999999999865
Q ss_pred CCC---CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCD---SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~---~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... ....+...|+..| .++|||||||+++||+||+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 321 1111234466666 679999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=174.12 Aligned_cols=150 Identities=23% Similarity=0.280 Sum_probs=108.0
Q ss_pred cccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeeecCCcc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~~~~~~ 247 (408)
|+..+.||+|+||.||+|+... ++.||+|++..... .......+.+|+.++. .|+|+++++++ +.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~----~~~~~~ 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDV----CHGPRT 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEE----EeeccC
Confidence 4567889999999999999864 88999999975332 2223455677877664 47888888777 444443
Q ss_pred -----chhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccc
Q 037624 248 -----FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 248 -----~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
.++++||+ . +++.+++. +++.|+++++++++||+|||+
T Consensus 76 ~~~~~~~l~~e~~-~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 76 DRELKLTLVFEHV-D-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred CCCceeEEEehhc-c-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence 77888887 3 24443321 677788888999999999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
++....... .....++..| .++|||||||+++||+||+.|+..
T Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 154 ARIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred ceeccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccC
Confidence 987643321 1222344444 689999999999999999998864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-22 Score=200.68 Aligned_cols=166 Identities=25% Similarity=0.419 Sum_probs=133.7
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeec
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCI 243 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~ 243 (408)
.+++-..++|...++||+|+||.|..++.. .++++|+|++.+...........|..|-.+| .+.|-.-|+.+ .|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDim-v~~ns~Wiv~L-hyAFQ 145 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIM-VFGNSEWIVQL-HYAFQ 145 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHH-HcCCcHHHHHH-HHHhc
Confidence 456666789999999999999999999984 5889999999875444344456788899999 55554333332 22367
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
++.+.|+||+|| ++|+|...+. +||.|++++..|++|++|||-+-.
T Consensus 146 D~~~LYlVMdY~-pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 146 DERYLYLVMDYM-PGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred CccceEEEEecc-cCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHh
Confidence 788999999999 9999987773 899999999999999999999877
Q ss_pred cCCCCCe-eeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccc
Q 037624 291 LYCDSSN-LTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLS 333 (408)
Q Consensus 291 ~~~~~~~-~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~ 333 (408)
+..+... ....+||+-| ..+|.||+||++|||+.|..||....
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads 285 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS 285 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH
Confidence 7655433 4667899999 68999999999999999999997443
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-21 Score=181.08 Aligned_cols=158 Identities=23% Similarity=0.249 Sum_probs=116.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.++. +|+|++++.+++.........
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 367888899999999999999974 588999999975322 2234566788998886 788888777663322223456
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ + +++..++. ++|.|+++++++.+||+|||+++.....
T Consensus 83 ~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 83 VYVVMDLM-E-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEEehh-h-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 78888888 4 35554441 6788888999999999999999765432
Q ss_pred CC----eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SS----NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~----~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. ......|+..| .++|||||||+++||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~ 214 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPG 214 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCC
Confidence 21 11233455555 679999999999999999999864
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=171.34 Aligned_cols=194 Identities=19% Similarity=0.207 Sum_probs=137.7
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++.. .+++.+|+|.+..... .......+.+|++++. +|+|++++.++ +......+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEA----FLDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhh----hccCCEEE
Confidence 467788999999999999986 4678999999875332 2234567888998886 78888887776 66668889
Q ss_pred hhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccccC
Q 037624 250 FMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+++||+ +++++..++. +++.|+++++++.+|++|||+++...
T Consensus 76 ~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~ 154 (256)
T cd08530 76 IVMEYA-PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK 154 (256)
T ss_pred EEehhc-CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhc
Confidence 999998 7777765541 56777778888999999999998765
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... .....|+..| .++|+||||++++||++|+.|+...... .....+.......
T Consensus 155 ~~~--~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~--- 220 (256)
T cd08530 155 KNM--AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---------DLRYKVQRGKYPP--- 220 (256)
T ss_pred cCC--cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHhcCCCCC---
Confidence 431 1123455555 5799999999999999999998643210 0001111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..|++.+|++|++
T Consensus 221 -~~~~~~~~~~~li~~~l~~~p~~Rp~ 246 (256)
T cd08530 221 -IPPIYSQDLQNFIRSMLQVKPKLRPN 246 (256)
T ss_pred -CchhhCHHHHHHHHHHcCCCcccCCC
Confidence 11133455778889999999999955
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=171.80 Aligned_cols=197 Identities=19% Similarity=0.235 Sum_probs=138.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||++... ++..||+|++.... ......+.+.+|++++. +|+|++++.+. .......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~----~~~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN-MSEKEREDALNEVKILKKLNHPNIIKYYES----FEEKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc-CChHHHHHHHHHHHHHHhcCCCChhheEEE----EecCCEEE
Confidence 4677789999999999999985 58899999997533 22345667889998886 77887777776 55567788
Q ss_pred hhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccccC
Q 037624 250 FMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+++||+ ++++|..++. +++.|+++++++.++|+|||++....
T Consensus 76 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 154 (258)
T cd08215 76 IVMEYA-DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS 154 (258)
T ss_pred EEEEec-CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecc
Confidence 899998 7777765541 56777778888999999999998765
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
..........|+..| .++||||+|++++||++|+.|++.... ...............
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~-- 223 (258)
T cd08215 155 STVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL---------LELALKILKGQYPPI-- 223 (258)
T ss_pred cCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH---------HHHHHHHhcCCCCCC--
Confidence 433222233455555 689999999999999999999864321 011111111111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.......+.+++..|++.+|++|++.
T Consensus 224 --~~~~~~~~~~~i~~~l~~~p~~Rp~~ 249 (258)
T cd08215 224 --PSQYSSELRNLVSSLLQKDPEERPSI 249 (258)
T ss_pred --CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 01223456788899999999999553
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.2e-21 Score=172.64 Aligned_cols=196 Identities=18% Similarity=0.301 Sum_probs=138.1
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... .....+.+.+|++++. +|+|++++.++ +..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGS----IETSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEE----EEeCCEEE
Confidence 3667789999999999999875 578999999976432 2235678999999886 78888777777 66667788
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++++|+ ++++|.+++. ++|.|++++.++.+||+|||+++.......
T Consensus 76 ~v~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 76 IILEYA-ENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred EEEecC-CCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 999998 7777776552 677788888889999999999987654333
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
......|+..| .++||||+|++++||++|+.|+........ .........+.+..
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~------- 221 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA------LFRIVQDDHPPLPE------- 221 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHhccCCCCCCC-------
Confidence 22223445444 679999999999999999999864321110 00000011111111
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.+|++|++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~ 244 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPT 244 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcC
Confidence 11234568889999999999954
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.1e-21 Score=177.65 Aligned_cols=197 Identities=18% Similarity=0.225 Sum_probs=130.3
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|+..+.||+|+||.||+|...+ ++.||||.++.... ......+..|+.++. .|+|+++++++ +..+..
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~----~~~~~~ 88 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGY----FITDSD 88 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhhee----eecCCe
Confidence 467778999999999999999965 88999999975321 223455667776554 58888888887 777777
Q ss_pred chhhhhhcccchhhhhhh-----------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.++++||+ ++ ++.... .++|.|+++++++.+||+|||++....
T Consensus 89 ~~~v~e~~-~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 89 VFICMELM-ST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EEEEeecc-Cc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 88888887 32 111100 267788889999999999999987653
Q ss_pred CCCCeeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 293 CDSSNLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
..... ....|+..| .++|||||||+++||++|+.|+..... ....+..+++....
T Consensus 167 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 237 (296)
T cd06618 167 DSKAK-TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--------EFEVLTKILQEEPP 237 (296)
T ss_pred CCCcc-cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--------HHHHHHHHhcCCCC
Confidence 22111 112233333 479999999999999999999863211 01112222222111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .........+.+++..|++.+|++|++
T Consensus 238 ~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~ 266 (296)
T cd06618 238 SL--PPNEGFSPDFCSFVDLCLTKDHRKRPK 266 (296)
T ss_pred CC--CCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 10 000112345778889999999999944
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=177.44 Aligned_cols=192 Identities=19% Similarity=0.229 Sum_probs=129.0
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|...+.||+|+||+||+|+. .+|+.||+|++...........+.+.+|++++. +|+|++++.++ +......++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~l 98 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGC----YLKEHTAWL 98 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEE----EEeCCEEEE
Confidence 44557799999999999997 458899999987543333334567888998887 78888888877 677777888
Q ss_pred hhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||+ .+ ++...+ .++|.|+++++++.+||+|||++.......
T Consensus 99 v~e~~-~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~- 175 (313)
T cd06633 99 VMEYC-LG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN- 175 (313)
T ss_pred EEecC-CC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC-
Confidence 99987 32 333222 167788888889999999999987543221
Q ss_pred eeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 297 NLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 297 ~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
...|+..| .++|||||||+++||++|+.|+......... ........+.... .
T Consensus 176 ---~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~~~~~~~~~---~ 243 (313)
T cd06633 176 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNDSPTLQS---N 243 (313)
T ss_pred ---CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhcCCCCCCc---c
Confidence 12333333 5789999999999999999998643211100 0000000111111 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.+|++|++
T Consensus 244 ---~~~~~l~~li~~~l~~~P~~Rp~ 266 (313)
T cd06633 244 ---EWTDSFRGFVDYCLQKIPQERPA 266 (313)
T ss_pred ---ccCHHHHHHHHHHccCChhhCcC
Confidence 11224567888999999999944
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.3e-21 Score=181.86 Aligned_cols=156 Identities=23% Similarity=0.297 Sum_probs=112.4
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeec-C
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCI-K 244 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~-~ 244 (408)
..++|+..+.||+|+||.||+|... +|+.+|||++..... .......+.+|+.++. .|+|+++++++ +.. .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~---~~~~~ 80 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNV---IKAEN 80 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeee---eccCC
Confidence 3567888899999999999999985 588999999864321 2223456778888875 56666666655 222 2
Q ss_pred Cccchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 245 DACFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
....++++||+ + ++|..++ +++|.|+++++++.+||+|||+++...
T Consensus 81 ~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 81 DKDIYLVFEYM-E-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred CceEEEEeccc-c-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 34578888987 4 3554433 167888889999999999999998664
Q ss_pred CCCC-----eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 293 CDSS-----NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 293 ~~~~-----~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.... ......||..| .++|||||||+++||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCC
Confidence 3321 11233456555 579999999999999999999853
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=174.63 Aligned_cols=190 Identities=17% Similarity=0.180 Sum_probs=123.5
Q ss_pred eecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeeecCCccchhhh
Q 037624 179 CFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
+||+|+||.||+|... +++.||+|.+.............+..|..++. .|++++.+... +......++++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA----FHTPDKLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeee----eecCCEEEEEE
Confidence 4899999999999874 58899999987543222222233444443332 45555555444 55667788899
Q ss_pred hhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeee
Q 037624 253 TWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT 299 (408)
Q Consensus 253 e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~ 299 (408)
||+ ++++|..++. ++|.|+++++++.+||+|||+++....... .
T Consensus 77 e~~-~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~--~ 153 (278)
T cd05606 77 DLM-NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--H 153 (278)
T ss_pred ecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC--c
Confidence 999 8888876552 677888888999999999999876532211 1
Q ss_pred ecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHH
Q 037624 300 LLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366 (408)
Q Consensus 300 ~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 366 (408)
...|+..| .++|||||||+++||++|+.||........ ..........++.+.. ..
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~ 222 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLTMAVELPD-------SF 222 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----HHHHHHhhccCCCCCC-------cC
Confidence 23455444 578999999999999999999864311110 0000011111222221 11
Q ss_pred HHHHHHHHHhhccCCCCCcC
Q 037624 367 IVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 367 ~~~~~~l~~~C~~~~P~~Rm 386 (408)
...+.+++..|++.+|++|+
T Consensus 223 s~~~~~li~~~l~~~p~~R~ 242 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRL 242 (278)
T ss_pred CHHHHHHHHHHhhcCHHhcc
Confidence 34566788899999999995
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=174.18 Aligned_cols=151 Identities=19% Similarity=0.218 Sum_probs=114.4
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.++. +|+|+++++++ +..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDV----FPHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeE----EecCCeeE
Confidence 3667789999999999999974 688999999876332 2234567899999886 78888888777 66677788
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ +++|.+++. ++|.|+++++++.++|+|||+++......
T Consensus 76 ~v~e~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 76 LVMEYM--PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred EEeccc--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 899987 555554431 67778888899999999999998765432
Q ss_pred C-eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 296 S-NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 296 ~-~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
. ......|+..| .++||||+||+++||+||+.|+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 202 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFP 202 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcC
Confidence 1 11223344444 68999999999999999987775
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=178.44 Aligned_cols=149 Identities=15% Similarity=0.230 Sum_probs=108.8
Q ss_pred ceeeccc--ceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 177 KYCFGTG--GYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 177 ~~~iG~G--~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
.++||+| +||+||++.. .+|+.||+|++..... .....+.+.+|++++. +|+|++++.++ +..+...+++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~----~~~~~~~~lv 77 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRAT----FIADNELWVV 77 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEE----EEECCEEEEE
Confidence 4679999 7899999988 5689999999975322 2233456778988885 78887777777 6777788999
Q ss_pred hhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 252 NTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+||+ +++++.+++. +||.|++++.++.++++|||.+........
T Consensus 78 ~e~~-~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 78 TSFM-AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred Eecc-CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999 8887765541 678888899999999999986543321100
Q ss_pred e-------eeecccCC-------------CC-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 N-------LTLLAGTY-------------GY-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ~-------~~~~~gt~-------------~y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. .....++. .| .++|||||||+++||+||+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0 00011222 23 689999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-21 Score=173.10 Aligned_cols=183 Identities=17% Similarity=0.228 Sum_probs=123.1
Q ss_pred eeecccceeEEEEEEeCCCc-----------EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 178 YCFGTGGYGSVYIAQLTSSK-----------VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~-----------~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+.||+|+||.||+|...+.. .|++|.+..... ....|.+|+.++. +|+|+++++++ +..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~ 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGV----CVR 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeE----Eec
Confidence 36999999999999985432 478887754221 1578889998886 78888888887 555
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCC-------ceEEe
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLREL-------EAFVA 283 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~-------~~ki~ 283 (408)
...++++||+ ++++|..++. ++|.|++++.++ .+||+
T Consensus 73 -~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 73 -DENIMVEEYV-KFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred -CCcEEEEEcC-CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeC
Confidence 5678899999 8888876652 678888888777 79999
Q ss_pred ecccccccCCCCCee--------eecccC-CCC-cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccC
Q 037624 284 DFGMTMHLYCDSSNL--------TLLAGT-YGY-EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 284 DfGla~~~~~~~~~~--------~~~~gt-~~y-~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
|||+++......... ....+. ..| .++|||||||++|||++ |..|+........ .....+
T Consensus 151 Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~---------~~~~~~ 221 (259)
T cd05037 151 DPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK---------ERFYQD 221 (259)
T ss_pred CCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH---------HHHHhc
Confidence 999998753311100 001111 122 67999999999999999 5667653211000 000111
Q ss_pred CC-CCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 353 PR-LSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 353 ~~-l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
+. ...+ ....+.+++..||+.+|++|+
T Consensus 222 ~~~~~~~-------~~~~~~~li~~~l~~~p~~Rp 249 (259)
T cd05037 222 QHRLPMP-------DCAELANLINQCWTYDPTKRP 249 (259)
T ss_pred CCCCCCC-------CchHHHHHHHHHhccChhhCC
Confidence 11 1111 114677888999999999993
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-21 Score=175.94 Aligned_cols=151 Identities=20% Similarity=0.260 Sum_probs=111.8
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--ccc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--ACF 248 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~~~ 248 (408)
|+..+.||+|+||.||+|+.. +++.+|+|++.... ......+.+.+|++++. +|+|++++.++ +... ...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEI----VTSKGKGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheee----EecCCCCcE
Confidence 456688999999999999985 48899999998643 22334567889998886 78887777777 5555 678
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++++|+ ++ ++...+. ++|.|+++++++.+||+|||+++.....
T Consensus 76 ~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 76 YMVFEYM-DH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred EEEeccc-cc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 8999998 43 4444331 6778888899999999999999876443
Q ss_pred CC-eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SS-NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~-~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. ..+...++..| .++||||||++++||+||+.|++.
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~ 204 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQG 204 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 21 11111222222 689999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.3e-21 Score=176.70 Aligned_cols=209 Identities=13% Similarity=0.114 Sum_probs=116.2
Q ss_pred hhcccceeecccceeEEEEEEeCCC----cEEEEEecccccCCCcchh---------hHHHHHHHHhc--ccCCcceeee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSS----KVIALKKLHHWENEEPAST---------RSFQNEVDILY--PKYDIETLLS 236 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g----~~vAvK~~~~~~~~~~~~~---------~~~~~E~~~l~--~~~n~~~l~~ 236 (408)
+.|...+.||+|+||.||+|...++ ..+|+|...... ...... .....+...+. .|++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN-ETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC-CchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4688889999999999999998543 456666543211 110000 01111122222 6777777776
Q ss_pred EeEeeecCCccchhhhhhcccc-hhh------------------------------hhhhccCccccccccCCceEEeec
Q 037624 237 FMDFVCIKDACFWFMNTWRGEA-CSV------------------------------FCTMIMKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 237 ~~~~~~~~~~~~~lv~e~~~~~-g~l------------------------------~~~l~~k~~~~~l~~~~~~ki~Df 285 (408)
+...........++++++...+ ..+ .-|.++||.|++++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 4211000000111122211000 000 001138999999999999999999
Q ss_pred ccccccCCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccch
Q 037624 286 GMTMHLYCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIM 346 (408)
Q Consensus 286 Gla~~~~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~ 346 (408)
|+|+....... ......||+.| .++|||||||+++||+||+.||.................
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~ 250 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF 250 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH
Confidence 99987643221 11234688887 689999999999999999999974421111000000001
Q ss_pred hhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 347 LLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 347 ~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+..+..+.+.. ..+...+.+++..|++.+|++|++
T Consensus 251 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~rp~ 285 (294)
T PHA02882 251 IKRLHEGKIKI------KNANKFIYDFIECVTKLSYEEKPD 285 (294)
T ss_pred HHHhhhhhhcc------CCCCHHHHHHHHHHHhCCCCCCCC
Confidence 11222222211 122345678888899999999943
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=176.82 Aligned_cols=152 Identities=19% Similarity=0.323 Sum_probs=112.1
Q ss_pred cccceeecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--c
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--A 246 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~ 246 (408)
|+..+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++. +|+|++++.++ +... .
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 77 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEV----FLEHADK 77 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEE----EeCCCCc
Confidence 667788999999999999984 47899999997633222334567788998886 88888888887 5555 6
Q ss_pred cchhhhhhcccchhhhhhh--------------------------------------ccCcccccccc----CCceEEee
Q 037624 247 CFWFMNTWRGEACSVFCTM--------------------------------------IMKPLSWIGLR----ELEAFVAD 284 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l--------------------------------------~~k~~~~~l~~----~~~~ki~D 284 (408)
..++|+||+ ++ ++...+ +++|.|++++. ++.+||+|
T Consensus 78 ~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 78 SVYLLFDYA-EH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred eEEEEEeCC-Cc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 788999987 43 222111 16788888888 89999999
Q ss_pred cccccccCCCCC---eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 285 FGMTMHLYCDSS---NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 285 fGla~~~~~~~~---~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
||+++....... ......+|..| .++|||||||+++||+||+.|+..
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 218 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKG 218 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 999986543221 11123344444 579999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-20 Score=172.65 Aligned_cols=148 Identities=21% Similarity=0.209 Sum_probs=106.7
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC--cc
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD--AC 247 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~--~~ 247 (408)
|+..+.||+|+||.||+|+. .+++.||+|+++..... .......+|+.++. .|+|++++.++ +..+ +.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~----~~~~~~~~ 74 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS--LEQVNNLREIQALRRLSPHPNILRLIEV----LFDRKTGR 74 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC--chhhhHHHHHHHHhhcCCCCCccceEEE----EecCCCCc
Confidence 45568899999999999997 45889999998753221 12234457777775 48888888877 5555 67
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ + +++.+.+. ++|.|++++. +.+||+|||+++....
T Consensus 75 ~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 75 LALVFELM-D-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EEEEEecC-C-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 88999998 4 35554431 5677777888 9999999999987643
Q ss_pred CCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.... ....++..| .++|||||||+++||++|+.||..
T Consensus 152 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 152 KPPY-TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred CCCc-CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 2211 112334333 589999999999999999999864
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=178.38 Aligned_cols=158 Identities=18% Similarity=0.162 Sum_probs=114.6
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee--ecC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV--CIK 244 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~--~~~ 244 (408)
..+.|+..+.||+|+||.||+|+. .+|+.||+|.+.... .+......+.+|+.++. +|+|++++++++... ...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 457799999999999999999997 468899999986432 22233456778998886 788888777762110 011
Q ss_pred Cccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 245 DACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
....++++||+ .+ ++...+ +++|.|++++.++.+||+|||+++....
T Consensus 93 ~~~~~lv~e~~-~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 93 FQDVYLVMELM-DA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred cCcEEEEEecc-CC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 12457888887 33 333322 2788999999999999999999987643
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. ......||..| .++|||||||+++||++|+.||..
T Consensus 171 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 171 SF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred CC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 22 12233456656 689999999999999999999853
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.2e-22 Score=188.30 Aligned_cols=195 Identities=22% Similarity=0.298 Sum_probs=138.4
Q ss_pred hhcccceeecccceeEEEEEEeCCCc-EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~-~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|++...||.|+||.||+|..++.. ..|.|.+.. ......++|+-||+||+ .||+++++++. +.-++..
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~a----yy~enkL 104 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSA----YYFENKL 104 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHH----HhccCce
Confidence 45666677999999999999987644 456777754 33445789999999998 88888888877 5556667
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
|++.||| .+|.+...+- +|.-|+++.-+|.++++|||++......
T Consensus 105 wiliEFC-~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 105 WILIEFC-GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST 183 (1187)
T ss_pred EEEEeec-CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhH
Confidence 7888888 7776655441 4566667778999999999998654332
Q ss_pred CCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 295 SSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 295 ~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
......+.||++| .++|||||||.|.||.-+.+|......+.-.. .+...--|.+..
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll------KiaKSePPTLlq 257 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL------KIAKSEPPTLLQ 257 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH------HHhhcCCCcccC
Confidence 2223457888877 79999999999999999999976543322110 011111233322
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
| ......+.++...|+.++|..|
T Consensus 258 P-----S~Ws~~F~DfLk~cL~Knp~~R 280 (1187)
T KOG0579|consen 258 P-----SHWSRSFSDFLKRCLVKNPRNR 280 (1187)
T ss_pred c-----chhhhHHHHHHHHHHhcCCccC
Confidence 2 2344456677778999999999
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-21 Score=176.29 Aligned_cols=181 Identities=15% Similarity=0.238 Sum_probs=123.1
Q ss_pred eeecccceeEEEEEEeCC--------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 178 YCFGTGGYGSVYIAQLTS--------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
+.||+|+||.||+|.... ...||+|.+... .....+.|..|+.++. .|+|++++.++ +..+..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~----~~~~~~ 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGV----CVCGDE 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeE----EEeCCC
Confidence 359999999999998732 234888887542 2234567888888886 78888888877 666677
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCc--------eEEeec
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELE--------AFVADF 285 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~--------~ki~Df 285 (408)
.++++||+ ++|+|..++. ++|.|++++.+.. +|++||
T Consensus 74 ~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 74 SIMVQEYV-KFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred cEEEEecC-CCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 88999999 8888877762 6777888876554 599999
Q ss_pred ccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCC-CCCcccccccCCccccccchhhhcc
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGR-QPGELLSSLSSSSSSDQNIMLLDVL 351 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 351 (408)
|++....... ...|+..| .++|||||||++|||++|. .|+....... .....
T Consensus 153 g~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~----------~~~~~ 218 (258)
T cd05078 153 GISITVLPKE----ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK----------KLQFY 218 (258)
T ss_pred ccccccCCch----hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH----------HHHHH
Confidence 9987553221 12333333 5799999999999999985 5554221100 01111
Q ss_pred C--CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 352 D--PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 352 d--~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ..+.. .....+.+++..||+.+|++|++
T Consensus 219 ~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps 249 (258)
T cd05078 219 EDRHQLPA-------PKWTELANLINQCMDYEPDFRPS 249 (258)
T ss_pred HccccCCC-------CCcHHHHHHHHHHhccChhhCCC
Confidence 1 11111 11234678889999999999943
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-21 Score=182.90 Aligned_cols=145 Identities=17% Similarity=0.168 Sum_probs=108.1
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
....+|...+.||+|+||.||+|+.. +++.||+|.... .....|+.++. +|+|+++++++ +...
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~---------~~~~~E~~~l~~l~h~~iv~~~~~----~~~~ 129 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK---------GTTLIEAMLLQNVNHPSVIRMKDT----LVSG 129 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc---------cccHHHHHHHHhCCCCCCcChhhe----EEeC
Confidence 34467999999999999999999985 467899997542 12345777776 88888888877 6666
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...+++++++ . +++..++. +||.|++++.++.+||+|||+++..
T Consensus 130 ~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 130 AITCMVLPHY-S-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred CeeEEEEEcc-C-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 6677777776 3 34444431 7888999999999999999999754
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCC
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPG 329 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~ 329 (408)
.... ......||..| .++|||||||++|||+++..|+
T Consensus 208 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 208 VVAP-AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccCc-ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 3221 22334567666 6899999999999999966553
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-20 Score=174.27 Aligned_cols=156 Identities=21% Similarity=0.217 Sum_probs=110.7
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|... +|+.||+|+++.... .......+.+|++++. +|+|++++.+++. ......
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVV--GKHLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEe--cCCCCe
Confidence 457888999999999999999984 588999999875332 1222345678988886 7888887777621 112245
Q ss_pred chhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ ++ ++...+ +++|.|+++++++.+||+|||+++....
T Consensus 83 ~~lv~e~~-~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 83 IFLVMEYC-EQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEEEecC-CC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 67888887 43 333222 1678888899999999999999987643
Q ss_pred CCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.....+...++..| .++|||||||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 32111111223333 689999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-20 Score=169.34 Aligned_cols=199 Identities=15% Similarity=0.175 Sum_probs=132.8
Q ss_pred HHHHHHHHhhcccceee--cccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHH-HhcccCCcceeeeEeE
Q 037624 164 FGDIIEATEDFDIKYCF--GTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVD-ILYPKYDIETLLSFMD 239 (408)
Q Consensus 164 ~~~l~~at~~f~~~~~i--G~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~-~l~~~~n~~~l~~~~~ 239 (408)
..++..-.++|+..+.+ |+|+||.||+++. .++..+|+|.+...... ....++. ++..|+|++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------~~e~~~~~~~~~h~~iv~~~~~-- 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN------AIEPMVHQLMKDNPNFIKLYYS-- 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc------hhhHHHHHHhhcCCCEEEEEEE--
Confidence 34455556677776666 9999999999997 45788999998653211 1111122 22278888888877
Q ss_pred eeecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC-ceEEeec
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL-EAFVADF 285 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~-~~ki~Df 285 (408)
+..+...++++||+ ++++|..++. ++|.|+++..++ .++|+||
T Consensus 78 --~~~~~~~~iv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 78 --VTTLKGHVLIMDYI-KDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred --EecCCeeEEEEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 66677899999999 8889887763 577777788777 9999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
|+++...... ...|+..| .++|||||||+++||+||+.||....... .....+......
T Consensus 155 g~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~ 225 (267)
T PHA03390 155 GLCKIIGTPS----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-----LDLESLLKRQQK 225 (267)
T ss_pred ccceecCCCc----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-----hhHHHHHHhhcc
Confidence 9998764322 12344444 67999999999999999999986321110 000011111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.... .......+.+++..|++.+|.+|+.
T Consensus 226 ~~~~-----~~~~~~~~~~li~~~l~~~p~~R~~ 254 (267)
T PHA03390 226 KLPF-----IKNVSKNANDFVQSMLKYNINYRLT 254 (267)
T ss_pred cCCc-----ccccCHHHHHHHHHHhccChhhCCc
Confidence 1111 1122334667778999999999954
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-20 Score=174.06 Aligned_cols=153 Identities=18% Similarity=0.262 Sum_probs=110.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC---
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--- 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--- 245 (408)
++|+..+.||+|+||.||+|... +++.||||.+..... .......+.+|++++. +|+|++++.++ +...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~ 86 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEI----CRTKATP 86 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEE----Eeccccc
Confidence 46888999999999999999984 588999999865322 2222345678888886 88998888877 3332
Q ss_pred -----ccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecc
Q 037624 246 -----ACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 246 -----~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfG 286 (408)
...++++||+ .+ ++...+ .++|.|++++.++.+||+|||
T Consensus 87 ~~~~~~~~~lv~e~~-~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 87 YNRYKGSFYLVFEFC-EH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred ccCCCceEEEEEcCC-Cc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 2347888887 32 333322 167888889999999999999
Q ss_pred cccccCCCCCe----eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 287 MTMHLYCDSSN----LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 287 la~~~~~~~~~----~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
++......... .....++..| .++|||||||+++||+||+.|+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~ 226 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG 226 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99765432111 1122344444 579999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-20 Score=176.63 Aligned_cols=149 Identities=20% Similarity=0.198 Sum_probs=107.9
Q ss_pred ceeecccceeEEEEEEeC-CCcEEEEEecccccCCCc-----------chhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 177 KYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEP-----------ASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~-----------~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
.+.||+|+||+||+|... +++.||||.++....... .....+.+|++++. +|+|++++.++ +
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~ 89 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV----Y 89 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE----E
Confidence 467999999999999974 588999999865322110 01225778999886 77887777776 6
Q ss_pred cCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
..+...++++||+ + +++.+++. +++.|++++.++.+|++|||+++
T Consensus 90 ~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 90 VEGDFINLVMDIM-A-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR 167 (335)
T ss_pred ecCCcEEEEEecc-c-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence 6677888999998 4 45655441 57788888999999999999998
Q ss_pred ccCCC--------------CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 290 HLYCD--------------SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 290 ~~~~~--------------~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... ........++..| .++|||||||+++||+||+.|+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 236 (335)
T PTZ00024 168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236 (335)
T ss_pred ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 65411 1111112233333 579999999999999999999863
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-20 Score=171.97 Aligned_cols=149 Identities=20% Similarity=0.272 Sum_probs=109.0
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-cCCcceeeeEeEeeecCCccch
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-KYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
|+..+.||+|++|+||+|+.. +++.||||++...... .......+|+..+. + |+|++++.++ +..+...+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~----~~~~~~~~ 74 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEV----FRENDELY 74 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHH----hhcCCcEE
Confidence 455688999999999999985 4788999998753221 12233456777775 5 8888888887 67788888
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+++||+ ++++..++. +++.|+++++++.++|+|||+++.....
T Consensus 75 lv~e~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 75 FVFEYM--EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EEEecC--CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 999988 445544331 6777888889999999999999866432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. .....|+..| .++||||||++++||+||+.|+..
T Consensus 153 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~ 201 (283)
T cd07830 153 PP-YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPG 201 (283)
T ss_pred CC-cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCC
Confidence 11 1112333333 689999999999999999998853
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-20 Score=177.91 Aligned_cols=158 Identities=20% Similarity=0.340 Sum_probs=133.8
Q ss_pred HHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 168 IEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 168 ~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
...+..|.....||+|.|+.|..|+.. .|..||+|.+++... +....+.+.+|+++|. .|||+++++.+ ...
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l~HPnIvkl~~v----~~t 126 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSLNHPNIVKLFSV----IET 126 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-ChHHHHHHHHHHHHHHhcCCcceeeeeee----eee
Confidence 344567888999999999999999974 588999999987543 3444556899999997 89999999888 777
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++|+||. .+|.+++|+. +|..|++|+.++++||+|||++..+
T Consensus 127 ~~~lylV~eya-~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 127 EATLYLVMEYA-SGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred cceeEEEEEec-cCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceee
Confidence 88899999999 8899999983 7888999999999999999999988
Q ss_pred CCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.. .....+.+|++.| .++|+||+|||||-|+.|..||+..
T Consensus 206 ~~-~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 206 DY-GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred cc-cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 63 2334567899888 7899999999999999999999843
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-20 Score=173.12 Aligned_cols=158 Identities=21% Similarity=0.250 Sum_probs=109.1
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee----c
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC----I 243 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~----~ 243 (408)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ......+.+|++++. +|+|+++++++..... .
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 468999999999999999999974 5889999998653221 122346778888886 7888888776521100 1
Q ss_pred CCccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeeccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
.....+++++|+ +. ++...+ +++|.|+++++++.+||+|||+++
T Consensus 86 ~~~~~~lv~~~~-~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYM-DH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecC-Cc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 122356777776 32 222111 267888999999999999999998
Q ss_pred ccCCCCCe-----------eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 290 HLYCDSSN-----------LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 290 ~~~~~~~~-----------~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........ .+...|+..| .++|||||||+++||++|+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~ 229 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQG 229 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCC
Confidence 65422110 1122334444 679999999999999999999863
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.5e-21 Score=163.06 Aligned_cols=197 Identities=18% Similarity=0.255 Sum_probs=136.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC----
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK---- 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~---- 244 (408)
+.|...+.+|+|||.-||.++. .++..+|+|++.-.. ....+..++|++.-. .|+|+.+++.+ +..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh----~l~~~~D 93 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDH----QLREEKD 93 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHH----HHHhhcc
Confidence 3577779999999999999984 678899999997533 234677889998875 66666666555 332
Q ss_pred -Cccchhhhhhcccchhhhhhhc---------------------------------------cCccccccccCCceEEee
Q 037624 245 -DACFWFMNTWRGEACSVFCTMI---------------------------------------MKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 245 -~~~~~lv~e~~~~~g~l~~~l~---------------------------------------~k~~~~~l~~~~~~ki~D 284 (408)
....|++..|. ..|++.+++. +||.|+++.+++.+++.|
T Consensus 94 ~~~~~yll~Pyy-~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D 172 (302)
T KOG2345|consen 94 GKHEAYLLLPYY-KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMD 172 (302)
T ss_pred CceeEEEEeehh-ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEe
Confidence 23467777777 7777776662 799999999999999999
Q ss_pred cccccccCCCC---Ce------eeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCcc
Q 037624 285 FGMTMHLYCDS---SN------LTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSS 340 (408)
Q Consensus 285 fGla~~~~~~~---~~------~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 340 (408)
||-+....-.- .. .....-|..| +++|||||||+||+|+.|..||+....
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------ 246 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------ 246 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh------
Confidence 99886543110 00 0112234444 899999999999999999999985421
Q ss_pred ccccchh-hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIML-LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+.+ ..+..+.+.-+... .-...+.+++..|++.||.+|+.
T Consensus 247 --~GgSlaLAv~n~q~s~P~~~---~yse~l~~lik~mlqvdP~qRP~ 289 (302)
T KOG2345|consen 247 --QGGSLALAVQNAQISIPNSS---RYSEALHQLIKSMLQVDPNQRPT 289 (302)
T ss_pred --cCCeEEEeeeccccccCCCC---CccHHHHHHHHHHhcCCcccCCC
Confidence 11122 22333344322111 13445678889999999999944
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-20 Score=172.43 Aligned_cols=151 Identities=21% Similarity=0.263 Sum_probs=112.3
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|++|.||+|... +++.+|+|++..... .......+.+|++++. +|+|++++.++ +..+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDV----FRHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHh----hccCCCEEE
Confidence 345678999999999999984 688999999875332 2234567888998886 78888888887 667778888
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||+ ++ ++...+. ++|.|+++++++.+||+|||.+........
T Consensus 76 v~e~~-~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 76 VFEFM-DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred EEecc-CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 88887 43 4444331 677788888999999999999987654331
Q ss_pred eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......++..| .++|||||||+++||+||+.||..
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 201 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPG 201 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 11122233333 689999999999999999999854
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-20 Score=174.86 Aligned_cols=164 Identities=21% Similarity=0.220 Sum_probs=116.4
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeE
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSF 237 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~ 237 (408)
+....++..++++|...+.||+|+||.||+|.. .+|+.||+|++.... ......+.+.+|++++. +|+|++++.++
T Consensus 6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~ 84 (345)
T cd07877 6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDV 84 (345)
T ss_pred hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence 334567788899999999999999999999986 568899999987532 12223466888998886 78887777766
Q ss_pred eEeee--cCCccchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEe
Q 037624 238 MDFVC--IKDACFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVA 283 (408)
Q Consensus 238 ~~~~~--~~~~~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~ 283 (408)
+.... ......+++++++ ++++...+ .++|.|+++++++.+||+
T Consensus 85 ~~~~~~~~~~~~~~lv~~~~--~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 85 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred eeecccccccccEEEEehhc--ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEe
Confidence 32110 0112345555554 23333221 178889999999999999
Q ss_pred ecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 284 DFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 284 DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
|||+++...... ....||..| .++|||||||+++||++|+.||.
T Consensus 163 dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 163 DFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred cccccccccccc---cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 999998653321 222344444 57999999999999999999985
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.6e-20 Score=174.14 Aligned_cols=157 Identities=18% Similarity=0.208 Sum_probs=114.8
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
++..++++|+..+.||+|+||.||+|... +++.||||++.... ......+.+.+|++++. +|+|++++.++ ++
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~---~~ 79 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDI---FI 79 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeee---Ee
Confidence 45567889999999999999999999864 68899999986432 22234567888999886 77777776665 23
Q ss_pred cCCccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
......++++||+ . +++...+. ++|.|+++++++.+||+|||+++.
T Consensus 80 ~~~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 80 SPLEDIYFVTELL-G-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred cCCCcEEEEeehh-c-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 3455677888887 3 34443331 677888888999999999999976
Q ss_pred cCCCCCeeeecccCCC------------C-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTYG------------Y-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~------------y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...... ...++.. | .++|||||||+++||+||+.||..
T Consensus 158 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 158 QDPQMT---GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred cCCCcC---CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 532211 1112222 2 689999999999999999999854
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.6e-20 Score=173.22 Aligned_cols=156 Identities=19% Similarity=0.226 Sum_probs=109.5
Q ss_pred hcccceeecccceeEEEEEEeC-C--CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-S--SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~--g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
+|+..+.||+|+||.||+++.. . +..||+|++.... ......+.+.+|++++. .|+|+++++++.........
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 3677889999999999999974 3 6789999986422 22223567888998886 48888887765221111223
Q ss_pred cchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..+++++|+ + ++|..++ +++|.|+++++++.+||+|||+++....
T Consensus 80 ~~~~~~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 80 ELYLYEELM-E-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred cEEEEEecc-c-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 455666665 3 3444333 1788999999999999999999986542
Q ss_pred CCC----eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSS----NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~----~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... ......||..| .++|||||||+++||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 211 11234566666 578999999999999999999864
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-21 Score=176.43 Aligned_cols=155 Identities=25% Similarity=0.324 Sum_probs=120.3
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcc-----hhhHHHHHHHHhcccCCcceeeeEeEeeecCCcc
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPA-----STRSFQNEVDILYPKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~-----~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~ 247 (408)
|-..++||+|||+.||||.. ...+.||||+-.... .... -.+...+|-++- +...|++++..|+++..+.+.
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK-~WrdEKKeNYhKHAcREyrIH-KeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNK-NWRDEKKENYHKHACREYRIH-KELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhcc-chhhHhhhhHHHHHHHHHhhh-hccCcceeeeeeeeeeecccc
Confidence 44467899999999999985 567789999864322 1111 122345666666 566777788888888888888
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------cCccccccc---cCCceEEeeccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGL---RELEAFVADFGMTM 289 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~---~~~~~ki~DfGla~ 289 (408)
+.-|.||+ ++.+|.-|+. +||-|+++. .-+.+||.||||++
T Consensus 543 FCTVLEYc-eGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 543 FCTVLEYC-EGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred ceeeeeec-CCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 89999999 8888888873 678888765 45789999999999
Q ss_pred ccCCCCCe-------eeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 290 HLYCDSSN-------LTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 290 ~~~~~~~~-------~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.+..++.. .+...||++| .|+||||.|||+|..+.|+.||..
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 99765432 2456899999 799999999999999999999974
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-20 Score=167.26 Aligned_cols=195 Identities=18% Similarity=0.251 Sum_probs=128.1
Q ss_pred cccceeecccceeEEEEEEeCC-CcEEEEEecccccCC--CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENE--EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~--~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
|...+.||+|+||.||++.... +..+++|.++..... .......+..|+.++. +|+|++++.++ +......
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 77 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHAS----FLERDAF 77 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHH----HhcCCce
Confidence 5667889999999999998743 444566665432211 1222345667887775 78888888777 6677778
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ +++++...+. +++.|+++. +..+||+|||+++..
T Consensus 78 ~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~ 155 (260)
T cd08222 78 CIITEYC-EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK-NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEEEeC-CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee-cCCEeecccCceeec
Confidence 8999999 7777765431 455666665 456999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...........|+..| .++||||||++++||++|+.|+...... .....+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~-- 224 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL---------SVVLRIVEGPTPS-- 224 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH---------HHHHHHHcCCCCC--
Confidence 4433222334455555 5799999999999999999998632111 1111111111111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..||+.+|++|++
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rp~ 250 (260)
T cd08222 225 --LPETYSRQLNSIMQSMLNKDPSLRPS 250 (260)
T ss_pred --CcchhcHHHHHHHHHHhcCChhhCcC
Confidence 11123345678888999999999955
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.7e-20 Score=184.03 Aligned_cols=153 Identities=16% Similarity=0.196 Sum_probs=102.0
Q ss_pred HHhhcccceeecccceeEEEEEEeCC--CcEEEEEec--------------ccccCCCcchhhHHHHHHHHhc--ccCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTS--SKVIALKKL--------------HHWENEEPASTRSFQNEVDILY--PKYDI 231 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~--g~~vAvK~~--------------~~~~~~~~~~~~~~~~E~~~l~--~~~n~ 231 (408)
..++|...+.||+|+||+||+|.... +..+++|.+ .............+.+|+.++. +|+|+
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35789999999999999999987632 222222211 1101111223456889999986 78888
Q ss_pred ceeeeEeEeeecCCccchhhhhhcccchhhhh------------------------------hh--------ccCccccc
Q 037624 232 ETLLSFMDFVCIKDACFWFMNTWRGEACSVFC------------------------------TM--------IMKPLSWI 273 (408)
Q Consensus 232 ~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~------------------------------~l--------~~k~~~~~ 273 (408)
++++++ +......++++++. . +++.. ++ ++||.|++
T Consensus 226 v~l~~~----~~~~~~~~lv~e~~-~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 226 LKIEEI----LRSEANTYMITQKY-D-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred CcEeEE----EEECCeeEEEEecc-c-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 887776 44444444444432 1 01111 11 38899999
Q ss_pred cccCCceEEeecccccccCCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHhCCCC
Q 037624 274 GLRELEAFVADFGMTMHLYCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 274 l~~~~~~ki~DfGla~~~~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p 328 (408)
++.++.+||+|||+++.+...... .....||..| .++|||||||++|||++|+.+
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999876543222 2235677777 679999999999999998754
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8e-20 Score=180.62 Aligned_cols=211 Identities=18% Similarity=0.272 Sum_probs=154.3
Q ss_pred cHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEe
Q 037624 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFM 238 (408)
Q Consensus 163 ~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~ 238 (408)
.++.+...++-|...++||+|.+|.||+++. ++|+.+|||++...... .++...|.+++. .|+|.+..++++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3445556677899999999999999999987 56889999998764332 356667777776 455555555543
Q ss_pred Eee-ecCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEE
Q 037624 239 DFV-CIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFV 282 (408)
Q Consensus 239 ~~~-~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki 282 (408)
-.. -..++..|+||||| .+|+.-+..+ +|..|+++..++.+|+
T Consensus 86 ~k~~~~~~DqLWLVMEfC-~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFC-GGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred EEecCCCCCeEEEEeecc-CCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEE
Confidence 332 23357899999999 8888776653 6778889999999999
Q ss_pred eecccccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccc
Q 037624 283 ADFGMTMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNI 345 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 345 (408)
.|||++..+........+..||+.| ..+|+||+|++..||.-|.+|+..+..+...
T Consensus 165 vDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL------- 237 (953)
T KOG0587|consen 165 VDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL------- 237 (953)
T ss_pred eeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh-------
Confidence 9999999886655555678899887 6899999999999999999998654433221
Q ss_pred hhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc-CCCc
Q 037624 346 MLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP-MQKP 389 (408)
Q Consensus 346 ~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R-m~~~ 389 (408)
..+ |+-+++....+.....++.+.+..|+.+|-++| |.+.
T Consensus 238 --F~I--pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ 278 (953)
T KOG0587|consen 238 --FLI--PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEE 278 (953)
T ss_pred --ccC--CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhh
Confidence 111 111222123345667778889999999999999 4433
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-20 Score=180.02 Aligned_cols=150 Identities=19% Similarity=0.236 Sum_probs=115.2
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEeccccc-CCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWE-NEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.+||+|+|-+||||... +|..||.-.++... ...+...+.|..|+++|. +|+|+++++.. |.........+++|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~S--W~d~~n~~in~iTE 123 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDS--WVDTDNKTINFITE 123 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeh--eecCCCceeeeeee
Confidence 56999999999999984 48888877665432 233455688999999996 66665555544 11233446788999
Q ss_pred hcccchhhhhhhc-----------------------------------cCccccccc-cCCceEEeecccccccCCCCCe
Q 037624 254 WRGEACSVFCTMI-----------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 254 ~~~~~g~l~~~l~-----------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~~~~~ 297 (408)
.+ ..|+|..|+. +|..|+.+. .-|.+||+|.|||+.+... +
T Consensus 124 L~-TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--~ 200 (632)
T KOG0584|consen 124 LF-TSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--H 200 (632)
T ss_pred cc-cCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc--c
Confidence 99 9999999983 455566665 6689999999999987543 3
Q ss_pred eeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 298 LTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 298 ~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
...+.||+.| +.+||||||+-++||+|+.-||...
T Consensus 201 aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC 246 (632)
T KOG0584|consen 201 AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSEC 246 (632)
T ss_pred cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhh
Confidence 4458999987 8899999999999999999999753
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-19 Score=174.08 Aligned_cols=150 Identities=17% Similarity=0.237 Sum_probs=106.6
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c---cCCcceeeeEeEeeecCCc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P---KYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~---~~n~~~l~~~~~~~~~~~~ 246 (408)
.|...+.||+|.||.|-||.. .+++.||||+++.. +...++-..|+.+|. + ..+--+++..+|+ ....+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~-F~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY-FYFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec-ccccc
Confidence 678889999999999999997 55999999999752 334566778888885 2 1223345555555 45556
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCccccccc--cCCceEEeeccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGL--RELEAFVADFGMTM 289 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~--~~~~~ki~DfGla~ 289 (408)
..++|+|.. ..+|+++++ +||+|++|- ..-.+||.|||.|.
T Consensus 262 HlciVfELL--~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 262 HLCIVFELL--STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred ceeeeehhh--hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 667777776 235555552 799999987 34589999999998
Q ss_pred ccCCCCCee---------eecccCCCCcccchhhhhHHHHHHHhCCCCC
Q 037624 290 HLYCDSSNL---------TLLAGTYGYEKCDVYSFGVVALEILMGRQPG 329 (408)
Q Consensus 290 ~~~~~~~~~---------~~~~gt~~y~k~DVySfGvvl~Elltg~~p~ 329 (408)
......... ....|.+.-++.||||||||+.||+||.+-|
T Consensus 340 ~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLf 388 (586)
T KOG0667|consen 340 FESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLF 388 (586)
T ss_pred ccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcccc
Confidence 754332111 1223433338999999999999999996544
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-20 Score=172.58 Aligned_cols=152 Identities=20% Similarity=0.261 Sum_probs=112.7
Q ss_pred hcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc---
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA--- 246 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~--- 246 (408)
+|...+.||+|+||.||+|+... ++.||||++.... ......+.+.+|++++. +|+|++++.++ +....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----~~~~~~~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDI----LRPPSPED 75 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhh----hcccCccc
Confidence 36677899999999999999854 8899999987532 12334567889999886 77777777766 44433
Q ss_pred --cchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 247 --CFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 --~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..+++++|+ + +++.+.+ +++|.|++++.++.++|+|||++...
T Consensus 76 ~~~~~lv~e~~-~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 76 FNDVYIVTELM-E-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred ccceEEEecch-h-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 567888887 4 3454433 16788888999999999999999876
Q ss_pred CCCCC---eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCDSS---NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~~~---~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... ......+|..| .++||||||++++||+||+.||..
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~ 209 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPG 209 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCC
Confidence 54321 12223344444 579999999999999999999854
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.9e-20 Score=174.26 Aligned_cols=152 Identities=20% Similarity=0.255 Sum_probs=111.4
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..++|...+.||+|+||.||+|+.. +++.||||++.... .+....+.+.+|+.++. .|+|++++.++ .....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~ 87 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDV----FTPAS 87 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHH----hhccc
Confidence 4568888999999999999999985 57899999986532 22233456778998886 78888887765 33222
Q ss_pred ------cchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeecccc
Q 037624 247 ------CFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 247 ------~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGla 288 (408)
..++++||+ +++|.+++ .++|.|+++++++.+||+|||++
T Consensus 88 ~~~~~~~~~lv~e~~--~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 88 SLEDFQDVYLVTHLM--GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred cccccccEEEEEecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 367777876 23554433 16788888999999999999999
Q ss_pred cccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
....... ....+|..| .++|||||||+++|++||+.||..
T Consensus 166 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 166 RHTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred ccccccc---cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8654321 112333333 689999999999999999999853
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.8e-20 Score=168.69 Aligned_cols=151 Identities=22% Similarity=0.278 Sum_probs=113.0
Q ss_pred cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|+..+.||+|++|.||+|+.. +++.||+|.+.... .+....+.+..|++++. .|+|++++.++ +......++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~----~~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDV----IHTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhh----hhcCCceEE
Confidence 445678999999999999985 48899999997643 22334567888988886 78888888887 667778888
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||+ + +++..++. +++.|+++++++.+||+|||+++.......
T Consensus 76 v~e~~-~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 76 VFEYC-D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred EecCc-C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 99988 4 36655441 677788888999999999999987643321
Q ss_pred eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......++..| .++|||||||+++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 201 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPG 201 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 11112222222 579999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-19 Score=168.07 Aligned_cols=147 Identities=16% Similarity=0.138 Sum_probs=108.2
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhc
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWR 255 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~ 255 (408)
+.+|.|+++.||++.. +++.||||++.... ......+.+.+|++++. +|+|+++++++ +......++++||+
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~----~~~~~~~~~~~e~~ 81 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTS----FIVDSELYVVSPLM 81 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhhe----eecCCeEEEEEecc
Confidence 4456666766777666 68899999997532 23345678999999987 88888888887 67777788999999
Q ss_pred ccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCCC----
Q 037624 256 GEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS---- 296 (408)
Q Consensus 256 ~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~---- 296 (408)
+.+++..++. +++.|++++.++.+||+|||.+........
T Consensus 82 -~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 82 -AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred -CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 7777766542 678888899999999999998865432111
Q ss_pred ---eeeecccCCC-------------C-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 ---NLTLLAGTYG-------------Y-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ---~~~~~~gt~~-------------y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......++.. | .++|||||||+++||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 0011223322 3 679999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-19 Score=147.87 Aligned_cols=151 Identities=21% Similarity=0.256 Sum_probs=113.3
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|+..++||+|.||+||||+.. .++.||+|+++..+ .+...-.+..+|+.++. +|.|++++... ...+...-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dv----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDV----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhh----hccCceeE
Confidence 4566788999999999999974 48899999998644 33445567889999987 89999988877 66666777
Q ss_pred hhhhhccc---------chhhhhhh-----------------------ccCccccccccCCceEEeecccccccCCCCCe
Q 037624 250 FMNTWRGE---------ACSVFCTM-----------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 250 lv~e~~~~---------~g~l~~~l-----------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
+|+||+.+ ||.+...+ ++||.|.++..+++.|++|||++|.+.-.-..
T Consensus 78 lvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 78 LVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred EeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 78887631 12111110 27899999999999999999999987654433
Q ss_pred eeecccCCCC-------------cccchhhhhHHHHHHHhCCCC
Q 037624 298 LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 298 ~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p 328 (408)
.+..+-|.+| +..|+||-|||+.|+.....|
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence 4444445555 778999999999999884444
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-19 Score=184.07 Aligned_cols=113 Identities=21% Similarity=0.228 Sum_probs=92.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|... +++.||||+++............+.+|+.++. +|+|+++++.. +......
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~----~~~~~~~ 79 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYS----LQSANNV 79 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEE----EEECCEE
Confidence 57888899999999999999985 58899999997644333344567888888876 78888887766 6667788
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccc
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
++|+||+ ++++|..++. +||.|++++.++++||+|||+++
T Consensus 80 ~lVmEy~-~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 80 YLVMEYL-IGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEeCC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999 8888776541 78899999999999999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-19 Score=171.39 Aligned_cols=155 Identities=19% Similarity=0.215 Sum_probs=109.5
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee-------
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV------- 241 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~------- 241 (408)
.+|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++. +|+|++++.+++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 4688889999999999999998 458899999986532 234567889999887 888888877652210
Q ss_pred ---ecCCccchhhhhhcccchhhhhhhc--------------------------------cCccccccc-cCCceEEeec
Q 037624 242 ---CIKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGL-RELEAFVADF 285 (408)
Q Consensus 242 ---~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~-~~~~~ki~Df 285 (408)
+......++++||+ + +++...+. +++.|++++ ++..+|++||
T Consensus 82 ~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 82 VGSLTELNSVYIVQEYM-E-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccccceEEEEeecc-c-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 11123457888887 4 35544331 677788886 5668899999
Q ss_pred ccccccCCCCCe---eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 286 GMTMHLYCDSSN---LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 286 Gla~~~~~~~~~---~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+++........ .....|+..| .++|||||||+++||++|+.||..
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 221 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999765321110 1112334343 589999999999999999999864
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.6e-19 Score=166.06 Aligned_cols=148 Identities=20% Similarity=0.277 Sum_probs=105.4
Q ss_pred eeeccc--ceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhh
Q 037624 178 YCFGTG--GYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 178 ~~iG~G--~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
..||+| +||+||+++. .+|+.||+|.+..... .....+.+.+|+.++. +|+|++++.++ +..+...++++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~----~~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTV----FTTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeee----EecCCceEEEE
Confidence 347777 9999999997 4689999999875332 2234567888988875 78887777777 66677788888
Q ss_pred hhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 253 TWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 253 e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
||+ ..+++..++. +||.|++++.++.+|++||+.+.........
T Consensus 79 e~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 79 PFM-AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred ecc-cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 888 7666665541 6888888999999999999865332111100
Q ss_pred e-------eecccC-------------CCC-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 298 L-------TLLAGT-------------YGY-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 298 ~-------~~~~gt-------------~~y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. ....++ .+| .++|||||||+++||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 0 000111 122 678999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-19 Score=159.41 Aligned_cols=200 Identities=20% Similarity=0.243 Sum_probs=141.2
Q ss_pred HHhhcccc-eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 170 ATEDFDIK-YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 170 at~~f~~~-~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
.|++|... .+||-|-.|.|-.+.. ..|+.+|+|++... ....+|+++-. .|+|+|+++..|+-....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 56666654 5699999999999987 45888999999742 33456776654 899999999998876777
Q ss_pred Cccchhhhhhcccchhhhhhhc-----------------------------------cCccccccc---cCCceEEeecc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGL---RELEAFVADFG 286 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~---~~~~~ki~DfG 286 (408)
..+.++|||+| ++|.|+..+. +||.|++.. .|-..|++|||
T Consensus 131 rkcLLiVmE~m-eGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 131 RKCLLIVMECM-EGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred ceeeEeeeecc-cchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccc
Confidence 78889999999 9999998873 678888765 67789999999
Q ss_pred cccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCC
Q 037624 287 MTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 287 la~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
+|+.-... ....+.+-|+.| ..+|+||+||++|-|++|.+||.......-. .+.-..+....
T Consensus 210 FAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais-----pgMk~rI~~gq 283 (400)
T KOG0604|consen 210 FAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----PGMKRRIRTGQ 283 (400)
T ss_pred cccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC-----hhHHhHhhccC
Confidence 99975432 223445566666 4579999999999999999999754332211 11111121111
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
..-+ .+.+.+-.+...+++..-+..+|.+|
T Consensus 284 y~FP-~pEWs~VSe~aKdlIR~LLkt~PteR 313 (400)
T KOG0604|consen 284 YEFP-EPEWSCVSEAAKDLIRKLLKTEPTER 313 (400)
T ss_pred ccCC-ChhHhHHHHHHHHHHHHHhcCCchhh
Confidence 1111 12333334445566666789999999
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.2e-19 Score=167.25 Aligned_cols=153 Identities=21% Similarity=0.245 Sum_probs=110.2
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
...++|+..+.||+|+||.||+|.. .+|..||||++.... ......+.+.+|++++. +|+|++++.++ +..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~ 86 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDV----FTPD 86 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeee----ecCC
Confidence 3466788899999999999999986 468899999986432 22233456889999886 77777776665 2222
Q ss_pred ------ccchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeeccc
Q 037624 246 ------ACFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 246 ------~~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGl 287 (408)
...+++++|+ ++++..++ +++|.|+++++++.+|++|||+
T Consensus 87 ~~~~~~~~~~lv~e~~--~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 87 LSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ccccccceEEEEEecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 1346777776 22343322 1688888999999999999999
Q ss_pred ccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 288 TMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
++....... ...++..| .++|||||||+++|+++|+.||..
T Consensus 165 ~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 165 ARQTDSEMT---GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred ccccccCcc---ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 986543221 12233333 579999999999999999999864
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.1e-20 Score=170.87 Aligned_cols=195 Identities=18% Similarity=0.246 Sum_probs=144.8
Q ss_pred hcccceeecccceeEEEEEEeCCCc-EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~-~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+++....||-||||.|=.+...... .+|+|.+++.+..+....+....|-.+|. +.+-+++++.- +.++...|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT----frd~kyvY 496 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT----FRDSKYVY 496 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH----hccchhhh
Confidence 3444567999999999998885533 48999998877777777777888988886 77778888877 77777788
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
+.+|-+ -+|.+...+. +||.|.+++.++-+|+-|||+|+.+.....
T Consensus 497 mLmEaC-lGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 497 MLMEAC-LGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred hhHHhh-cCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 888877 6777776662 799999999999999999999999865543
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
..+.+||+.| ..+|.||+||+++||+||++||.....+... ..+..-+|.- ..+.
T Consensus 576 -TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY------n~ILkGid~i------~~Pr 642 (732)
T KOG0614|consen 576 -TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY------NLILKGIDKI------EFPR 642 (732)
T ss_pred -eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH------HHHHhhhhhh------hccc
Confidence 4568999999 6799999999999999999999865443221 1111112211 1111
Q ss_pred HHHHHHHHHHHhhccCCCCCc
Q 037624 365 RDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~R 385 (408)
.-.+...+++..-+..+|.+|
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ER 663 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTER 663 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhh
Confidence 223334456666678899999
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-19 Score=162.95 Aligned_cols=200 Identities=15% Similarity=0.225 Sum_probs=138.1
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeee
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLS 236 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~ 236 (408)
.++....+.+....++-+|.||.||+|.+. +.+.|-||.++.. .+.-+...|..|.-.+. .|+|+..+.+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 344445556777788999999999999663 3456778887642 33445667888888886 8888888888
Q ss_pred EeEeeecCC-ccchhhhhhcccchhhhhhhc-----------------------------------------cCcccccc
Q 037624 237 FMDFVCIKD-ACFWFMNTWRGEACSVFCTMI-----------------------------------------MKPLSWIG 274 (408)
Q Consensus 237 ~~~~~~~~~-~~~~lv~e~~~~~g~l~~~l~-----------------------------------------~k~~~~~l 274 (408)
. +.++ ...++.|.++ .-|+|..++. +...|-.+
T Consensus 355 V----~ie~~~~P~V~y~~~-~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI 429 (563)
T KOG1024|consen 355 V----SIEDYATPFVLYPAT-GVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI 429 (563)
T ss_pred E----EeeccCcceEEEecc-CcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee
Confidence 7 5554 4566777777 5777777763 22334457
Q ss_pred ccCCceEEeecccccccCCCCCeeeecccCC-----C-----------C-cccchhhhhHHHHHHHh-CCCCCccccccc
Q 037624 275 LRELEAFVADFGMTMHLYCDSSNLTLLAGTY-----G-----------Y-EKCDVYSFGVVALEILM-GRQPGELLSSLS 336 (408)
Q Consensus 275 ~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~-----~-----------y-~k~DVySfGvvl~Ellt-g~~p~~~~~~~~ 336 (408)
++..++|++|=.++|.+-+.+.+. .|.- . | ..+|||||||+||||+| |+.|+.+.+..
T Consensus 430 dd~LqVkltDsaLSRDLFP~DYhc---LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf- 505 (563)
T KOG1024|consen 430 DDQLQVKLTDSALSRDLFPGDYHC---LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF- 505 (563)
T ss_pred hhheeEEeccchhccccCcccccc---cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH-
Confidence 788999999999999875543321 1111 1 1 78999999999999999 99998654322
Q ss_pred CCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+...+-...+- ..+..|+.++..++.-||+..|++|++
T Consensus 506 ---------Em~~ylkdGyRl---aQP~NCPDeLf~vMacCWallpeeRPs 544 (563)
T KOG1024|consen 506 ---------EMEHYLKDGYRL---AQPFNCPDELFTVMACCWALLPEERPS 544 (563)
T ss_pred ---------HHHHHHhcccee---cCCCCCcHHHHHHHHHHHhcCcccCCC
Confidence 122222222221 223467788999999999999999955
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-19 Score=180.88 Aligned_cols=109 Identities=23% Similarity=0.332 Sum_probs=75.0
Q ss_pred cCccccccccCCceEEeecccccccC------------------CCCCeeeecccCCCC---------------cccchh
Q 037624 267 MKPLSWIGLRELEAFVADFGMTMHLY------------------CDSSNLTLLAGTYGY---------------EKCDVY 313 (408)
Q Consensus 267 ~k~~~~~l~~~~~~ki~DfGla~~~~------------------~~~~~~~~~~gt~~y---------------~k~DVy 313 (408)
+||.||.++++..+||+|||+|+... .+....|..+||.-| .|+|+|
T Consensus 723 LKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmY 802 (1351)
T KOG1035|consen 723 LKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMY 802 (1351)
T ss_pred CCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhH
Confidence 79999999999999999999998721 011123567888877 799999
Q ss_pred hhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 314 SFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 314 SfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
|+|||++||+. ||.. .+.....+...-++.++.+ ..+..++...-.+++.+-++.||.+|++
T Consensus 803 SLGIVlFEM~y---PF~T--------sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPt 864 (1351)
T KOG1035|consen 803 SLGIVLFEMLY---PFGT--------SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPT 864 (1351)
T ss_pred HHHHHHHHHhc---cCCc--------hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCC
Confidence 99999999996 4542 1222223444445555543 1223334444567778889999999955
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-19 Score=169.73 Aligned_cols=150 Identities=20% Similarity=0.228 Sum_probs=118.8
Q ss_pred ceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 177 KYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.++||+|-||+||-|.. ++|+.||||.+.+.+-.. ....+..+|+.+|. .||.+|++-.. +...+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l~HPGiV~le~M----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNLHHPGIVNLECM----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCC-chHHHHHHHHHHHHhcCCCCeeEEEEe----ecCCceEEEEeh
Confidence 47899999999999998 569999999998765443 33478899999997 78888877666 888888899998
Q ss_pred hcccchhhhhhh-----------------------------------ccCcccccccc---CCceEEeecccccccCCCC
Q 037624 254 WRGEACSVFCTM-----------------------------------IMKPLSWIGLR---ELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 254 ~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~---~~~~ki~DfGla~~~~~~~ 295 (408)
-+ +|+..+.+ ++||.|+++.+ --++||+|||+||.+...
T Consensus 644 Kl--~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk- 720 (888)
T KOG4236|consen 644 KL--HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK- 720 (888)
T ss_pred hh--cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-
Confidence 76 23333222 17899998872 247999999999998643
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccccc
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSS 334 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~ 334 (408)
+....++||+.| ..-|+||.|||+|--++|.-||.+..+
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd 771 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED 771 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc
Confidence 345668999999 456999999999999999999976543
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-19 Score=180.29 Aligned_cols=155 Identities=20% Similarity=0.285 Sum_probs=92.5
Q ss_pred HHhhcccceeecccceeEEEEEEeC-C----CcEEEEEecccccCCCcchhhHHHHHHHHhcccCCccee-eeEeEee-e
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-S----SKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETL-LSFMDFV-C 242 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l-~~~~~~~-~ 242 (408)
..++|...+.||+|+||.||+|++. + +..||||++.... ..+.+..|......+.++... .++.... +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNERVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHHHHHhhchhhHHHHHHhhhccccc
Confidence 5678999999999999999999984 4 6899999986421 112222221100011111111 1110000 1
Q ss_pred cCCccchhhhhhcccchhhhhhh-----------------------------------------------------ccCc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM-----------------------------------------------------IMKP 269 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l-----------------------------------------------------~~k~ 269 (408)
..+...++++||+ ++++|.+++ ++||
T Consensus 205 ~~~~~~~LV~ey~-~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 205 KKEDEYWLVWRYE-GESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred ccCCceEEEEEec-CCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 2333445555555 444332211 2789
Q ss_pred ccccccc-CCceEEeecccccccCCCCCe-eeecccCCCC----------------------------------cccchh
Q 037624 270 LSWIGLR-ELEAFVADFGMTMHLYCDSSN-LTLLAGTYGY----------------------------------EKCDVY 313 (408)
Q Consensus 270 ~~~~l~~-~~~~ki~DfGla~~~~~~~~~-~~~~~gt~~y----------------------------------~k~DVy 313 (408)
.|+++++ ++.+||+|||+|+.+...... .....||+.| .++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999985 689999999999865332111 1233445444 245999
Q ss_pred hhhHHHHHHHhCCCCCc
Q 037624 314 SFGVVALEILMGRQPGE 330 (408)
Q Consensus 314 SfGvvl~Elltg~~p~~ 330 (408)
||||+||||+++..|++
T Consensus 364 SlGviL~el~~~~~~~~ 380 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSD 380 (566)
T ss_pred HHHHHHHHHHhCcCCCc
Confidence 99999999999877754
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=154.31 Aligned_cols=209 Identities=19% Similarity=0.256 Sum_probs=144.4
Q ss_pred cHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEe
Q 037624 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFM 238 (408)
Q Consensus 163 ~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~ 238 (408)
+++|+.+-|+ +.||+|+|+.|--+.. .+|..+|||++.+ +....+....+|++++. .|+|++.++.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidK---q~gHsR~RvfREVe~f~~Cqgh~nilqLief- 144 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDK---QPGHSRSRVFREVETFYQCQGHKNILQLIEF- 144 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhc---CCchHHHHHHHHHHHHHHhcCCccHHHHHHH-
Confidence 4778888886 5699999999998874 7899999999975 34556778899999998 78888888888
Q ss_pred EeeecCCccchhhhhhcccchhhhhhhc---------------------------------cCcccccccc---CCceEE
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR---ELEAFV 282 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~---~~~~ki 282 (408)
+.++..+|+|+|-| .+|++..++. +||.|++-.+ ---+||
T Consensus 145 ---FEdd~~FYLVfEKm-~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 145 ---FEDDTRFYLVFEKM-RGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ---hcccceEEEEEecc-cCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceee
Confidence 88899999999999 9999988873 6888887552 235799
Q ss_pred eecccccccCCCC-------CeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccC-
Q 037624 283 ADFGMTMHLYCDS-------SNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSS- 337 (408)
Q Consensus 283 ~DfGla~~~~~~~-------~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~- 337 (408)
+||.|..-+.... ....+.+|+..| .++|.||+|||||-|++|..||...-..+-
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 9999875432111 112345666655 789999999999999999999964322111
Q ss_pred Cc-----cccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 338 SS-----SSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 338 ~~-----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
|. ..-+......|-+....-|. ..+........+++..-+-.+|.+|
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPd-kdWahIS~eakdlisnLlvrda~~r 352 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPD-KDWAHISSEAKDLISNLLVRDAKQR 352 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCCh-hhhHHhhHHHHHHHHHHHhccHHhh
Confidence 10 11112222333343332221 2222222333344455566888888
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-18 Score=167.31 Aligned_cols=157 Identities=14% Similarity=0.254 Sum_probs=101.1
Q ss_pred HHhhcccceeecccceeEEEEEEe-----------------CCCcEEEEEecccccCCCcchhhHHH-------------
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-----------------TSSKVIALKKLHHWENEEPASTRSFQ------------- 219 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-----------------~~g~~vAvK~~~~~~~~~~~~~~~~~------------- 219 (408)
.+++|+..++||+|+||+||+|.. .+++.||||++..... ...++|.
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~---~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ---GVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch---hhHHHHHhhhhhhhcccchh
Confidence 367899999999999999999964 2356799999864221 1223343
Q ss_pred -HHHHHhc--ccCC-----cceeeeEeEee----ecCCccchhhhhhcccchhhhhhhc---------------------
Q 037624 220 -NEVDILY--PKYD-----IETLLSFMDFV----CIKDACFWFMNTWRGEACSVFCTMI--------------------- 266 (408)
Q Consensus 220 -~E~~~l~--~~~n-----~~~l~~~~~~~----~~~~~~~~lv~e~~~~~g~l~~~l~--------------------- 266 (408)
.|+.++. +|.+ .+++++++... .......++|+||+ ++++|.++++
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~-~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~ 298 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFE-SDATLGDALDGKLGPFPGCLEEFMMAGKKIP 298 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcC-CCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence 3444443 2332 24455552211 11234678999999 7777755431
Q ss_pred ------------------------------------cCccccccccCCceEEeecccccccCCCCCee-eecccCCCC--
Q 037624 267 ------------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL-TLLAGTYGY-- 307 (408)
Q Consensus 267 ------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~-~~~~gt~~y-- 307 (408)
+||.|++++.++.+||+|||+++......... ....+|+.|
T Consensus 299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 299 DNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred hhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 57778888888999999999997653221110 011123333
Q ss_pred --------------------------------cccchhhhhHHHHHHHhCCC-CCc
Q 037624 308 --------------------------------EKCDVYSFGVVALEILMGRQ-PGE 330 (408)
Q Consensus 308 --------------------------------~k~DVySfGvvl~Elltg~~-p~~ 330 (408)
.+.||||+||+++||++|.. |+.
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 24699999999999999875 664
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-18 Score=144.51 Aligned_cols=156 Identities=22% Similarity=0.306 Sum_probs=109.6
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..++......||+|++|.|-+-++ .+|+..|||++...- ..+..+...+|+.+..+....+..+.||+.. ......
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~-~regdv 120 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL-FREGDV 120 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhh-hccccE
Confidence 334444556799999999988877 679999999998643 2345567888998876665666666666643 344445
Q ss_pred hhhhhhcccchhhhhhh--------------------------------------ccCccccccccCCceEEeecccccc
Q 037624 249 WFMNTWRGEACSVFCTM--------------------------------------IMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l--------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
++-||.|+. |+..+. ++||.|++++.++++|+||||.+-.
T Consensus 121 wIcME~M~t--Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 121 WICMELMDT--SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EEeHHHhhh--hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 566666521 111111 2799999999999999999999977
Q ss_pred cCCCCCeeeecccCC---------------CC-cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTY---------------GY-EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~---------------~y-~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+...- ..+...|.. +| -||||||+|+.+.||.+++.||+.
T Consensus 199 L~dSi-Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 199 LVDSI-AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred ehhhh-HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 64221 111122332 45 799999999999999999999973
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.74 E-value=8e-18 Score=151.82 Aligned_cols=172 Identities=15% Similarity=0.151 Sum_probs=117.1
Q ss_pred cceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcccch
Q 037624 183 GGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRGEAC 259 (408)
Q Consensus 183 G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g 259 (408)
|.||.||+++. .+++.+|+|++.... .+.+|...+. .|+|++++.++ +......++++||+ +++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~lv~e~~-~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKY----IVSEDSVFLVLQHA-EGG 70 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhh----eecCCeEEEEEecC-CCC
Confidence 88999999998 458899999997532 1223333222 67888887777 66777889999999 888
Q ss_pred hhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeecccCCC
Q 037624 260 SVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYG 306 (408)
Q Consensus 260 ~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~ 306 (408)
+|.+++. ++|.|++++.++.++++|||.+........ ...++..
T Consensus 71 ~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~ 147 (237)
T cd05576 71 KLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD---GEAVENM 147 (237)
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc---cCCcCcc
Confidence 8876651 688888999999999999998765533211 1112222
Q ss_pred C------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHH
Q 037624 307 Y------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTIL 374 (408)
Q Consensus 307 y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~ 374 (408)
| .++||||+||+++||++|+.|++..... ........+.. .....+.+++
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------~~~~~~~~~~~-------~~~~~~~~li 209 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------INTHTTLNIPE-------WVSEEARSLL 209 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------cccccccCCcc-------cCCHHHHHHH
Confidence 2 5799999999999999999886532110 00000011111 1123456788
Q ss_pred HhhccCCCCCcCCC
Q 037624 375 FACLRSNPKTPMQK 388 (408)
Q Consensus 375 ~~C~~~~P~~Rm~~ 388 (408)
..|++.||++|+++
T Consensus 210 ~~~l~~dp~~R~~~ 223 (237)
T cd05576 210 QQLLQFNPTERLGA 223 (237)
T ss_pred HHHccCCHHHhcCC
Confidence 89999999999554
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-18 Score=151.81 Aligned_cols=186 Identities=20% Similarity=0.288 Sum_probs=128.0
Q ss_pred ceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcccchh
Q 037624 184 GYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACS 260 (408)
Q Consensus 184 ~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~ 260 (408)
+||.||+|+..+ |+.+|+|++...... ...+.+.+|++.+. +|+|++++.++ +......++++||. ++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~~~~i~~~~~~----~~~~~~~~l~~e~~-~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK--KKRERILREISILKKLKHPNIVRLYDV----FEDEDKLYLVMEYC-DGGD 73 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc--cHHHHHHHHHHHHHhCCCCcHHHHHhh----eeeCCEEEEEEeCC-CCCC
Confidence 589999999964 889999998753221 11578999999886 88888888888 77777888899998 7777
Q ss_pred hhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCeeeecccCCCC
Q 037624 261 VFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY 307 (408)
Q Consensus 261 l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y 307 (408)
|..++. +++.|+++++++.++++|||.+....... ......|+..|
T Consensus 74 L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~ 152 (244)
T smart00220 74 LFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEY 152 (244)
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCC
Confidence 776652 45667778888999999999998765431 12223344444
Q ss_pred ------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHH
Q 037624 308 ------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILF 375 (408)
Q Consensus 308 ------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 375 (408)
.++||||||++++|+++|+.|+..... .....+.......... .........+.+++.
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~ 222 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ---------LLELFKKIGKPKPPFP-PPEWKISPEAKDLIR 222 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHhccCCCCc-cccccCCHHHHHHHH
Confidence 689999999999999999999864211 1111111111111100 000003346778899
Q ss_pred hhccCCCCCcCC
Q 037624 376 ACLRSNPKTPMQ 387 (408)
Q Consensus 376 ~C~~~~P~~Rm~ 387 (408)
.|+..+|++|++
T Consensus 223 ~~l~~~p~~Rp~ 234 (244)
T smart00220 223 KLLVKDPEKRLT 234 (244)
T ss_pred HHccCCchhccC
Confidence 999999999954
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-18 Score=165.64 Aligned_cols=192 Identities=18% Similarity=0.231 Sum_probs=132.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
+++|.....+|.|+|+.|-++.. ++++..|||++.... .+-.+|+.++. .|+|++++.+. +.++.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v----~~~~~ 389 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDV----YEDGK 389 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecce----ecCCc
Confidence 67788888899999999999987 557889999997641 22334554443 78888888888 88888
Q ss_pred cchhhhhhcccchhhhhhhc--------------------------------cCcccccc-ccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIG-LRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l-~~~~~~ki~DfGla~~~~~ 293 (408)
..++|+|.+ .++-+.+.+. ++|.|+++ .+.++++|+|||.++....
T Consensus 390 ~~~~v~e~l-~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 390 EIYLVMELL-DGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeeeeehhc-cccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999998 5554444331 78999999 5899999999999998765
Q ss_pred C--CCee------eecccCCCC-cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 294 D--SSNL------TLLAGTYGY-EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 294 ~--~~~~------~~~~gt~~y-~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
+ .... ..+.+-.+| +.+|+||+||+||||+||+.|+..... +......+-.+... ....
T Consensus 469 ~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~--------~~ei~~~i~~~~~s----~~vS 536 (612)
T KOG0603|consen 469 SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA--------GIEIHTRIQMPKFS----ECVS 536 (612)
T ss_pred hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc--------hHHHHHhhcCCccc----cccC
Confidence 4 1111 112223344 899999999999999999999864321 11111112222111 1122
Q ss_pred HHHHHHHHHHHhhccCCCCCc--CCCc
Q 037624 365 RDIVLVSTILFACLRSNPKTP--MQKP 389 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~R--m~~~ 389 (408)
++ ..+|...|++.||.+| |.+.
T Consensus 537 ~~---AKdLl~~LL~~dP~~Rl~~~~i 560 (612)
T KOG0603|consen 537 DE---AKDLLQQLLQVDPALRLGADEI 560 (612)
T ss_pred HH---HHHHHHHhccCChhhCcChhhh
Confidence 33 3466678999999999 5543
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-17 Score=158.87 Aligned_cols=154 Identities=22% Similarity=0.299 Sum_probs=118.6
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
-|...+.||-|+||+|..++- +....+|.|.+++.+............|-.||+ ...=+|+|+-. +.+.+..|
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS----FQDkdnLY 705 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS----FQDKDNLY 705 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE----eccCCceE
Confidence 366788999999999999975 446678999998755443334445677888886 44445665554 67788899
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc-----
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL----- 291 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~----- 291 (408)
+||+|+ ++|++...|. +||.|+++|.||++|+.||||+.-+
T Consensus 706 FVMdYI-PGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 706 FVMDYI-PGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred EEEecc-CCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccc
Confidence 999999 9999888773 8999999999999999999998532
Q ss_pred ----CCCCC---------------------------------eeeecccCCCC------------cccchhhhhHHHHHH
Q 037624 292 ----YCDSS---------------------------------NLTLLAGTYGY------------EKCDVYSFGVVALEI 322 (408)
Q Consensus 292 ----~~~~~---------------------------------~~~~~~gt~~y------------~k~DVySfGvvl~El 322 (408)
...+. .....+||..| .-+|.||.||||+||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 10000 01236899988 678999999999999
Q ss_pred HhCCCCCcc
Q 037624 323 LMGRQPGEL 331 (408)
Q Consensus 323 ltg~~p~~~ 331 (408)
+.|+.||-.
T Consensus 865 ~~g~~pf~~ 873 (1034)
T KOG0608|consen 865 LVGQPPFLA 873 (1034)
T ss_pred hhCCCCccC
Confidence 999999853
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-18 Score=148.67 Aligned_cols=151 Identities=21% Similarity=0.286 Sum_probs=109.8
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC----
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD---- 245 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~---- 245 (408)
.|....+||+|.||.||+|+.. .|+.||+|++-.. ++....-..-.+|+++|. +|+|+++++.. |...
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme-neKeGfpitalreikiL~~lkHenv~nliEi----c~tk~Tp~ 92 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME-NEKEGFPITALREIKILQLLKHENVVNLIEI----CRTKATPT 92 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh-ccccCCcHHHHHHHHHHHHhcchhHHHHHHH----HhhccCCc
Confidence 4555678999999999999985 4778999987653 233344456688999987 79999999887 5432
Q ss_pred ----ccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeeccc
Q 037624 246 ----ACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 246 ----~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGl 287 (408)
...++|+.++ +. +|.-.+ ++|+.|++++.++..||+|||+
T Consensus 93 ~r~r~t~ylVf~~c-eh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 93 NRDRATFYLVFDFC-EH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ccccceeeeeHHHh-hh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 2367777776 22 121111 2789999999999999999999
Q ss_pred ccccCCCCC----eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 288 TMHLYCDSS----NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 288 a~~~~~~~~----~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
+|.+..... ..+..+-|.+| .+.|||.-|||+.||.||.+-+.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 987753321 12333445555 78999999999999999987654
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.3e-18 Score=149.25 Aligned_cols=152 Identities=20% Similarity=0.291 Sum_probs=111.5
Q ss_pred HhhcccceeecccceeEEEEEEeCC-----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
...|+....||+|.||.||+|.-.+ ...+|+|+++.++.. .....+..+|+.++. +|+|++.++.. ..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~-tGiS~SAcREiaL~REl~h~nvi~Lv~V----fl 97 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG-TGISMSACREIALLRELKHPNVISLVKV----FL 97 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC-CCcCHHHHHHHHHHHHhcCCcchhHHHH----Hh
Confidence 3467888899999999999996532 237899999875433 344566778999887 89999998887 55
Q ss_pred C-Cccchhhhhhcccchhhhhhhc--------------------------------------cCccccccccC----Cce
Q 037624 244 K-DACFWFMNTWRGEACSVFCTMI--------------------------------------MKPLSWIGLRE----LEA 280 (408)
Q Consensus 244 ~-~~~~~lv~e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~----~~~ 280 (408)
+ +...++++||. + .+|...++ +||.|+++..+ |.+
T Consensus 98 ~~d~~v~l~fdYA-E-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 98 SHDKKVWLLFDYA-E-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred ccCceEEEEehhh-h-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCee
Confidence 5 67788888886 3 23443331 78889888755 999
Q ss_pred EEeecccccccCCCCCe---eeecccCCC------------C-cccchhhhhHHHHHHHhCCCCC
Q 037624 281 FVADFGMTMHLYCDSSN---LTLLAGTYG------------Y-EKCDVYSFGVVALEILMGRQPG 329 (408)
Q Consensus 281 ki~DfGla~~~~~~~~~---~~~~~gt~~------------y-~k~DVySfGvvl~Elltg~~p~ 329 (408)
||+|||++|.+...-.. ...++-|++ | .+.||||.|||..||+|-++-|
T Consensus 176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF 240 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLF 240 (438)
T ss_pred EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccc
Confidence 99999999987543211 122333444 4 6789999999999999976655
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.5e-17 Score=164.57 Aligned_cols=90 Identities=40% Similarity=0.609 Sum_probs=43.6
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|.+|++|++|+.|+|++|+|+|.+|..++.+++| .|||++|+|+|.+|..+++|++|+.|+|++|+++|.+|..++.+
T Consensus 434 ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~ 513 (623)
T PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGR 513 (623)
T ss_pred CCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhc
Confidence 34444444555555555555554555444445555 45555555554555444555555555555555555555444432
Q ss_pred c--cceeEeeccc
Q 037624 81 P--LSYLDLSFND 91 (408)
Q Consensus 81 ~--l~~l~l~~n~ 91 (408)
. +..+++++|.
T Consensus 514 ~~~~~~l~~~~N~ 526 (623)
T PLN03150 514 LLHRASFNFTDNA 526 (623)
T ss_pred cccCceEEecCCc
Confidence 2 3444444444
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-17 Score=164.07 Aligned_cols=187 Identities=21% Similarity=0.269 Sum_probs=123.7
Q ss_pred cccceeecccceeE-EEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccch
Q 037624 174 FDIKYCFGTGGYGS-VYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 174 f~~~~~iG~G~~G~-Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
|...+++|.|+.|+ ||+|.+ +|+.||||++-.+ ...-..+|+..|. .|+|+++.++. ..+....|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~----E~d~qF~Y 579 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCS----EQDRQFLY 579 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEee----ccCCceEE
Confidence 45567799999875 699999 6889999999642 2334578999998 55555554444 44445556
Q ss_pred hhhhhcccchhhhhhh-------------------------------------ccCcccccccc-----CCceEEeeccc
Q 037624 250 FMNTWRGEACSVFCTM-------------------------------------IMKPLSWIGLR-----ELEAFVADFGM 287 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l-------------------------------------~~k~~~~~l~~-----~~~~ki~DfGl 287 (408)
+..|.+ ..+|.+++ ++||.|+++.. ..+|+|+|||+
T Consensus 580 IalELC--~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 580 IALELC--ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred EEehHh--hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccc
Confidence 555554 22333322 16999999873 36899999999
Q ss_pred ccccCCCCCe---eeecccCCCC------------cccchhhhhHHHHHHHhC-CCCCcccccccCCccccccchhhhcc
Q 037624 288 TMHLYCDSSN---LTLLAGTYGY------------EKCDVYSFGVVALEILMG-RQPGELLSSLSSSSSSDQNIMLLDVL 351 (408)
Q Consensus 288 a~~~~~~~~~---~~~~~gt~~y------------~k~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 351 (408)
++.+..+.+. ..+..||.|| ..+|+||+|||++..+|| ..||......+.- -+....
T Consensus 658 sKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N-------Il~~~~ 730 (903)
T KOG1027|consen 658 SKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN-------ILTGNY 730 (903)
T ss_pred ccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh-------hhcCcc
Confidence 9998766544 3567899999 678999999999999995 9999743211100 000000
Q ss_pred C-CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 352 D-PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 352 d-~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+ ..+.+. .++ ...+|+-+.++.+|..|++
T Consensus 731 ~L~~L~~~-----~d~--eA~dLI~~ml~~dP~~RPs 760 (903)
T KOG1027|consen 731 TLVHLEPL-----PDC--EAKDLISRMLNPDPQLRPS 760 (903)
T ss_pred ceeeeccC-----chH--HHHHHHHHhcCCCcccCCC
Confidence 0 011110 112 4567888899999999933
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.3e-17 Score=152.75 Aligned_cols=153 Identities=20% Similarity=0.289 Sum_probs=124.5
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcch-----hhHHHHHHHHhc-----ccCCcceeeeEeEe
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPAS-----TRSFQNEVDILY-----PKYDIETLLSFMDF 240 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~-----~~~~~~E~~~l~-----~~~n~~~l~~~~~~ 240 (408)
.+|...+.+|+|+||.|+.|.++. ...|+||.+.+++.-.... .-....||++|+ .|+|+++++.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf--- 637 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF--- 637 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe---
Confidence 357888999999999999999854 5679999998755322111 123568999997 59999999999
Q ss_pred eecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
+.+++.+++++|-.+++-+|++++. +|..|++++.+|-+|+.|||-
T Consensus 638 -FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 638 -FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred -eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 8899999999999988889998884 677888899999999999998
Q ss_pred ccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 288 TMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
|..... ......+||.+| ..-|||++||+||-++....||.
T Consensus 717 aa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 876532 234567889888 56899999999999999999975
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-16 Score=136.31 Aligned_cols=151 Identities=25% Similarity=0.387 Sum_probs=111.1
Q ss_pred cccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ...+.+.+|++.+. +|+|+++++++ +......++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~----~~~~~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGV----FEDPEPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheee----eecCCceEE
Confidence 4456889999999999999965 889999999753211 24678888998876 78888887777 666677888
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC-
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS- 295 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~- 295 (408)
++|++ ++++|.+++. +++.|++++.++.++|+|||.+.......
T Consensus 75 v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 75 VMEYC-EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred EEecc-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 88888 6667666542 34555567777999999999998765432
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.......++..| .++||||||++++||++|+.||+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 001111222222 589999999999999999999864
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-16 Score=151.75 Aligned_cols=197 Identities=19% Similarity=0.288 Sum_probs=139.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
-++|+....+|.|.||.|||++. ..++..|||.++.....+ ..-...|+-++. +|+|++..+|- +.....
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gs----ylr~dk 86 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGS----YLRRDK 86 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhh----hhhhcC
Confidence 35788889999999999999997 568899999998654332 444567777776 88888888887 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++.|||+ .+|+|.+..+ +|..|+++.+.+.+|++|||.+..+...
T Consensus 87 lwicMEyc-gggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 87 LWICMEYC-GGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred cEEEEEec-CCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhh
Confidence 89999999 7888776542 6778888999999999999998766432
Q ss_pred CCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC-CCCCc
Q 037624 295 SSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP-RLSPP 358 (408)
Q Consensus 295 ~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~ 358 (408)
-.......||+.| .++|||+.|+...|+---+.|.......+....+ ...-.+| .+..+
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm-----TkS~~qpp~lkDk 240 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM-----TKSGFQPPTLKDK 240 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh-----hccCCCCCcccCC
Confidence 2223446788766 8999999999999999888884332222110000 0111222 22211
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
......+-+++..|+-++|++|
T Consensus 241 -----~kws~~fh~fvK~altknpKkR 262 (829)
T KOG0576|consen 241 -----TKWSEFFHNFVKGALTKNPKKR 262 (829)
T ss_pred -----ccchHHHHHHHHHHhcCCCccC
Confidence 1222334466677999999999
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.8e-16 Score=133.15 Aligned_cols=152 Identities=16% Similarity=0.296 Sum_probs=109.9
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccch
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.+.|+..+.+|+|.||.+-.+.++ ..+.+++|-+.... .-.++|.+|...-..-..|.+++..|+..+...+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 356788899999999999999985 46789999886532 2357899998753322223345556666677777888
Q ss_pred hhhhhcccchhhhhhhc--------------------------------cCccccccc--cCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI--------------------------------MKPLSWIGL--RELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~--~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||. +.|+|.+-+. +|..|+++- +..++|++|||+++.....-
T Consensus 99 F~qE~a-P~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 99 FVQEFA-PRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred EeeccC-ccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 999999 8888887662 677777765 55689999999987643211
Q ss_pred CeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 296 SNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 296 ~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
....-+..| ..+|||.||||++..+||+.|+.
T Consensus 178 ---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 178 ---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred ---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 001111112 57899999999999999999986
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-16 Score=135.63 Aligned_cols=149 Identities=21% Similarity=0.271 Sum_probs=108.4
Q ss_pred ccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC-----c
Q 037624 175 DIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD-----A 246 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~-----~ 246 (408)
+..+.||-|+||.||..+. ++|+.||.|++.... .+-...+.+.+|+++|. +|.|+...+.. .... .
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDI----LQPph~dfFq 130 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDI----LQPANPSFFQ 130 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHh----cCCCCchHHH
Confidence 3357899999999999998 569999999986532 23344567889999997 88887776655 2222 2
Q ss_pred cchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
+.|++.|.| + .+|+..+ ++||-|.++..+-..||+|||+||.-..
T Consensus 131 EiYV~TELm-Q-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 131 ELYVLTELM-Q-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHH-H-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 456777776 2 2333322 2788898999999999999999997654
Q ss_pred CCCe-ee------------ecccCCCC-cccchhhhhHHHHHHHhCCCCCc
Q 037624 294 DSSN-LT------------LLAGTYGY-EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 294 ~~~~-~~------------~~~gt~~y-~k~DVySfGvvl~Elltg~~p~~ 330 (408)
+... ++ ...|...| ...||||.|||..||+.+|.-|.
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 4321 22 23566666 78999999999999998887664
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-15 Score=138.49 Aligned_cols=150 Identities=20% Similarity=0.279 Sum_probs=99.0
Q ss_pred HhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCC-cceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYD-IETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n-~~~l~~~~~~~~~~ 244 (408)
++.|.....+|+|.||.|-++.... +..||||+++... .-.+.-+-|++++. ..|+ --..+...+++..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy- 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY- 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc-
Confidence 6778888999999999999998743 7899999997532 23455667888875 2222 1223333333222
Q ss_pred Cccchhhhhhcccchhhhhhh-----------------------------------ccCccccccc--------------
Q 037624 245 DACFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGL-------------- 275 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~-------------- 275 (408)
.+...+|+|.++ -|+++.+ ++||.|+++.
T Consensus 163 rghiCivfellG--~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 163 RGHICIVFELLG--LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred cCceEEEEeccC--hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence 223333444331 1222222 2789998732
Q ss_pred ------cCCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 276 ------RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 276 ------~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
.+..+||.|||-|+.-.... +.++.|..| ..+||||+||||.|+.||..-|.
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 35578999999998754333 446667766 89999999999999999998764
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-14 Score=126.00 Aligned_cols=156 Identities=25% Similarity=0.409 Sum_probs=114.0
Q ss_pred ecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhhcc
Q 037624 180 FGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTWRG 256 (408)
Q Consensus 180 iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~ 256 (408)
||+|++|.||++...+ ++.+++|++....... ..+.+.+|++.+. +|++++++.++ +......++++|+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~----~~~~~~~~~~~e~~- 73 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGV----FEDENHLYLVMEYC- 73 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeee----eecCCeEEEEEecC-
Confidence 6899999999999955 8899999987532211 3467889999887 77777777777 66667788888888
Q ss_pred cchhhhhhhc----------------------------------cCcccccccc-CCceEEeecccccccCCCCCeeeec
Q 037624 257 EACSVFCTMI----------------------------------MKPLSWIGLR-ELEAFVADFGMTMHLYCDSSNLTLL 301 (408)
Q Consensus 257 ~~g~l~~~l~----------------------------------~k~~~~~l~~-~~~~ki~DfGla~~~~~~~~~~~~~ 301 (408)
+++++..++. +++.|++++. +..++|+|||.+.............
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 74 EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 6667666542 4566677777 7999999999998664332001111
Q ss_pred ccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHH
Q 037624 302 AGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368 (408)
Q Consensus 302 ~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 368 (408)
.+...| .+.|+|++|++++|+ .
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------~ 188 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------P 188 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------H
Confidence 122222 679999999999999 3
Q ss_pred HHHHHHHhhccCCCCCcCC
Q 037624 369 LVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 369 ~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+++..|++.+|++|++
T Consensus 189 ~~~~~l~~~l~~~p~~R~~ 207 (215)
T cd00180 189 ELKDLIRKMLQKDPEKRPS 207 (215)
T ss_pred HHHHHHHHHhhCCcccCcC
Confidence 4567788899999999944
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.6e-15 Score=148.77 Aligned_cols=92 Identities=35% Similarity=0.552 Sum_probs=88.0
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
.++.|+|++|.|+|.+|.+++.+++| .|+|++|+|+|.+|..++++++|+.|||++|+++|.+|..++.++ |+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37899999999999999999999999 999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccccCCCccccc
Q 037624 89 FNDLSGGIPKHLTT 102 (408)
Q Consensus 89 ~n~l~g~~p~~~~~ 102 (408)
+|+++|.+|..+..
T Consensus 499 ~N~l~g~iP~~l~~ 512 (623)
T PLN03150 499 GNSLSGRVPAALGG 512 (623)
T ss_pred CCcccccCChHHhh
Confidence 99999999986543
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-14 Score=123.54 Aligned_cols=149 Identities=17% Similarity=0.196 Sum_probs=109.0
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee-cCC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC-IKD 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~-~~~ 245 (408)
.++|+..+.+|+|.++.|+.|.. .+.+.++||.++... .+...+|+++|. .++|++.++.. +. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~Di---V~Dp~S 107 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDI---VKDPES 107 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhh---hcCccc
Confidence 35788889999999999999985 567789999998632 467889999997 46666655544 22 233
Q ss_pred ccchhhhhhcccchhhhhhh------------------------------ccCccccccc-cCCceEEeecccccccCCC
Q 037624 246 ACFWFMNTWRGEACSVFCTM------------------------------IMKPLSWIGL-RELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l------------------------------~~k~~~~~l~-~~~~~ki~DfGla~~~~~~ 294 (408)
....+++||+ .+.+..... ++||.|++++ +.-..++.|+|+|....+.
T Consensus 108 ktpaLiFE~v-~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 108 KTPSLIFEYV-NNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred cCchhHhhhh-ccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 4567888887 554432221 2799999999 6678999999999987655
Q ss_pred CCeeeecccCCC------------C-cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYG------------Y-EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~------------y-~k~DVySfGvvl~Elltg~~p~~ 330 (408)
.... ..+.+.. | ..-|+|||||+|.+|+-.+.||-
T Consensus 187 ~eYn-VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 187 KEYN-VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234 (338)
T ss_pred ceee-eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence 4322 1122221 2 67899999999999999999974
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-14 Score=123.66 Aligned_cols=195 Identities=15% Similarity=0.216 Sum_probs=124.8
Q ss_pred ceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhhh
Q 037624 177 KYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
..+|.+.-.|..|+|+++.+ .+++|++.... ......++|..|.-.|. .|||+..+++. |.......++..|
T Consensus 195 ~tkl~e~hsgelwrgrwqgn-divakil~vr~-~t~risrdfneefp~lrifshpnilpvlga----cnsppnlv~isq~ 268 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGN-DIVAKILNVRE-VTARISRDFNEEFPALRIFSHPNILPVLGA----CNSPPNLVIISQY 268 (448)
T ss_pred hhhhccCCCcccccccccCc-chhhhhhhhhh-cchhhcchhhhhCcceeeecCCchhhhhhh----ccCCCCceEeeee
Confidence 34578888999999999654 45667765422 23344678999987776 99999999999 9999999999999
Q ss_pred cccchhhhhhhc-------------------------------------cCccccccccCCceEEe--ecccccc-----
Q 037624 255 RGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVA--DFGMTMH----- 290 (408)
Q Consensus 255 ~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~--DfGla~~----- 290 (408)
| +-|+|+..++ +....++++++++++|+ |--++-.
T Consensus 269 m-p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~ 347 (448)
T KOG0195|consen 269 M-PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRA 347 (448)
T ss_pred c-cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccc
Confidence 9 9999999885 22234457788888875 2111110
Q ss_pred cCCCCCe---eeecccCCCCcccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 291 LYCDSSN---LTLLAGTYGYEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 291 ~~~~~~~---~~~~~gt~~y~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
+.+.--. .........+..+|+|||.|++|||.|+.-||...+.+.- .. ....+-+.+.+++. ...
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec----gm-kialeglrv~ippg----is~-- 416 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC----GM-KIALEGLRVHIPPG----ISR-- 416 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----hh-hhhhccccccCCCC----ccH--
Confidence 0000000 0000001111789999999999999999999975443321 00 11123344444432 122
Q ss_pred HHHHHHHHhhccCCCCCc--CCCcc
Q 037624 368 VLVSTILFACLRSNPKTP--MQKPF 390 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~R--m~~~~ 390 (408)
.+.+++.-|+..||.+| ..+++
T Consensus 417 -hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 417 -HMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -HHHHHHHHHhcCCCCcCCCcceeh
Confidence 34456666999999999 44443
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.4e-13 Score=114.40 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=69.1
Q ss_pred CccccccccCCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc
Q 037624 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL 335 (408)
Q Consensus 268 k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~ 335 (408)
||.|++++.++.+|+ ||+++...... ..||..| .|+|||||||++|||+||+.||......
T Consensus 38 kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~ 110 (176)
T smart00750 38 KSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL 110 (176)
T ss_pred CcccEeEcCccceee--ccceEeecccc-----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 899999999999999 99998764322 2466666 6899999999999999999998643221
Q ss_pred cCCccccccchhhhccCCCCCC-ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSP-PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
... .. .+.....+.... ............+.+++..|++.+|++|++
T Consensus 111 ~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~ 158 (176)
T smart00750 111 SAI----LE-ILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA 158 (176)
T ss_pred cHH----HH-HHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC
Confidence 110 00 001111111000 000111111125788999999999999954
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.3e-13 Score=124.36 Aligned_cols=154 Identities=23% Similarity=0.279 Sum_probs=114.4
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
+....+.|...++||+|.|++||++++. ..+.||+|.+..... .....+|+++|. .+.|++++.++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~-- 103 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGC-- 103 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhh--
Confidence 4445667888999999999999999873 356899999976443 345788998887 77788888777
Q ss_pred eeecCCccchhhhhhcccchhhhhhh------------------------------ccCccccccc-cCCceEEeecccc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM------------------------------IMKPLSWIGL-RELEAFVADFGMT 288 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------~~k~~~~~l~-~~~~~ki~DfGla 288 (408)
...++...+|++|+ +.....+.. ++||.|++.. .-..-.|.|||+|
T Consensus 104 --~rnnd~v~ivlp~~-~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 104 --FRNNDQVAIVLPYF-EHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred --hccCCeeEEEeccc-CccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhH
Confidence 66777778888887 554433332 1788888877 5667889999999
Q ss_pred cccC-----------------C-CC---------C-----e--e----------eecccCCCC-------------cccc
Q 037624 289 MHLY-----------------C-DS---------S-----N--L----------TLLAGTYGY-------------EKCD 311 (408)
Q Consensus 289 ~~~~-----------------~-~~---------~-----~--~----------~~~~gt~~y-------------~k~D 311 (408)
.... + .. . . . ...+||+|| +++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 7211 0 00 0 0 0 124789998 7899
Q ss_pred hhhhhHHHHHHHhCCCCCc
Q 037624 312 VYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 312 VySfGvvl~Elltg~~p~~ 330 (408)
|||-|||++-+++++.||-
T Consensus 261 iws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred eeeccceeehhhccccccc
Confidence 9999999999999999973
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.6e-13 Score=144.15 Aligned_cols=102 Identities=45% Similarity=0.693 Sum_probs=67.0
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|.+++++++|++|+|++|.++|.+|..++++++| +|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+
T Consensus 156 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 235 (968)
T PLN00113 156 IPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGL 235 (968)
T ss_pred CChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcC
Confidence 45566666666666666666666666666666666 66666666666666666666666666666666666666666666
Q ss_pred c-cceeEeeccccccCCCcccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+ |+.|++++|++++.+|..+..+
T Consensus 236 ~~L~~L~L~~n~l~~~~p~~l~~l 259 (968)
T PLN00113 236 TSLNHLDLVYNNLTGPIPSSLGNL 259 (968)
T ss_pred CCCCEEECcCceeccccChhHhCC
Confidence 6 6666666666666666555443
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-12 Score=122.28 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=85.7
Q ss_pred HHHhhcccceeecccceeEEEEEEeC--CCcEEEEEecccccC--CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT--SSKVIALKKLHHWEN--EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~--~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
...++|...+.||+|+||+||+|... +++.||||++..... ......+.|.+|++++. +|+|++..+. + .
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~--~--~ 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLL--A--T 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEE--E--c
Confidence 34567999999999999999999874 577889998753211 12234567999999997 6777664221 1 1
Q ss_pred cCCccchhhhhhcccchhhhhhh--------------------------cc-CccccccccCCceEEeecccccccCC
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM--------------------------IM-KPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l--------------------------~~-k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
...+++|||+ ++++|.... ++ ||.|++++.++++||+|||+|+.+..
T Consensus 91 ---~~~~LVmE~~-~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 91 ---GKDGLVRGWT-EGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred ---CCcEEEEEcc-CCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 3467888998 776664221 17 89999999889999999999997654
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.1e-13 Score=124.88 Aligned_cols=158 Identities=16% Similarity=0.197 Sum_probs=95.1
Q ss_pred cHHHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--------ccCCcce
Q 037624 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--------PKYDIET 233 (408)
Q Consensus 163 ~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--------~~~n~~~ 233 (408)
-+.|+.. ..|......|+|-|++|.+|... .|..||||+|.... ...+.=+.|+++|. ...+.+.
T Consensus 425 ~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 425 RIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred ehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 3444443 45777788999999999999974 47799999997532 23444567777763 1111222
Q ss_pred eeeEeEeeecCCccchhhhhhcc-----------cc------------hhhhhhh-----------ccCccccccc-cCC
Q 037624 234 LLSFMDFVCIKDACFWFMNTWRG-----------EA------------CSVFCTM-----------IMKPLSWIGL-REL 278 (408)
Q Consensus 234 l~~~~~~~~~~~~~~~lv~e~~~-----------~~------------g~l~~~l-----------~~k~~~~~l~-~~~ 278 (408)
++.. +...+..++|+|-.. .+ ..|+-.| ++||.|+++. ...
T Consensus 499 l~r~----F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 499 LFRH----FKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHH----hhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 2222 112222222222210 00 0111111 3899999998 556
Q ss_pred ceEEeecccccccCCCCCee----------eecccCCCCcccchhhhhHHHHHHHhCCCCCc
Q 037624 279 EAFVADFGMTMHLYCDSSNL----------TLLAGTYGYEKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~~----------~~~~gt~~y~k~DVySfGvvl~Elltg~~p~~ 330 (408)
..||||||-|.....+.-+. ..+.|-+.-...|+||.||.||||.||+.-|.
T Consensus 575 iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred eeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 78999999987765433111 12333332278999999999999999987653
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-13 Score=111.97 Aligned_cols=84 Identities=33% Similarity=0.577 Sum_probs=44.2
Q ss_pred cCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
.++++++.|-||+|+++ .+|+.+..+.+| .|++++|+++ .+|.+++++++|+.|+++-|++. .+|..||.++ |+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 34445555555555555 455555555555 4555555555 55555555555555555555554 4555555555 555
Q ss_pred eEeeccccc
Q 037624 85 LDLSFNDLS 93 (408)
Q Consensus 85 l~l~~n~l~ 93 (408)
||+.+|+++
T Consensus 107 ldltynnl~ 115 (264)
T KOG0617|consen 107 LDLTYNNLN 115 (264)
T ss_pred hhccccccc
Confidence 555555544
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-12 Score=114.50 Aligned_cols=148 Identities=18% Similarity=0.219 Sum_probs=100.2
Q ss_pred cccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC-----
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD----- 245 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~----- 245 (408)
|...+.+|.|.- .|.-+.. -.+++||+|++...... ....+...+|..++. .|+|+++++.+ +....
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~---ftP~~~l~~~ 93 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNV---FTPQKTLEEF 93 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-Cccchhhhhhhhhhhhhcccceeeeeec---cCccccHHHH
Confidence 444566888877 4554443 24789999999765333 344566778998884 55555555544 32222
Q ss_pred ccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 246 ACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
...++|+|+|.. ++...+ ++||.|+.+..+...||.|||+|+.-..+
T Consensus 94 ~e~y~v~e~m~~--nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 94 QEVYLVMELMDA--NLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred HhHHHHHHhhhh--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence 357899999843 222221 17999999999999999999999865433
Q ss_pred CCeeee------------cccCCCC-cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTL------------LAGTYGY-EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~------------~~gt~~y-~k~DVySfGvvl~Elltg~~p~~ 330 (408)
-..+. ..|+. | +.+||||.||++.||++|+--|.
T Consensus 172 -~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 172 -FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred -cccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEec
Confidence 11222 23443 4 88999999999999999987654
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.2e-12 Score=111.86 Aligned_cols=150 Identities=10% Similarity=-0.029 Sum_probs=102.8
Q ss_pred HHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhH------HHHHHHHhc--ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRS------FQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~------~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
..++|...+++|.|+||.||.... ++..+|||.+.......+..... |.+|+..+. .|++++.+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999766 56689999997654333333333 578877665 788887776653211
Q ss_pred e----cCCccchhhhhhcccchhhhhhh-------------------------ccCccccccccCCceEEeecccccccC
Q 037624 242 C----IKDACFWFMNTWRGEACSVFCTM-------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 242 ~----~~~~~~~lv~e~~~~~g~l~~~l-------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
. .-....+++|||+ ++.+|.+.. +++|.|+++++++ +++.|||..+...
T Consensus 108 ~~~~~~~~~~~~lvmEyi-~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~ 185 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYI-EGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTA 185 (232)
T ss_pred ccccccccCCeEEEEEEE-CCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCccccc
Confidence 0 1124578899999 877775542 2789999999888 9999999987664
Q ss_pred CCCCeeeecccCCCC-cccchhhhhHHHHHHH
Q 037624 293 CDSSNLTLLAGTYGY-EKCDVYSFGVVALEIL 323 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-~k~DVySfGvvl~Ell 323 (408)
.+.... ...--..| .++|+|||||.+.-..
T Consensus 186 e~~a~d-~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 186 QRKAKD-RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred chhhHH-HHHHHhHhcccccccceeEeehHHH
Confidence 322111 01000112 6899999999886544
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.7e-11 Score=113.66 Aligned_cols=81 Identities=15% Similarity=0.235 Sum_probs=60.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc-------ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY-------PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-------~~~n~~~l~~~~~~~~~ 243 (408)
+.|...++||=|-|++||.|.. .+.+.||+|+.+... .-.+.-+.||++|. .+++--.++.+++.+..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 4677889999999999999987 557789999987532 23566789999986 36666677777777654
Q ss_pred C---Cccchhhhhhcc
Q 037624 244 K---DACFWFMNTWRG 256 (408)
Q Consensus 244 ~---~~~~~lv~e~~~ 256 (408)
. +....+|+|+.+
T Consensus 154 sGpNG~HVCMVfEvLG 169 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVLG 169 (590)
T ss_pred cCCCCcEEEEEehhhh
Confidence 4 346778888873
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.9e-13 Score=107.45 Aligned_cols=101 Identities=27% Similarity=0.403 Sum_probs=92.1
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCcccc-ccCCCccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK-GTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~-g~~p~~~~ 78 (408)
.+|+.|..|.+|+.|++++|++. .+|.+++++++| .|+++-|++. .+|..||+++.|+.|||++|+++ ..+|..|.
T Consensus 47 ~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff 124 (264)
T KOG0617|consen 47 VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFF 124 (264)
T ss_pred ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchh
Confidence 37999999999999999999999 999999999999 9999999999 99999999999999999999995 46899999
Q ss_pred ccc-cceeEeeccccccCCCccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
.+. |+.|+++.|.|. .+|...+++.
T Consensus 125 ~m~tlralyl~dndfe-~lp~dvg~lt 150 (264)
T KOG0617|consen 125 YMTTLRALYLGDNDFE-ILPPDVGKLT 150 (264)
T ss_pred HHHHHHHHHhcCCCcc-cCChhhhhhc
Confidence 999 999999999998 5666555543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-12 Score=133.25 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=63.6
Q ss_pred cCccccccc-------------------cCCceEEeecccccccCCCC----------------CeeeecccCCCC----
Q 037624 267 MKPLSWIGL-------------------RELEAFVADFGMTMHLYCDS----------------SNLTLLAGTYGY---- 307 (408)
Q Consensus 267 ~k~~~~~l~-------------------~~~~~ki~DfGla~~~~~~~----------------~~~~~~~gt~~y---- 307 (408)
+||.|+++. .++.+|++|||+++...... .......||+.|
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 899999984 35567788888876432100 001123577777
Q ss_pred --------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhcc
Q 037624 308 --------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLR 379 (408)
Q Consensus 308 --------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~ 379 (408)
.++|||||||+||||++|..|+...... .. ........+.. .........++..||+
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~------~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT------MS-SLRHRVLPPQI--------LLNWPKEASFCLWLLH 250 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH------HH-HHHHhhcChhh--------hhcCHHHHHHHHHhCC
Confidence 7899999999999999999886522100 00 00011111111 1122334577788999
Q ss_pred CCCCCc
Q 037624 380 SNPKTP 385 (408)
Q Consensus 380 ~~P~~R 385 (408)
++|.+|
T Consensus 251 ~~P~~R 256 (793)
T PLN00181 251 PEPSCR 256 (793)
T ss_pred CChhhC
Confidence 999999
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-11 Score=118.61 Aligned_cols=143 Identities=24% Similarity=0.323 Sum_probs=103.3
Q ss_pred eecccceeEEEEEEe----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhh
Q 037624 179 CFGTGGYGSVYIAQL----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
++|+|+||.|+.+.- ..|..+|.|.+++....... ......|-.++. .|+-++++--. ...+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~-~~~t~~er~il~~~~~~~f~v~lhya----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD-RTHTKQERIILAFVHNTPFLVKLHYA----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccc-ccccccHHHHHhhccCCCceeeeeee----eccccchhHh
Confidence 379999999987642 34777899988764322211 113334445554 35555555444 5666677788
Q ss_pred hhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCee
Q 037624 252 NTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL 298 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~ 298 (408)
.++. .+|.+..++. .|+.|++++.+|++|+.|||+++..-.....
T Consensus 76 ld~~-rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 76 LDFL-RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred hhhc-ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 8887 7777776662 6789999999999999999999986443322
Q ss_pred eecccCCCC----------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 299 TLLAGTYGY----------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 299 ~~~~gt~~y----------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+||.-| ..+|.|||||+++||+||-.||..
T Consensus 154 ---cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ---ccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 788888 679999999999999999999864
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-11 Score=119.29 Aligned_cols=90 Identities=34% Similarity=0.469 Sum_probs=82.4
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccc-cCCCCCCEEEccCccccccCCCccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEI-GNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~-~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
.||++|..|..|+.||||+|+|+ ..|..+..-.++ .||||+|++. +||..+ -+|.-|-+||||+|++. .+|+.+.
T Consensus 94 GiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~R 170 (1255)
T KOG0444|consen 94 GIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIR 170 (1255)
T ss_pred CCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHH
Confidence 38999999999999999999999 999999999999 9999999999 899865 58999999999999998 7888888
Q ss_pred ccc-cceeEeeccccc
Q 037624 79 VLP-LSYLDLSFNDLS 93 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~ 93 (408)
.+. |++|.||+|+|.
T Consensus 171 RL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 171 RLSMLQTLKLSNNPLN 186 (1255)
T ss_pred HHhhhhhhhcCCChhh
Confidence 888 999999999864
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-10 Score=99.48 Aligned_cols=157 Identities=19% Similarity=0.248 Sum_probs=109.0
Q ss_pred HHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHH---hcccCCcceeeeEeE
Q 037624 164 FGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDI---LYPKYDIETLLSFMD 239 (408)
Q Consensus 164 ~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~---l~~~~n~~~l~~~~~ 239 (408)
.+++..+ +.|...+.||+|+||.+|.|.. .+|..||||.=+.... ..+...|.++ |..-..++.+..+
T Consensus 8 ~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y-- 79 (341)
T KOG1163|consen 8 LEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHY-- 79 (341)
T ss_pred hhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhh--
Confidence 3444433 4688999999999999999986 7799999998653211 2344555554 3355566666666
Q ss_pred eeecCCccchhhhhhcccchhhhhhh----------------------------------ccCccccccc---cCCceEE
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGL---RELEAFV 282 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~---~~~~~ki 282 (408)
..+.....+||+..++ +|.+.. ++||.|.+.. .-....+
T Consensus 80 --~~e~~ynvlVMdLLGP--sLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 80 --GTEKDYNVLVMDLLGP--SLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred --ccccccceeeeeccCc--cHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEE
Confidence 6666666677776532 222111 2789988754 3456789
Q ss_pred eecccccccCCCCCee-------eecccCCCC------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 283 ADFGMTMHLYCDSSNL-------TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~-------~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.|||+|+...+..+.. ....||..| .+-|+=|.|-||...--|..|+...
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 9999999775433221 346788888 5779999999999999999998654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.4e-10 Score=98.16 Aligned_cols=30 Identities=27% Similarity=0.310 Sum_probs=27.4
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEecccc
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHW 207 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~ 207 (408)
..||+|+||.||+|..++|+.||||+++..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~ 32 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTS 32 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEec
Confidence 579999999999999988999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-09 Score=97.92 Aligned_cols=153 Identities=18% Similarity=0.249 Sum_probs=109.8
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchhh
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
+|...++||+|+||+.+.|+. -++++||||-=... ..-++...++ +--++|...+++++++-| -..+..-.+|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S~APQLrdEY-r~YKlL~g~~GIP~vYYF----GqeG~~NiLV 102 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-SEAPQLRDEY-RTYKLLGGTEGIPQVYYF----GQEGKYNILV 102 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc-CCcchHHHHH-HHHHHHcCCCCCCceeee----ccccchhhhh
Confidence 578889999999999999984 57899999975432 2223333333 334566678888887766 5566667788
Q ss_pred hhhcccc-hhhhhhh-------------------------------ccCccccccc-----cCCceEEeecccccccCCC
Q 037624 252 NTWRGEA-CSVFCTM-------------------------------IMKPLSWIGL-----RELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 252 ~e~~~~~-g~l~~~l-------------------------------~~k~~~~~l~-----~~~~~ki~DfGla~~~~~~ 294 (408)
+|..++. .+|+++. ++||.|+++. +...+.|.|||+|+.+...
T Consensus 103 idLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 103 IDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 8776432 1233322 1799999876 3456889999999987543
Q ss_pred CCee-------eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNL-------TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~-------~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.+.. ....||..| .+-|.=|+|-|.+..+-|..|+..
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 3221 346799999 578999999999999999999864
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-11 Score=110.14 Aligned_cols=98 Identities=34% Similarity=0.494 Sum_probs=88.3
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcccc-CCCCCCEEEccCccccccCCCccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIG-NLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~-~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+||+++|.|.+|.-|+|..|.+. .+| +|.+|..| .|+++.|++. .+|++++ .+++|.+|||.+|++. .+|.++.
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 48999999999999999999999 888 89999999 8999999998 8999888 7999999999999998 8999999
Q ss_pred ccc-cceeEeeccccccCCCcccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
-+. |..||+|+|.+++ +|.+++++
T Consensus 273 lLrsL~rLDlSNN~is~-Lp~sLgnl 297 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISS-LPYSLGNL 297 (565)
T ss_pred HhhhhhhhcccCCcccc-CCcccccc
Confidence 999 9999999999994 56667665
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.1e-10 Score=77.82 Aligned_cols=59 Identities=44% Similarity=0.529 Sum_probs=46.3
Q ss_pred ccCCeEeccCCccccCCC-hhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccc
Q 037624 10 RNLVSLYLSGNNLTGSIP-SSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p-~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~ 69 (408)
++|++|+|++|+++ .+| ..|..+++| +|+|++|+++..-|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 46888888888888 455 567778888 888888888855556778888888888888875
|
... |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.94 E-value=9e-11 Score=113.33 Aligned_cols=99 Identities=30% Similarity=0.418 Sum_probs=81.0
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||.++-.|.||..+|||.|+|. .+|+.+.++.+| .||||+|+++ .+....+...+|++|+||+|+++ .+|+.+..+
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 7888889999999999999998 889999999999 8999988888 77777777788888888888888 778888888
Q ss_pred c-cceeEeecccccc-CCCcccccc
Q 037624 81 P-LSYLDLSFNDLSG-GIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g-~~p~~~~~~ 103 (408)
+ |+.|++.+|.|+- -+|+.++.+
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhh
Confidence 8 8888888887652 356655443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-09 Score=93.42 Aligned_cols=109 Identities=12% Similarity=0.053 Sum_probs=69.1
Q ss_pred ceeecccceeEEEEEEeCCCcEEEEEecccccCCCcc-----------------------hhhHHHHHHHHhc--ccCCc
Q 037624 177 KYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPA-----------------------STRSFQNEVDILY--PKYDI 231 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~--~~~n~ 231 (408)
...||+|+||.||+|+..+|+.||||.++........ ....+..|.+.+. .++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3679999999999999888999999999764211000 0112346777665 55554
Q ss_pred ceeeeEeEeeecCCccchhhhhhcccchhhhhh-h---------------------------------ccCccccccccC
Q 037624 232 ETLLSFMDFVCIKDACFWFMNTWRGEACSVFCT-M---------------------------------IMKPLSWIGLRE 277 (408)
Q Consensus 232 ~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~-l---------------------------------~~k~~~~~l~~~ 277 (408)
.....+ ... ..+++|||+ +++++... + +++|.|++++ +
T Consensus 82 ~~p~~~----~~~--~~~lVmE~~-~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPI----LLK--KNVLVMEFI-GDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEE----Eec--CCEEEEEEe-cCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C
Confidence 222211 111 135677776 44321110 0 2789999998 8
Q ss_pred CceEEeecccccccCC
Q 037624 278 LEAFVADFGMTMHLYC 293 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~ 293 (408)
++++|+|||+++.+..
T Consensus 154 ~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 GKPYIIDVSQAVELDH 169 (190)
T ss_pred CCEEEEEcccceecCC
Confidence 8999999999987653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.6e-09 Score=99.87 Aligned_cols=150 Identities=23% Similarity=0.303 Sum_probs=100.0
Q ss_pred hcccceeecccceeEEEEEEeCCC--cEEEEEecccccCCCcchhhHHHHHHHHhccc------CCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSS--KVIALKKLHHWENEEPASTRSFQNEVDILYPK------YDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g--~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~------~n~~~l~~~~~~~~~~ 244 (408)
.|...+.||+|+||.||.|..... ..+|+|......... ...+..|+.++... .+++.++.. ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~---G~~~ 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDH---GRST 92 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEe---ccCC
Confidence 788999999999999999997553 478888876432111 12567777777621 244444444 1134
Q ss_pred Cccchhhhhhcccchhhhhhh-----------------------------------ccCccccccccC-----CceEEee
Q 037624 245 DACFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLRE-----LEAFVAD 284 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~-----~~~ki~D 284 (408)
+...++||+..++ +|.+.. ++||.|..+... ..+.+.|
T Consensus 93 ~~~~~iVM~l~G~--sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 93 EDFNFIVMSLLGP--SLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred CceeEEEEeccCc--cHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 5566677666532 222211 278888877632 5689999
Q ss_pred ccccc--ccCCCCC--------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 285 FGMTM--HLYCDSS--------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 285 fGla~--~~~~~~~--------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
||+++ ....... ......||..| .+.|+||++-++.|+..|..|+.
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 99998 3221111 01235699999 78999999999999999999974
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.4e-09 Score=97.76 Aligned_cols=151 Identities=26% Similarity=0.381 Sum_probs=103.7
Q ss_pred cccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccC-CcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKY-DIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~-n~~~l~~~~~~~~~~~~~~~l 250 (408)
|.....||.|+||.||++... ..+|+|.+.............|.+|+.++. .|+ +++.+..+ .......++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~----~~~~~~~~~ 75 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDF----FQDEGSLYL 75 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEE----EecCCEEEE
Confidence 455678999999999999987 778999998654333235678999998875 444 45555554 233333456
Q ss_pred hhhhcccchhhhhhh------------------------------------ccCccccccccCC-ceEEeecccccccCC
Q 037624 251 MNTWRGEACSVFCTM------------------------------------IMKPLSWIGLREL-EAFVADFGMTMHLYC 293 (408)
Q Consensus 251 v~e~~~~~g~l~~~l------------------------------------~~k~~~~~l~~~~-~~ki~DfGla~~~~~ 293 (408)
+++++ .++++...+ ++||.|++++... .++++|||.++....
T Consensus 76 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 76 VMEYV-DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred EEecC-CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 66665 444444211 1677788888777 799999999986543
Q ss_pred CCC------eeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSS------NLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~------~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
... ......||..| ...|+||+|++++++++|+.|+..
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~ 213 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 321 12334455444 478999999999999999999653
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.9e-09 Score=92.06 Aligned_cols=145 Identities=9% Similarity=-0.000 Sum_probs=95.0
Q ss_pred cceeecccceeEEEEEEeCCCcEEEEEecccccCC-CcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhh
Q 037624 176 IKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENE-EPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
....|++|+||+||.+.- ++..++.+.+.....- .......|.+|+++|. .++++++++.+. ..+++
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------~~~lv 76 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------GRHLD 76 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc--------CEEEE
Confidence 457899999999997766 5667777777542210 0112335889999997 346677776641 12444
Q ss_pred hhhcccchhhhhhh--------------------------cc-CccccccccCCceEEeecccccccCCCCCe----e--
Q 037624 252 NTWRGEACSVFCTM--------------------------IM-KPLSWIGLRELEAFVADFGMTMHLYCDSSN----L-- 298 (408)
Q Consensus 252 ~e~~~~~g~l~~~l--------------------------~~-k~~~~~l~~~~~~ki~DfGla~~~~~~~~~----~-- 298 (408)
++|+ ++.+|.... ++ ||.||+++.++.++|+|||+|........- .
T Consensus 77 meyI-~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~r 155 (218)
T PRK12274 77 RSYL-AGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLARE 155 (218)
T ss_pred Eeee-cCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHH
Confidence 4554 333332211 26 689999999999999999999865433210 0
Q ss_pred -------eecccCCCC--------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 299 -------TLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 299 -------~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
.....++.| ...+.++-|.-++.++||+.+.-
T Consensus 156 Dl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 156 DLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 011244444 45688999999999999998853
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.3e-10 Score=105.14 Aligned_cols=90 Identities=36% Similarity=0.546 Sum_probs=74.6
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccc----------------------cccCcc-ccCCC
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLS----------------------GSIPSE-IGNLQ 57 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~----------------------g~iP~~-~~~l~ 57 (408)
+|..++.+++|+.|+|++|-+. .+|.+++.+..| .||||+|+|. |.+|++ +.++.
T Consensus 427 v~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 427 VPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred chHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 4566778888888888888887 788888888888 7888777664 134444 78899
Q ss_pred CCCEEEccCccccccCCCcccccc-cceeEeeccccc
Q 037624 58 ELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 58 ~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~ 93 (408)
+|.+|||.+|.+. .||+.++++. |++|.+++|+|.
T Consensus 506 nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9999999999999 8999999999 999999999998
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1e-09 Score=106.21 Aligned_cols=148 Identities=17% Similarity=0.263 Sum_probs=97.0
Q ss_pred ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhhc-----------------------------------cCccc
Q 037624 227 PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLS 271 (408)
Q Consensus 227 ~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~ 271 (408)
.|.|+.+++|. +..+...+.+.+|+ +.|+|.+.+. ++..|
T Consensus 5 ~h~n~~~f~g~----~~~~~~~~~i~~~c-~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 5 DHDNLNKFIGA----SVDGPEMIVIWEYC-SRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred chhhhhhheee----EecCCceEEEEeee-cCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 78899999999 88889999999999 9999988873 23344
Q ss_pred cccccCCceEEeecccccccCCC----CCee----------eecccCC-------CCcccchhhhhHHHHHHHhCCCCCc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCD----SSNL----------TLLAGTY-------GYEKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~----~~~~----------~~~~gt~-------~y~k~DVySfGvvl~Elltg~~p~~ 330 (408)
-+++..+.+|++|||+....... .... ....+.. +-.+.||||||++++|+++++.||+
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 45778899999999998876320 0000 0011110 1167999999999999999999997
Q ss_pred ccccccCCccccccchhhhccC---CCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLD---PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
........ ...+..+.+ +..++..... .+....+..++..||..+|++|
T Consensus 160 ~~~~~~~~-----~eii~~~~~~~~~~~rP~i~~~-~e~~~~l~~l~~~cw~e~P~~r 211 (484)
T KOG1023|consen 160 LRNLVEDP-----DEIILRVKKGGSNPFRPSIELL-NELPPELLLLVARCWEEIPEKR 211 (484)
T ss_pred cccccCCh-----HHHHHHHHhcCCCCcCcchhhh-hhcchHHHHHHHHhcccChhhC
Confidence 54322110 111111111 1122221111 1333468889999999999999
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.6e-10 Score=112.60 Aligned_cols=191 Identities=16% Similarity=0.248 Sum_probs=120.7
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHh---c-ccCCcceeeeEeEeeecCCccc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL---Y-PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l---~-~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++...+.+|++.|=.|.||+.++|. |+||++-+.. +....+.|.++++-+ . ++||..++... ...+...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~--p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQD--PTISLRPFKQRLEEIKFALMKAPNCLPFQKV----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccC--CCCCchHHHHHHHHHHHHhhcCCcccchHHH----HHhhHHH
Confidence 5666788999999999999998887 8899986532 233445554444322 2 88888877776 6667777
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC--C
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY--C 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~--~ 293 (408)
++|-+|. ..+|++.+. +|..|+++..=.-+.|+||.--|.-. .
T Consensus 97 ylvRqyv--khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 97 YLVRQYV--KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHHHHHH--hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 8888886 345666663 67777776655556677776544321 1
Q ss_pred CCC-eee----------------ecccCCCC-----------cccchhhhhHHHHHHHh-CCCCCcccccccCCcc--cc
Q 037624 294 DSS-NLT----------------LLAGTYGY-----------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS--SD 342 (408)
Q Consensus 294 ~~~-~~~----------------~~~gt~~y-----------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~--~~ 342 (408)
+.. ..+ ....+.+| .+.||||.|||+.||++ |++||........... ..
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 110 000 01111122 67899999999999998 7888876544333211 11
Q ss_pred ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+..+.++-|+.+ ..+++..++.||++|.+
T Consensus 255 ~e~~Le~Ied~~~---------------Rnlil~Mi~rdPs~RlS 284 (1431)
T KOG1240|consen 255 PEQLLEKIEDVSL---------------RNLILSMIQRDPSKRLS 284 (1431)
T ss_pred HHHHHHhCcCccH---------------HHHHHHHHccCchhccC
Confidence 2223444444433 35667788999999944
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.6e-09 Score=91.91 Aligned_cols=120 Identities=12% Similarity=0.063 Sum_probs=76.5
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCc-------------------chhhHHHHHHHHhc
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEP-------------------ASTRSFQNEVDILY 226 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~-------------------~~~~~~~~E~~~l~ 226 (408)
++...-..|...+.||+|+||.||+|..++|+.||||++........ .....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 34444344667789999999999999998899999998754221000 01123556776664
Q ss_pred --ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhh---------------------------ccCccccccccC
Q 037624 227 --PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM---------------------------IMKPLSWIGLRE 277 (408)
Q Consensus 227 --~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l---------------------------~~k~~~~~l~~~ 277 (408)
.+.++ .+...++ ....++++||+ +++++.... +++|.|++++++
T Consensus 89 ~l~~~~i-~v~~~~~-----~~~~~lv~e~~-~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 89 ALYEEGF-PVPKPID-----WNRHAVVMEYI-DGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred HHHHcCC-CCCceee-----cCCceEEEEEe-CCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCC
Confidence 33321 1222211 12335677777 555543322 278999999999
Q ss_pred CceEEeecccccccC
Q 037624 278 LEAFVADFGMTMHLY 292 (408)
Q Consensus 278 ~~~ki~DfGla~~~~ 292 (408)
++++|+|||++....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.8e-08 Score=91.73 Aligned_cols=189 Identities=15% Similarity=0.149 Sum_probs=99.0
Q ss_pred cccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhcccCC---------cceeeeEeEeeec
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILYPKYD---------IETLLSFMDFVCI 243 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n---------~~~l~~~~~~~~~ 243 (408)
+...+.||.|+++.||.++..+ |+.+|||.............+++.+|.-....-+. +.+++-.++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 4456889999999999999954 89999999876543334456677776644321000 1111111111111
Q ss_pred CC-----------ccc-----hhhhhhcccchhhhhhh----------------------------------------cc
Q 037624 244 KD-----------ACF-----WFMNTWRGEACSVFCTM----------------------------------------IM 267 (408)
Q Consensus 244 ~~-----------~~~-----~lv~e~~~~~g~l~~~l----------------------------------------~~ 267 (408)
.+ ..+ +++|.-+ .++|...+ ++
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~--~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA--QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE----SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred cCCCcceecCCCCccceeehhhhccchh--hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 10 000 1111110 11111110 27
Q ss_pred CccccccccCCceEEeecccccccCCCCCeeeecccCCCC--------------------cccchhhhhHHHHHHHhCCC
Q 037624 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY--------------------EKCDVYSFGVVALEILMGRQ 327 (408)
Q Consensus 268 k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y--------------------~k~DVySfGvvl~Elltg~~ 327 (408)
++.|++++++|.++++||+-........ .....+.+| .+.|.|++|+++|.|.+|+.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRY---RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEE---EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCcee---eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 8999999999999999998765432111 001111111 67899999999999999999
Q ss_pred CCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 328 PGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 328 p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
||+....... .+. ++-+-+ +-+..+..|+..-++.+|++|
T Consensus 249 Pf~~~~~~~~-----~~~---~f~~C~----------~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEAD-----PEW---DFSRCR----------DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGST-----SGG---GGTTSS-------------HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCcccc-----ccc---cchhcC----------CcCHHHHHHHHHHccCCcccC
Confidence 9985422111 000 111111 223445677778899999988
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.8e-09 Score=90.09 Aligned_cols=81 Identities=36% Similarity=0.453 Sum_probs=18.8
Q ss_pred CCccCCeEeccCCccccCCChhhc-ccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcc-cccc-cc
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSLG-RLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPL-GVLP-LS 83 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~~-~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~-~~~~-l~ 83 (408)
+..+++.|+|++|.++ .|. .++ .+.+| .||||+|.++ .++ .+..++.|+.|+|++|+++ .++..+ ..++ |+
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--
T ss_pred cccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCC
Confidence 3445566666666666 443 444 35566 6666666666 454 3555666666666666666 343333 2355 66
Q ss_pred eeEeeccccc
Q 037624 84 YLDLSFNDLS 93 (408)
Q Consensus 84 ~l~l~~n~l~ 93 (408)
.|++++|++.
T Consensus 92 ~L~L~~N~I~ 101 (175)
T PF14580_consen 92 ELYLSNNKIS 101 (175)
T ss_dssp EEE-TTS---
T ss_pred EEECcCCcCC
Confidence 6666666655
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.3e-09 Score=73.11 Aligned_cols=58 Identities=43% Similarity=0.609 Sum_probs=52.7
Q ss_pred ccc-EEEccccccccccC-ccccCCCCCCEEEccCccccccCCCcccccc-cceeEeecccc
Q 037624 34 TSC-TLTLSNNKLSGSIP-SEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDL 92 (408)
Q Consensus 34 ~~L-~L~ls~N~l~g~iP-~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l 92 (408)
++| +|+|++|+++ .+| ..|..+++|++|++++|.++...|..+..++ |++|++++|++
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 468 8999999999 666 5788999999999999999988888999999 99999999975
|
... |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.8e-09 Score=103.96 Aligned_cols=115 Identities=11% Similarity=0.109 Sum_probs=81.1
Q ss_pred HHhhcccceeecccceeEEEEEEeCCCcEEEEEe-cccccC----CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKK-LHHWEN----EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~-~~~~~~----~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
....|...+.||+|+||+||+|.+.+.. +++|+ +..... ......+.+.+|++++. +|++++....+ +
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~----~ 405 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIY----D 405 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEE----E
Confidence 3444566789999999999999986554 34443 221111 11122356889999886 67776665554 4
Q ss_pred cCCccchhhhhhcccchhhhhhh-------------------------ccCccccccccCCceEEeeccccccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM-------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l-------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
......++++||+ ++++|.+++ +++|.|+++ +++.++|+|||+++..
T Consensus 406 ~~~~~~~lv~E~~-~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 406 VDPEEKTIVMEYI-GGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EeCCCCEEEEEec-CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 4555678999999 888887755 178999999 6789999999999864
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.8e-10 Score=107.06 Aligned_cols=93 Identities=27% Similarity=0.198 Sum_probs=67.3
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
++.+|++|+.||||+|.+...-++++..+++| +|+||+|+++ .+|+ +|..|+.|++|+|++|+++-.--..|-.+.
T Consensus 288 ~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lss 366 (873)
T KOG4194|consen 288 WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSS 366 (873)
T ss_pred cccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhh
Confidence 46678888888999998887778888888888 8999988888 5544 666677777777777776644444555556
Q ss_pred cceeEeeccccccCCCc
Q 037624 82 LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~ 98 (408)
|+.|||++|.+++.+-+
T Consensus 367 L~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 367 LHKLDLRSNELSWCIED 383 (873)
T ss_pred hhhhcCcCCeEEEEEec
Confidence 66777777766655543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.6e-09 Score=106.91 Aligned_cols=202 Identities=17% Similarity=0.179 Sum_probs=111.8
Q ss_pred cceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhH----HHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 176 IKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRS----FQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~----~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..+++|.|++|.|+.... ...+..+.|..... .......+. +..|..+-. +|+|+...+.. ..+....
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~----~~~~~~~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDI----VQEIDGI 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHH----Hhhcccc
Confidence 457899999997777664 23444455543310 001111111 333333322 67775443333 2222222
Q ss_pred hhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
.-.|||+ +. +|+..+ ++|+.|.++..++.+||+|||.+.....+.
T Consensus 397 ~~~mE~~-~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 397 LQSMEYC-PY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hhhhhcc-cH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 2235555 44 444333 268888889999999999999997664332
Q ss_pred C----eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 296 S----NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 296 ~----~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
. .....+|+..| .-.||||-|||+..|++|+.|+......... . .. ....-.......
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~--~-~~--~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS--F-KT--NNYSDQRNIFEG 549 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc--h-hh--hccccccccccC
Confidence 2 23457788887 6789999999999999999997532211110 0 00 000000011111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCc--CCCc
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTP--MQKP 389 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~ 389 (408)
..............++-+-++.+|.+| |..+
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i 582 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQI 582 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHH
Confidence 112233334455667777899999999 4443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.7e-08 Score=86.95 Aligned_cols=106 Identities=12% Similarity=0.145 Sum_probs=74.6
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEecccccCCCc-----chhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEP-----ASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~-----~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
+.||+|++|.||+|.. +|..|++|+......... .....+.+|++++. .|++++....+ +......++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~----~~~~~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVY----FVDPENFII 76 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEE----EEeCCCCEE
Confidence 5699999999999998 667789998654221111 12245778888886 55665544444 444556778
Q ss_pred hhhhcccchhhhhhh-----------------------------ccCccccccccCCceEEeecccccc
Q 037624 251 MNTWRGEACSVFCTM-----------------------------IMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 251 v~e~~~~~g~l~~~l-----------------------------~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
++||+ +++++.+.+ +++|.|++++ ++.++|+|||.++.
T Consensus 77 v~e~~-~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYI-EGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEe-CCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 89998 777776443 1567888887 78899999999875
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.5e-09 Score=104.10 Aligned_cols=98 Identities=36% Similarity=0.545 Sum_probs=51.2
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhccc----------------------ccc-EEEccccccccccCccccCCCC
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRL----------------------TSC-TLTLSNNKLSGSIPSEIGNLQE 58 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l----------------------~~L-~L~ls~N~l~g~iP~~~~~l~~ 58 (408)
||..+++|..|+.|||+.|+++ .+|..++.| ..| .||.|.|.+. .+|+.++.+.+
T Consensus 113 ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~s 190 (722)
T KOG0532|consen 113 IPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTS 190 (722)
T ss_pred cchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHH
Confidence 5555566666666555555555 444444444 333 3444444444 44444444444
Q ss_pred CCEEEccCccccccCCCcccccccceeEeeccccccCCCcccccc
Q 037624 59 LSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 59 L~~l~l~~N~~~g~~p~~~~~~~l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
|+.|++..|++. .+|.++..++|..||+|.|+++ .+|-.|.++
T Consensus 191 lr~l~vrRn~l~-~lp~El~~LpLi~lDfScNkis-~iPv~fr~m 233 (722)
T KOG0532|consen 191 LRDLNVRRNHLE-DLPEELCSLPLIRLDFSCNKIS-YLPVDFRKM 233 (722)
T ss_pred HHHHHHhhhhhh-hCCHHHhCCceeeeecccCcee-ecchhhhhh
Confidence 444444444444 4455555555666666666665 555555554
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.9e-08 Score=103.12 Aligned_cols=143 Identities=19% Similarity=0.236 Sum_probs=92.4
Q ss_pred HhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCC----
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKD---- 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~---- 245 (408)
.++|+..+.|..|+||.||..+++. .+.+|+| +.+.. -..+- ++ .....+.++|- |...
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~--------lilRn--il-t~a~npfvvgD----c~tllk~~ 145 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN--------LILRN--IL-TFAGNPFVVGD----CATLLKNI 145 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccc--------hhhhc--cc-cccCCcceech----hhhhcccC
Confidence 3579999999999999999998864 5678884 43211 11111 12 11122222232 2211
Q ss_pred ----ccchhhhhhcccchhhhhhhccCccccccccCCceEEeecccccccCCCCC---------------eeeecccCCC
Q 037624 246 ----ACFWFMNTWRGEACSVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSS---------------NLTLLAGTYG 306 (408)
Q Consensus 246 ----~~~~lv~e~~~~~g~l~~~l~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~---------------~~~~~~gt~~ 306 (408)
...++..||....|-. +-..|+.|.++..-+++|+.|||+++..-.... ....++||+.
T Consensus 146 g~lPvdmvla~Eylh~ygiv--hrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPe 223 (1205)
T KOG0606|consen 146 GPLPVDMVLAVEYLHSYGIV--HRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPE 223 (1205)
T ss_pred CCCcchhhHHhHhhccCCee--cCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcc
Confidence 1113555666222221 225789999999999999999999975421100 0134689998
Q ss_pred C------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 307 Y------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 307 y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
| .-+|+|+.|+|++|.+-|+.||+.
T Consensus 224 yiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG 260 (1205)
T KOG0606|consen 224 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 260 (1205)
T ss_pred ccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence 8 679999999999999999999864
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.5e-08 Score=84.19 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=71.7
Q ss_pred eecccceeEEEEEEeCCCcEEEEEecccccCCC-----cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 179 CFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE-----PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~-----~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
.||+|+||.||+|.+ +|..|++|......... ......+.+|++++. ++.++.....+ +......+++
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~----~~~~~~~~lv 75 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVY----DVDPDNKTIV 75 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE----EEECCCCEEE
Confidence 389999999999996 56789999865322111 112356778988886 44443322222 2334456788
Q ss_pred hhhcccchhhhhhh--------------------------ccCccccccccCCceEEeeccccccc
Q 037624 252 NTWRGEACSVFCTM--------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 252 ~e~~~~~g~l~~~l--------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+||+ +++++...+ +++|.|++++ ++.+++.|||+++..
T Consensus 76 ~e~~-~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 76 MEYI-EGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEEE-CCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 8998 777766443 1577888887 889999999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.1e-08 Score=84.30 Aligned_cols=107 Identities=15% Similarity=0.110 Sum_probs=68.2
Q ss_pred ccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc-------ccCCcceeeeEeEeeecCC--
Q 037624 175 DIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY-------PKYDIETLLSFMDFVCIKD-- 245 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-------~~~n~~~l~~~~~~~~~~~-- 245 (408)
+....||+|+||.||+ .++....+||++.... ....+.+.+|++++. .|+|++++.++ +..+.
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~---~et~~g~ 76 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGT---VETDCGT 76 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEE---EEeCCCC
Confidence 4457899999999996 4333334799886532 223567899999986 24555555554 33332
Q ss_pred -ccchhhhhhcc-cchhhhhhhc-------------------------------cCcccccccc----CCceEEeecccc
Q 037624 246 -ACFWFMNTWRG-EACSVFCTMI-------------------------------MKPLSWIGLR----ELEAFVADFGMT 288 (408)
Q Consensus 246 -~~~~lv~e~~~-~~g~l~~~l~-------------------------------~k~~~~~l~~----~~~~ki~DfGla 288 (408)
..+.+++||.+ ..++|.+++. +||.|++++. +.+++|+||+-+
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 23447788842 4556644431 7889999873 348999995444
Q ss_pred c
Q 037624 289 M 289 (408)
Q Consensus 289 ~ 289 (408)
+
T Consensus 157 ~ 157 (210)
T PRK10345 157 S 157 (210)
T ss_pred c
Confidence 3
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-08 Score=86.30 Aligned_cols=87 Identities=37% Similarity=0.437 Sum_probs=42.6
Q ss_pred ccc-CCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcccc-CCCCCCEEEccCccccccC-CCccccc
Q 037624 5 EIG-SLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIG-NLQELSHLDSRHIFIKGTI-PYPLGVL 80 (408)
Q Consensus 5 ~~~-~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~-~l~~L~~l~l~~N~~~g~~-p~~~~~~ 80 (408)
.++ .+.+|+.||||+|.++ .++ .+..++.| +|+|++|+++ .++..+. .+++|+.|+|++|++...- -..+..+
T Consensus 36 ~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l 112 (175)
T PF14580_consen 36 NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSL 112 (175)
T ss_dssp S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-
T ss_pred chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcC
Confidence 455 5789999999999999 676 68889999 9999999999 7776564 6999999999999997421 1356678
Q ss_pred c-cceeEeecccccc
Q 037624 81 P-LSYLDLSFNDLSG 94 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g 94 (408)
+ |+.|++.+|+++.
T Consensus 113 ~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 113 PKLRVLSLEGNPVCE 127 (175)
T ss_dssp TT--EEE-TT-GGGG
T ss_pred CCcceeeccCCcccc
Confidence 8 9999999999873
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-07 Score=85.08 Aligned_cols=110 Identities=15% Similarity=0.023 Sum_probs=70.8
Q ss_pred hcccceeecccceeEEEEEE--eCCCcEEEEEecccccCCCc---------------------chhhHHHHHHHHhc--c
Q 037624 173 DFDIKYCFGTGGYGSVYIAQ--LTSSKVIALKKLHHWENEEP---------------------ASTRSFQNEVDILY--P 227 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~--~~~g~~vAvK~~~~~~~~~~---------------------~~~~~~~~E~~~l~--~ 227 (408)
.|...+.||+|+||.||+|. ..+|+.||||.+........ .....+.+|++.+. .
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999998 57899999999875321100 01123567888875 2
Q ss_pred c--CCcceeeeEeEeeecCCccchhhhhhcccchhhhhh----------------------------------hccCccc
Q 037624 228 K--YDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCT----------------------------------MIMKPLS 271 (408)
Q Consensus 228 ~--~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~----------------------------------l~~k~~~ 271 (408)
+ ...+.++.+ ...++++||+ ++.++... .+++|.|
T Consensus 109 ~~~i~~p~~~~~--------~~~~lV~E~~-~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW--------RRNVLVMEFI-GGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe--------cCceEEEEEe-cCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence 2 222222222 1235666766 44333211 1267888
Q ss_pred cccccCCceEEeecccccccC
Q 037624 272 WIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~ 292 (408)
++++ +++++|+|||.+....
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 8888 7899999999988654
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.8e-09 Score=104.78 Aligned_cols=84 Identities=40% Similarity=0.583 Sum_probs=51.7
Q ss_pred ccCCccCCeEeccCCccccCCChh-hcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSS-LGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~-~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
|-+..+|+.|+|++|+|. ++|++ +.++..| .|+||+|+|+ .+|..+.+|+.|++|....|++. .+| ++..++ |
T Consensus 379 l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL 454 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQL 454 (1081)
T ss_pred hccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcc
Confidence 345566666666666666 66654 4456666 6666666666 66666666666666666666665 455 555555 6
Q ss_pred ceeEeeccccc
Q 037624 83 SYLDLSFNDLS 93 (408)
Q Consensus 83 ~~l~l~~n~l~ 93 (408)
+.+|+|.|+|+
T Consensus 455 ~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 455 KVLDLSCNNLS 465 (1081)
T ss_pred eEEecccchhh
Confidence 66666666554
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-08 Score=98.50 Aligned_cols=91 Identities=35% Similarity=0.473 Sum_probs=85.3
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
++|.+|+.+.+|..||.|.|.+. ++|..++.+.+| .|++..|++. .+|.+++. -.|..||+|.|+++ .||..|..
T Consensus 157 ~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~iPv~fr~ 232 (722)
T KOG0532|consen 157 SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLPVDFRK 232 (722)
T ss_pred cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ecchhhhh
Confidence 47999999999999999999999 999999999999 9999999999 99999994 47999999999999 99999999
Q ss_pred cc-cceeEeeccccccC
Q 037624 80 LP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~ 95 (408)
|. |++|-|.+|.|..+
T Consensus 233 m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 233 MRHLQVLQLENNPLQSP 249 (722)
T ss_pred hhhheeeeeccCCCCCC
Confidence 99 99999999999954
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-08 Score=103.46 Aligned_cols=87 Identities=39% Similarity=0.568 Sum_probs=77.1
Q ss_pred CCCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccc-cCCCcc
Q 037624 1 TIPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG-TIPYPL 77 (408)
Q Consensus 1 ~ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g-~~p~~~ 77 (408)
++|++ +.++..|+.|+||+|.|+ .||..+.+|..| +|...+|++. .+| ++.+++.|+.+|||.|+++- .+|...
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC
Confidence 36665 789999999999999999 999999999999 9999999999 999 89999999999999999964 445544
Q ss_pred cccc-cceeEeeccc
Q 037624 78 GVLP-LSYLDLSFND 91 (408)
Q Consensus 78 ~~~~-l~~l~l~~n~ 91 (408)
.. + |++||+++|.
T Consensus 474 p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 474 PS-PNLKYLDLSGNT 487 (1081)
T ss_pred CC-cccceeeccCCc
Confidence 33 6 9999999997
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-07 Score=98.67 Aligned_cols=156 Identities=17% Similarity=0.211 Sum_probs=97.5
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCc-chhhHHHHHHHHhcccCCcceeeeEeEeeecC
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEP-ASTRSFQNEVDILYPKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~-~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~ 244 (408)
+.+...+.|.+.+.||+|+||+||+|...+|+.||+|.=+... ... -.-.+.+.-++ ..-.+.+.++... ..-
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~WEfYI~~q~~~RLk-~~~~~~~~~~~~a----~~~ 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PWEFYICLQVMERLK-PQMLPSIMHISSA----HVF 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC-ceeeeehHHHHHhhc-hhhhcchHHHHHH----Hcc
Confidence 3444556788889999999999999999889999999865421 110 00011111111 0011222222222 233
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccc-------cCCceEEee
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL-------RELEAFVAD 284 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~-------~~~~~ki~D 284 (408)
.+..+++.+|. +-|+|.+++. +||.|.+|. +....+|.|
T Consensus 766 ~~~S~lv~ey~-~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 766 QNASVLVSEYS-PYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred CCcceeeeecc-ccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 44556777777 7777766652 788888865 345789999
Q ss_pred cccccccC--CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCC
Q 037624 285 FGMTMHLY--CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 285 fGla~~~~--~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p 328 (408)
||.+-.+. ++.......++|-++ ...|-|.+.-+++-|+-|+.-
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99986543 233334455555544 678888888888888888753
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.6e-08 Score=101.48 Aligned_cols=83 Identities=30% Similarity=0.323 Sum_probs=51.9
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
+|+.|+|++|+|+ .+|.. .++| .|+|++|+|+ .+|.. +.+|+.|+|++|+|+ .+|..+..++ |+.|+++
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 3455555555555 34432 2345 5666666666 45543 235666777777776 6777777777 8888888
Q ss_pred ccccccCCCccccc
Q 037624 89 FNDLSGGIPKHLTT 102 (408)
Q Consensus 89 ~n~l~g~~p~~~~~ 102 (408)
+|+|+|.+|..+..
T Consensus 454 ~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 454 GNPLSERTLQALRE 467 (788)
T ss_pred CCCCCchHHHHHHH
Confidence 88888777766543
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=3e-07 Score=79.47 Aligned_cols=30 Identities=27% Similarity=0.273 Sum_probs=26.9
Q ss_pred ceeecccceeEEEEEEeCCCcEEEEEeccc
Q 037624 177 KYCFGTGGYGSVYIAQLTSSKVIALKKLHH 206 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~ 206 (408)
.+.||+|+||.||+|...+|+.||||++..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~ 31 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRT 31 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEec
Confidence 367999999999999998899999999865
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.2e-08 Score=95.39 Aligned_cols=90 Identities=28% Similarity=0.168 Sum_probs=71.5
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
|..|.++++|+|+.|+++..--.++.+|+.| .||||+|.+.-.-++++.-+++|.+||||+|+++..-|..+..+. |+
T Consensus 265 Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le 344 (873)
T KOG4194|consen 265 FYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLE 344 (873)
T ss_pred eeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhh
Confidence 4457788888888888885556677888888 888888888867777788888888888888888877777788888 88
Q ss_pred eeEeeccccccC
Q 037624 84 YLDLSFNDLSGG 95 (408)
Q Consensus 84 ~l~l~~n~l~g~ 95 (408)
.|+|+.|.++..
T Consensus 345 ~LnLs~Nsi~~l 356 (873)
T KOG4194|consen 345 ELNLSHNSIDHL 356 (873)
T ss_pred hhcccccchHHH
Confidence 888888887643
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.1e-07 Score=89.93 Aligned_cols=115 Identities=14% Similarity=0.096 Sum_probs=73.3
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCC---------------------------cc----hh------
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE---------------------------PA----ST------ 215 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~---------------------------~~----~~------ 215 (408)
.|+ .+.||+|++|.||+|++.+|+.||||+.+...... .. ..
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36799999999999999999999999986531000 00 00
Q ss_pred hHHHHHHHHhc------ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhh------------------------
Q 037624 216 RSFQNEVDILY------PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM------------------------ 265 (408)
Q Consensus 216 ~~~~~E~~~l~------~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l------------------------ 265 (408)
-+|.+|.+.+. ++.+.+.+-..+. ......+++|||+ +++++.+..
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~---~~~~~~vLvmE~i-~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYW---DRTSERVLTMEWI-DGIPLSDIAALDEAGLDRKALAENLARSFLNQV 273 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEeh---hhcCCceEEEEeE-CCcccccHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 02344444332 2223333333322 1123467888988 666554322
Q ss_pred --------ccCccccccccCCceEEeecccccccC
Q 037624 266 --------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 266 --------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+.+|.|+++++++++++.|||++..+.
T Consensus 274 ~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 274 LRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 167889999999999999999998775
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.3e-07 Score=60.46 Aligned_cols=35 Identities=49% Similarity=0.654 Sum_probs=19.2
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccc
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLS 46 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~ 46 (408)
+|++|+|++|+++ .+|+.+++|++| .|+|++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555666666665 555555555555 5555555555
|
... |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.1e-07 Score=94.98 Aligned_cols=82 Identities=32% Similarity=0.459 Sum_probs=42.8
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||..+. ++|+.|+|++|+|+ .+|..+. .+| +|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+..
T Consensus 193 LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~s- 262 (754)
T PRK15370 193 IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLPS- 262 (754)
T ss_pred CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHhC-
Confidence 454442 35666666666666 5665543 356 6666666666 5555433 24555555555554 44443321
Q ss_pred ccceeEeeccccc
Q 037624 81 PLSYLDLSFNDLS 93 (408)
Q Consensus 81 ~l~~l~l~~n~l~ 93 (408)
.|+.|++++|+++
T Consensus 263 ~L~~L~Ls~N~L~ 275 (754)
T PRK15370 263 ALQSLDLFHNKIS 275 (754)
T ss_pred CCCEEECcCCccC
Confidence 1455555555544
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.4e-07 Score=94.72 Aligned_cols=86 Identities=31% Similarity=0.513 Sum_probs=68.8
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||..+. ++|+.|+|++|+|+ .+|..+. .+| .|+|++|+++ .+|..+. ++|+.|+|++|+++ .+|..+..
T Consensus 214 LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~~- 283 (754)
T PRK15370 214 LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLPE- 283 (754)
T ss_pred CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccCC-
Confidence 566554 58999999999999 7887654 468 8999999998 8898775 58999999999998 67876541
Q ss_pred ccceeEeeccccccCCCc
Q 037624 81 PLSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 81 ~l~~l~l~~n~l~g~~p~ 98 (408)
.|+.|++++|+|++ +|.
T Consensus 284 sL~~L~Ls~N~Lt~-LP~ 300 (754)
T PRK15370 284 ELRYLSVYDNSIRT-LPA 300 (754)
T ss_pred CCcEEECCCCcccc-Ccc
Confidence 29999999999985 444
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.3e-07 Score=87.23 Aligned_cols=90 Identities=27% Similarity=0.209 Sum_probs=76.7
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
|..|++|+.|+||+|++++.-+.+|..+..+ .|.|..|++.-.--..|.+++.|.+|+|.+|+++-.-|.+|..+. |.
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~ 349 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLS 349 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceee
Confidence 6788999999999999998888889999999 899999998733233577899999999999999988899998888 99
Q ss_pred eeEeeccccccC
Q 037624 84 YLDLSFNDLSGG 95 (408)
Q Consensus 84 ~l~l~~n~l~g~ 95 (408)
.|+|-.|++...
T Consensus 350 ~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 350 TLNLLSNPFNCN 361 (498)
T ss_pred eeehccCcccCc
Confidence 999999987743
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.5e-08 Score=77.92 Aligned_cols=77 Identities=27% Similarity=0.371 Sum_probs=37.2
Q ss_pred eEeccCCccccCCChhhcccc---cc-EEEccccccccccCccccCC-CCCCEEEccCccccccCCCcccccc-cceeEe
Q 037624 14 SLYLSGNNLTGSIPSSLGRLT---SC-TLTLSNNKLSGSIPSEIGNL-QELSHLDSRHIFIKGTIPYPLGVLP-LSYLDL 87 (408)
Q Consensus 14 ~L~l~~N~l~g~~p~~~~~l~---~L-~L~ls~N~l~g~iP~~~~~l-~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l 87 (408)
.+|||++.|. .|++....+. .| ..+||+|.|. .+|..|... +.++.|+|++|.++ .+|.++..++ |+.||+
T Consensus 31 ~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 31 FLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 3455555444 4444433332 23 3455555555 455544432 34555555555555 4555555555 555555
Q ss_pred eccccc
Q 037624 88 SFNDLS 93 (408)
Q Consensus 88 ~~n~l~ 93 (408)
++|.+.
T Consensus 108 ~~N~l~ 113 (177)
T KOG4579|consen 108 RFNPLN 113 (177)
T ss_pred ccCccc
Confidence 555544
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.2e-07 Score=58.66 Aligned_cols=36 Identities=33% Similarity=0.520 Sum_probs=30.3
Q ss_pred ccc-EEEccccccccccCccccCCCCCCEEEccCcccc
Q 037624 34 TSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK 70 (408)
Q Consensus 34 ~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~ 70 (408)
++| +|+|++|+|+ .+|+.+++|++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 467 8999999999 88888999999999999999987
|
... |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.31 E-value=9.3e-07 Score=97.04 Aligned_cols=81 Identities=25% Similarity=0.292 Sum_probs=38.6
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeE
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~ 86 (408)
..+|+.|+|++|++. .+|..+..+++| .|+|++|+..+.+|. ++.+++|+.|+|++|.....+|..++.++ |+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 344555555555554 444444445555 455554433334442 44445555555554444444454444444 55555
Q ss_pred eeccc
Q 037624 87 LSFND 91 (408)
Q Consensus 87 l~~n~ 91 (408)
+++|.
T Consensus 688 L~~c~ 692 (1153)
T PLN03210 688 MSRCE 692 (1153)
T ss_pred CCCCC
Confidence 54443
|
syringae 6; Provisional |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-06 Score=90.83 Aligned_cols=44 Identities=36% Similarity=0.557 Sum_probs=28.1
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS 51 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~ 51 (408)
+||+.+. ++|+.|+|++|+|+ .+|. .+++| +|+|++|+|+ .+|.
T Consensus 215 sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~ 259 (788)
T PRK15387 215 TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV 259 (788)
T ss_pred cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccC
Confidence 3666664 36777777777777 5664 24566 6777777776 5554
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.2e-07 Score=92.25 Aligned_cols=118 Identities=15% Similarity=0.054 Sum_probs=74.6
Q ss_pred HhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCC--------------------------C-c----chhhH-
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENE--------------------------E-P----ASTRS- 217 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~--------------------------~-~----~~~~~- 217 (408)
-.+|+. +.||+|++|.||+|++++ |+.||||+.++.-.. + . ...+.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345766 789999999999999987 999999999753100 0 0 01112
Q ss_pred -----HHHHHHHhc------ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhh--h-------------------
Q 037624 218 -----FQNEVDILY------PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCT--M------------------- 265 (408)
Q Consensus 218 -----~~~E~~~l~------~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~--l------------------- 265 (408)
|.+|+.-+. .+.+.+.+-..+. .-....+++|||+ +++.+.+. +
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~---d~st~~VLvmE~i-~G~~l~d~~~l~~~g~d~~~la~~~v~~~~ 273 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYW---DYCSETVMVMERM-YGIPVSDVAALRAAGTDMKLLAERGVEVFF 273 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeec---ccCCCceEEEeee-cCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence 333333222 1222222223321 1133467899999 77766442 1
Q ss_pred -----------ccCccccccccCC----ceEEeecccccccCC
Q 037624 266 -----------IMKPLSWIGLREL----EAFVADFGMTMHLYC 293 (408)
Q Consensus 266 -----------~~k~~~~~l~~~~----~~ki~DfGla~~~~~ 293 (408)
+.+|-|++++.++ ++++.|||++..++.
T Consensus 274 ~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 274 TQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 1678899898877 999999999987653
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-06 Score=96.13 Aligned_cols=95 Identities=28% Similarity=0.264 Sum_probs=76.7
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|.++..+++|+.|+|++|...+.+| .++.+++| .|+|++|.....+|.+++++++|+.|++++|...+.+|..+ ++
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred cccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 56777889999999999876555888 58889999 89999987667899999999999999999977666888866 56
Q ss_pred c-cceeEeeccccccCCCc
Q 037624 81 P-LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~ 98 (408)
+ |+.|++++|......|.
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~ 722 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPD 722 (1153)
T ss_pred CCCCEEeCCCCCCcccccc
Confidence 6 88888888765555543
|
syringae 6; Provisional |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.8e-07 Score=83.40 Aligned_cols=83 Identities=25% Similarity=0.284 Sum_probs=64.8
Q ss_pred cCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
.....|+.||||+|.++ .|..+..-++.+ .|+||+|.+. .+- .+..|++|+.||||+|.++ .+-.+-..+. ++.
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 34567889999999998 888888888888 8999999988 554 3788889999999999887 5555545555 677
Q ss_pred eEeeccccc
Q 037624 85 LDLSFNDLS 93 (408)
Q Consensus 85 l~l~~n~l~ 93 (408)
|+|+.|.+.
T Consensus 357 L~La~N~iE 365 (490)
T KOG1259|consen 357 LKLAQNKIE 365 (490)
T ss_pred eehhhhhHh
Confidence 777777654
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.4e-07 Score=90.13 Aligned_cols=89 Identities=42% Similarity=0.568 Sum_probs=61.7
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccc-cc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLT-SC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~-~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+..++.++.|++.+|+++ .||.....+. +| .|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.++ |
T Consensus 112 ~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L 188 (394)
T COG4886 112 LLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNL 188 (394)
T ss_pred hhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhh
Confidence 344556777777777777 7776766664 77 6777777777 77666777777777777777777 6666555666 7
Q ss_pred ceeEeeccccccCCCc
Q 037624 83 SYLDLSFNDLSGGIPK 98 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~ 98 (408)
+.|++++|+++ .+|.
T Consensus 189 ~~L~ls~N~i~-~l~~ 203 (394)
T COG4886 189 NNLDLSGNKIS-DLPP 203 (394)
T ss_pred hheeccCCccc-cCch
Confidence 77777777776 3443
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.2e-07 Score=83.00 Aligned_cols=107 Identities=23% Similarity=0.265 Sum_probs=61.9
Q ss_pred cCcccccc--ccCCc--eEEeecccccccCCC-------C-------C--e-----eeecccC---CCCcccchhhhhHH
Q 037624 267 MKPLSWIG--LRELE--AFVADFGMTMHLYCD-------S-------S--N-----LTLLAGT---YGYEKCDVYSFGVV 318 (408)
Q Consensus 267 ~k~~~~~l--~~~~~--~ki~DfGla~~~~~~-------~-------~--~-----~~~~~gt---~~y~k~DVySfGvv 318 (408)
+|..|+++ ++|.. ..|+|||.+-.-... + . . .+.+.|. ..|.|+|.|+.|-+
T Consensus 367 lKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Gal 446 (598)
T KOG4158|consen 367 LKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGAL 446 (598)
T ss_pred ccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhh
Confidence 67777774 35543 468999987432110 0 0 0 0112222 24699999999999
Q ss_pred HHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 319 ALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 319 l~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
.||+++...||.......-.....+ +.-=|.+. ..+...+.++...-+++||.+|
T Consensus 447 aYEIfg~~NPFY~rGem~L~~r~Yq-----e~qLPalp-------~~vpp~~rqlV~~lL~r~pskR 501 (598)
T KOG4158|consen 447 AYEIFGRSNPFYKRGEMLLDTRTYQ-----ESQLPALP-------SRVPPVARQLVFDLLKRDPSKR 501 (598)
T ss_pred HHHHhccCCcccccchheechhhhh-----hhhCCCCc-------ccCChHHHHHHHHHhcCCcccc
Confidence 9999999999864221111001111 11112222 2233445577778899999999
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.7e-07 Score=88.30 Aligned_cols=90 Identities=27% Similarity=0.220 Sum_probs=49.7
Q ss_pred cccCCccCCeEeccCCcccc------CCChhhcccccc-EEEccccccccccCccccCCCC---CCEEEccCccccc---
Q 037624 5 EIGSLRNLVSLYLSGNNLTG------SIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQE---LSHLDSRHIFIKG--- 71 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g------~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~---L~~l~l~~N~~~g--- 71 (408)
.+...++|+.|++++|.+.+ .++..+..+++| .|+|++|.+++..+..+..+.. |+.|++++|++++
T Consensus 46 ~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~ 125 (319)
T cd00116 46 ALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL 125 (319)
T ss_pred HHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH
Confidence 34455556666666666552 233445555566 6666666666555555544444 6666666666652
Q ss_pred -cCCCccccc-c-cceeEeecccccc
Q 037624 72 -TIPYPLGVL-P-LSYLDLSFNDLSG 94 (408)
Q Consensus 72 -~~p~~~~~~-~-l~~l~l~~n~l~g 94 (408)
.+...+..+ + |+.|++++|.+++
T Consensus 126 ~~l~~~l~~~~~~L~~L~L~~n~l~~ 151 (319)
T cd00116 126 RLLAKGLKDLPPALEKLVLGRNRLEG 151 (319)
T ss_pred HHHHHHHHhCCCCceEEEcCCCcCCc
Confidence 222333444 4 6666666666664
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.4e-06 Score=69.56 Aligned_cols=104 Identities=15% Similarity=0.073 Sum_probs=75.3
Q ss_pred ceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--cc--CCcceeeeEeEeeecCCccchhhh
Q 037624 177 KYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PK--YDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~--~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+.++. ++ ..+++++.+ ....+..++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~----~~~~~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLAS----GESDGWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEE----cCCCCccEEEE
Confidence 4679999999999999855 6789999864221 356888888876 33 467777776 55556778888
Q ss_pred hhcccchhhhh-----hh------------------------ccCccccccccCCceEEeeccccccc
Q 037624 253 TWRGEACSVFC-----TM------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 253 e~~~~~g~l~~-----~l------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
||+ +++.+.. .. ++++.|+++++...+++.|||.++..
T Consensus 73 e~~-~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 73 EWI-EGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred Eec-CCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 887 5554421 00 15778888888889999999998753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.15 E-value=9.4e-08 Score=88.11 Aligned_cols=91 Identities=26% Similarity=0.236 Sum_probs=50.3
Q ss_pred cCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCccccCCCCCCEEEccC-ccccccCCCcccccc-cceeE
Q 037624 11 NLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRH-IFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~-N~~~g~~p~~~~~~~-l~~l~ 86 (408)
.-+.|+|..|+++ .||+ +|+.+.+| .||||+|+|+-.-|++|..+++|..|-+.+ |+|+-..-..|+.+. ++.|.
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4455666666666 4433 45556666 666666666655555666666655554444 666632223455555 66666
Q ss_pred eeccccccCCCccccc
Q 037624 87 LSFNDLSGGIPKHLTT 102 (408)
Q Consensus 87 l~~n~l~g~~p~~~~~ 102 (408)
+.-|.+.......+..
T Consensus 147 lNan~i~Cir~~al~d 162 (498)
T KOG4237|consen 147 LNANHINCIRQDALRD 162 (498)
T ss_pred cChhhhcchhHHHHHH
Confidence 6666655444444433
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.3e-07 Score=85.46 Aligned_cols=85 Identities=26% Similarity=0.322 Sum_probs=58.9
Q ss_pred cCCeEeccCCcccc----CCChhhccc-ccc-EEEccccccccc----cCccccCCCCCCEEEccCccccc----cCCCc
Q 037624 11 NLVSLYLSGNNLTG----SIPSSLGRL-TSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKG----TIPYP 76 (408)
Q Consensus 11 ~l~~L~l~~N~l~g----~~p~~~~~l-~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g----~~p~~ 76 (408)
+|+.|+|++|++++ .+...+..+ ++| .|+|++|.+++. ++..+..++.|+.|+|++|.+++ .++..
T Consensus 109 ~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 188 (319)
T cd00116 109 SLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEG 188 (319)
T ss_pred cccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHH
Confidence 38888888888873 334455666 778 788888888743 34445667788888888888874 24444
Q ss_pred ccccc-cceeEeeccccccC
Q 037624 77 LGVLP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 77 ~~~~~-l~~l~l~~n~l~g~ 95 (408)
+...+ |+.|++++|.+++.
T Consensus 189 l~~~~~L~~L~L~~n~i~~~ 208 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDE 208 (319)
T ss_pred HHhCCCCCEEeccCCccChH
Confidence 55556 88888888877643
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.4e-07 Score=74.54 Aligned_cols=90 Identities=26% Similarity=0.343 Sum_probs=76.5
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccc-cc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLT-SC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~-~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+.....|+..+||+|.|. .+|..|.... .+ +|||++|.++ .+|.++..++.|+.|+++.|.|. ..|.-+..+. +
T Consensus 49 l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l 125 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKL 125 (177)
T ss_pred HhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhH
Confidence 445667888999999999 8998887754 67 8999999999 99999999999999999999998 7788787788 8
Q ss_pred ceeEeeccccccCCCcc
Q 037624 83 SYLDLSFNDLSGGIPKH 99 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~ 99 (408)
..|+..+|... ++|..
T Consensus 126 ~~Lds~~na~~-eid~d 141 (177)
T KOG4579|consen 126 DMLDSPENARA-EIDVD 141 (177)
T ss_pred HHhcCCCCccc-cCcHH
Confidence 89998888766 55543
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.1e-06 Score=82.36 Aligned_cols=124 Identities=22% Similarity=0.247 Sum_probs=80.5
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++.|+++ ...+|.+|+. +||.|+....+...||.|||+......
T Consensus 330 ~lyI~Mn~c-~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~ 408 (516)
T KOG1033|consen 330 YLYIQMNLC-EKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDK 408 (516)
T ss_pred chhhhhhhh-hhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeeccc
Confidence 467788888 7888888873 344555555677899999999876654
Q ss_pred CC------CeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC
Q 037624 294 DS------SNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 294 ~~------~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
.. ...+...||..| .|+|+||+|+||+|+++ -..+++.. ..+.++-|..
T Consensus 409 ~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------------~t~~d~r~g~ 476 (516)
T KOG1033|consen 409 DETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------------ATLTDIRDGI 476 (516)
T ss_pred CCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH------------HhhhhhhcCC
Confidence 43 123567899999 89999999999999998 44444321 1233333444
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+++.. ..+.+. =..+..+-+.+.|.+|+.
T Consensus 477 ip~~~---~~d~p~-e~~ll~~lls~~p~~RP~ 505 (516)
T KOG1033|consen 477 IPPEF---LQDYPE-EYTLLQQLLSPSPEERPS 505 (516)
T ss_pred CChHH---hhcCcH-HHHHHHHhcCCCcccCch
Confidence 43211 111111 123445678999999973
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.3e-07 Score=81.03 Aligned_cols=61 Identities=25% Similarity=0.219 Sum_probs=35.4
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~ 69 (408)
+.-++.++.|+||+|.+. .+. ++..|++| .||||+|.++ .+-.+-..|-+..+|.|+.|.+
T Consensus 303 vKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 303 VKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKI 364 (490)
T ss_pred hhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhH
Confidence 334567777777777777 444 36667777 6777777776 4433333333444444444443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.2e-06 Score=85.21 Aligned_cols=88 Identities=42% Similarity=0.549 Sum_probs=70.6
Q ss_pred CCCccccCCc-cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccc
Q 037624 1 TIPLEIGSLR-NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~-~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+||+..+.+. +|+.|++++|++. .+|..+..++.| .|++++|+++ .+|...+.+++|+.|++++|+++ .+|..+.
T Consensus 130 ~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~ 206 (394)
T COG4886 130 DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIE 206 (394)
T ss_pred cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhh
Confidence 3677777774 8888888888888 787788888888 7888888888 88877778888888888888888 7777666
Q ss_pred ccc-cceeEeeccc
Q 037624 79 VLP-LSYLDLSFND 91 (408)
Q Consensus 79 ~~~-l~~l~l~~n~ 91 (408)
... |+.|.+++|.
T Consensus 207 ~~~~L~~l~~~~N~ 220 (394)
T COG4886 207 LLSALEELDLSNNS 220 (394)
T ss_pred hhhhhhhhhhcCCc
Confidence 666 8888888885
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=71.31 Aligned_cols=113 Identities=9% Similarity=-0.056 Sum_probs=72.9
Q ss_pred ceeec-ccceeEEEEEEeCCCcEEEEEecccccC----------CCcchhhHHHHHHHHhc--ccCCc--ceeeeEeEee
Q 037624 177 KYCFG-TGGYGSVYIAQLTSSKVIALKKLHHWEN----------EEPASTRSFQNEVDILY--PKYDI--ETLLSFMDFV 241 (408)
Q Consensus 177 ~~~iG-~G~~G~Vy~~~~~~g~~vAvK~~~~~~~----------~~~~~~~~~~~E~~~l~--~~~n~--~~l~~~~~~~ 241 (408)
...|| .||.|+||++... +..++||+...... .+......+.+|++++. +|.++ +..+++...-
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999985 66789998853210 01122345788988876 55553 5555542110
Q ss_pred ecCCccchhhhhhcccc-hhhhhhh----------------------------ccCccccccccCCceEEeeccccccc
Q 037624 242 CIKDACFWFMNTWRGEA-CSVFCTM----------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~-g~l~~~l----------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
.......++++|++ ++ .++.+.+ +++|.|++++.++.++|+|||.++..
T Consensus 115 ~~~~~~~~lV~e~l-~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 115 HGLFYRADILIERI-EGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred cCcceeeeEEEEec-CCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 00011124777877 54 4554432 17899999998889999999998764
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.1e-06 Score=85.79 Aligned_cols=154 Identities=19% Similarity=0.290 Sum_probs=105.8
Q ss_pred hcccceeecccceeEEEEEEeCC--CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS--SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~--g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.|...+.||+|+|+.|-...... ...+|+|.+.... ...........|..+-. +|.|.+.+++. ......
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~----~~~~~~ 95 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEP----SSSPRS 95 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCc----cCCCcc
Confidence 45555779999999998877633 3457777776432 11111222223444332 48888888777 666777
Q ss_pred chhhhhhcccchhhhhhh-c-----------------------------------cCccccccccCC-ceEEeecccccc
Q 037624 248 FWFMNTWRGEACSVFCTM-I-----------------------------------MKPLSWIGLREL-EAFVADFGMTMH 290 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l-~-----------------------------------~k~~~~~l~~~~-~~ki~DfGla~~ 290 (408)
.++..+|. .+++++... . ++|.|.+++..+ ..|++|||+|..
T Consensus 96 ~~~~~~~s-~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 96 YLLSLSYS-DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred cccccCcc-cccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 77777775 666665554 1 577777788777 999999999987
Q ss_pred cCC-CCCe--eeeccc-CCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 291 LYC-DSSN--LTLLAG-TYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 291 ~~~-~~~~--~~~~~g-t~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
+.. +... ....+| ++.| ...|+||.|+++.-+++|..|.+..
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 765 2222 244567 7777 5789999999999999999997643
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=1.2e-06 Score=86.80 Aligned_cols=83 Identities=35% Similarity=0.369 Sum_probs=56.2
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+.-++.|+.||||+|+++ ... .+-.|+.| +|||++|.|. .+|. ....|. |+.|+|++|-++.. -.+.++. |
T Consensus 183 Lqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL 256 (1096)
T KOG1859|consen 183 LQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSL 256 (1096)
T ss_pred HHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHHhhhhh
Confidence 344677888888888887 443 77778888 7888888888 7775 233344 77777777777522 2345666 7
Q ss_pred ceeEeecccccc
Q 037624 83 SYLDLSFNDLSG 94 (408)
Q Consensus 83 ~~l~l~~n~l~g 94 (408)
..||+++|-+++
T Consensus 257 ~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 257 YGLDLSYNLLSE 268 (1096)
T ss_pred hccchhHhhhhc
Confidence 777777776664
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.4e-06 Score=87.33 Aligned_cols=87 Identities=34% Similarity=0.440 Sum_probs=56.7
Q ss_pred ccCCeEeccCCc--cccCCChh-hcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 10 RNLVSLYLSGNN--LTGSIPSS-LGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 10 ~~l~~L~l~~N~--l~g~~p~~-~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
+.|++|-+..|. +. .++.. |..++.| .||||+|.=-+.+|.+|++|-+|++|+|++..++ .+|..++++. |.+
T Consensus 545 ~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 356677777775 33 45544 4446666 6777776544577777777777777777777776 6777777777 777
Q ss_pred eEeeccccccCCCc
Q 037624 85 LDLSFNDLSGGIPK 98 (408)
Q Consensus 85 l~l~~n~l~g~~p~ 98 (408)
||++.+.-...+|.
T Consensus 623 Lnl~~~~~l~~~~~ 636 (889)
T KOG4658|consen 623 LNLEVTGRLESIPG 636 (889)
T ss_pred eccccccccccccc
Confidence 77776654434433
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.70 E-value=1.7e-05 Score=77.66 Aligned_cols=87 Identities=30% Similarity=0.384 Sum_probs=64.5
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|..|+|.+|++. .+...+..+++| +|+||+|+++ .+. .+..++.|+.|++++|.++ .++ .+..+. |+
T Consensus 91 l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~-~i~-~l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKIT-KLE-GLSTLTLLKELNLSGNLIS-DIS-GLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchh-hcccchhhhhcchheeccccccc-ccc-chhhccchhhheeccCcch-hcc-CCccchhhh
Confidence 667788888888888888 566557778888 8888888888 444 3667777888888888886 333 345566 88
Q ss_pred eeEeeccccccCCC
Q 037624 84 YLDLSFNDLSGGIP 97 (408)
Q Consensus 84 ~l~l~~n~l~g~~p 97 (408)
.+++++|.++..-+
T Consensus 166 ~l~l~~n~i~~ie~ 179 (414)
T KOG0531|consen 166 LLDLSYNRIVDIEN 179 (414)
T ss_pred cccCCcchhhhhhh
Confidence 88888888775544
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.54 E-value=4.4e-05 Score=80.61 Aligned_cols=89 Identities=37% Similarity=0.389 Sum_probs=77.6
Q ss_pred CCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+|.+ |..++.|..||||+|.=-+.+|.+++.|-+| +|||++..++ .+|..+++|..|.+||+.++.....+|.-+..
T Consensus 562 is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~ 640 (889)
T KOG4658|consen 562 ISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLE 640 (889)
T ss_pred cCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhh
Confidence 3444 5669999999999987767999999999999 9999999999 99999999999999999999887777777777
Q ss_pred cc-cceeEeeccc
Q 037624 80 LP-LSYLDLSFND 91 (408)
Q Consensus 80 ~~-l~~l~l~~n~ 91 (408)
+. |++|.+-...
T Consensus 641 L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 641 LQSLRVLRLPRSA 653 (889)
T ss_pred cccccEEEeeccc
Confidence 88 9998887655
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=1.8e-05 Score=78.70 Aligned_cols=79 Identities=30% Similarity=0.434 Sum_probs=67.9
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc--cceeEe
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP--LSYLDL 87 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~--l~~l~l 87 (408)
.|.+.+.+.|.|. .+..++.-++.| .||||+|+|+ .+- .+..|+.|..|||++|.+. .+|. ++... |+.|++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~-l~~~gc~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQ-LSMVGCKLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccc-cchhhhhheeeee
Confidence 5777899999999 788889899999 9999999999 554 7889999999999999998 7776 34433 999999
Q ss_pred ecccccc
Q 037624 88 SFNDLSG 94 (408)
Q Consensus 88 ~~n~l~g 94 (408)
++|.++.
T Consensus 240 rnN~l~t 246 (1096)
T KOG1859|consen 240 RNNALTT 246 (1096)
T ss_pred cccHHHh
Confidence 9999873
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00019 Score=70.36 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=92.6
Q ss_pred cccceeecc--cceeEEEEEEe---CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 174 FDIKYCFGT--GGYGSVYIAQL---TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 174 f~~~~~iG~--G~~G~Vy~~~~---~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
|.....+|+ |.+|.||.+.. .++..+|+|+-+..... +.....=.+|+.... .|+|.++.... ....
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~-p~~~~~k~~~~~s~~~i~~~~~~v~~~~~----~e~~ 190 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSP-PLDSKRKLREFLSHHKIDSHENPVRDSPA----WEGS 190 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCC-ccccccccchhhcccccCccccccccCcc----cccC
Confidence 444577999 99999999987 45778999985432211 111122233443332 56666663333 5556
Q ss_pred ccchhhhhhcccchhhhhhhc--------------------------------------cCccccccccC-CceEEeecc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI--------------------------------------MKPLSWIGLRE-LEAFVADFG 286 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~-~~~ki~DfG 286 (408)
+..++.+|+++ .++..+.. +++.|+....+ ...+..|||
T Consensus 191 ~~lfiqtE~~~--~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 191 GILFIQTELCG--ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred Ccceeeecccc--chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 66666666652 33333331 45556666667 788999999
Q ss_pred cccccCCCCCeee-----ecccCCCC-----------cccchhhhhHHHHHHHhCCCCCc
Q 037624 287 MTMHLYCDSSNLT-----LLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 287 la~~~~~~~~~~~-----~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
+...+....-... ...|..-| .++|+||+|.|.+|..++-....
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccccc
Confidence 9887754431111 11333444 68999999999999999877643
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00054 Score=57.88 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=65.5
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCC-cceeeeEeEeeecCCccchhhhhh
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYD-IETLLSFMDFVCIKDACFWFMNTW 254 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n-~~~l~~~~~~~~~~~~~~~lv~e~ 254 (408)
+.++.|.++.||+++.. +..|++|....... ....+.+|++++. .+.+ .+.++.+ .. ...++++||
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~----~~--~~~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYF----DP--ETGVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEE----eC--CCCeEEEEe
Confidence 56899999999999985 66799998754221 1235677887775 2223 3444433 22 234678888
Q ss_pred cccchhhhh------------------------------hhccCccccccccCCceEEeecccccc
Q 037624 255 RGEACSVFC------------------------------TMIMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 255 ~~~~g~l~~------------------------------~l~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+ ++.++.. |-+.++.|++++ +..+++.|||.+..
T Consensus 73 i-~G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 73 I-EGSELLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c-CCCccccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 7 6655542 112566788887 66899999998764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.24 E-value=8.8e-05 Score=72.59 Aligned_cols=83 Identities=34% Similarity=0.336 Sum_probs=69.7
Q ss_pred CCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-ccee
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYL 85 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l 85 (408)
.+..+..++|+.|.+. .+-..++.+++| .|+|.+|++. .|...+..+++|++|+|++|.++...+ +..+. |+.|
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccc--hhhccchhhh
Confidence 4567788889999998 555568889999 9999999999 666658899999999999999984433 56777 9999
Q ss_pred Eeecccccc
Q 037624 86 DLSFNDLSG 94 (408)
Q Consensus 86 ~l~~n~l~g 94 (408)
++++|.++.
T Consensus 146 ~l~~N~i~~ 154 (414)
T KOG0531|consen 146 NLSGNLISD 154 (414)
T ss_pred eeccCcchh
Confidence 999999884
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00037 Score=59.20 Aligned_cols=79 Identities=29% Similarity=0.423 Sum_probs=40.3
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccC-CCCCCEEEccCccccccCC--Ccccccc-ccee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGN-LQELSHLDSRHIFIKGTIP--YPLGVLP-LSYL 85 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~-l~~L~~l~l~~N~~~g~~p--~~~~~~~-l~~l 85 (408)
+...+||++|.+. .++ .|..++.| +|.|++|+++ .|-+.++. +++|..|.|.+|++. .+- ..+..+| |++|
T Consensus 43 ~~d~iDLtdNdl~-~l~-~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~-~l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 43 QFDAIDLTDNDLR-KLD-NLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQ-ELGDLDPLASCPKLEYL 118 (233)
T ss_pred ccceecccccchh-hcc-cCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchh-hhhhcchhccCCcccee
Confidence 3445666666655 333 44455555 6666666666 44444443 455666666666654 111 1233444 5555
Q ss_pred Eeeccccc
Q 037624 86 DLSFNDLS 93 (408)
Q Consensus 86 ~l~~n~l~ 93 (408)
.+-+|+.+
T Consensus 119 tll~Npv~ 126 (233)
T KOG1644|consen 119 TLLGNPVE 126 (233)
T ss_pred eecCCchh
Confidence 55555544
|
|
| >PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00013 Score=38.88 Aligned_cols=21 Identities=71% Similarity=0.841 Sum_probs=13.3
Q ss_pred cCCeEeccCCccccCCChhhcc
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGR 32 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~ 32 (408)
+|++|||++|+|+ .||++|++
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT
T ss_pred CccEEECCCCcCE-eCChhhcC
Confidence 4666666666666 66666544
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A .... |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00013 Score=68.78 Aligned_cols=39 Identities=28% Similarity=0.141 Sum_probs=19.7
Q ss_pred CCCCCCEEEccCccccccCCCcccccc-cceeEeeccccc
Q 037624 55 NLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 55 ~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~ 93 (408)
.+|+|..|+|..|...+.-......+. |+.|||++|++-
T Consensus 220 ~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 220 TFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred hCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 345555666666542222222223334 667777777654
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00052 Score=60.62 Aligned_cols=82 Identities=26% Similarity=0.246 Sum_probs=53.6
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEcccc--ccccccCccccCCCCCCEEEccCccccccCCCccc---ccc-
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNN--KLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG---VLP- 81 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N--~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~---~~~- 81 (408)
+..|+.|.+.+-.++ ++- .+-.|++| .|.||.| ..++.++.-.-.+++|++|+||+|++. ++..+. .+.
T Consensus 42 ~~~le~ls~~n~glt-t~~-~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~--~lstl~pl~~l~n 117 (260)
T KOG2739|consen 42 FVELELLSVINVGLT-TLT-NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK--DLSTLRPLKELEN 117 (260)
T ss_pred ccchhhhhhhcccee-ecc-cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc--cccccchhhhhcc
Confidence 345666666666666 332 34466677 7888888 667777776677788888888888885 244333 344
Q ss_pred cceeEeecccccc
Q 037624 82 LSYLDLSFNDLSG 94 (408)
Q Consensus 82 l~~l~l~~n~l~g 94 (408)
|..|++.+|.-+.
T Consensus 118 L~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 118 LKSLDLFNCSVTN 130 (260)
T ss_pred hhhhhcccCCccc
Confidence 6677777766543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.00081 Score=70.12 Aligned_cols=159 Identities=18% Similarity=0.144 Sum_probs=87.1
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..++|...+-+-+|+++.+.-+.-. .|...+.|.............++...+-.++ -++..+-++...-- .......
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~-i~p~~P~v~~~~~s-~~~rsP~ 879 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNIL-ITPRSPAVVRSFPS-FPCRSPL 879 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcc-ccCCCCceecccCC-CCCCCCc
Confidence 3456666677888999988866532 2323344433221111111122222222222 22333333333110 1223445
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC-
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD- 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~- 294 (408)
.++++|. .++++...++ .++.+.+...+++.+++|||.......-
T Consensus 880 ~L~~~~~-~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 880 PLVGHYL-NGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred chhhHHh-ccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 6777777 5666666652 2334444557889999999844321100
Q ss_pred ---------C-----------------C----eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 ---------S-----------------S----NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ---------~-----------------~----~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. . ......||..| ..+|+|++|++++|.++|..||..
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 0 01235677777 679999999999999999999864
|
|
| >KOG0473 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=4.2e-05 Score=66.12 Aligned_cols=86 Identities=22% Similarity=0.241 Sum_probs=77.1
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+|......+.|||+.|++- .+-..++-++.| .||||.|++. -+|.+++++..+..+++..|+.+ ..|.+++..+ +
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCc
Confidence 4566778899999999998 788888889999 8999999998 89999999999999999999988 8899999999 9
Q ss_pred ceeEeeccccc
Q 037624 83 SYLDLSFNDLS 93 (408)
Q Consensus 83 ~~l~l~~n~l~ 93 (408)
+++++-.|.|.
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 99999988865
|
|
| >PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.00047 Score=36.68 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=9.8
Q ss_pred CCEEEccCccccccCCCccc
Q 037624 59 LSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 59 L~~l~l~~N~~~g~~p~~~~ 78 (408)
|++|||++|+|+ .+|..++
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 4554443
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A .... |
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0014 Score=55.84 Aligned_cols=83 Identities=29% Similarity=0.373 Sum_probs=61.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcc-cccc-EEEccccccc--cccCccccCCCCCCEEEccCccccccCCC---cc
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGR-LTSC-TLTLSNNKLS--GSIPSEIGNLQELSHLDSRHIFIKGTIPY---PL 77 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~-l~~L-~L~ls~N~l~--g~iP~~~~~l~~L~~l~l~~N~~~g~~p~---~~ 77 (408)
.|..++.|.+|.|++|+++ .|-+.+.. +++| .|.|++|++. |.+- -+..|++|++|-+-+|..+-.--- .+
T Consensus 59 ~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~-pLa~~p~L~~Ltll~Npv~~k~~YR~yvl 136 (233)
T KOG1644|consen 59 NLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDLD-PLASCPKLEYLTLLGNPVEHKKNYRLYVL 136 (233)
T ss_pred cCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhcc-hhccCCccceeeecCCchhcccCceeEEE
Confidence 3567889999999999999 66666655 6779 9999999997 3332 367899999999999998732111 24
Q ss_pred cccc-cceeEeec
Q 037624 78 GVLP-LSYLDLSF 89 (408)
Q Consensus 78 ~~~~-l~~l~l~~ 89 (408)
..+| |+.||++.
T Consensus 137 ~klp~l~~LDF~k 149 (233)
T KOG1644|consen 137 YKLPSLRTLDFQK 149 (233)
T ss_pred EecCcceEeehhh
Confidence 4556 77777554
|
|
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.00077 Score=59.56 Aligned_cols=65 Identities=26% Similarity=0.316 Sum_probs=53.3
Q ss_pred cccCCccCCeEeccCC--ccccCCChhhcccccc-EEEccccccccccCccc---cCCCCCCEEEccCccccc
Q 037624 5 EIGSLRNLVSLYLSGN--NLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEI---GNLQELSHLDSRHIFIKG 71 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N--~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~---~~l~~L~~l~l~~N~~~g 71 (408)
.+..|++|+.|.||.| +.++.++.-.-.+++| +|+||+|++. +++++ ..+.+|..||+.+|.-+.
T Consensus 60 ~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~--~lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 60 NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK--DLSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc--cccccchhhhhcchhhhhcccCCccc
Confidence 3557889999999999 7778888778888999 9999999987 24444 467788899999988764
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.00036 Score=62.71 Aligned_cols=85 Identities=32% Similarity=0.297 Sum_probs=55.0
Q ss_pred CccCCeEeccCCccc--cCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccC-CCcccccc-cc
Q 037624 9 LRNLVSLYLSGNNLT--GSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI-PYPLGVLP-LS 83 (408)
Q Consensus 9 l~~l~~L~l~~N~l~--g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~-p~~~~~~~-l~ 83 (408)
.+.++.|||.+|.++ ..|-.-+.+++.| +||||.|+++..|-..-..+.+|+.|-|.+..+...- -..+..+| ++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 456777888888887 2344445667777 7888888887433222134567777777777665433 23456677 88
Q ss_pred eeEeeccccc
Q 037624 84 YLDLSFNDLS 93 (408)
Q Consensus 84 ~l~l~~n~l~ 93 (408)
.|++|.|++.
T Consensus 150 elHmS~N~~r 159 (418)
T KOG2982|consen 150 ELHMSDNSLR 159 (418)
T ss_pred hhhhccchhh
Confidence 8888888543
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0006 Score=64.35 Aligned_cols=83 Identities=30% Similarity=0.395 Sum_probs=38.2
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEccccccccccC--ccccCCCCCCEEEccCcccccc-CCCc-----ccc
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIP--SEIGNLQELSHLDSRHIFIKGT-IPYP-----LGV 79 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP--~~~~~l~~L~~l~l~~N~~~g~-~p~~-----~~~ 79 (408)
+++|..|+|+.|..-+.--.+..-+..| .|||++|++- ..| ..++.++.|+.|+++.+.++.. +|+. ...
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~ 299 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHT 299 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcc
Confidence 3444445555443111222222334445 5566655554 344 3455555666666655555421 2222 233
Q ss_pred cc-cceeEeecccc
Q 037624 80 LP-LSYLDLSFNDL 92 (408)
Q Consensus 80 ~~-l~~l~l~~n~l 92 (408)
.+ |++|+++.|++
T Consensus 300 f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 300 FPKLEYLNISENNI 313 (505)
T ss_pred cccceeeecccCcc
Confidence 34 66666666655
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.011 Score=50.06 Aligned_cols=108 Identities=11% Similarity=0.099 Sum_probs=64.0
Q ss_pred eeecccceeEEEEEEeCCCcEEEEEe-cccccC----CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchh
Q 037624 178 YCFGTGGYGSVYIAQLTSSKVIALKK-LHHWEN----EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~g~~vAvK~-~~~~~~----~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
..+++|+=+.+|.+.+-+. .+.+|. +.+... ...-..+...+|+++++ +...++.-+-+ ..+.....+
T Consensus 2 ~~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~----dvD~~~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVY----DVDPDNGLI 76 (204)
T ss_pred chhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEE----EEcCCCCEE
Confidence 3578999999999987443 344443 222111 11122345678999987 22222222222 345556678
Q ss_pred hhhhcccchhhhhhhc--------------------------cCccccccccCCceEEeecccccccC
Q 037624 251 MNTWRGEACSVFCTMI--------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~--------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+|||. ++-.+.+.+. +.+.|+++.. ..+.+.||||+..-.
T Consensus 77 ~me~I-~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~-~~i~~IDfGLg~~s~ 142 (204)
T COG3642 77 VMEYI-EGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSG-GRIYFIDFGLGEFSD 142 (204)
T ss_pred EEEEe-CChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEEEeC-CcEEEEECCcccccc
Confidence 88888 7666665552 4455655543 349999999998643
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.019 Score=48.28 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=61.6
Q ss_pred ceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 177 KYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.+.||+|.+|.||.|.+.++ .+|+|.=... ..+..+..|++++. .-.--+.++.| +...+.||
T Consensus 27 ~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~d-----s~r~~l~kEakiLeil~g~~~~p~vy~y--------g~~~i~me 92 (201)
T COG2112 27 EKELAKGTTSVVYLGEWRGG-EVALKVRRRD-----SPRRNLEKEAKILEILAGEGVTPEVYFY--------GEDFIRME 92 (201)
T ss_pred hhhhhcccccEEEEeeccCc-eEEEEEecCC-----cchhhHHHHHHHHHHhhhcCCCceEEEe--------chhhhhhh
Confidence 46799999999999999654 7888875432 24678999999884 11222344444 22234478
Q ss_pred hcccchhhhhhhc---------------------------cCccccccccCCceEEeeccccccc
Q 037624 254 WRGEACSVFCTMI---------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
|. .+-.|...-. ..|-...+..+..+.|.||--|+..
T Consensus 93 ~i-~G~~L~~~~~~~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 93 YI-DGRPLGKLEIGGDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hh-cCcchhhhhhcccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 87 5544443321 1111122345668999999877743
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0092 Score=59.40 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=29.4
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEeccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHH 206 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~ 206 (408)
-..|+. +.|+.++-|.||+|++++|+.||||+.+.
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrP 159 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRP 159 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCC
Confidence 344543 67999999999999999999999998764
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.007 Score=57.99 Aligned_cols=81 Identities=25% Similarity=0.393 Sum_probs=53.8
Q ss_pred CCccCCeEeccCCccccCCChhhcccccc-EEEccc-cccccccCccccCCCCCCEEEccCc-cccccCCCcccccccce
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSN-NKLSGSIPSEIGNLQELSHLDSRHI-FIKGTIPYPLGVLPLSY 84 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~-N~l~g~iP~~~~~l~~L~~l~l~~N-~~~g~~p~~~~~~~l~~ 84 (408)
.+.+++.|++++|.|+ .+|. -..+| .|++++ ++++ .+|..+. ++|+.|++++| .+. .+|.. |+.
T Consensus 50 ~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLt-sLP~~LP--~nLe~L~Ls~Cs~L~-sLP~s-----Le~ 116 (426)
T PRK15386 50 EARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLT-TLPGSIP--EGLEKLTVCHCPEIS-GLPES-----VRS 116 (426)
T ss_pred HhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcc-cCCchhh--hhhhheEccCccccc-ccccc-----cce
Confidence 4678999999999998 7882 23357 899987 5665 7887653 58999999988 443 56654 444
Q ss_pred eEeecccc--ccCCCcccc
Q 037624 85 LDLSFNDL--SGGIPKHLT 101 (408)
Q Consensus 85 l~l~~n~l--~g~~p~~~~ 101 (408)
|+++.|.+ -+.+|..+.
T Consensus 117 L~L~~n~~~~L~~LPssLk 135 (426)
T PRK15386 117 LEIKGSATDSIKNVPNGLT 135 (426)
T ss_pred EEeCCCCCcccccCcchHh
Confidence 44554432 234555443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.005 Score=60.57 Aligned_cols=155 Identities=18% Similarity=0.127 Sum_probs=93.5
Q ss_pred HHHHhhcccceeecccceeEEEEEEeC--CCcEEEEEecccccCCCcc---hhhHHHHHHHHhcccCCcceeeeEeEeee
Q 037624 168 IEATEDFDIKYCFGTGGYGSVYIAQLT--SSKVIALKKLHHWENEEPA---STRSFQNEVDILYPKYDIETLLSFMDFVC 242 (408)
Q Consensus 168 ~~at~~f~~~~~iG~G~~G~Vy~~~~~--~g~~vAvK~~~~~~~~~~~---~~~~~~~E~~~l~~~~n~~~l~~~~~~~~ 242 (408)
..-+.+|.....||.|.|+.|++...+ ++..+++|.+......... ...+...|+.+. .|.+++....- +
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~-~~~~~~g~~~~----W 335 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG-SHLPSVGKNSS----W 335 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh-cccccCCCCCC----c
Confidence 344568899999999999999998763 5778999998754322211 122233344443 56665554333 3
Q ss_pred cCCccchhhhhhcccchhhhhhh---------------------------------ccCccccccccC-CceEEeecccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRE-LEAFVADFGMT 288 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~-~~~ki~DfGla 288 (408)
......++-.||+ ++++..... ++++.|+.+..+ +.-+++|||.+
T Consensus 336 ~~~r~~~ip~e~~-~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 336 SQLRQGYIPLEFC-EGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccccccCchhhh-cCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccc
Confidence 4444445666666 554443222 156667766654 88899999998
Q ss_pred cccCCCCCeeeecccCC--------CC---cccchhhhhHHHHHHHhCCCC
Q 037624 289 MHLYCDSSNLTLLAGTY--------GY---EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~--------~y---~k~DVySfGvvl~Elltg~~p 328 (408)
..+...........+-. .| .+.|+||||.-+.|.+++..-
T Consensus 415 t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 415 TRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred cccceecccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 64321111100000000 11 799999999999999998753
|
|
| >PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.0036 Score=30.89 Aligned_cols=17 Identities=59% Similarity=0.733 Sum_probs=8.9
Q ss_pred ccCCeEeccCCccccCCC
Q 037624 10 RNLVSLYLSGNNLTGSIP 27 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p 27 (408)
++|+.|+|++|+|+ .+|
T Consensus 1 ~~L~~L~l~~n~L~-~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLT-SLP 17 (17)
T ss_dssp TT-SEEEETSS--S-SE-
T ss_pred CccCEEECCCCCCC-CCc
Confidence 46777777777776 554
|
... |
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.013 Score=56.10 Aligned_cols=48 Identities=25% Similarity=0.460 Sum_probs=31.3
Q ss_pred cCCeEeccC-CccccCCChhhcccccc-EEEcccc-ccccccCccccCCCCCCEEEccCcc
Q 037624 11 NLVSLYLSG-NNLTGSIPSSLGRLTSC-TLTLSNN-KLSGSIPSEIGNLQELSHLDSRHIF 68 (408)
Q Consensus 11 ~l~~L~l~~-N~l~g~~p~~~~~l~~L-~L~ls~N-~l~g~iP~~~~~l~~L~~l~l~~N~ 68 (408)
+|+.|++++ ++++ .+|..+ ..+| .|++++| ++. .+|.. |+.|+++.|.
T Consensus 73 sLtsL~Lsnc~nLt-sLP~~L--P~nLe~L~Ls~Cs~L~-sLP~s------Le~L~L~~n~ 123 (426)
T PRK15386 73 ELTEITIENCNNLT-TLPGSI--PEGLEKLTVCHCPEIS-GLPES------VRSLEIKGSA 123 (426)
T ss_pred CCcEEEccCCCCcc-cCCchh--hhhhhheEccCccccc-ccccc------cceEEeCCCC
Confidence 688888887 5665 677655 2467 7888887 554 66654 4455555544
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.016 Score=58.14 Aligned_cols=129 Identities=9% Similarity=0.061 Sum_probs=73.3
Q ss_pred eCCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhhc------
Q 037624 193 LTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI------ 266 (408)
Q Consensus 193 ~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~------ 266 (408)
..++.+|.|...+..........++-..-++++ |||++...+.. ...++..|+|+|-+.+-+.....+.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-RHP~Il~yL~t----~e~~~~~ylvTErV~Pl~~~lk~l~~~~v~~ 108 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-RHPNILSYLDT----TEEEGTLYLVTERVRPLETVLKELGKEEVCL 108 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhc-cCchhhhhhhh----hcccCceEEEeeccccHHHHHHHhHHHHHHH
Confidence 356888888888753321111223333344455 99998888877 6667778888876643332222110
Q ss_pred ----------------------cCccccccccCCceEEeecccccccCCCCC--eeeecccCCCC----c----ccchhh
Q 037624 267 ----------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS--NLTLLAGTYGY----E----KCDVYS 314 (408)
Q Consensus 267 ----------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~--~~~~~~gt~~y----~----k~DVyS 314 (408)
+....+.+.+.|+-||++|-++........ .......+..- . ..|.|-
T Consensus 109 Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~D~~~ 188 (690)
T KOG1243|consen 109 GLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSIDSWG 188 (690)
T ss_pred HHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccchhhhh
Confidence 111223456889999999987754322111 00000000000 1 349999
Q ss_pred hhHHHHHHHhCC
Q 037624 315 FGVVALEILMGR 326 (408)
Q Consensus 315 fGvvl~Elltg~ 326 (408)
||++++|++.|.
T Consensus 189 Lg~li~el~ng~ 200 (690)
T KOG1243|consen 189 LGCLIEELFNGS 200 (690)
T ss_pred HHHHHHHHhCcc
Confidence 999999999993
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 408 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-08 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-08 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-06 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 2e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 4e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 5e-06 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-06 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 6e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 6e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 7e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 7e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 7e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 8e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 8e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 8e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 8e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 9e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-06 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 9e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 1e-05 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-05 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-05 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-05 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-05 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 6e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-31
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP + ++ LV+L S N L+G++P S+ L + +T N++SG+IP G+ +L
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 60 S-HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
+ + G IP L L+++DLS N L G I L+
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFG-----SDKNTQKIHLAK 230
Query: 119 NAF 121
N+
Sbjct: 231 NSL 233
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 1 TIPLEIGSLRNLV-SLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
IP GS L S+ +S N LTG IP + L + LS N L G G+ +
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
+ + + +G+ L+ LDL N + G +P+ LT ++ L S+ +S
Sbjct: 224 QKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLT-----QLKFLHSLNVSF 277
Query: 119 NAF 121
N
Sbjct: 278 NNL 280
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 5e-30
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP I L L LY++ N++G+IP L ++ + TL S N LSG++P I +L L
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 60 SHLDSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSGGIPKHL 100
+ I G IP G + + +S N L+G IP
Sbjct: 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 4e-28
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 1 TIPLEIGSLRNLVSLYLSG-NNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQE 58
IP + +L L LY+ G NNL G IP ++ +LT L +++ +SG+IP + ++
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
L LD + + GT+P + LP L + N +SG IP
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 169
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-25
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP +L NL + LS N L G G + + L+ N L+ + +G + L
Sbjct: 189 KIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNL 246
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPK 98
+ LD R+ I GT+P L L L L++SFN+L G IP+
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 1e-23
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGS--IPSSLGRLTS-CTLTLSN-NKLSGSIPSEIGNLQ 57
+ + +L LSG NL IPSSL L L + N L G IP I L
Sbjct: 42 LCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLT 101
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
+L +L H + G IP L + L LD S+N LSG +P ++ + L+ I
Sbjct: 102 QLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS-----SLPNLVGITF 156
Query: 117 SINAF 121
N
Sbjct: 157 DGNRI 161
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 1e-14
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+ ++G +NL L L N + G++P L +L L +S N L G IP GNLQ
Sbjct: 236 DLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRF 293
Query: 60 SHLD 63
Sbjct: 294 DVSA 297
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 8e-07
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIP 50
T+P + L+ L SL +S NNL G IP G L +NNK P
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP 308
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 6e-06
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 37 TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGT--IPYPLGVLP-LSYLDLS-FNDL 92
T N G + +++LD + + IP L LP L++L + N+L
Sbjct: 30 TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNL 89
Query: 93 SGGIPKHLTTKLRRKVTRLISIVLSINAF 121
G IP + K+T+L + ++
Sbjct: 90 VGPIPPAIA-----KLTQLHYLYITHTNV 113
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-26
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP E+ ++ L +L L N+LTG IPS L T+ ++LSNN+L+G IP IG L+ L
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
+ L + G IP LG L +LDL+ N +G IP +
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCT-LTLSNNKLSGSIPSEIGNL-Q 57
+P GS L SL LS NN +G +P +L ++ L LS N+ SG +P + NL
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLP---LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
L LD G I L P L L L N +G IP L+ + L+S+
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS-----NCSELVSL 423
Query: 115 VLSINAF 121
LS N
Sbjct: 424 HLSFNYL 430
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 3e-25
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP + + LVSL+LS N L+G+IPSSLG L+ L L N L G IP E+ ++ L
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L + G IP L L+++ LS N L+G IPK + ++ L + LS
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI-----GRLENLAILKLSN 523
Query: 119 NAF 121
N+F
Sbjct: 524 NSF 526
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 4e-25
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
++ L ++ G + S L +S N LSG IP EIG++ L
Sbjct: 599 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 658
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT 101
L+ H I G+IP +G L L+ LDLS N L G IP+ ++
Sbjct: 659 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 4e-24
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSH 61
+++ NL L +S NN + IP LG ++ L +S NKLSG I EL
Sbjct: 193 DVDVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 251
Query: 62 LDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
L+ G IP L L YL L+ N +G IP L+ L + LS N
Sbjct: 252 LNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGAC----DTLTGLDLSGNH 305
Query: 121 F 121
F
Sbjct: 306 F 306
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-23
Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 29/145 (20%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP IG L NL L LS N+ +G+IP+ LG S L L+ N +G+IP+ +
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
Query: 60 ----------------------SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGI 96
H + +G L L + +++ G
Sbjct: 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 624
Query: 97 PKHLTTKLRRKVTRLISIVLSINAF 121
++ + +S N
Sbjct: 625 SPTF-----DNNGSMMFLDMSYNML 644
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 9e-23
Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
IP +G L L +SGN L+G ++ T L +S+N+ G IP L+ L
Sbjct: 215 GIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSL 271
Query: 60 SHLDSRHIFIKGTIPYPL-GVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
+L G IP L G L+ LDLS N G +P + L S+ LS
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF-----GSCSLLESLALS 326
Query: 118 INAF 121
N F
Sbjct: 327 SNNF 330
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 1e-22
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPS--EIGNLQ 57
+ + SL L SL+LS +++ GS+ S +L LS N LSG + + +G+
Sbjct: 68 AVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCS 126
Query: 58 ELSHLDSRHIFIKGTIPYPLGV-LP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
L L+ + G+ L L LDLS N +SG L L +
Sbjct: 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWV--LSDGCGELKHLA 184
Query: 116 LSINAF 121
+S N
Sbjct: 185 ISGNKI 190
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 3e-21
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 1 TIPLEIG-SLRNLVSLYLSGNNLTGSIPSSLGRLTSCT----LTLSNNKLSGSIPSEIGN 55
+ G L +L L LS N+++G+ C L +S NK+SG + +
Sbjct: 141 PGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSR 198
Query: 56 LQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
L LD IP+ LG L +LD+S N LSG + + T L +
Sbjct: 199 CVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI-----STCTELKLL 252
Query: 115 VLSINAF 121
+S N F
Sbjct: 253 NISSNQF 259
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 2e-20
Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
IP EIGS+ L L L N+++GSIP +G L L LS+NKL G IP + L
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM-- 705
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIP 97
L+ +DLS N+LSG IP
Sbjct: 706 ---------------------LTEIDLSNNNLSGPIP 721
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 2e-18
Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 29/145 (20%)
Query: 1 TIPLEIGSLRNLVSLYLSGN--------------------NLTGSIPSSLGRLTS---CT 37
IP E+G R+L+ L L+ N + G + C
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588
Query: 38 LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGI 96
+ + G ++ L + + G + +LD+S+N LSG I
Sbjct: 589 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648
Query: 97 PKHLTTKLRRKVTRLISIVLSINAF 121
PK + + L + L N
Sbjct: 649 PKEIG-----SMPYLFILNLGHNDI 668
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 6e-16
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 8 SLRNLVSLYLSGNNLT---GSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLD 63
+ S+ LS L ++ SSL LT L LSN+ ++GS+ L+ LD
Sbjct: 48 RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLD 106
Query: 64 SRHIFIKGTIPYP--LGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
+ G + LG L +L++S N L KL L + LS N+
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKL----NSLEVLDLSANS 162
Query: 121 F 121
Sbjct: 163 I 163
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 6e-13
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPS 51
+IP E+G LR L L LS N L G IP ++ LT + LSNN LSG IP
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 1e-18
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
S L L LS + + L+ TL L+ N + L L
Sbjct: 44 GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L + + +P+G L L L+++ N + + L T L + LS N
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL----TNLEHLDLSSN 159
Query: 120 AFLTFLILGILFFLR 134
+ + L L
Sbjct: 160 -KIQSIYCTDLRVLH 173
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 6e-17
Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSI-PSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
L +L L ++GN+ + P L + L LS +L P+ +L L
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP---KHLTTKLR 105
L+ H +P L L LD S N + +H + L
Sbjct: 497 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 546
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 27/138 (19%), Positives = 40/138 (28%), Gaps = 10/138 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS-LGRLTSCT-LTLSNNKLSGSIPSEIGNLQE 58
T+ L L L +NL S L + L +S+ + L
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 59 LSHLDSRHIFIKGTI-PYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
L L + P L L++LDLS L P ++ L + +
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF-----NSLSSLQVLNM 501
Query: 117 SINAFLTFLILGILFFLR 134
S N L L
Sbjct: 502 SHN-NFFSLDTFPYKCLN 518
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 6e-15
Identities = 33/137 (24%), Positives = 48/137 (35%), Gaps = 14/137 (10%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKL-SGSIPSEIGNLQEL 59
L +L L NL +G L + L +++N + S +P NL L
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL 151
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-----LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
HLD I+ L VL LDLS N ++ P K RL +
Sbjct: 152 EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF------KEIRLHKL 205
Query: 115 VLSINAFLTFLILGILF 131
L N F + ++
Sbjct: 206 TLRNN-FDSLNVMKTCI 221
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 1e-14
Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 10/136 (7%)
Query: 2 IPLEI-GSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQE 58
+ SLRNL+ L +S + + L+S L ++ N + +I L+
Sbjct: 412 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L+ LD ++ P L L L++S N+ L + S
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL-----NSLQVLDYS 526
Query: 118 INAFLTFLILGILFFL 133
+N + L
Sbjct: 527 LNH-IMTSKKQELQHF 541
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 4/108 (3%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQEL 59
+L L LS N + + S+ L L ++ L + +L+ L
Sbjct: 365 CSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR 106
+LD H + L L L ++ N + T+LR
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLT--GSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQ 57
L +L L LS N L+ G S TS L LS N + + S L+
Sbjct: 338 GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLE 396
Query: 58 ELSHLDSRHIFIKGTIPY-PLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
+L HLD +H +K + L L YLD+S ++ L +
Sbjct: 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN-----GLSSLEVLK 451
Query: 116 LSINAFLTFLILGIL 130
++ N+F + I
Sbjct: 452 MAGNSFQENFLPDIF 466
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 5e-11
Identities = 28/139 (20%), Positives = 40/139 (28%), Gaps = 30/139 (21%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-----CTLTLSNNKLSGSIPSEIGNL 56
+P +L NL L LS N + + L L +L LS N ++ P +
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 200
Query: 57 QELSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR-KVTRLISIV 115
+ L L L N S + K L +V RL+
Sbjct: 201 R------------------------LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGE 236
Query: 116 LSINAFLTFLILGILFFLR 134
L L L
Sbjct: 237 FRNEGNLEKFDKSALEGLC 255
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 23/97 (23%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
P SL +L L +S NN L S L S N + S E+ +
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS- 544
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIP 97
L++L+L+ ND +
Sbjct: 545 ---------------------LAFLNLTQNDFACTCE 560
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 26/123 (21%), Positives = 38/123 (30%), Gaps = 9/123 (7%)
Query: 13 VSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGT 72
++ N IP +L T L LS N L + EL LD I+
Sbjct: 10 ITYQCMELNFY-KIPDNLPFSTK-NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI 67
Query: 73 IPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFLILGILF 131
L LS L L+ N + ++ L +V L L +
Sbjct: 68 EDGAYQSLSHLSTLILTGNPIQSLALGAF-----SGLSSLQKLVAVET-NLASLENFPIG 121
Query: 132 FLR 134
L+
Sbjct: 122 HLK 124
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 6e-10
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS--CTLTLSNNKLSGSIPSE--IGNLQ 57
L +L L S N++ S L S L L+ N + + + + ++
Sbjct: 510 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIK 569
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLPLSYLDLS 88
+ L ++ P +P+ L+++
Sbjct: 570 DQRQLLVEVERMECATPSDKQGMPVLSLNIT 600
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 29/133 (21%), Positives = 42/133 (31%), Gaps = 10/133 (7%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLS--GSIPSEIGNLQELS 60
L++L L + N + L L L LS N LS G L
Sbjct: 319 FPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLE--FLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
+LD + LG+ L +LD ++L + L LI + +S
Sbjct: 377 YLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL----RNLIYLDISHT- 431
Query: 121 FLTFLILGILFFL 133
GI L
Sbjct: 432 HTRVAFNGIFNGL 444
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 23/157 (14%), Positives = 40/157 (25%), Gaps = 14/157 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTL----SNNKLSGSIPSE 52
I L L L N + ++ + L L L L + L S
Sbjct: 191 FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 250
Query: 53 IGNLQEL--SHLDSRHI-FIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKV 108
+ L L ++ + I L +S L + +
Sbjct: 251 LEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQH-- 308
Query: 109 TRLISIVLSINAFLTFLILGILFFLRCKKNKIITKRN 145
L++ L L L F K ++ +
Sbjct: 309 LELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 3e-18
Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 11/108 (10%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKL--------SGSIPS 51
T L+ +L++L + + +P+ L L + ++ N+ +
Sbjct: 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALA 299
Query: 52 EIGNLQELSHLDSRH-IFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP 97
+ +++ + + + L + L L+ +N L G +P
Sbjct: 300 DAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP 347
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 9e-18
Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 8/138 (5%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
+ + L L Y+ + + + + + NL++L+
Sbjct: 197 FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN----SEYAQQYKTEDLKWDNLKDLT 252
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGG-IPKHLTTKLR--RKVTRLISIVL 116
++ + +P L LP + ++++ N G K L ++ I +
Sbjct: 253 DVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI 312
Query: 117 SINAFLTFLILGILFFLR 134
N TF + L ++
Sbjct: 313 GYNNLKTFPVETSLQKMK 330
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
+ + ++ L L N L G +P + G +L L+ N+++ + G +++
Sbjct: 321 PVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQV 379
Query: 60 SHLDSRHIFIKGTIPYPLGVLPLS---YLDLSFNDLSGGIPKHLTT--KLRRKVTRLISI 114
+L H +K IP +S +D S+N++ K+ K + SI
Sbjct: 380 ENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSI 438
Query: 115 VLSINAFLTFLILGIL 130
LS N ++ +
Sbjct: 439 NLSNNQ-ISKFPKELF 453
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 3e-15
Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 13/123 (10%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSG----SIPSEIGNLQEL 59
+ S + L L G +G +P ++G+LT L L ++ P I
Sbjct: 76 SLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSD 135
Query: 60 SHLDSRHIFIKGTIPYPLG---VLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
+ + T L ++ + I K R + I
Sbjct: 136 EQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK-----KSSRITLKDTQIGQ 190
Query: 117 SIN 119
N
Sbjct: 191 LSN 193
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 6e-15
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 24/115 (20%)
Query: 1 TIPLEI--GSLRNLVSLYLSGNNLTGSIPSSLGRLT-------SCTLTLSNNKLSGSIPS 51
+ + +L LV + LS N+ + P+ + N+ P
Sbjct: 502 KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPE 560
Query: 52 EIGNLQELSHLD-SR----HIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
I L+ L + + P +S LD+ N ++
Sbjct: 561 GITLCPSLTQLQIGSNDIRKV--------NEKITPNISVLDIKDNPNISIDLSYV 607
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 1e-14
Identities = 19/109 (17%), Positives = 34/109 (31%), Gaps = 13/109 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSG-------SIPSE 52
+ N+ S+ LS N ++ + ++ L N L+
Sbjct: 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENEN 483
Query: 53 IGNLQELSHLDSRHIFIKGTIPYPLGVLPLS---YLDLSFNDLSGGIPK 98
N L+ +D R + + L +DLS+N S P
Sbjct: 484 FKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFS-KFPT 530
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 14/138 (10%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTG----SIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGN 55
+P IG L L L L + P + S +
Sbjct: 96 RVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPR 155
Query: 56 LQ--ELSHLDSRHIFIKGTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLI 112
+L + +I L + + N+++ + K + ++T+L
Sbjct: 156 EDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT-FVSKAV-----MRLTKLR 209
Query: 113 SIVLSINAFLTFLILGIL 130
+ + F+ I
Sbjct: 210 QFYMGNSPFVAENICEAW 227
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 9/63 (14%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
P I +L L + N++ ++ L + +N S + E
Sbjct: 557 EWPEGITLCPSLTQLQIGSNDIRKVNEKITPNIS--VLDIKDNPNISIDLSYVCPYIEAG 614
Query: 61 HLD 63
Sbjct: 615 MYM 617
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 1e-16
Identities = 32/150 (21%), Positives = 47/150 (31%), Gaps = 9/150 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
L SL + N ++ P +L L L +N+LS L+
Sbjct: 41 PAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT 100
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L I+ P L LDLS N LS ++ L ++LS N
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ-----VQLENLQELLLSNN 155
Query: 120 AFLTFLILGILFFLRCKKNKIIT-KRNSIR 148
+ L L K + N I+
Sbjct: 156 K-IQALKSEELDIFANSSLKKLELSSNQIK 184
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-16
Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
P L L L L N L+ + T+ L L +N + + + L
Sbjct: 65 EPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLI 124
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
LD H + T L L L LS N + + L + L + LS N
Sbjct: 125 TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDI---FANSSLKKLELSSN 181
Query: 120 AFLTFLILGILFFLR 134
+ G +
Sbjct: 182 -QIKEFSPGCFHAIG 195
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 3e-16
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQ--E 58
+NL++L LS N L+ + + +L + L LSNNK+ E+
Sbjct: 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 172
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L L+ IK P + L L L+ L + + L +L T + ++ LS
Sbjct: 173 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELAN--TSIRNLSLS 230
Query: 118 INAFLTFLILGILFFLRC 135
+ L+ L+
Sbjct: 231 NS-QLSTTSNTTFLGLKW 247
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 9/140 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
NL L+L N++ + + + TL LS+N LS + L+ L
Sbjct: 89 SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQ 148
Query: 61 HLDSRHIFIKGTIPYPLGVLPLS---YLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L + I+ L + S L+LS N + P + RL + L+
Sbjct: 149 ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCF-----HAIGRLFGLFLN 203
Query: 118 INAFLTFLILGILFFLRCKK 137
L + L
Sbjct: 204 NVQLGPSLTEKLCLELANTS 223
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 6e-15
Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 10/136 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
+P ++ N+ L L+ N L ++ R + +L + N +S P L L
Sbjct: 18 QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 75
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L+ +H + L+ L L N + K LI++ LS
Sbjct: 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPF-----VKQKNLITLDLSH 130
Query: 119 NAFLTFLILGILFFLR 134
N L+ LG L
Sbjct: 131 N-GLSSTKLGTQVQLE 145
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 1e-14
Identities = 25/130 (19%), Positives = 36/130 (27%), Gaps = 14/130 (10%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLT--------GSIPSSLGRLTS-CTLTLSNNKLSGSIPSE 52
+ L L L L NNL G L L+ L L +N
Sbjct: 496 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 555
Query: 53 IGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRL 111
+L EL +D + L L+L N ++ K L
Sbjct: 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAF----RNL 611
Query: 112 ISIVLSINAF 121
+ + N F
Sbjct: 612 TELDMRFNPF 621
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 8e-14
Identities = 20/100 (20%), Positives = 28/100 (28%), Gaps = 3/100 (3%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
+ L +L L L N L + L N L+ S N L
Sbjct: 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSL 586
Query: 60 SHLDSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSGGIP 97
L+ + I G L+ LD+ FN
Sbjct: 587 KSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 32/152 (21%), Positives = 48/152 (31%), Gaps = 13/152 (8%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
L +L L L N + + L + + LS NK + + L
Sbjct: 397 ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSL 456
Query: 60 SHLDSRHIFIKG--TIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT--TKLRR------KV 108
L R + +K + P P L L+ LDLS N+++ L KL +
Sbjct: 457 QRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL 516
Query: 109 TRLISIVLSINAFLTFLILGILFFLRCKKNKI 140
RL L L L + N
Sbjct: 517 ARLWKHANPGGPIYFLKGLSHLHILNLESNGF 548
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 31/139 (22%), Positives = 44/139 (31%), Gaps = 16/139 (11%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLS--------GSIPSE 52
P LRNL L LS NN+ L L L L +N L+ G
Sbjct: 472 SPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYF 531
Query: 53 IGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRL 111
+ L L L+ L L +DL N+L+ + L
Sbjct: 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQ-----VSL 586
Query: 112 ISIVLSINAFLTFLILGIL 130
S+ L N +T + +
Sbjct: 587 KSLNLQKNL-ITSVEKKVF 604
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLT---LSNNKLSGSIPSEIGNLQELSHLDS 64
+ ++ +L LS + L+ + ++ L LT LS N L+ L +L +
Sbjct: 220 ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLR----RKVTRLISIVLSIN 119
+ I+ + L L + YL+L + I K+ + + L + + N
Sbjct: 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDN 339
Query: 120 AFLTFLILGILFFLR 134
+ + + L
Sbjct: 340 -DIPGIKSNMFTGLI 353
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 32/139 (23%), Positives = 46/139 (33%), Gaps = 8/139 (5%)
Query: 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSG--SIPSEIGNLQEL 59
E L N+ +YLS N +S + S L L L S PS L+ L
Sbjct: 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFN---DLSGGIPKHLTTKLRRKVTRLISIV 115
+ LD + I L L L LDL N L + ++ L +
Sbjct: 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542
Query: 116 LSINAFLTFLILGILFFLR 134
L N + + + L
Sbjct: 543 LESNG-FDEIPVEVFKDLF 560
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 24/111 (21%), Positives = 33/111 (29%), Gaps = 11/111 (9%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS----------CTLTLSNNKLSGSIPS 51
L L +L NN+ SL L + ++S L
Sbjct: 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323
Query: 52 EIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT 101
L+ L HL+ I G L L YL LS + S + T
Sbjct: 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET 374
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-11
Identities = 28/127 (22%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK 70
+ S LT +P L + L L++N+L + +L+ LD I
Sbjct: 5 SHEVADCSHLKLT-QVPDDLPTNIT-VLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS 62
Query: 71 GTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT--TKLRR------KVTRLISIVLSINAF 121
P LP L L+L N+LS K T L + ++ +
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 122 LTFLILG 128
L L L
Sbjct: 123 LITLDLS 129
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 11/122 (9%)
Query: 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIF 68
R+ +S +L S L L + +N + G + L L +L + F
Sbjct: 305 RSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSF 364
Query: 69 IKGTIPYP-----LGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLT 123
L PL L+L+ N +S + L + L +N
Sbjct: 365 TSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF-----SWLGHLEVLDLGLNEIGQ 419
Query: 124 FL 125
L
Sbjct: 420 EL 421
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 14/93 (15%), Positives = 25/93 (26%), Gaps = 6/93 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS--CTLTLSNNKLSGSIPSEIGNLQEL 59
+ +L SL L N +T G L + N + S + +
Sbjct: 576 PASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWI 635
Query: 60 SHLDSRHIFIKGTI----PYPLGVLPLSYLDLS 88
+ + + P P+ D S
Sbjct: 636 NETHTNIPELSSHYLCNTPPHYHGFPVRLFDTS 668
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 4e-16
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
I I L L +Y + + T + K + NL++L+
Sbjct: 439 FISKAIQRLTKLQIIYFANSPFTYDNIAVDWED----ANSDYAKQYENEELSWSNLKDLT 494
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP 97
++ + +P L LP L L+++ N
Sbjct: 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQ 532
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 3e-15
Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 12/105 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSG---------SIP 50
L +L++L + L +P L L L ++ N+ +
Sbjct: 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA 541
Query: 51 SEIGNLQELSHLDSRHIFIKG-TIPYPLGVLP-LSYLDLSFNDLS 93
+ ++ + ++ L + L LD N +
Sbjct: 542 DDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR 586
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 1e-13
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 12/137 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPS-SLGRLTS-CTLTLSNNKLSGSIPSEIGNLQE 58
+ + + + Y+ NNL S SL ++ L +NK+ G +
Sbjct: 539 RLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR--HLEAFGTNVK 596
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
L+ L + I+ IP + L S N L IP + V + S+
Sbjct: 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA---KSVYVMGSVDF 651
Query: 117 SINAFLTFLILGILFFL 133
S N + I +
Sbjct: 652 SYN-KIGSEGRNISCSM 667
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 5e-13
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 20/140 (14%)
Query: 1 TIP--LEIGSLRNLVSLYLSGNNLTG---SIPSSLGRLTSCTLT---LSNNKLSGSIPSE 52
IP S+ + S+ S N + +I S+ + LS N++
Sbjct: 633 YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTEL 692
Query: 53 IGNLQELSHLD-------SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKL 104
+S + S L+ +DL FN L+ +
Sbjct: 693 FATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRA-- 749
Query: 105 RRKVTRLISIVLSINAFLTF 124
+ L ++ +S N F +F
Sbjct: 750 -TTLPYLSNMDVSYNCFSSF 768
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 6e-13
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 18/124 (14%)
Query: 1 TIPLEI--GSLRNLVSLYLSGNNLTGSIPSSLGRLT-------SCTLTLSNNKLSGSIPS 51
++ + +L L ++ +S N + S P+ + N++ P+
Sbjct: 742 SLSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPT 800
Query: 52 EIGNLQELSHLD--SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKV 108
I L L S I + + P L LD++ N + + +
Sbjct: 801 GITTCPSLIQLQIGSNDI---RKVDE--KLTPQLYILDIADNPNISIDVTSVCPYIEAGM 855
Query: 109 TRLI 112
L+
Sbjct: 856 YVLL 859
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 9e-13
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 18/134 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC--TLTLSNNKLSGSIPS--EIGNL 56
+ G+ L L L N + IP T L S+NKL IP+ ++
Sbjct: 587 HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV 643
Query: 57 QELSHLDSRHIFIKGTIPYPLGVLP------LSYLDLSFNDLSGGIPKHLTTKLRRKVTR 110
+ +D + I + S + LS+N++ P L +
Sbjct: 644 YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATG----SP 698
Query: 111 LISIVLSINAFLTF 124
+ +I+LS N +
Sbjct: 699 ISTIILSNNLMTSI 712
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 9e-12
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 19/141 (13%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLS-------GSIPSEI 53
++ N ++ LS N + + T+ LSNN ++
Sbjct: 665 CSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNY 724
Query: 54 GNLQELSHLDSRHIFIKGTIPYPLGV--LP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTR 110
N L+ +D R + ++ LP LS +D+S+N S P ++
Sbjct: 725 KNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS-SFPTQP-----LNSSQ 777
Query: 111 LISIVLSINAFLTF-LILGIL 130
L + + IL
Sbjct: 778 LKAFGIRHQRDAEGNRILRQW 798
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 4e-10
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 4/129 (3%)
Query: 20 NNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD-SRHIFIKGTIPYPLG 78
+ G + GR+T L+L+ G +P IG L EL L H +
Sbjct: 312 GDQPGVDLDNNGRVTG--LSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDE 369
Query: 79 VLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFLILGILFFLRCKKN 138
L + + + K + +++ + +IN + + K
Sbjct: 370 ELTPDMSEERKHRIRMHYKK-MFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428
Query: 139 KIITKRNSI 147
+I N I
Sbjct: 429 QIGNLTNRI 437
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 8e-10
Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
+++ + + L L+G G +P ++G+LT L+ + + S
Sbjct: 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPD 374
Query: 61 HLDSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSG 94
+ R I+ L+ DL + ++
Sbjct: 375 MSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINR 410
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 7e-09
Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 15/138 (10%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSE-IGNLQE 58
+P IG L L L ++ T S LT +++ + Q
Sbjct: 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQR 397
Query: 59 LSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSG------GIPKHLTTKLRRKVTRLI 112
L+ D I P + S + L + I K + +++T+L
Sbjct: 398 LNLSDLLQDAINR-NPEMKPIKKDSRISLKDTQIGNLTNRITFISKAI-----QRLTKLQ 451
Query: 113 SIVLSINAFLTFLILGIL 130
I + + T+ + +
Sbjct: 452 IIYFANS-PFTYDNIAVD 468
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 17/141 (12%), Positives = 34/141 (24%), Gaps = 26/141 (18%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
+ L + S L + N+++ I I L +L
Sbjct: 393 DYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT-FISKAIQRLTKLQ 451
Query: 61 HLD-------------------SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
+ S + L L+ ++L +P L
Sbjct: 452 IIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFL 511
Query: 101 TTKLRRKVTRLISIVLSINAF 121
+ L S+ ++ N
Sbjct: 512 Y-----DLPELQSLNIACNRG 527
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
P + L +L + + L +P ++ + TLTL+ N L ++P+ I +L L
Sbjct: 95 QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRL 152
Query: 60 SHLDSRHIFIKGTIPYPLGVLP----------LSYLDLSFNDLS 93
L R +P PL L L L + +
Sbjct: 153 RELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR 196
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 6e-15
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSN-NKLSGSIPSEIGNLQE 58
+ I L L L L G + P G L L + + L ++P +I L +
Sbjct: 220 ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQ 278
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
L LD R +P + LP + + + L + +H
Sbjct: 279 LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH-LQAQLDQHR 320
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 13/104 (12%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGN---- 55
+P + L +L L+ N L ++P+S+ L L++ +P + +
Sbjct: 118 ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176
Query: 56 -----LQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L L L I+ ++P + L L L + + LS
Sbjct: 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 13/111 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC----------TLTLSNNKLSGSIP 50
+P I SL L L + +P L + +L L + S+P
Sbjct: 141 ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLP 199
Query: 51 SEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
+ I NLQ L L R+ + + + LP L LDL P
Sbjct: 200 ASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIF 249
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 6e-12
Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
P G L L L + ++P + RLT L L +PS I L
Sbjct: 244 NYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303
Query: 60 SHLDSRHIFIKGTIPYPLGVLP 81
+ + P
Sbjct: 304 CIILVPPHLQAQLDQHRPVARP 325
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 5/97 (5%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHL 62
LE + V+L L L P RL+ +T+ L +P + L L
Sbjct: 75 LEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETL 132
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPK 98
++ +P + L L L + +P+
Sbjct: 133 TLARNPLR-ALPASIASLNRLRELSIRACPELTELPE 168
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 5e-08
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLS-------GSIPSE 52
T+PL+I L L L L G +PS + +L + C + + + + + P+E
Sbjct: 268 TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 10/92 (10%), Positives = 17/92 (18%), Gaps = 7/92 (7%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+LY G+ L + ++ N
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQR--HYNADRNRW-HSAWRQANSNNPQIETR 63
Query: 65 RHIFIKGTIPYPLGVLP---LSYLDLSFNDLS 93
+K L L+L L
Sbjct: 64 TGRALK-ATADLLEDATQPGRVALELRSVPLP 94
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 9e-15
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 34/133 (25%)
Query: 277 ELEAFVADFGMTMHLYCDSSNL-TLLAGTYGY------------EKCDVYSFGVVALEIL 323
E EA V DFG+ + +++ T + GT G+ EK DV+ +GV+ LE++
Sbjct: 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 229
Query: 324 MGRQPGELLSSLSSSSSSDQNIMLLD-------------VLDPRLSPPVDRMVVRDIVLV 370
G++ +L + ++D ++MLLD ++D L V ++ V
Sbjct: 230 TGQRAFDL-----ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQV 284
Query: 371 STILFACLRSNPK 383
+ C +S+P
Sbjct: 285 A---LLCTQSSPM 294
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 1e-09
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQN 220
RF ++ A+++F K G GG+G VY +L ++A+K+L FQ
Sbjct: 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT--QGGELQFQT 76
Query: 221 EVDIL 225
EV+++
Sbjct: 77 EVEMI 81
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 8e-14
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
L +L +L L+GN + P S LTS L KL+ IG L L
Sbjct: 72 EDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLK 131
Query: 61 HLDSRHIFIKG-TIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L+ H FI +P L L ++DLS+N + I + LR +S+ +S+
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ-TITVNDLQFLRENPQVNLSLDMSL 190
Query: 119 NAFLTFLILGIL 130
N + F+
Sbjct: 191 N-PIDFIQDQAF 201
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 10/152 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
+ L L LS + + L L L+ N + P L L
Sbjct: 48 KSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLE 107
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+L + + +P+G L L L+++ N + + L T L+ + LS N
Sbjct: 108 NLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNL----TNLVHVDLSYN 163
Query: 120 AFLTFLILGILFFLRCKKNKIIT---KRNSIR 148
++ + + L FLR ++ N I
Sbjct: 164 -YIQTITVNDLQFLRENPQVNLSLDMSLNPID 194
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 10/133 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
+P +I S + ++ LS N L S + L LS ++ L L
Sbjct: 25 KVPDDIPS--STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
S+L I+ P L L L L+ + +L L + ++
Sbjct: 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA-SLESFPIGQL----ITLKKLNVAH 137
Query: 119 NAFLTFLILGILF 131
N F+ L F
Sbjct: 138 N-FIHSCKLPAYF 149
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-11
Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
+ + NL L LS L L L +S+N L S L LS
Sbjct: 465 LSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
LD I+ + L++ +L+ N ++
Sbjct: 525 TLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
SL L+ L +S N LTS TL ++ N + S + N L+ LD
Sbjct: 420 FLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFL 122
++ L L L++S N+L H ++ L ++ S N +
Sbjct: 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY-----NQLYSLSTLDCSFNR-I 533
Query: 123 TFLILGILFFLR 134
+ F +
Sbjct: 534 ETSKGILQHFPK 545
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 11/135 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLT---LSNNKLSGSIPSEIGNLQ 57
+I + +L +L L LS N L+ S S L + +L LS N + + L+
Sbjct: 341 SISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLE 399
Query: 58 ELSHLDSRHIFIKGTIP-YPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
EL HLD +H +K L L YLD+S+ + + L T L ++
Sbjct: 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK-IDFDGIFLGL----TSLNTLK 454
Query: 116 LSINAFLTFLILGIL 130
++ N+F + +
Sbjct: 455 MAGNSFKDNTLSNVF 469
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 28/134 (20%), Positives = 43/134 (32%), Gaps = 10/134 (7%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
+ I + N+ + L+ +P + T + LS N L N EL
Sbjct: 4 LNPCIEVVPNI-TYQCMDQKLS-KVPDDIPSSTK-NIDLSFNPLKILKSYSFSNFSELQW 60
Query: 62 LDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
LD I+ L LS L L+ N + P +T L ++V
Sbjct: 61 LDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSF-----SGLTSLENLVAVET- 114
Query: 121 FLTFLILGILFFLR 134
L L + L
Sbjct: 115 KLASLESFPIGQLI 128
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 11/162 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-----TLTLSNNKLSGSIPSEIGNL 56
+P +L NLV + LS N + + L L +L +S N + I +
Sbjct: 145 LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQG 203
Query: 57 QELSHLDSRHIFIKGTIPYPL--GVLPLSYLDLSFNDLSGGIP-KHLTTKLRRKVTRLIS 113
+L L R F I + L L + + + + +
Sbjct: 204 IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTI 263
Query: 114 IVLSINAFLTFLILGILFFLRCKKNKIIT-KRNSIRRDNEFS 154
+ + I+ F ++ SI+ +
Sbjct: 264 DEFRLT-YTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVP 304
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 7e-08
Identities = 31/135 (22%), Positives = 42/135 (31%), Gaps = 12/135 (8%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPS--EIGNLQELS 60
L L SL L+ N + S +L L+ L LS N LS S L
Sbjct: 322 FPTLDLPFLKSLTLTMNKGSISFKKVALPSLS--YLDLSRNALSFSGCCSYSDLGTNSLR 379
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
HLD + L L +LD + L L +L+ + +S
Sbjct: 380 HLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL----EKLLYLDISYT 434
Query: 120 AFLTFLILGILFFLR 134
GI L
Sbjct: 435 -NTKIDFDGIFLGLT 448
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 11/104 (10%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLT----LSNNKLSGSIPSE 52
I + L L L GN + +I + L L L L PS
Sbjct: 195 FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSI 254
Query: 53 IGNLQELS--HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ L +++ + L +S + L+ +
Sbjct: 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK 298
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 24 GSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82
GS+ + + + T + KLS +P +I + ++D +K Y L
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLS-KVPDDIPS--STKNIDLSFNPLKILKSYSFSNFSEL 58
Query: 83 SYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFLILGILFFLR 134
+LDLS ++ K + L +++L+ N + G L
Sbjct: 59 QWLDLSRCEIETIEDKAW-----HGLHHLSNLILTGNP-IQSFSPGSFSGLT 104
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-13
Identities = 44/297 (14%), Positives = 83/297 (27%), Gaps = 92/297 (30%)
Query: 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDI- 224
++ + + G +G V+ AQL + V A+K +S+QNE ++
Sbjct: 18 NLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYV-AVKIFP------IQDKQSWQNEYEVY 70
Query: 225 LYPKYDIETLLSFMDFVCIKDACFW--------FMNTWRGEACSVFCTMIMKPLSWI--- 273
P E +L F+ + F +G S+ + +SW
Sbjct: 71 SLPGMKHENILQFIGA-EKRGTSVDVDLWLITAFHE--KG---SLSDFLKANVVSWNELC 124
Query: 274 --------GL-------------------------------RELEAFVADFGMTMHLYCD 294
GL L A +ADFG+ +
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 295 SSNL--TLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPG-----E 330
S GT Y + D+Y+ G+V E+ E
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
Query: 331 LLSSLSSSSSSDQNI--MLLDVLDPRLSPPVDRMVVRDIVL--VSTILFACLRSNPK 383
+ ++ M V+ + P + + + + + C + +
Sbjct: 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 3e-13
Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 8/135 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
L NL L L+ + + TL L+ N L + + + L
Sbjct: 49 QNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALK 108
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
HL I PL L L L N +S I +L + N
Sbjct: 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPT----EKLKVLDFQNN 163
Query: 120 AFLTFLILGILFFLR 134
+ +L + L+
Sbjct: 164 -AIHYLSKEDMSSLQ 177
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 9/120 (7%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT----LTLSNNKLSGSIPSEIGNLQELSH 61
L L L L GN+ L + L LS LS +L+ ++H
Sbjct: 445 FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504
Query: 62 LDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
+D H + + L L YL+L+ N +S +P L +++ +I L N
Sbjct: 505 VDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLL-----PILSQQRTINLRQNPL 559
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 24/136 (17%), Positives = 40/136 (29%), Gaps = 10/136 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
IP + + L S N L ++ RL + T L L+ ++ + L
Sbjct: 26 EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRL 83
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L + L L +L +S L L S+ L
Sbjct: 84 DTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPL-----HNQKTLESLYLGS 138
Query: 119 NAFLTFLILGILFFLR 134
N ++ + L F
Sbjct: 139 NH-ISSIKLPKGFPTE 153
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 35/137 (25%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
L L L+ L +L L L LS++ L S L L H
Sbjct: 396 FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLK--VLNLSHSLLDISSEQLFDGLPALQH 453
Query: 62 LDSRHIFIKGTIPYPLGVLP----LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L+ + L L L LSF DLS I +H T L + + LS
Sbjct: 454 LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS-SIDQHAFTSL----KMMNHVDLS 508
Query: 118 INAFLTFLILGILFFLR 134
N LT + L L+
Sbjct: 509 HNR-LTSSSIEALSHLK 524
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 16/151 (10%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSE-IGNLQE 58
+P + L L L LS N S S L++ N + + + NL+
Sbjct: 292 ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351
Query: 59 LSHLDSRHIFIKGTIPYP--LGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
L LD H I+ + L L L L+LS+N+ L T+ ++ +L +
Sbjct: 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL-----SLKTEAFKECPQLELLD 406
Query: 116 LS------INAFLTFLILGILFFLRCKKNKI 140
L+ +A F L +L L + +
Sbjct: 407 LAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL 437
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-09
Identities = 22/122 (18%), Positives = 32/122 (26%), Gaps = 9/122 (7%)
Query: 14 SLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI 73
+ L IP +L T L S N L + L L+ LD I
Sbjct: 16 TYNCENLGLN-EIPGTLPNSTE-CLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 74 PYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFLILGILFF 132
L L L+ N L L L + ++ + L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETAL-----SGPKALKHLFFIQT-GISSIDFIPLHN 127
Query: 133 LR 134
+
Sbjct: 128 QK 129
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
SL+ + + LS N LT S +L L L L++N +S +PS + L +
Sbjct: 492 DQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRT 551
Query: 62 LD 63
++
Sbjct: 552 IN 553
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 10/135 (7%)
Query: 4 LEIGSLRNLVSLYLSGNNLTG---SIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
L+ ++++L + ++ L ++ ++ L + + L
Sbjct: 222 LKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
LD + +P L L L L LS N + + + L + + N
Sbjct: 282 ELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFE-NLCQISASNF----PSLTHLSIKGN 335
Query: 120 AFLTFLILGILFFLR 134
L G L L
Sbjct: 336 TKRLELGTGCLENLE 350
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 19/139 (13%), Positives = 32/139 (23%), Gaps = 11/139 (7%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT---LTLSNNKLSGSIPSEIGNLQE 58
+ L L N + + L T L L+ N ++ I +
Sbjct: 145 KLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA-GIEPGAFDSAV 203
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP---LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
L+ I L L D I + L + SI
Sbjct: 204 FQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDE-DISPAVFEGLCE--MSVESIN 260
Query: 116 LSINAFLTFLILGILFFLR 134
L + + +
Sbjct: 261 LQKH-YFFNISSNTFHCFS 278
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 7e-08
Identities = 30/154 (19%), Positives = 45/154 (29%), Gaps = 17/154 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS---CTLTLSNNKLSGSIPSEIGNLQ 57
I SL G I L T T + P+ L
Sbjct: 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252
Query: 58 ELS--HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
E+S ++ + + L LDL+ LS +P L ++ L +
Sbjct: 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGL-----VGLSTLKKL 306
Query: 115 VLSINAF-----LTFLILGILFFLRCKKNKIITK 143
VLS N F ++ L L K N +
Sbjct: 307 VLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-07
Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 12/124 (9%)
Query: 3 PLEIGSLRNL--VSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIP-----SEIGN 55
++ SL+ +SL L+GN++ G P + +L + I S I +
Sbjct: 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQS 229
Query: 56 LQELSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
L + D I + L + + ++L + + L +
Sbjct: 230 LWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTF-----HCFSGLQELD 284
Query: 116 LSIN 119
L+
Sbjct: 285 LTAT 288
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 2e-12
Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 12/145 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS--LGRLTSCTLTLSNNKLSGSIPSEIGNLQE 58
S L L L N + + +L TL LS+NKL+ + E +
Sbjct: 160 NFAELAASSDTLEHLNLQYNFIY-DVKGQVVFAKLK--TLDLSSNKLA-FMGPEFQSAAG 215
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
++ + R+ + I L L + DL N G + K R+ ++
Sbjct: 216 VTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR----DFFSKNQRVQTVAKQ 270
Query: 118 INAFLTFLILGILFFLRCKKNKIIT 142
LT
Sbjct: 271 TVKKLTGQNEEECTVPTLGHYGAYC 295
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 7e-10
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 9/118 (7%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSG-SIPSEIGNLQELSH 61
+ + ++YL+ N +T G + L L N++ + + L H
Sbjct: 114 VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 62 LDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L+ ++ FI + + L LDLS N L+ + + I L N
Sbjct: 174 LNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA-FMGPEFQ-----SAAGVTWISLRNN 224
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 6/130 (4%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
I + ++ ++L ++ S + L LS N LS +++ +L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG-GIPKHLTTKLRRKVTRLISIVLSI 118
L+ + L L L LDL+ N + + + T L + + S
Sbjct: 62 LLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQELLVGPSIET-LHAANNNISRVSCSR 118
Query: 119 NAFLTFLILG 128
+ L
Sbjct: 119 GQGKKNIYLA 128
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 1 TIPLEIGS-LRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQE 58
+ N+ L LSGN L+ + L T L LS+N L ++ +L
Sbjct: 24 QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLST 81
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR 106
L LD + +++ L V P + L + N++S + +
Sbjct: 82 LRTLDLNNNYVQE-----LLVGPSIETLHAANNNIS-RVSCSRGQGKKN 124
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 1e-11
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 12/137 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS--LGRLTSCTLTLSNNKLSGSIPSEIGNLQE 58
S L L L N + + +L TL LS+NKL+ + E +
Sbjct: 160 NFAELAASSDTLEHLNLQYNFIY-DVKGQVVFAKLK--TLDLSSNKLA-FMGPEFQSAAG 215
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
++ + R+ + I L L + DL N G + +K R+ ++
Sbjct: 216 VTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN----QRVQTVAKQ 270
Query: 118 INAFLTFLILGILFFLR 134
LT
Sbjct: 271 TVKKLTGQNEEECTVPT 287
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 8e-10
Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 6/107 (5%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSG-SIPSEIGNLQELSH 61
+ + ++YL+ N +T G + L L N++ + + L H
Sbjct: 114 VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 62 LDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLT--TKLRR 106
L+ ++ FI + + L LDLS N L+ + +
Sbjct: 174 LNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTW 218
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 2e-09
Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 6/130 (4%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
I + ++ ++L ++ S + L LS N LS +++ +L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG-GIPKHLTTKLRRKVTRLISIVLSI 118
L+ + L L L LDL+ N + + + T L + + S
Sbjct: 62 LLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQELLVGPSIET-LHAANNNISRVSCSR 118
Query: 119 NAFLTFLILG 128
+ L
Sbjct: 119 GQGKKNIYLA 128
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 4e-09
Identities = 24/132 (18%), Positives = 39/132 (29%), Gaps = 6/132 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLS-GSIPSEIGNLQE 58
+ E S + + L N L I +L + L N G++ Q
Sbjct: 205 FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQR 263
Query: 59 LSHLDSRHI-FIKGTIPYPLGVLPLSYL-DLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
+ + + + + G V L + DL L L+RK L+S
Sbjct: 264 VQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRL-IALKRKEHALLSGQG 322
Query: 117 SINAFLTFLILG 128
S L
Sbjct: 323 SETERLECEREN 334
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 1e-08
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 1 TIPLEIGS-LRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQE 58
+ N+ L LSGN L+ + L T L LS+N L ++ +L
Sbjct: 24 QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLST 81
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR 106
L LD + +++ L V P + L + N++S + +
Sbjct: 82 LRTLDLNNNYVQE-----LLVGPSIETLHAANNNIS-RVSCSRGQGKKN 124
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 7e-07
Identities = 21/157 (13%), Positives = 40/157 (25%), Gaps = 7/157 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
I + +NL L GN T++ + +
Sbjct: 228 LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPT 287
Query: 61 HLDSRHIFIKGT-IPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+ P+ ++ L + + G + L R R I
Sbjct: 288 LGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLEC-ERENQARQREIDALKE 346
Query: 120 AFLT-----FLILGILFFLRCKKNKIITKRNSIRRDN 151
+ T L L KK + + ++ RR +
Sbjct: 347 QYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAH 383
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 1e-11
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 36/132 (27%)
Query: 277 ELEAFVADFGM--TMHLYCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEIL 323
A ++DFG+ + + + + GT Y K D+YSFGVV LEI+
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 228
Query: 324 MGRQPGELLSSLSSSSSSDQNIM------------LLDVLDPRLSPPVDRMVVRDIVLVS 371
G Q ++ + D +D +++ V +
Sbjct: 229 TGLPA-------VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEA----MY 277
Query: 372 TILFACLRSNPK 383
++ CL
Sbjct: 278 SVASQCLHEKKN 289
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 161 RFVFGDIIEATEDFDIKYCF------GTGGYGSVYIAQLTSSKVIALKKLHHWENEEPAS 214
F F ++ T +FD + G GG+G VY + ++ +A+KKL +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 215 -TRSFQNEVDIL 225
+ F E+ ++
Sbjct: 73 LKQQFDQEIKVM 84
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 21/117 (17%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT--------------LTLSNNKLS 46
+P+E ++++ Y + + + P G L L+N LS
Sbjct: 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS 84
Query: 47 GSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTT 102
S+P +L+ L + +P L L + + LS +P L
Sbjct: 85 -SLPELPPHLESL-VASCNSL---TELPELPQSLKSLLVDNNNLKALS-DLPPLLEY 135
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 24/155 (15%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
E+ +L L ++Y N L ++P L + L + +N L+ +P +L L
Sbjct: 228 EELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEA--LNVRDNYLT-DLPELPQSLTFLD 283
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSG--GIPKHLT---------TKLRRKVT 109
++ + P L YL+ S N++ +P L +L
Sbjct: 284 VSENIFSGLSELPPN------LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPP 337
Query: 110 RLISIVLSINAFLTFLILGI--LFFLRCKKNKIIT 142
RL ++ S N L + L L + N +
Sbjct: 338 RLERLIASFN-HLAEVPELPQNLKQLHVEYNPLRE 371
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
E+ +L L ++Y N+L +P L ++ NN L E+ NL L+ + +
Sbjct: 190 ELQNLPFLTAIYADNNSLK-KLPDLPLSLE--SIVAGNNIL--EELPELQNLPFLTTIYA 244
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTF 124
+ +K T+P L L++ N L T L L + +S N +
Sbjct: 245 DNNLLK-TLPDLPPS--LEALNVRDNYL---------TDLPELPQSLTFLDVSEN-IFSG 291
Query: 125 L--ILGILFFLRCKKNKI 140
L + L++L N+I
Sbjct: 292 LSELPPNLYYLNASSNEI 309
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 12/93 (12%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
I S L +NLT +P + S T + ++ + P G +E++
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLS 93
R + L+L+ LS
Sbjct: 62 VSRLRDCLDRQ----------AHELELNNLGLS 84
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 13/103 (12%), Positives = 26/103 (25%), Gaps = 22/103 (21%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-----------------CTLTLSNN 43
+P +L+ L++ N L P + L + N
Sbjct: 351 EVPELPQNLK---QLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETN 406
Query: 44 KLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLPLSYLD 86
L P ++++L R + L +
Sbjct: 407 PLR-EFPDIPESVEDLRMNSERVVDPYEFAHETTDKLEDDVFE 448
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 2e-11
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 25/144 (17%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
++P+ L L +L ++PS L C L + N+L+ S+P LQELS
Sbjct: 95 SLPVLPPGLLELSIFSNPLTHLP-ALPSGL-----CKLWIFGNQLT-SLPVLPPGLQELS 147
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
D++ + L L N L T L + L + +S N
Sbjct: 148 VSDNQLASLPALPS------ELCKLWAYNNQL---------TSLPMLPSGLQELSVSDNQ 192
Query: 121 FLTFL--ILGILFFLRCKKNKIIT 142
L L + L+ L N++ +
Sbjct: 193 -LASLPTLPSELYKLWAYNNRLTS 215
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 3e-11
Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 21/153 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
++P L L+ N LT S+P+ L L +S N+L+ S+P L+EL
Sbjct: 195 SLPTLPSELYK---LWAYNNRLT-SLPALPSGLKE--LIVSGNRLT-SLPVLPSELKEL- 246
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
+ + ++P L L + N L+ +P+ L ++ ++ L N
Sbjct: 247 MVSGNRL---TSLPMLPS--GLLSLSVYRNQLT-RLPESLI-----HLSSETTVNLEGNP 295
Query: 121 F--LTFLILGILFFLRCKKNKIITKRNSIRRDN 151
T L + II +
Sbjct: 296 LSERTLQALREITSAPGYSGPIIRFDMAGASAP 328
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 1e-10
Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 21/149 (14%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGR-LTSCTLTLSNNKLSGSIPSEIGNLQELSHL 62
+ L + + LT ++P L +T TL + +N L+ S+P+ L+ L +
Sbjct: 34 MRACLNNGNAVLNVGESGLT-TLPDCLPAHIT--TLVIPDNNLT-SLPALPPELRTL-EV 88
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT---------TKLRRKVTRLI 112
+ ++P L LS L +P L T L L
Sbjct: 89 SGNQL---TSLPVLPPGLLELSIFSNPLTHLP-ALPSGLCKLWIFGNQLTSLPVLPPGLQ 144
Query: 113 SIVLSINAFLTF-LILGILFFLRCKKNKI 140
+ +S N + + L L N++
Sbjct: 145 ELSVSDNQLASLPALPSELCKLWAYNNQL 173
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLT----LSNNKLSGSIPSEIGNL 56
+P + L + ++ L GN L+ +L +TS + + S P E L
Sbjct: 275 RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRAL 334
Query: 57 QELS 60
+
Sbjct: 335 HLAA 338
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 4e-11
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD- 63
I L NL L + G ++T +L LTS L +S++ SI ++I L +++ +D
Sbjct: 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
S + I T PL LP L L++ F+ +
Sbjct: 144 SYNGAI--TDIMPLKTLPELKSLNIQFDGVH 172
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
I N+ L ++ + T P S L L L + ++ + L L+ LD
Sbjct: 62 IEYAHNIKDLTINNIHATNYNPISGLSNLER--LRIMGKDVTSDKIPNLSGLTSLTLLDI 119
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFN 90
H +I + LP ++ +DLS+N
Sbjct: 120 SHSAHDDSILTKINTLPKVNSIDLSYN 146
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 5e-08
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 11/125 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
T + + +L + L+ N+T + + + + LT++N + + I L L
Sbjct: 35 TANITEAQMNSLTYITLANINVT-DL-TGIEYAHNIKDLTINNIHATNY--NPISGLSNL 90
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L + L L L+ LD+S + I + + ++ SI LS
Sbjct: 91 ERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN-----TLPKVNSIDLSY 145
Query: 119 NAFLT 123
N +T
Sbjct: 146 NGAIT 150
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLD 63
+ L +L L +S + SI + + L + LS N I + L EL L+
Sbjct: 107 NLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLN 165
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG 94
+ + + P L+ L + G
Sbjct: 166 IQFDGVHDYR--GIEDFPKLNQLYAFSQTIGG 195
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 7e-11
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 33/132 (25%)
Query: 277 ELEAFVADFGMT-MHLYCDSSNL-TLLAGTYGY------------EKCDVYSFGVVALEI 322
+ DFG++ D ++L T++ GT GY EK DVYSFGVV E+
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 323 LMGRQPGELLSSLSSSSSSDQNI-----------MLLDVLDPRLSPPVDRMVVRDIVLVS 371
L R + S N+ L ++DP L+ + +R +
Sbjct: 235 LCARSA-----IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTA 289
Query: 372 TILFACLRSNPK 383
CL + +
Sbjct: 290 ---VKCLALSSE 298
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 6e-09
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Query: 136 KKNKIITKRNSIRRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTS 195
K T + + + V R D+ EAT +FD K+ G G +G VY L
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 196 SKVIALKKLHHWENEEPAS---TRSFQNEVDIL 225
+ALK+ P S F+ E++ L
Sbjct: 63 GAKVALKRRT------PESSQGIEEFETEIETL 89
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 9e-11
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 31/137 (22%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
++P SL L N L+ ++P L L + NN+L+ +P L+ +
Sbjct: 94 SLPELPASLEY---LDACDNRLS-TLPELPASLKH--LDVDNNQLT-MLPELPALLEYI- 145
Query: 61 HLDSRHIFIKGTIPY-------------PLGVLP-----LSYLDLSFNDLSGGIPKHLTT 102
+ D+ + +P L LP L LD+S N L +P
Sbjct: 146 NADNNQL---TMLPELPTSLEVLSVRNNQLTFLPELPESLEALDVSTNLLE-SLPAVP-V 200
Query: 103 KLRRKVTRLISIVLSIN 119
+ I N
Sbjct: 201 RNHHSEETEIFFRCREN 217
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 8e-10
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGR-LTSCTLTLSNNKLSGSIPSEIGNLQELSHL 62
L+ + L L+ NL+ S+P +L +T L ++ N L S+P +L+ L
Sbjct: 53 LKECLINQFSELQLNRLNLS-SLPDNLPPQIT--VLEITQNALI-SLPELPASLEYLDAC 108
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLS 93
D+R + L +LD+ N L+
Sbjct: 109 DNRLSTLPELPAS------LKHLDVDNNQLT 133
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-----LTLSNNKLSGSIPSEIGNLQELSHL 62
+L +L +S N L S+P+ R N+++ IP I +L +
Sbjct: 178 LPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTI 235
Query: 63 D 63
Sbjct: 236 I 236
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 1 TIPLEIGSLRNL----VSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGN 55
++P + + N +T IP ++ L CT+ L +N LS I +
Sbjct: 194 SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252
Query: 56 LQELSHLDSRHIFI 69
I+
Sbjct: 253 QTAQPDYHGPRIYF 266
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 8e-04
Identities = 14/68 (20%), Positives = 20/68 (29%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
IP I SL ++ L N L+ I SL + T+ + L
Sbjct: 221 HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPL 280
Query: 61 HLDSRHIF 68
F
Sbjct: 281 ADAVTAWF 288
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 2e-10
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ L L L + N ++ S L L+ +L L+NN+L IG L L+ L
Sbjct: 260 AVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
I P L L + D + +
Sbjct: 318 LSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 3e-10
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ +L L L + N ++ +++ LT L + +N++S S + NL +L+ L
Sbjct: 238 PLANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLF 293
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP-KHLT 101
+ + +G L L+ L LS N ++ P L+
Sbjct: 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLS 333
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 1e-09
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 21/147 (14%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
T + L ++ L ++G + SI + LT+ L L+ N+++ P + NL +L
Sbjct: 35 TDVVTQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKL 90
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP-KHLTTKLRRKVTRLISIVLS 117
++L I T L L L L L+ +++S P +L T++ S+ L
Sbjct: 91 TNLYIGTNKI--TDISALQNLTNLRELYLNEDNISDISPLANL--------TKMYSLNLG 140
Query: 118 INAFLTFLI----LGILFFLRCKKNKI 140
N L+ L + L +L ++K+
Sbjct: 141 ANHNLSDLSPLSNMTGLNYLTVTESKV 167
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 3e-09
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ +L + SL L N+ S S L +T LT++ +K+ P I NL +L L
Sbjct: 127 PLANLTKMYSLNLGANHNL-SDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLS 183
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLR 105
+ I+ I PL L L Y N ++ P T+L
Sbjct: 184 LNYNQIED-IS-PLASLTSLHYFTAYVNQITDITPVANMTRLN 224
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 4e-09
Identities = 17/96 (17%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
+ + ++ L L ++ + + P ++L L S L+L+ N++ P + +L L
Sbjct: 146 SDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYS--LSLNYNQIEDISP--LASLTSL 201
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG 94
+ + I P+ + L+ L + N ++
Sbjct: 202 HYFTAYVNQITDIT--PVANMTRLNSLKIGNNKITD 235
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 6e-09
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
T + +L NL LYL+ +N++ P ++L ++ +L L N S S + N+ L
Sbjct: 101 TDISALQNLTNLRELYLNEDNISDISPLANLTKMY--SLNLGANHNL-SDLSPLSNMTGL 157
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP 97
++L +K P+ L L L L++N + P
Sbjct: 158 NYLTVTESKVKDVT--PIANLTDLYSLSLNYNQIEDISP 194
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ ++ L SL + N +T P L L+ T L + N++S + + +L +L L+
Sbjct: 217 VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNV 272
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT--TKLR 105
I I L L L+ L L+ N L + + T L
Sbjct: 273 GSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLS 46
IG L NL +L+LS N++T P +SL ++ + +N +
Sbjct: 303 DMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMD--SADFANQVIK 346
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 10/147 (6%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDSR 65
S L L LS + + L+ TL L+ N + L L L +
Sbjct: 49 FSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108
Query: 66 HIFIKGTIPYPLGVLP-LSYLDLSFNDL-SGGIPKHLTTKLRRKVTRLISIVLSINAF-- 121
+ +P+G L L L+++ N + S +P++ +T L + LS N
Sbjct: 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF-----SNLTNLEHLDLSSNKIQS 163
Query: 122 LTFLILGILFFLRCKKNKIITKRNSIR 148
+ L +L + + N +
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMN 190
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 7e-10
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
SL +L +L L+GN + + L+S L L+ IG+L+ L L+
Sbjct: 72 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131
Query: 65 RHIFIK-GTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFL 122
H I+ +P L L +LDLS N + I L + +S+ LS+N +
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLN-PM 189
Query: 123 TFLILGILFFLR 134
F+ G +R
Sbjct: 190 NFIQPGAFKEIR 201
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 27/134 (20%), Positives = 42/134 (31%), Gaps = 10/134 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS-LGRLTSCT-LTLSNNKLSGSIPSEIGNLQE 58
T+ L L L +NL S L + L +S+ + L
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 59 LSHLDSRHIFIKGTI-PYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
L L + P L L++LDLS L + L + L + +
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSL----SSLQVLNM 501
Query: 117 SINAFLTFLILGIL 130
+ N L + GI
Sbjct: 502 ASNQ-LKSVPDGIF 514
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQELSHLDSR 65
SLRNL+ L +S + + L+S L ++ N + +I L+ L+ LD
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 66 HIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
++ P L L L+++ N L +P + +L T L I L N +
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRL----TSLQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 10/121 (8%)
Query: 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI--GNLQEL 59
+L L LS N + ++ S+ L L ++ L + +L+ L
Sbjct: 366 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNL 423
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
+LD H + L L L ++ N + T+L L + LS
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL----RNLTFLDLSQ 479
Query: 119 N 119
Sbjct: 480 C 480
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 10/132 (7%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP + + +L LS N L S L LS ++ +L LS
Sbjct: 22 IPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L I+ L L L +L+ + L L + ++ N
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHL----KTLKELNVAHN 134
Query: 120 AFLTFLILGILF 131
+ L F
Sbjct: 135 -LIQSFKLPEYF 145
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 4e-08
Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 13/134 (9%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKL-SGSIPSEIGNLQELSHLDSR 65
L +L L NL +G L + L +++N + S +P NL L HLD
Sbjct: 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLS 157
Query: 66 HIFIKGTIPYPLGVLP-----LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
I+ L VL LDLS N ++ I ++ RL + L N
Sbjct: 158 SNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEI-----RLHKLTLRNNF 211
Query: 121 FLTFLILGILFFLR 134
++ + L
Sbjct: 212 DSLNVMKTCIQGLA 225
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 11/132 (8%)
Query: 8 SLRNLVSLYLSGNNLT--GSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
L +L L LS N L+ G S TS L LS N + ++ S L++L HLD
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 403
Query: 65 RHIFIKGTIP-YPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFL 122
+H +K L L YLD+S + L + L + ++ N+F
Sbjct: 404 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGL----SSLEVLKMAGNSFQ 458
Query: 123 TFLILGILFFLR 134
+ I LR
Sbjct: 459 ENFLPDIFTELR 470
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 6e-07
Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 9 LRNLVSLYLSGNNLTGSIPS-SLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQELSHLDSR 65
L +L L ++GN+ + L + L LS +L + +L L L+
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMA 502
Query: 66 HIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+K L L + L N
Sbjct: 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 30/156 (19%), Positives = 47/156 (30%), Gaps = 19/156 (12%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-----CTLTLSNNKLSGSIPSEIGNL 56
+P +L NL L LS N + + L L +L LS N ++ I
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKE 199
Query: 57 QELSHLDSRHIFIKGTIP----YPLGVLPLSYLDLSFN-------DLSGGIPKHLTTKLR 105
L L R+ F + L L + L L + L L
Sbjct: 200 IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGL-CNLT 258
Query: 106 RKVTRLISIVLSINAFL-TFLILGILFFLRCKKNKI 140
+ RL + ++ + F L + I
Sbjct: 259 IEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTI 294
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 28/127 (22%), Positives = 41/127 (32%), Gaps = 12/127 (9%)
Query: 8 SLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLS--GSIPSEIGNLQELSHLDS 64
L++L L + N + L L L LS N LS G L +LD
Sbjct: 323 KLKSLKRLTFTSNKGGNAFSEVDLPSLE--FLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLT 123
+ T+ L L +LD ++L + L LI + +S
Sbjct: 381 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL----RNLIYLDISHT-HTR 434
Query: 124 FLILGIL 130
GI
Sbjct: 435 VAFNGIF 441
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 16/154 (10%)
Query: 3 PLEIGSLRNL----VSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSE-IGNLQ 57
++ L + +SL LS N + P + + LTL NN S ++ I L
Sbjct: 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLA 225
Query: 58 ELSHLDSRHIFIKGT---------IPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR-K 107
L + L L + L++ D L L
Sbjct: 226 GLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVS 285
Query: 108 VTRLISIVLS-INAFLTFLILGILFFLRCKKNKI 140
L+S+ + + F L + CK +
Sbjct: 286 SFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQF 319
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 9/120 (7%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
I +L+NL L L NN++ P SSL +L L NNK+S S + NL ++ L
Sbjct: 304 PISNLKNLTYLTLYFNNISDISPVSSLTKLQ--RLFFYNNKVSD--VSSLANLTNINWLS 359
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT-TKLRRKVTRLISIVLSINAF 121
+ H I PL L ++ L L+ + + + V + +++
Sbjct: 360 AGHNQISDLT--PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATI 417
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ L NL + S N LT P +L +L + ++NN+++ P + NL L+ L
Sbjct: 63 GVEYLNNLTQINFSNNQLTDITPLKNLTKLV--DILMNNNQIADITP--LANLTNLTGLT 118
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR 106
+ I PL L L+ L+LS N +S T L++
Sbjct: 119 LFNNQITDID--PLKNLTNLNRLELSSNTISDISALSGLTSLQQ 160
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 6e-09
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ L L L L N ++ P + L LT L L+ N+L P I NL+ L++L
Sbjct: 260 PLSGLTKLTELKLGANQISNISPLAGLTALT--NLELNENQLEDISP--ISNLKNLTYLT 315
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG 94
I P+ L L L N +S
Sbjct: 316 LYFNNISDIS--PVSSLTKLQRLFFYNNKVSD 345
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 9e-09
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
T + +L L L +S N ++ S L +LT+ L +NN++S P +G L L
Sbjct: 168 TDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNL 223
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG 94
L +K I L L L+ LDL+ N +S
Sbjct: 224 DELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISN 257
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+L + L N+T ++ + L ++T+ L + + L L+ ++
Sbjct: 20 DTALAEKMKTVLGKTNVTDTVSQTDLDQVTT--LQADRLGI--KSIDGVEYLNNLTQINF 75
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP 97
+ + PL L L + ++ N ++ P
Sbjct: 76 SNNQLTDIT--PLKNLTKLVDILMNNNQIADITP 107
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
T + L + +L + + L + T + SNN+L+ P + NL +L
Sbjct: 37 TDTVSQTDLDQVTTLQADRLGIK--SIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKL 92
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP-KHLT 101
+ + I PL L L+ L L N ++ P K+LT
Sbjct: 93 VDILMNNNQIADIT--PLANLTNLTGLTLFNNQITDIDPLKNLT 134
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
+ + +L N+ L N ++ P ++L R+T L L++ + + + N+
Sbjct: 344 SDVSSLANLTNINWLSAGHNQISDLTPLANLTRIT--QLGLNDQAWTNAPVNYKANVSIP 401
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ + + + P + + D+++N S
Sbjct: 402 NTVKNVTGAL--IAPATISDGGSYTEPDITWNLPS 434
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 5e-09
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ L + L LS N L ++P +L L L S+N L ++ + NL L L
Sbjct: 458 HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELL 514
Query: 64 SRHIFIKG-TIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
+ ++ PL P L L+L N L ++ ++ ++ V SI
Sbjct: 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ------EEGIQERLAEMLPSVSSI 565
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 4e-06
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSG-SIPSEIGNLQE 58
+P + +LR L L S N L ++ + L L L NN+L + + +
Sbjct: 477 ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 534
Query: 59 LSHLD 63
L L+
Sbjct: 535 LVLLN 539
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 1 TIPLEI-GSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQE 58
I ++ L LY+S N L ++ + + L LS+N L +
Sbjct: 262 KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 319
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR 106
L +L H I T+ L L L LS ND + L + R
Sbjct: 320 LENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVAR 365
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 16/135 (11%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPS--SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELS 60
+ L L L NNLT + L + LS N+L I +Q L
Sbjct: 220 VRGPVNVELTILKLQHNNLT-DTAWLLNYPGLV--EVDLSYNELE-KIMYHPFVKMQRLE 275
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L + + + +P L LDLS N L + ++ + RL ++ L N
Sbjct: 276 RLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQP-----QFDRLENLYLDHN 328
Query: 120 AFLTFLILGILFFLR 134
+ + L L L+
Sbjct: 329 S-IVTLKLSTHHTLK 342
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 18/150 (12%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLT---GSIPSSLGRLTSCTLTLSNNKLSGSIPSEI-GNL 56
E +L N + + + ++ S ++ L L++ ++ I +
Sbjct: 36 YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE--LLNLNDLQIE-EIDTYAFAYA 92
Query: 57 QELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
+ L I+ P+ +P L+ L L NDLS +P+ + +L ++
Sbjct: 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNT----PKLTTLS 147
Query: 116 LSINAF-----LTFLILGILFFLRCKKNKI 140
+S N TF L L+ N++
Sbjct: 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRL 177
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+++ + +L +S N L+ ++ + L S+N ++ + + EL+ L
Sbjct: 180 VDLSLIPSLFHANVSYNLLS-TLA-IPIAVE--ELDASHNSIN-VVRGPV--NVELTILK 232
Query: 64 SRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF-- 121
+H + + L L +DLS+N+L I H K+ RL + +S N
Sbjct: 233 LQHNNLT-DTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKM----QRLERLYISNNRLVA 286
Query: 122 --LTFLILGILFFLRCKKNKI 140
L + L L N +
Sbjct: 287 LNLYGQPIPTLKVLDLSHNHL 307
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 4e-08
Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 22/155 (14%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPS-----SLGRLTSCTLTLSNNKLSGSIPSEI-G 54
T+ L L L +NL + SL L L +S+ + I
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLI--YLDISHTHTR-VAFNGIFN 147
Query: 55 NLQELSHLD-SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLI 112
L L L + + F + +P L L++LDLS L + L + L
Sbjct: 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSL----SSLQ 202
Query: 113 SIVLSIN-----AFLTFLILGILFFLRCKKNKIIT 142
+ +S N + L L L N I+T
Sbjct: 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 37/163 (22%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLS------------- 46
++P I + L L N L +LT T L+LS+N LS
Sbjct: 21 SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78
Query: 47 ------------GSIPSEIGNLQELSHLDSRHIFIKGTIPYP--LGVLP-LSYLDLSFND 91
++ S L++L HLD +H +K + L L YLD+S
Sbjct: 79 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTH 137
Query: 92 LSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFLILGILFFLR 134
+ L + L + ++ N+F + I LR
Sbjct: 138 TR-VAFNGIFNGL----SSLEVLKMAGNSFQENFLPDIFTELR 175
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 4e-08
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI----GNLQELSHL 62
LR L LY+S N+L IP +L +S L + +N++ +P + N+ + +
Sbjct: 100 PLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCI-EM 154
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLR 105
+ G P L L+YL +S L+ GIPK L L
Sbjct: 155 GGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDLPETLN 196
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 17/97 (17%)
Query: 9 LRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
L L L N + I S L L L L NNKLS +P+ + +L+ L +
Sbjct: 216 YSKLYRLGLGHNQIR-MIENGSLSFLPTLR--ELHLDNNKLS-RVPAGLPDLKLLQVVYL 271
Query: 65 RHIFIKGTIP--------YPLGVLPLSYLDLSFNDLS 93
I + + + + + L N +
Sbjct: 272 HTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 10/119 (8%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPS-SLGRLTSCT-LTLSNNKLSGSIPSEI-GNLQELSHLD 63
L L+L N + +I L R + L L +N++ I + L L L
Sbjct: 190 DLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELH 247
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLR--RKVTRLISIVLSIN 119
+ + +P L L L + L N+++ + + + K I L N
Sbjct: 248 LDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNN 304
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 21/155 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI----GN 55
+P EI + L L N+++ L L L NNK+S I +
Sbjct: 47 AVPKEISP--DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPLRK 103
Query: 56 LQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
LQ+L ++ H+ I P + L L + N + +PK + + L + I
Sbjct: 104 LQKL-YISKNHL---VEI--PPNLPSSLVELRIHDNRIR-KVPKGVFSGL----RNMNCI 152
Query: 115 VLSINAFLTFLILGILFFLRCKKNKIITKRNSIRR 149
+ N L F K N + +
Sbjct: 153 EMGGNP-LENSGFEPGAFDGLKLNYLRISEAKLTG 186
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Query: 11 NLVSLYLSGNNLTGSIPSSL-GRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLDSRHIF 68
L L +S LT IP L L L L +NK+ +I E +L L H
Sbjct: 173 KLNYLRISEAKLT-GIPKDLPETLN--ELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQ 228
Query: 69 IKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
I+ L LP L L L N LS +P L
Sbjct: 229 IRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 9e-08
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIG---NLQELSHL 62
+ + L S N LT ++ + G LT L L N+L + ++ L L
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQL 379
Query: 63 DSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSGGIPKHLTTKLRR 106
D + L L++S N L+ I + L +++
Sbjct: 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKV 425
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 8e-06
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 10/151 (6%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
+P ++ L +S N ++ S + L+ L +S+N++ S QEL
Sbjct: 15 VPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
+LD H + +P L +LDLSFN +P K +++L + LS
Sbjct: 73 YLDLSHNKLVKISCHPTV--NLKHLDLSFNAFD-ALPI---CKEFGNMSQLKFLGLSTT- 125
Query: 121 FLTFLILGILFFLRCKKNKIITKRNSIRRDN 151
L + + L K ++ +++
Sbjct: 126 HLEKSSVLPIAHLNISKVLLVLGETYGEKED 156
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 6e-05
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIP--SEIGNLQELSHLDSR 65
+ L L LS N L L L LS N ++P E GN+ +L L
Sbjct: 67 FNQELEYLDLSHNKLVKISCHPTVNLK--HLDLSFNAFD-ALPICKEFGNMSQLKFLGLS 123
Query: 66 HIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFL 125
++ + P+ L +S + L + K L+ T + IV N F+
Sbjct: 124 TTHLEKSSVLPIAHLNISKVLLVLGETY--GEKEDPEGLQDFNTESLHIVFPTNKEFHFI 181
Query: 126 I 126
+
Sbjct: 182 L 182
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 13/141 (9%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDSRH 66
N+ + + +++ L SNN L+ ++ G+L EL L +
Sbjct: 298 IFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357
Query: 67 IFIKGTIPYPLGVLP----LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFL 122
+K + + L LD+S N +S K + L+S+ +S N
Sbjct: 358 NQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWT----KSLLSLNMSSNILT 412
Query: 123 TFL---ILGILFFLRCKKNKI 140
+ + + L NKI
Sbjct: 413 DTIFRCLPPRIKVLDLHSNKI 433
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI-GNLQELSHLD 63
+ L L N + SIP + +L + L +++N+L S+P I L L +
Sbjct: 420 PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIW 474
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 20/142 (14%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
I L L L + NN+T S LT L +NKL+ ++ + L +L++L+
Sbjct: 59 GIEKLTGLTKLICTSNNITTLDLSQNTNLT--YLACDSNKLT-NLD--VTPLTKLTYLNC 113
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLT 123
+ + P L+YL+ + N L+ + T+L + +N +T
Sbjct: 114 DTNKLT---KLDVSQNPLLTYLNCARNTLT-----EIDVS---HNTQLTELDCHLNKKIT 162
Query: 124 FLILG---ILFFLRCKKNKIIT 142
L + L L C NKI
Sbjct: 163 KLDVTPQTQLTTLDCSFNKITE 184
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
L++ L L L N LT S LT L + N L+ I + + +L+ LD
Sbjct: 100 LDVTPLTKLTYLNCDTNKLTKLDVSQNPLLT--YLNCARNTLT-EID--VSHNTQLTELD 154
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT--TKLRRKVTRLISIVLSINA 120
+ L+ LD SFN ++ +L + + L+ N
Sbjct: 155 CHLNKK--ITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQNI 212
Query: 121 FLTFLILG 128
LTFL
Sbjct: 213 QLTFLDCS 220
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 31/158 (19%), Positives = 52/158 (32%), Gaps = 27/158 (17%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
L++ L +L S N +T S L L N ++ + + +L+
Sbjct: 161 ITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLN--RLNCDTNNIT-KLD--LNQNIQLT 215
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR------------- 106
LD + I + L L+Y D S N L+ + +KL
Sbjct: 216 FLDCSSNKLT-EI--DVTPLTQLTYFDCSVNPLT-ELDVSTLSKLTTLHCIQTDLLEIDL 271
Query: 107 -KVTRLISIVLSINAFLTFLILG---ILFFLRCKKNKI 140
T+LI + L + L+ L C+ I
Sbjct: 272 THNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGI 309
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 8/91 (8%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+++ L L S N LT S+L +LT TL L I + + +L +
Sbjct: 227 IDVTPLTQLTYFDCSVNPLTELDVSTLSKLT--TLHCIQTDLL-EID--LTHNTQLIYFQ 281
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ + + L LD ++
Sbjct: 282 AEG--CRKIKELDVTHNTQLYLLDCQAAGIT 310
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 3 PLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
L++ L L +T + S +L L L+N +L+ + + + +L
Sbjct: 290 ELDVTHNTQLYLLDCQAAGIT-ELDLSQNPKLV--YLYLNNTELT-ELD--VSHNTKLKS 343
Query: 62 LDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L + I+ +G +P L+ +
Sbjct: 344 LSCVNAHIQ-DFS-SVGKIPALNNNFEAEGQTI 374
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHL 62
L++ LV LYL+ LT + S +L +L+ N + +G + L++
Sbjct: 312 LDLSQNPKLVYLYLNNTELT-ELDVSHNTKLK--SLSCVNAHIQ-DFS-SVGKIPALNNN 366
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLS 93
T+P + +S + L
Sbjct: 367 FEAEGQTI-TMPKETLTNNSLTIAVSPDLLD 396
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 7/164 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEIGNL 56
+ +L NL +L + I + L L L + L + ++
Sbjct: 114 GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLN--ELEIKALSLRNYQSQSLKSI 171
Query: 57 QELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIV 115
+++ HL + +L + YL+L +L+ L + ++
Sbjct: 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFR 231
Query: 116 LSINAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNFD 159
S+ +F L L + +++ ++ +F+ D
Sbjct: 232 GSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESD 275
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 16/123 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS-LGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
+P + L LS + + + L L +SNN L S + LQEL
Sbjct: 401 PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLE--VLDVSNNNLD-SFSLFLPRLQEL 456
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
++ + T+P + P L + +S N L +P + +L T L I L
Sbjct: 457 -YISRNKL---KTLP-DASLFPVLLVMKISRNQLK-SVPDGIFDRL----TSLQKIWLHT 506
Query: 119 NAF 121
N +
Sbjct: 507 NPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 4e-07
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQE 58
+IP + + SL LS N +T L + L L +++++ +I + +L
Sbjct: 19 SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEGDAFYSLGS 75
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L HLD + G L L YL+L N L L T L ++ +
Sbjct: 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNL----TNLQTLRIG 131
Query: 118 INAFLTFL 125
+ +
Sbjct: 132 NVETFSEI 139
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 9e-07
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 3 PLEIGSLRNLVSLYLSGNNLT--GSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
G+ +L +L LS N+L L L + T L +S N +P +++
Sbjct: 354 SACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM 412
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLT 101
L+ I+ + + L LD+S N+L L
Sbjct: 413 RFLNLSSTGIR-VV--KTCIPQTLEVLDVSNNNLD-SFSLFLP 451
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 9/126 (7%)
Query: 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSE-IGNLQELS 60
++ + NL L L + + + L S L LS+N LS S+ S G L L
Sbjct: 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLK 101
Query: 61 HLDSRHIFIKG-TIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
+L+ + + L L L + + I + L T L + +
Sbjct: 102 YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL----TSLNELEIKA 157
Query: 119 NAFLTF 124
+ +
Sbjct: 158 LSLRNY 163
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSG-SIPSEIGNLQELSHLDSR 65
SL +L L LS N+L+ S G L+S L L N + S NL L L
Sbjct: 72 SLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIG 131
Query: 66 HIFIKGTIPYP--LGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLT 123
++ I G+ L+ L++ L + + + L ++
Sbjct: 132 NVETFSEIRRIDFAGLTSLNELEIKALSLR-NYQSQSLKSI----RDIHHLTLHLS-ESA 185
Query: 124 FLILGILFFLR 134
FL+ L
Sbjct: 186 FLLEIFADILS 196
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 7/106 (6%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIG---NLQELSHL 62
S + L + N T S+ L L L N L + N+ L L
Sbjct: 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETL 408
Query: 63 DSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSGGIPKHLTTKLRR 106
D + + L+LS N L+G + + L K++
Sbjct: 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKV 454
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 5e-06
Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSS-LGRLTSCTLTLSNNKLSGSIP--SEIGNLQELSHLDS 64
++L L +S N L +I + L L LS N +P E GNL +L+ L
Sbjct: 98 FNQDLEYLDVSHNRLQ-NISCCPMASLRH--LDLSFNDFD-VLPVCKEFGNLTKLTFLGL 153
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTF 124
+ P+ L LS + L I T L+ T ++ +V N+ +
Sbjct: 154 SAAKFRQLDLLPVAHLHLSCILLDLVSYH--IKGGETESLQIPNTTVLHLVFHPNSLFSV 211
Query: 125 LILGILFFLRCKKNKII 141
+ + L + I
Sbjct: 212 QVNMSVNALGHLQLSNI 228
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 9/161 (5%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIP-----SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQE 58
+ + +L L LS N+ +P +L +LT L LS K + +L
Sbjct: 115 ISCCPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLT--FLGLSAAKFRQLDLLPVAHLHL 171
Query: 59 -LSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
LD IKG L + + L L F+ S + + +L +I L+
Sbjct: 172 SCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLN 231
Query: 118 INAFLTFLILGILFFLRCKKNKIITKRNSIRRDNEFSVWNF 158
+ + + ++ F
Sbjct: 232 DENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQF 272
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 7e-04
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI-GNLQELSHLDSRHIF 68
+L LS N+++ + L+ L LS+N++ S+ + Q+L +LD H
Sbjct: 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNR 111
Query: 69 IKGTIPYPLGVLP-LSYLDLSFNDLS 93
++ + L +LDLSFND
Sbjct: 112 LQNI---SCCPMASLRHLDLSFNDFD 134
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 2e-07
Identities = 29/143 (20%), Positives = 44/143 (30%), Gaps = 11/143 (7%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS---CTLTLSNNKLSGSIPSEIGNLQELS 60
L + + L L L +TG+ P L T L L N + + + LQ+
Sbjct: 89 LRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT-RDAWLAELQQWL 147
Query: 61 HLDSRHIFIKG----TIPYPL-GVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
+ + I V P LS LDLS N G ++ K L +
Sbjct: 148 KPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG-LISALCPLKFPTLQVL 206
Query: 115 VLSINAFLTFLILGILFFLRCKK 137
L T + +
Sbjct: 207 ALRNAGMETPSGVCSALAAARVQ 229
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 8/97 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC--TLTLSNNKLSGSIPSEIG-NLQ 57
+ L L LS N+L + + S +L LS L +P + L
Sbjct: 219 VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSG 94
L L + P P + + L L N
Sbjct: 278 VL-DLSYNRL---DRNPSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 2e-05
Identities = 23/133 (17%), Positives = 38/133 (28%), Gaps = 18/133 (13%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC------TLTLSNNKLSGSIPSEIGN 55
PL + +L L L + + L L L+++ ++
Sbjct: 113 PPLLEATGPDLNILNLRNVSWAT-RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171
Query: 56 LQELSHLDSRHIFIKGTIPYPLGVLP-----LSYLDLSFNDLS--GGIPKHLTTKLRRKV 108
LS LD G + P L L L + G+ L
Sbjct: 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAAR---- 227
Query: 109 TRLISIVLSINAF 121
+L + LS N+
Sbjct: 228 VQLQGLDLSHNSL 240
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 3e-05
Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 7 GSLRNLVSLYLSGNNLT---GSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI-GNLQELSH 61
L L L + G + L LS+N L + + +L+
Sbjct: 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNS 257
Query: 62 LDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLT-TKLRR 106
L+ +K +P L LS LDLS+N L P ++
Sbjct: 258 LNLSFTGLK-QVPKGLPAK-LSVLDLSYNRLD-RNPSPDELPQVGN 300
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 37/141 (26%), Positives = 46/141 (32%), Gaps = 12/141 (8%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQELSHLDSRH 66
L L LS N + SS L L L + +I E NL L LD
Sbjct: 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82
Query: 67 IFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLT-- 123
I P L L L L F LS + L R + L + LS N +
Sbjct: 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAV---LKDGYFRNLKALTRLDLSKNQIRSLY 139
Query: 124 ----FLILGILFFLRCKKNKI 140
F L L + N+I
Sbjct: 140 LHPSFGKLNSLKSIDFSSNQI 160
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 7e-06
Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 13/141 (9%)
Query: 6 IGSLRNLVSLYLSGNNLTG-SIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELS--- 60
+L+ L L LS N + + S G+L S ++ S+N++ E+ LQ +
Sbjct: 119 FRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178
Query: 61 -HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
L + ++ + ++ + + P + L D+SG +T S +S +
Sbjct: 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSG-------NGWTVDITGNFSNAISKS 231
Query: 120 AFLTFLILGILFFLRCKKNKI 140
+ ++ + + I
Sbjct: 232 QAFSLILAHHIMGAGFGFHNI 252
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 10/138 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLT---LSNNKLSGSIPSEIGNLQ 57
+ + +++ +N+ ++ L ++ LS+ + L+
Sbjct: 231 SQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK 290
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
+L L+ + I L L L+LS+N L + L ++ I L
Sbjct: 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG-ELYSSNFYGL----PKVAYIDL 345
Query: 117 SINAFLTFLILGILFFLR 134
N + + FL
Sbjct: 346 QKNH-IAIIQDQTFKFLE 362
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 20/154 (12%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPSS--------LGRLTSCTLTLSNNKLSGSIPSEIGNLQE 58
+L L+L N L + + L L L L++N L+ P +L
Sbjct: 448 SENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ--VLYLNHNYLNSLPPGVFSHLTA 505
Query: 59 LSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L L + + + L LD+S N L P L + ++
Sbjct: 506 LRGLSLNSNRLT-VLSHNDLPANLEILDISRNQLLAPNPDVF--------VSLSVLDITH 556
Query: 119 NAFLTFLILGILF-FLRCKKNKIITKRNSIRRDN 151
N F+ L +L I I
Sbjct: 557 NKFICECELSTFINWLNHTNVTIAGPPADIYCVY 590
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSG-SIPSEIGNLQELSHLD 63
I + ++ ++LSGN L ++P LT+ + LS N+L I + + L L
Sbjct: 376 TIHFIPSIPDIFLSGNKLV-TLPK--INLTANLIHLSENRLENLDILYFLLRVPHLQILI 432
Query: 64 -SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
+++ F + P L L L N L L + ++ L + L+ N
Sbjct: 433 LNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492
Query: 122 -----LTFLILGILFFLRCKKNKIIT 142
F L L L N++
Sbjct: 493 NSLPPGVFSHLTALRGLSLNSNRLTV 518
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 8/141 (5%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSI--PSEIGNLQELSHLDS 64
+L NL L L + + P + L L L LS ++ NL+ L+ LD
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 65 RHIFIKGTIPYP-LGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFL 122
I+ +P G L L +D S N + + +H L+ K L L+ N+
Sbjct: 131 SKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF-LVCEHELEPLQGK--TLSFFSLAANSLY 187
Query: 123 TFLILGILFFLRCKKNKIITK 143
+ + + + +N ++
Sbjct: 188 SRVSVDWGKCMNPFRNMVLEI 208
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDSRH 66
L NL L LS N L S+ L + L N ++ L++L LD R
Sbjct: 312 GLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRD 371
Query: 67 IFIKGTIPYPLGVLPLSYLDLSFNDLS 93
+ TI + + + LS N L
Sbjct: 372 NALT-TIH---FIPSIPDIFLSGNKLV 394
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
+ + LV + LS N L I + RL L +SNN+L ++ + L
Sbjct: 250 LLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLE--RLYISNNRLV-ALNLYGQPIPTLKV 305
Query: 62 LDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
LD H + + L L L N +
Sbjct: 306 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 337
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 18/147 (12%)
Query: 4 LEIGSLRNLVSLYLSGNNLT---GSIPSSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQEL 59
E +L N + + + ++ S ++ L L++ ++ I + +
Sbjct: 45 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE--LLNLNDLQIE-EIDTYAFAYAHTI 101
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
L I+ P+ +P L+ L L NDLS +P+ + +L ++ +S
Sbjct: 102 QKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNT----PKLTTLSMSN 156
Query: 119 NAF-----LTFLILGILFFLRCKKNKI 140
N TF L L+ N++
Sbjct: 157 NNLERIEDDTFQATTSLQNLQLSSNRL 183
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 3e-06
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQEL 59
+ L + L L LS N+L + + + L L +N + ++ + L
Sbjct: 292 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTL 347
Query: 60 SHLD 63
+L
Sbjct: 348 KNLT 351
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 4e-05
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHI 67
+ +L +L LS N LT S + L +S N L S + + LD+ H
Sbjct: 169 ATTSLQNLQLSSNRLTHVDLSLIPSLF--HANVSYNLL-----STLAIPIAVEELDASHN 221
Query: 68 FIKGTIPYPLGVLP-LSYLDLSFNDLS 93
I + V L+ L L N+L+
Sbjct: 222 SIN-VV--RGPVNVELTILKLQHNNLT 245
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
S L L LS + +I SL L+ TL L+ N + S+ L L L
Sbjct: 50 SFPELQVLDLSRCEIQ-TIEDGAYQSLSHLS--TLILTGNPIQ-SLALGAFSGLSSLQKL 105
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ + +P+G L L L+++ N +
Sbjct: 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQ 137
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 19/123 (15%)
Query: 7 GSLRNLVSLYLSGNNLTGSIP-----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELS 60
G L+ L L ++ N + S S+L L L LS+NK+ SI L ++
Sbjct: 121 GHLKTLKELNVAHNLIQ-SFKLPEYFSNLTNLE--HLDLSSNKIQ-SIYCTDLRVLHQMP 176
Query: 61 HLDSRHIFIKGTIPY-PLGV---LPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
L+ + + G + L L L N L +P + +L T L I L
Sbjct: 177 LLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRL----TSLQKIWL 231
Query: 117 SIN 119
N
Sbjct: 232 HTN 234
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 4e-07
Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 8/97 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTLSNNKLSGSIPSEI-GN 55
+ NL LY+ + LG L LT+ + L + +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELR--NLTIVKSGLR-FVAPDAFHF 78
Query: 56 LQELSHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDL 92
LS L+ ++ + L L L LS N L
Sbjct: 79 TPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 17/64 (26%)
Query: 282 VADFGMT--MHLYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILM 324
+ DFG+ + S L+G+ + + DVY+FG+V E++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 325 GRQP 328
G+ P
Sbjct: 221 GQLP 224
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 6e-07
Identities = 36/235 (15%), Positives = 67/235 (28%), Gaps = 87/235 (37%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDI-LYPK 228
++ + G G YG+VY L V A+K A+ ++F NE +I P
Sbjct: 11 DLDNLKLLELIGRGRYGAVYKGSLDERPV-AVKVFS------FANRQNFINEKNIYRVPL 63
Query: 229 YDIETLLSFMDFVCIKDACFWFMNTW-------RGEACSVFCTMIMKPLSWI-------- 273
+ + + F+ + M G S+ + + W+
Sbjct: 64 MEHDNIARFIV-GDERVTADGRMEYLLVMEYYPNG---SLXKYLSLHTSDWVSSCRLAHS 119
Query: 274 ---GL------------------------------RELEAFVADFGMTM--------HLY 292
GL + ++DFG++M
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 293 CDSSNLTLLAGTYGY-------------------EKCDVYSFGVVALEILMGRQP 328
+ + GT Y ++ D+Y+ G++ EI M
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 15/59 (25%)
Query: 282 VADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328
+ DFG + +++T G+ + EKCDV+S+G++ E++ R+P
Sbjct: 147 ICDFGTACDI---QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Query: 282 VADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328
V DFG++ + AGT + EK DVYSFGV+ E+ +QP
Sbjct: 180 VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 9e-07
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDSRHI 67
L NL L LS N+++ SL L L+NNKL +P + + + + + +
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Query: 68 FIK-------GTIPYPLGVLPLSYLDLSFNDLS 93
I Y S + L N +
Sbjct: 274 NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIP----SEIGNLQELSHL 62
L L LYLS N L +P + + L + N+++ + + + + + L
Sbjct: 98 PLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVV-EL 152
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRR 106
+ + G + LSY+ ++ +++ IP+ L L
Sbjct: 153 GTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTE 196
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 20/119 (16%)
Query: 9 LRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
L+NL +L L N ++ I + L +L L LS N+L +P ++ LQEL +
Sbjct: 75 LKNLHTLILINNKIS-KISPGAFAPLVKLE--RLYLSKNQLK-ELPEKMPKTLQEL-RVH 129
Query: 64 SRHIFIKGTIP-YPLGVLP-LSYLDLSFNDL-SGGIPKHLTTKLRRKVTRLISIVLSIN 119
I + L + ++L N L S GI + +L I ++
Sbjct: 130 ENEIT---KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM----KKLSYIRIADT 181
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQE 58
+P ++ + L L N +T L + TL L NNK+S I L +
Sbjct: 45 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-KISPGAFAPLVK 101
Query: 59 LSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L L +K + P + L L + N+++ + K + L ++I + L
Sbjct: 102 LERLYLSKNQLK-EL--PEKMPKTLQELRVHENEIT-KVRKSVFNGL----NQMIVVELG 153
Query: 118 INAFLTFLI-------LGILFFLRCKKNKI 140
N + I + L ++R I
Sbjct: 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNI 183
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 30/129 (23%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKL-SGSIPSEI----G 54
L + L L + N +T + + L ++ + L N L S I +
Sbjct: 115 LPEKMPKTLQELRVHENEIT-KVRKSVFNGLNQMI--VVELGTNPLKSSGIENGAFQGMK 171
Query: 55 NLQELSHLDS---RHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTR 110
L + + I P G+ P L+ L L N ++ + L
Sbjct: 172 KLSYI-RIADTNITTI--------PQGLPPSLTELHLDGNKIT-KVDAASLKGL----NN 217
Query: 111 LISIVLSIN 119
L + LS N
Sbjct: 218 LAKLGLSFN 226
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 40/144 (27%), Positives = 53/144 (36%), Gaps = 20/144 (13%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
L NL SL + N+L I S L L LTL L+ SIP+E +L L L
Sbjct: 126 DLYNLKSLEVGDNDLV-YISHRAFSGLNSLE--QLTLEKCNLT-SIPTEALSHLHGLIVL 181
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
RH+ I Y L L L++S + + L L S+ ++
Sbjct: 182 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-----NLTSLSITHCNL 236
Query: 122 -----LTFLILGILFFLRCKKNKI 140
L L L FL N I
Sbjct: 237 TAVPYLAVRHLVYLRFLNLSYNPI 260
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 28/148 (18%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
L NL L +S N + + L L +L + +N L I +L++L
Sbjct: 102 GLSNLTKLDISENKIV-ILLDYMFQDLYNLK--SLEVGDNDLV-YISHRAFSGLNSLEQL 157
Query: 60 SHLDSRHIFIKGTIP-YPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L+ ++ +IP L L L L L +++ I + +L RL + +S
Sbjct: 158 -TLEKCNL---TSIPTEALSHLHGLIVLRLRHLNIN-AIRDYSFKRL----YRLKVLEIS 208
Query: 118 INAFLT-----FLILGILFFLRCKKNKI 140
+L L L L +
Sbjct: 209 HWPYLDTMTPNCLYGLNLTSLSITHCNL 236
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 15/127 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GN 55
T+ NL SL ++ NLT ++P L L L LS N +S +I +
Sbjct: 215 TMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLR--FLNLSYNPIS-TIEGSMLHE 270
Query: 56 LQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
L L + + PY L L L++S N L+ + + + + L ++
Sbjct: 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSV----GNLETL 325
Query: 115 VLSINAF 121
+L N
Sbjct: 326 ILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI-GNLQE 58
+P I L L N + L L+ N +S ++ NL
Sbjct: 25 AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFN 81
Query: 59 LSHLDSRHIFIKGTIPYPL--GVLPLSYLDLSFNDLS 93
L L R +K IP + G+ L+ LD+S N +
Sbjct: 82 LRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV 117
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 14/115 (12%)
Query: 9 LRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
+ NL L LS N+L ++ L L L L NN + + ++ +L L
Sbjct: 87 VPNLRYLDLSSNHLH-TLDEFLFSDLQALE--VLLLYNNHIV-VVDRNAFEDMAQLQKLY 142
Query: 64 SRH----IFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
F I + L LDLS N L +P KL V + +
Sbjct: 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYL 196
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 5e-05
Identities = 30/146 (20%), Positives = 45/146 (30%), Gaps = 43/146 (29%)
Query: 9 LRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
L NL SL LS N+L I + L L LS+N L ++ + +L
Sbjct: 63 LTNLHSLLLSHNHLN-FISSEAFVPVPNLR--YLDLSSNHLH-TLDEFL--FSDLQA--- 113
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN----- 119
L L L N + + ++ + +L + LS N
Sbjct: 114 -----------------LEVLLLYNNHIV-VVDRNAFEDM----AQLQKLYLSQNQISRF 151
Query: 120 ---AFLTFLILGILFFLRCKKNKIIT 142
L L L NK+
Sbjct: 152 PVELIKDGNKLPKLMLLDLSSNKLKK 177
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 9e-05
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 13/93 (13%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
L+ L L L N++ + + +L L LS N++S P E+ L +L
Sbjct: 110 DLQALEVLLLYNNHIV-VVDRNAFEDMAQLQ--KLYLSQNQIS-RFPVELIKDGNKLPKL 165
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFND 91
LD +K L LP L ++
Sbjct: 166 MLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 17/61 (27%)
Query: 282 VADFGMTMHLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQ 327
VADFG++ +++ L G + + EK D YSF ++ IL G
Sbjct: 170 VADFGLSQQ---SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 328 P 328
P
Sbjct: 227 P 227
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
Query: 9 LRNLVSLYLSGNNLTGSIP--SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLDSR 65
L NL L L+ NL IP + L +L L LS N LS +I L L L
Sbjct: 184 LSNLRYLNLAMCNLR-EIPNLTPLIKLD--ELDLSGNHLS-AIRPGSFQGLMHLQKLWMI 239
Query: 66 HIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
I+ L L ++L+ N+L+ +P L T L L I L N +
Sbjct: 240 QSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPL----HHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 6e-06
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 9 LRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
L NL +L L N LT +IP+ L +L L L NN + SIPS + L LD
Sbjct: 111 LANLNTLELFDNRLT-TIPNGAFVYLSKLKE--LWLRNNPIE-SIPSYAFNRIPSLRRLD 166
Query: 64 -SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ L L YL+L+ +L
Sbjct: 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 22/120 (18%)
Query: 9 LRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTLS-NNKLSGSIPSEI----GNLQEL 59
L L L+L N + SIPS + L L L +LS I NL+ L
Sbjct: 135 LSKLKELWLRNNPIE-SIPSYAFNRIPSLRR--LDLGELKRLS-YISEGAFEGLSNLRYL 190
Query: 60 SHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+L ++ IP ++ L LDLS N LS I L L + + +
Sbjct: 191 -NLAMCNL---REIPNLTPLIKLDELDLSGNHLS-AIRPGSFQGL----MHLQKLWMIQS 241
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 4e-05
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 25/146 (17%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
LR+L L LS N++ +I + L L TL L +N+L+ +IP+ L+EL
Sbjct: 86 HLRHLEILQLSRNHIR-TIEIGAFNGLANLN--TLELFDNRLT-TIPNGAFVYLSKLKEL 141
Query: 60 SHLDSRHI-FIKGTIPYPLGVLPLSYLDLS-FNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L + I I + L LDL LS I + L + L + L+
Sbjct: 142 -WLRNNPIESIPSYAFNRIPS--LRRLDLGELKRLS-YISEGAFEGL----SNLRYLNLA 193
Query: 118 INAFL---TFLILGILFFLRCKKNKI 140
+ L L L N +
Sbjct: 194 MCNLREIPNLTPLIKLDELDLSGNHL 219
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 36/147 (24%), Positives = 49/147 (33%), Gaps = 29/147 (19%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSE----IGN 55
+P I N L L N + +S L L LS N + +I + N
Sbjct: 57 EVPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLAN 113
Query: 56 LQELSHLDSRHIFIKGTIPYPL--GVLPLSYLDLSFNDLS---GGIPKHLTTKLRR---- 106
L L L + TIP + L L L N + + LRR
Sbjct: 114 LNTL-ELFDNRL---TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRI-PSLRRLDLG 168
Query: 107 KVTRLISIVLSINAF-----LTFLILG 128
++ RL I S AF L +L L
Sbjct: 169 ELKRLSYI--SEGAFEGLSNLRYLNLA 193
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 31/128 (24%), Positives = 47/128 (36%), Gaps = 16/128 (12%)
Query: 9 LRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
L L +L+L L + L L L L +N L ++P + +L L+HL
Sbjct: 104 LGRLHTLHLDRCGLQ-ELGPGLFRGLAALQ--YLYLQDNALQ-ALPDDTFRDLGNLTHLF 159
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFL 122
I L L L L N ++ + H L RL+++ L N L
Sbjct: 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDL----GRLMTLYLFANN-L 213
Query: 123 TFLILGIL 130
+ L L
Sbjct: 214 SALPTEAL 221
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 22/122 (18%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
+ RNL L+L N L I + L L L LS+N S+ G L L
Sbjct: 54 ACRNLTILWLHSNVLA-RIDAAAFTGLALLE--QLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 60 SHLDSRHIFIKGTIPYPL--GVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
HLD + + L G+ L YL L N L +P L L + L
Sbjct: 111 -HLDRCGLQ---ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDL----GNLTHLFLH 161
Query: 118 IN 119
N
Sbjct: 162 GN 163
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
L +L L L N + + LGRL TL L N LS ++P+E L+ L +L
Sbjct: 175 GLHSLDRLLLHQNRVA-HVHPHAFRDLGRLM--TLYLFANNLS-ALPTEALAPLRALQYL 230
Query: 63 D 63
Sbjct: 231 R 231
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI-GNLQE 58
+P+ I ++L GN ++ +S + T L L +N L+ I + L
Sbjct: 25 AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLAL 81
Query: 59 LSHLD-SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS---GGIPKHLTTKLRR 106
L LD S + ++ P L L L L L G+ + L L+
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL-AALQY 133
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 22/146 (15%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
NL +L L+ N + +I SSLG L L LS N LS ++ S +L L
Sbjct: 74 RCVNLQALVLTSNGIN-TIEEDSFSSLGSLE--HLDLSYNYLS-NLSSSWFKPLSSLTFL 129
Query: 60 SHLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+L G + L L + D I + L T L + + +
Sbjct: 130 -NLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL----TFLEELEIDAS 184
Query: 120 AF-----LTFLILGILFFLRCKKNKI 140
+ + + L +
Sbjct: 185 DLQSYEPKSLKSIQNVSHLILHMKQH 210
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 28/153 (18%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLS----GSIPSEIGNLQEL 59
SL +L L LS N L+ ++ S L LT L L N S+ S + LQ L
Sbjct: 98 SLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTF--LNLLGNPYKTLGETSLFSHLTKLQIL 154
Query: 60 SHLDSRHIFIKGTIPYPLGVLP----LSYLDLSFNDLS---GGIPKHLT--TKLR---RK 107
+ I L L++ +DL K + + L ++
Sbjct: 155 RVGNMDTF---TKI--QRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209
Query: 108 VTRLISIVLSINAFLTFLILGILFFLRCKKNKI 140
L+ I + + + + L L +++
Sbjct: 210 HILLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 19/129 (14%)
Query: 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI-GNLQELSHLDSR 65
L L L + ++L P SL + + L L + + + L+ R
Sbjct: 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELR 230
Query: 66 HIFI---------KGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVL 116
+ G + + ++ L + L +++ L+ +
Sbjct: 231 DTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMK------LLNQISGLLELEF 284
Query: 117 SINAFLTFL 125
S N L +
Sbjct: 285 SRNQ-LKSV 292
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEI----GNLQELSHLDSR 65
+ SL LS N +T S L R + L L++N ++ +I + G+L+ L L
Sbjct: 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHL-DLSYN 110
Query: 66 HIFIKGTIPYPLGV---LP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAF 121
++ + L L++L+L N L + L T+L + +
Sbjct: 111 YL---SNLSS--SWFKPLSSLTFLNLLGNPYKTLGETSLFSHL----TKLQILRVGNMDT 161
Query: 122 LTFLILGILFFLR 134
T + L
Sbjct: 162 FTKIQRKDFAGLT 174
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 28/155 (18%)
Query: 8 SLRNLVSLYLSGNNLT----GSIPSSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
L +L L L GN S+ S L +L L + N I + L+EL
Sbjct: 122 PLSSLTFLNLLGNPYKTLGETSLFSHLTKL--QILRVGNMDTFTKIQRKDFAGLTFLEEL 179
Query: 60 SHLDSRHIFIKGTIPYPLGVL----PLSYLDLSFNDLS---GGIPKHLT--TKLRRKVTR 110
+D+ + Y L +S+L L + L + T
Sbjct: 180 -EIDASDL-----QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTD 233
Query: 111 LISI---VLSINAFLTFLILGILFFLRCKKNKIIT 142
L + LS + + ++ +
Sbjct: 234 LDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ 268
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 8e-06
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 14/59 (23%)
Query: 282 VADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQP 328
+ DFG+ + + AG Y + + DV+S+GV+ E+L G P
Sbjct: 157 ITDFGLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 9 LRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
L +L +L L N LT IPS L +L L L NN + SIPS + L LD
Sbjct: 122 LASLNTLELFDNWLT-VIPSGAFEYLSKLRE--LWLRNNPIE-SIPSYAFNRVPSLMRLD 177
Query: 64 -SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
++ L L YL+L ++
Sbjct: 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 38/147 (25%), Positives = 51/147 (34%), Gaps = 27/147 (18%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
L +L L L N++ I + L L TL L +N L+ IPS L+EL
Sbjct: 97 HLHHLEVLQLGRNSIR-QIEVGAFNGLASLN--TLELFDNWLT-VIPSGAFEYLSKLREL 152
Query: 60 SHLDSRHIFIKGTIP-YPLGVLP-LSYLDLS-FNDLSGGIPKHLTTKLRRKVTRLISIVL 116
L + I +IP Y +P L LDL L I + L L + L
Sbjct: 153 -WLRNNPI---ESIPSYAFNRVPSLMRLDLGELKKLE-YISEGAFEGL----FNLKYLNL 203
Query: 117 SINAFL---TFLILGILFFLRCKKNKI 140
+ L L L N
Sbjct: 204 GMCNIKDMPNLTPLVGLEELEMSGNHF 230
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 16/117 (13%)
Query: 9 LRNLVSLYLSGNNLTGSIPSS----LGRLTSCTLTLSN-NKLSGSIPSEI-GNLQELSHL 62
L L L+L N + SIPS + L L L KL I L L +L
Sbjct: 146 LSKLRELWLRNNPIE-SIPSYAFNRVPSLMR--LDLGELKKLE-YISEGAFEGLFNLKYL 201
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+ IK +P ++ L L++S N I L + L + + +
Sbjct: 202 NLGMCNIK-DMPNLTPLVGLEELEMSGNHFP-EIRPGSFHGL----SSLKKLWVMNS 252
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 26/131 (19%), Positives = 41/131 (31%), Gaps = 17/131 (12%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSE----IGN 55
+P I N L L NN+ + L L L N + I + +
Sbjct: 68 EVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLAS 124
Query: 56 LQELSHLDSRHI-FIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
L L L + I L L L L N + IP + ++ L+ +
Sbjct: 125 LNTL-ELFDNWLTVIPSGAFEYLSK--LRELWLRNNPIE-SIPSYAFNRV----PSLMRL 176
Query: 115 VLSINAFLTFL 125
L L ++
Sbjct: 177 DLGELKKLEYI 187
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 7e-04
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 9/61 (14%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSE-IGNLQELSHL 62
L L L +SGN+ I L L L + N+++S I L L L
Sbjct: 216 PLVGLEELEMSGNHFP-EIRPGSFHGLSSLK--KLWVMNSQVS-LIERNAFDGLASLVEL 271
Query: 63 D 63
+
Sbjct: 272 N 272
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 1e-05
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIP----SE 52
IP ++ RN + L L I S G L + +S N + I S
Sbjct: 23 EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLE--KIEISQNDVLEVIEADVFSN 77
Query: 53 IGNLQELSHLDSRHI-FIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRL 111
+ L E+ + ++ +I L L YL +S + +P +
Sbjct: 78 LPKLHEIRIEKANNLLYINPEAFQNLPN--LQYLLISNTGIK-HLPDVHKIHS----LQK 130
Query: 112 ISIVLSINAFLTFLILGILFFLRCKKNKIITKRNSIRR 149
+ + + N + + L + + +N I+
Sbjct: 131 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 21/121 (17%), Positives = 34/121 (28%), Gaps = 17/121 (14%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
L++L L + I L L L L N+ + + L L L
Sbjct: 52 RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI--ILKLDYNQFL-QLETGAFNGLANLEVL 108
Query: 63 DSRHIFIKGTIPYPLGVLP----LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSI 118
+ G + L L L N++ P + R + L+
Sbjct: 109 TLTQCNLDGAVL-SGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM----RRFHVLDLTF 163
Query: 119 N 119
N
Sbjct: 164 N 164
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 28/147 (19%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEI----GNLQELSHLDSR 65
++ + LS N++ +S RL L + I + +L L LD
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL-KLDYN 89
Query: 66 HIFIKGTIPYPLGVLP----LSYLDLSFNDL-SGGIPKHLTTKLRRKVTRLISIVLSINA 120
+ G L L L+ +L + + L T L +VL N
Sbjct: 90 QF---LQLET--GAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL----TSLEMLVLRDNN 140
Query: 121 FLTFLILGILF-------FLRCKKNKI 140
+ + F L NK+
Sbjct: 141 -IKKIQPASFFLNMRRFHVLDLTFNKV 166
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 23/94 (24%), Positives = 32/94 (34%), Gaps = 11/94 (11%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKL-SGSIPSEI-GNLQELSH 61
L +L+ L L N + + L L LTL+ L + L L
Sbjct: 77 GLSSLIILKLDYNQFL-QLETGAFNGLANLE--VLTLTQCNLDGAVLSGNFFKPLTSLEM 133
Query: 62 LDSRHIFIKGTIPYPL--GVLPLSYLDLSFNDLS 93
L R IK P + LDL+FN +
Sbjct: 134 LVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
L +L+ L LS N L SI S +L +L L LS N + ++ + L L L
Sbjct: 321 GLTHLLKLNLSQNFLG-SIDSRMFENLDKLE--VLDLSYNHIR-ALGDQSFLGLPNLKEL 376
Query: 63 DSRHIFIKGTIPY-PLGVLP-LSYLDLSFN 90
+K ++P L L + L N
Sbjct: 377 ALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-04
Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 13/114 (11%)
Query: 11 NLVSLYLSGNNLT---GSIPSSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLDSRH 66
+ + LS + + S+ S L LTL+ N+++ I L L L+
Sbjct: 276 GVKTCDLSKSKIFALLKSVFSHFTDLE--QLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQ 332
Query: 67 IFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
F+ L L LDLS+N + + L L + L N
Sbjct: 333 NFLGSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGL----PNLKELALDTN 381
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 9e-04
Identities = 27/98 (27%), Positives = 33/98 (33%), Gaps = 22/98 (22%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
+L L L+ N + I L L L LS N L SI S + L+ L
Sbjct: 297 HFTDLEQLTLAQNEIN-KIDDNAFWGLTHLL--KLNLSQNFLG-SIDSRMFENLDKLEVL 352
Query: 60 SHLDSRHIFIKGTIPYPLGV---LP-LSYLDLSFNDLS 93
L HI + LP L L L N L
Sbjct: 353 -DLSYNHI---RALGD--QSFLGLPNLKELALDTNQLK 384
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 10/73 (13%), Positives = 20/73 (27%), Gaps = 26/73 (35%)
Query: 282 VADFGM-----TMHLYCDSSNLTLLAGTYGY---------------------EKCDVYSF 315
+ DFG+ + L + G + + DV++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 316 GVVALEILMGRQP 328
G + E+ P
Sbjct: 230 GTIWYELHAREWP 242
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-05
Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP--SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
L L LT SI L +L L LS+N++SG + L+HL+
Sbjct: 38 TDEFEELEFLSTINVGLT-SIANLPKLNKLK--KLELSDNRVSGGLEVLAEKCPNLTHLN 94
Query: 64 SRHIFIKG-TIPYPLGVLP-LSYLDLSFN 90
IK + PL L L LDL
Sbjct: 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ L NL L + ++ P ++L +LT TL +NK+S I S + +L L +
Sbjct: 147 LAGLTNLQYLSIGNAQVSDLTPLANLSKLT--TLKADDNKIS-DI-SPLASLPNLIEVHL 202
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
++ I + PL L + L+ ++
Sbjct: 203 KNNQIS-DVS-PLANTSNLFIVTLTNQTIT 230
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
P +L N + + +N+T + L T L+ ++ +I + L L
Sbjct: 13 FPDP--ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TI-EGVQYLNNLI 66
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L+ + I + PL L ++ L+LS N L
Sbjct: 67 GLELKDNQIT-DLA-PLKNLTKITELELSGNPLK 98
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
L + +L G +T +I + L + L L +N+++ + + + NL +++ L+
Sbjct: 37 QADLDGITTLSAFGTGVT-TI-EGVQYLNNLIGLELKDNQIT-DL-APLKNLTKITELEL 92
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+K + + L + LDL+ ++
Sbjct: 93 SGNPLK-NVS-AIAGLQSIKTLDLTSTQIT 120
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ L NL+ L L N +T + + L LT L LS N L ++ S I LQ + LD
Sbjct: 58 GVQYLNNLIGLELKDNQIT-DL-APLKNLTKITELELSGNPLK-NV-SAIAGLQSIKTLD 113
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
I + PL L L L L N ++
Sbjct: 114 LTSTQIT-DVT-PLAGLSNLQVLYLDLNQIT 142
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 2e-05
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
I L N+ L+L+GN LT I L L + L L NK+ + S + +L++L L
Sbjct: 61 IQYLPNVTKLFLNGNKLT-DI-KPLTNLKNLGWLFLDENKIK-DL-SSLKDLKKLKSLSL 116
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
H I I L LP L L L N ++
Sbjct: 117 EHNGIS-DIN-GLVHLPQLESLYLGNNKIT 144
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 1e-04
Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 3 PLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
P + + + L ++T ++ + L + + +N+ + S+ I L ++
Sbjct: 16 PDD--AFAETIKDNLKKKSVTDAVTQNELNSIDQ--IIANNSDIK-SV-QGIQYLPNVTK 69
Query: 62 LDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L + I PL L L +L L N +
Sbjct: 70 LFLNGNKLT-DIK-PLTNLKNLGWLFLDENKIK 100
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 9e-04
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
L ++ + + +++ S+ + L + L L+ NKL+ I + NL+ L L
Sbjct: 39 QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNGNKLT-DI-KPLTNLKNLGWLFL 94
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
IK + L L L L L N +S
Sbjct: 95 DENKIK-DLS-SLKDLKKLKSLSLEHNGIS 122
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 9 LRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHLD 63
LR+L SL L GN +T +P L L L L+ NK++ + + +L L+ L
Sbjct: 79 LRSLNSLVLYGNKIT-ELPKSLFEGLFSLQ--LLLLNANKIN-CLRVDAFQDLHNLNLLS 134
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 34/261 (13%), Positives = 64/261 (24%), Gaps = 112/261 (42%)
Query: 176 IKYCFGTGGYGSVYIA--QLTSSKVIALKKLHHWENEEPASTRSFQNE------------ 221
+K C GG G +Y+A + + + + LK L H + + + E
Sbjct: 84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVH--SGDAEAQAMAMAERQFLAEVVHPSI 141
Query: 222 VDILYPKYDI-------ETLLSF--MDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSW 272
V I ++ + + M++V G++ + L
Sbjct: 142 VQI----FNFVEHTDRHGDPVGYIVMEYV-------------GGQSLK---RSKGQKLPV 181
Query: 273 -----IGLRELEAF--------------------------VADFG----MTMHLYCDSSN 297
L L A + D G + S
Sbjct: 182 AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRIN------SFG 235
Query: 298 LTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQP--GELLSSLSSSSSSDQN 344
GT G+ D+Y+ G + + G + L
Sbjct: 236 YLY--GTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPV--- 290
Query: 345 IMLLDVLDPRLSPPVDRMVVR 365
+ R++ R
Sbjct: 291 --------LKTYDSYGRLLRR 303
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSR 65
+ L L L ++ N L ++ + + L L NN+L + +L+ L L R
Sbjct: 81 LKDLTKLEELSVNRNRLK-NL-NGIPSACLSRLFLDNNELRD--TDSLIHLKNLEILSIR 136
Query: 66 HIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ +K +I LG L L LDL N+++
Sbjct: 137 NNKLK-SIV-MLGFLSKLEVLDLHGNEIT 163
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHL 62
L L L+L N L SL L + L++ NNKL SI +G L +L L
Sbjct: 100 LNGIPSACLSRLFLDNNELRD--TDSLIHLKNLEILSIRNNKLK-SI-VMLGFLSKLEVL 155
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
D I L L ++++DL+
Sbjct: 156 DLHGNEIT-NTG-GLTRLKKVNWIDLTGQKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 9e-04
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
L + + +N+ S+ + + T+ L LS+N++S + S + +L +L L
Sbjct: 37 QKELSGVQNFNGDNSNIQ-SL-AGMQFFTNLKELHLSHNQIS-DL-SPLKDLTKLEELSV 92
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLS 93
+K + + LS L L N+L
Sbjct: 93 NRNRLK-NLN-GIPSACLSRLFLDNNELR 119
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-05
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDS 64
NL L L L S+ S+L +L L LS N++ G + L L+HL+
Sbjct: 45 TAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102
Query: 65 RHIFIK--GTIPYPLGVLP-LSYLDLSFN 90
+K T+ PL L L LDL
Sbjct: 103 SGNKLKDISTL-EPLKKLECLKSLDLFNC 130
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
SL L L L N L S+P L L L L NN+L +P L EL L
Sbjct: 131 SLTKLTYLSLGYNELQ-SLPKGVFDKLTSLK--ELRLYNNQLK-RVPEGAFDKLTELKTL 186
Query: 63 DSRHIFIKGTIPYPLGVLP-LSYLDLSFN 90
+ +K L L L L N
Sbjct: 187 KLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 9e-05
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 29/125 (23%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI----GNLQEL 59
L L LYL+ N L ++P+ L L TL +++NKL ++P + NL EL
Sbjct: 59 RLTKLRLLYLNDNKLQ-TLPAGIFKELKNLE--TLWVTDNKLQ-ALPIGVFDQLVNLAEL 114
Query: 60 SHLDSRHI-FIKGTIPYPLGV---LP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISI 114
LD + + P V L L+YL L +N+L +PK + KL T L +
Sbjct: 115 -RLDRNQLKSL------PPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKL----TSLKEL 162
Query: 115 VLSIN 119
L N
Sbjct: 163 RLYNN 167
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 21/103 (20%)
Query: 280 AFVADFGMTMHLYCDSSNLT---LLAGTYGY------------EKCDVYSFGVVALEILM 324
A++ DFG+ LT GT Y + D+Y+ V E L
Sbjct: 173 AYLVDFGIASAT--TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT 230
Query: 325 GRQP--GELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365
G P G+ LS + + + I + P + D ++ R
Sbjct: 231 GSPPYQGDQLSVMGAHINQA--IPRPSTVRPGIPVAFDAVIAR 271
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
++ L++L LS N L IP L L L+L N +S +P +L LSHL
Sbjct: 76 NMTQLLTLILSYNRLR-CIPPRTFDGLKSLR--LLSLHGNDIS-VVPEGAFNDLSALSHL 131
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
SL L L L N LT +PS L L L + NKL+ +P I L L+HL
Sbjct: 86 SLTQLTVLDLGTNQLT-VLPSAVFDRLVHLK--ELFMCCNKLT-ELPRGIERLTHLTHLA 141
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
+ + L+ N L ++ L L TL L +N+++ + ++ L + L
Sbjct: 79 GASGVNEILLTSNRLE-NVQHKMFKGLESLK--TLMLRSNRIT-CVGNDSFIGLSSVRLL 134
Query: 63 D 63
Sbjct: 135 S 135
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIP--SEIGNLQ 57
+P ++ ++ L+LS N L ++L T T L L +L+ + + L
Sbjct: 24 ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDGTLPVLG 80
Query: 58 ELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L L + ++P LP L+ LD+SFN L+
Sbjct: 81 TL-DLSHNQL---QSLPLLGQTLPALTVLDVSFNRLT 113
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GN 55
++PL +L L L +S N LT S+P LG L L L N+L ++P +
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQ--ELYLKGNELK-TLPPGLLTP 146
Query: 56 LQELSHLD 63
+L L
Sbjct: 147 TPKLEKLS 154
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 6/62 (9%), Positives = 15/62 (24%), Gaps = 20/62 (32%)
Query: 282 VADFGMTMHLYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGR 326
++ + + D++SF V+ E++
Sbjct: 154 ISMADVKFSFQSPGR-----MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208
Query: 327 QP 328
P
Sbjct: 209 VP 210
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 8 SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
++ L L N + I + L +L TL L +N++S + +L L+ L
Sbjct: 76 GASHIQELQLGENKIK-EISNKMFLGLHQLK--TLNLYDNQIS-CVMPGSFEHLNSLTSL 131
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 30/132 (22%)
Query: 282 VADFGMTMHLYCDSSNLTLL----AGTYGY------------------EKCDVYSFGVVA 319
+AD G+ + D++ + + GT Y D+YSFG++
Sbjct: 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242
Query: 320 LEILMGRQPGELLSSLS------SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVL--VS 371
E+ G ++ S M V +L P D L +
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG 302
Query: 372 TILFACLRSNPK 383
++ C NP
Sbjct: 303 KLMTECWAHNPA 314
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 14/122 (11%)
Query: 8 SLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEI-GNLQELSHL 62
+L N+ +Y+S + + +L ++T + + N + I + L L L
Sbjct: 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVT--HIEIRNTRNLTYIDPDALKELPLLKFL 110
Query: 63 DSRHIFIKGTIPYPLGVLPLS---YLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+ +K P V L+++ N IP + L +++ L N
Sbjct: 111 GIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC---NETLTLKLYNN 166
Query: 120 AF 121
F
Sbjct: 167 GF 168
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 16/109 (14%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSH 61
+ S L ++ N SIP L T TL L NN + S+ N +L
Sbjct: 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL-TLKLYNNGFT-SVQGYAFNGTKLDA 183
Query: 62 LD-SRHIFIKGTIP----YPLGVLPLSYLDLSFNDLS---GGIPKHLTT 102
+ +++ ++ I + S LD+S ++ +HL
Sbjct: 184 VYLNKNKYLT-VIDKDAFGGVYSG-PSLLDVSQTSVTALPSKGLEHLKE 230
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP--SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ +L+NL L+L N + + L +L +L+L +N +S I + +L +L L
Sbjct: 86 LANLKNLGWLFLDENKVK-DLSSLKDLKKLK--SLSLEHNGIS-DING-LVHLPQLESLY 140
Query: 64 SRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
+ I I L L L L L N +S
Sbjct: 141 LGNNKIT-DIT-VLSRLTKLDTLSLEDNQIS 169
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 5e-04
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDS 64
I L N+ L+L+GN LT I L L + L L NK+ + S + +L++L L
Sbjct: 64 IQYLPNVTKLFLNGNKLT-DI-KPLANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSL 119
Query: 65 RHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
H I I L LP L L L N ++
Sbjct: 120 EHNGIS-DIN-GLVHLPQLESLYLGNNKIT 147
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 6e-04
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
+ + +L+ L LS NN+ I SSL + + L+L N + I + L
Sbjct: 40 MDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93
L + I ++ + L L L +S N ++
Sbjct: 97 ELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKIT 128
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 16/99 (16%)
Query: 143 KRNSIRRDNEFSV-WNFDGRFVFGDIIEA-----TEDFDIKYCF----GTGGYGSVYIAQ 192
KR + ++E ++ + + FVF D+ + +Y G+G G V +A
Sbjct: 96 KRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAF 155
Query: 193 LTSS------KVIALKKLHHWENEEPASTRSFQNEVDIL 225
+ ++I+ +K E + + E++IL
Sbjct: 156 ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 7e-04
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 22/71 (30%)
Query: 282 VADFGMTMHLYCDSSNLTLL----AGTYGY------------------EKCDVYSFGVVA 319
+AD G+ + + + + GT Y ++ D+Y+ G+V
Sbjct: 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 247
Query: 320 LEILMGRQPGE 330
EI G
Sbjct: 248 WEIARRCSIGG 258
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 9e-04
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 4 LEIG---SLRNLVSLYLSGNNLTGSIPS----SLGRLTSCTLTLSNNKLSGSIPSEI-GN 55
LE G L NL LY + N LT +IP+ L +LT L L++N L SIP N
Sbjct: 48 LEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLT--QLDLNDNHLK-SIPRGAFDN 103
Query: 56 LQELSHL 62
L+ L+H+
Sbjct: 104 LKSLTHI 110
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 408 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.97 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.96 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.96 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.96 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.96 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.96 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.95 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.95 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.95 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.95 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.95 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.95 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.95 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.95 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.95 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.95 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.95 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.95 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.94 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.94 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.94 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.94 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.94 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.94 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.94 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.94 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.94 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.94 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.94 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.94 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.94 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.94 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.94 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.94 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.94 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.94 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.94 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.94 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.94 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.94 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.94 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.94 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.94 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.94 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.94 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.94 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.94 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.94 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.94 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.94 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.94 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.94 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.94 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.94 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.94 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.94 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.93 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.93 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.93 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.93 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.93 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.93 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.93 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.93 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.93 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.93 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.93 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.93 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.93 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.93 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.93 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.93 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.93 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.93 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.93 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.93 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.93 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.93 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.93 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.93 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.93 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.93 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.93 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.93 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.93 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.93 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.93 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.93 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.93 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.93 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.93 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.93 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.93 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.93 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.93 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.93 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.93 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.93 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.93 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.93 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.93 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.93 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.93 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.93 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.93 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.93 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.93 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.93 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.92 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.92 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.92 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.92 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.92 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.92 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.92 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.92 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.92 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.92 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.92 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.92 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.92 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.92 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.92 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.92 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.92 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.92 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.92 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.92 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.92 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.92 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.92 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.92 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.92 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.92 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.92 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.92 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.92 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.92 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.92 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.92 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.92 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.92 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.92 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.92 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.92 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.92 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.92 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.92 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.92 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.92 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.92 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.92 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.92 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.92 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.92 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.92 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.92 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.92 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.92 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.92 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.92 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.92 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.92 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.92 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.92 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.92 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.92 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.92 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.91 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.91 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.91 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.91 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.91 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.91 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.91 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.91 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.91 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.91 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.91 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.91 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.91 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.91 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.91 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.91 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.91 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.91 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.91 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.91 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.91 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.91 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.91 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.91 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.91 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.91 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.91 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.91 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.9 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.9 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.9 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.9 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.9 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.9 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.9 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.9 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.9 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.9 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.9 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.9 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.9 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.9 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.9 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.9 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.9 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.9 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.9 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.9 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.9 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.89 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.89 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.89 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.89 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.89 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.89 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.89 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.89 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.89 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.89 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.88 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.88 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.88 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.88 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.86 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.86 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.82 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.69 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.62 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.61 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.59 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.59 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.59 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.58 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.55 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.54 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.53 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.52 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.52 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.52 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.51 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.5 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.49 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.48 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.48 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.48 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.47 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.46 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.45 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.45 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.45 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.45 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.45 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.44 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.44 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.44 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.43 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.43 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.42 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.41 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.4 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.39 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.38 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.38 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.38 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.37 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.36 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.35 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.35 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.34 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.34 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.34 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.33 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.33 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.33 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.33 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.33 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.32 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.32 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.31 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.31 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.31 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.31 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.31 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.3 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.3 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.3 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.29 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.28 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.28 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.28 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.28 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.27 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.27 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.27 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.27 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.27 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.26 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.25 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.24 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.24 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.24 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.24 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.24 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.23 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.23 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.23 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.23 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.22 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.22 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.22 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.21 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.21 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.21 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.21 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.2 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.19 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.19 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.19 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.18 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.18 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.18 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.18 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.17 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.17 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.16 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.16 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.15 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.15 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.15 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.14 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.11 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.08 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.05 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.05 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.03 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.03 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.03 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.03 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.03 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.02 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.01 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.01 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 98.99 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 98.99 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 98.98 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 98.97 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 98.97 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 98.97 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 98.97 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 98.96 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 98.94 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 98.94 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 98.93 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 98.92 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 98.91 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 98.91 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 98.9 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 98.9 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.82 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 98.82 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 98.81 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 98.8 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 98.71 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 98.69 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 98.66 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.65 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.49 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.48 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.46 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.36 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.22 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.18 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.13 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.09 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 97.99 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 97.98 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.88 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 97.67 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.63 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.6 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.31 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.28 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.26 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.25 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.02 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.92 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.16 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.15 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 96.04 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 95.6 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.51 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 94.98 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 94.39 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 93.82 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 93.38 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 92.71 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 92.71 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 91.87 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 91.82 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 89.87 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 88.11 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 87.72 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=293.06 Aligned_cols=195 Identities=17% Similarity=0.246 Sum_probs=149.6
Q ss_pred hcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++...+.||+|+||+||+|++. +++.||||+++... +....++|.+|+.++. +|||+++++++ |..
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~----~~~ 100 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGV----VTK 100 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEE----ECS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceE----EEE
Confidence 4556788999999999999973 46789999997532 3345678999999997 99999999999 888
Q ss_pred Cccchhhhhhcccchhhhhhhc-------------------------------------------------cCccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI-------------------------------------------------MKPLSWIGL 275 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------------~k~~~~~l~ 275 (408)
+...++|+||+ ++|+|.+++. +||.|++++
T Consensus 101 ~~~~~lV~Ey~-~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 101 DQPLSMIFSYC-SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SSSCEEEEECC-SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCEEEEEEEcC-CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence 89999999999 9999988751 789999999
Q ss_pred cCCceEEeecccccccCCCCC--eeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS 340 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 340 (408)
+++++||+|||+|+....... ..+...||+.| .|+|||||||+||||+| |+.||.....
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------ 253 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------ 253 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------
Confidence 999999999999997654322 23456789888 79999999999999999 8999864321
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+..+.+....+ .+.++...+.+++..||+.||++|++
T Consensus 254 ---~~~~~~i~~~~~~~----~p~~~~~~~~~li~~C~~~dP~~RPs 293 (308)
T 4gt4_A 254 ---QDVVEMIRNRQVLP----CPDDCPAWVYALMIECWNEFPSRRPR 293 (308)
T ss_dssp ---HHHHHHHHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---HHHHHHHHcCCCCC----CcccchHHHHHHHHHHcCCChhHCcC
Confidence 11122222222111 11234556788999999999999944
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=287.35 Aligned_cols=199 Identities=20% Similarity=0.326 Sum_probs=144.2
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+++...+.||+|+||+||+|++.+ .||||+++... .+....++|.+|++++. +|+|+++++++ |.+ +..+
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~----~~~-~~~~ 107 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGY----MTK-DNLA 107 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE----ECS-SSCE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEC-CeEE
Confidence 466778899999999999999854 58999997533 33455678999999998 88888888877 655 4578
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+|+||+ ++|+|.+++. +||.|+++++++++||+|||+|+......
T Consensus 108 iVmEy~-~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 108 IVTQWC-EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EEEECC-SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred EEEEcC-CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 999999 9999998873 79999999999999999999999765332
Q ss_pred --CeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 296 --SNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 296 --~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
...+..+||+.| .|+|||||||+||||+||+.||......... ..........|.+.
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~----~~~~~~~~~~p~~~-- 260 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI----IFMVGRGYASPDLS-- 260 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH----HHHHHTTCCCCCST--
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH----HHHHhcCCCCCCcc--
Confidence 223567899998 3799999999999999999999743211100 00000111222222
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+...+.+++..||+.||++|++
T Consensus 261 --~~~~~~~~~l~~li~~cl~~dP~~RPs 287 (307)
T 3omv_A 261 --KLYKNCPKAMKRLVADCVKKVKEERPL 287 (307)
T ss_dssp --TSCTTSCHHHHHHHHHHTCSSSTTSCC
T ss_pred --cccccchHHHHHHHHHHcCCCHhHCcC
Confidence 112234556778999999999999943
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-38 Score=288.99 Aligned_cols=195 Identities=19% Similarity=0.310 Sum_probs=148.5
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+++|. +|||+++++++ |.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~----~~ 85 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGV----CV 85 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEE----Ee
Confidence 46788899999999999999874 4778999999752 3345678999999998 89999999998 88
Q ss_pred CCccchhhhhhcccchhhhhhhc----------------------------------------------cCccccccccC
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI----------------------------------------------MKPLSWIGLRE 277 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------------~k~~~~~l~~~ 277 (408)
+++..++|+||+ ++|+|.+++. +||.|++++++
T Consensus 86 ~~~~~~lV~Ey~-~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 86 EGDPLIMVFEYM-KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSSSEEEEEECC-TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred eCCEEEEEEEcC-CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC
Confidence 888999999999 9999987651 78999999999
Q ss_pred CceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcccc
Q 037624 278 LEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSD 342 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~ 342 (408)
+++||+|||+|+......... ....||+.| .|+|||||||+||||+| |+.||.....
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------- 236 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------- 236 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 999999999999765433222 235688888 79999999999999999 8999874321
Q ss_pred ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+..+.+..... .+..+...+.+++..||+.||++|++
T Consensus 237 -~~~~~~i~~~~~~~----~p~~~~~~~~~li~~cl~~dP~~RPs 276 (299)
T 4asz_A 237 -NEVIECITQGRVLQ----RPRTCPQEVYELMLGCWQREPHMRKN 276 (299)
T ss_dssp -HHHHHHHHHTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred -HHHHHHHHcCCCCC----CCccchHHHHHHHHHHcCCChhHCcC
Confidence 11122222221111 01123456778999999999999944
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=290.38 Aligned_cols=194 Identities=22% Similarity=0.334 Sum_probs=142.5
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||+||+|++. +++.||||+++.. +....++|.+|+++|. +|+|+++++++ |.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~----~~ 113 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGV----CT 113 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EC
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEE----EE
Confidence 46778899999999999999874 4788999999752 3445678999999998 89999999998 88
Q ss_pred CCccchhhhhhcccchhhhhhh------------------------------------------------ccCccccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTM------------------------------------------------IMKPLSWIGL 275 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------~~k~~~~~l~ 275 (408)
++...++|+||+ ++|+|.+++ ++||.|++++
T Consensus 114 ~~~~~~lV~Ey~-~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 114 EGRPLLMVFEYM-RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 192 (329)
T ss_dssp SSSSEEEEEECC-TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred ECCEEEEEEEcC-CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence 889999999999 999998753 1789999999
Q ss_pred cCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS 340 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 340 (408)
+++++||+|||+|+........ .+...||+.| .++|||||||+||||+| |+.||......
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----- 267 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----- 267 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----
Confidence 9999999999999976543322 2456789888 78999999999999999 89998743211
Q ss_pred ccccchhhhccCC-CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDP-RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+..+.+. ++..+ ..+...+.+++..||+.||++|++
T Consensus 268 ----~~~~~i~~g~~~~~p-----~~~~~~~~~li~~cl~~dP~~RPs 306 (329)
T 4aoj_A 268 ----EAIDCITQGRELERP-----RACPPEVYAIMRGCWQREPQQRHS 306 (329)
T ss_dssp ----HHHHHHHHTCCCCCC-----TTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred ----HHHHHHHcCCCCCCc-----ccccHHHHHHHHHHcCcChhHCcC
Confidence 111112111 11111 123455778899999999999944
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=277.06 Aligned_cols=217 Identities=19% Similarity=0.303 Sum_probs=147.8
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHH--HHHHhc--ccCCcceeeeEeEeeecCC--
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQN--EVDILY--PKYDIETLLSFMDFVCIKD-- 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~--E~~~l~--~~~n~~~l~~~~~~~~~~~-- 245 (408)
.++...+.||+|+||+||+|++ +|+.||||+++... .+++.. |+..+. +|+|+++++++ |..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~----~~~~~~ 71 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAA----DNKDNG 71 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEE----EEEECS
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEE----EEecCC
Confidence 3567789999999999999998 68899999996421 234444 444443 79998888888 5443
Q ss_pred --ccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCCceEEe
Q 037624 246 --ACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRELEAFVA 283 (408)
Q Consensus 246 --~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~~~ki~ 283 (408)
...++|+||+ ++|+|.+++. +||.|+++++++++||+
T Consensus 72 ~~~~~~lV~Ey~-~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~ 150 (303)
T 3hmm_A 72 TWTQLWLVSDYH-EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp SSEEEEEEEECC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEEecCC-CCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence 3578999999 9999988773 68999999999999999
Q ss_pred ecccccccCCCCCee----eecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCc--
Q 037624 284 DFGMTMHLYCDSSNL----TLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSS-- 339 (408)
Q Consensus 284 DfGla~~~~~~~~~~----~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~-- 339 (408)
|||+|+......... ...+||++| .|+|||||||+||||+||+.|+..........
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 999999875543322 346799998 27999999999999999998875432211100
Q ss_pred ---cc-cccchhhhccCCCCCCccc--hhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHhh
Q 037624 340 ---SS-DQNIMLLDVLDPRLSPPVD--RMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRN 400 (408)
Q Consensus 340 ---~~-~~~~~~~~~~d~~l~~~~~--~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~~ 400 (408)
.. ........+.+..++++.. ....++...+.+++..||+.||++|+++....-.++++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 00 0011111223333332211 2233566778899999999999999554333333455543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-36 Score=276.41 Aligned_cols=199 Identities=16% Similarity=0.243 Sum_probs=154.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++......+....+.+.+|+++|. +|||+++++.+ +.++...
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~----~~~~~~~ 107 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT----FQDDEKL 107 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EEeCCEE
Confidence 5799999999999999999997 568999999997543222334678999999997 78888887777 6778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||||+ ++|+|.+++. +||.|+++++++++||+|||+|+.+....
T Consensus 108 yivmEy~-~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 108 YFGLSYA-KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp EEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EEEEecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999 9999998873 89999999999999999999999875433
Q ss_pred --CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 296 --SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 296 --~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
....+.+||+.| .++||||+||++|||+||+.||..... ......+....+..+. .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---------~~~~~~i~~~~~~~p~-~ 256 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---------GLIFAKIIKLEYDFPE-K 256 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHTCCCCCT-T
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHcCCCCCCc-c
Confidence 234567999999 689999999999999999999964221 1112223222222111 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
....+.+++..|++.||++|++..
T Consensus 257 ----~s~~~~dli~~lL~~dp~~R~t~~ 280 (311)
T 4aw0_A 257 ----FFPKARDLVEKLLVLDATKRLGCE 280 (311)
T ss_dssp ----CCHHHHHHHHHHSCSSGGGSTTSG
T ss_pred ----cCHHHHHHHHHHccCCHhHCcChH
Confidence 122356788899999999996543
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=272.25 Aligned_cols=199 Identities=17% Similarity=0.231 Sum_probs=147.4
Q ss_pred ccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 175 DIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
...+.||+|+||+||+|+.. ++..||||++.... ......+.|.+|++++. +|||++++++++......+...++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 45577999999999999984 58899999997643 23345678999999997 8888888888754333445678999
Q ss_pred hhhcccchhhhhhhc-----------------------------------cCccccccc-cCCceEEeecccccccCCCC
Q 037624 252 NTWRGEACSVFCTMI-----------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~~~ 295 (408)
|||+ ++|+|.+++. +||.|++++ +++++||+|||+|+....
T Consensus 108 mEy~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-- 184 (290)
T 3fpq_A 108 TELM-TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-- 184 (290)
T ss_dssp EECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT--
T ss_pred EeCC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC--
Confidence 9999 9999998873 789999998 589999999999986532
Q ss_pred CeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 296 SNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 296 ~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
....+.+||+.| .++|||||||++|||+||+.||...... ..+...+.....++ ....
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~---------~~~~~~i~~~~~~~--~~~~ 253 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA---------AQIYRRVTSGVKPA--SFDK 253 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---------HHHHHHHTTTCCCG--GGGG
T ss_pred CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH---------HHHHHHHHcCCCCC--CCCc
Confidence 334567899999 7899999999999999999999642211 11112222111111 1111
Q ss_pred HHHHHHHHHHHhhccCCCCCcCCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..||+.||++|++.
T Consensus 254 ~~~~~~~~li~~~L~~dP~~R~s~ 277 (290)
T 3fpq_A 254 VAIPEVKEIIEGCIRQNKDERYSI 277 (290)
T ss_dssp CCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred cCCHHHHHHHHHHccCChhHCcCH
Confidence 122346688899999999999653
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=277.92 Aligned_cols=197 Identities=21% Similarity=0.274 Sum_probs=153.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+++|. +|+|+++++++ +.+++..
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~----~~~~~~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNS----YLVGDEL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCCCcEEEE----EEECCEE
Confidence 4588899999999999999998 4699999999975432 23567899999997 88888888887 7778889
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||||+ ++|+|.+++. +||.|++++.++++||+|||+|+.+.....
T Consensus 147 ~ivmEy~-~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 147 WVVMEFL-EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp EEEECCC-TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred EEEEeCC-CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 9999999 9999988773 899999999999999999999998866555
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
..++.+||+.| .++||||+||++|||+||+.||........ ...+.+...+.+... .
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------~~~i~~~~~~~~~~~-----~ 294 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNLPPRLKNL-----H 294 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSSCCCCSCG-----G
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHcCCCCCCCcc-----c
Confidence 56678999999 789999999999999999999964321110 011112222222221 1
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~t 317 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRAT 317 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCC
T ss_pred cCCHHHHHHHHHHcCCChhHCcC
Confidence 22334567888999999999965
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=284.37 Aligned_cols=197 Identities=15% Similarity=0.220 Sum_probs=147.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+. .+|+.||||++.... ......+.|.+|+++|. +|+|+++++++ +.+++..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~----~~~~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHPNIVQYRES----FEENGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-CCHHHHHHHHHHHHHHHHCCCCCCCcEEEE----EEECCEE
Confidence 5789999999999999999997 569999999997643 23345678999999997 88888888777 6778889
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++||||+ ++|+|.+++. +||.|+++++++++||+|||+|+.+..
T Consensus 99 yiVmEy~-~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 99 YIVMDYC-EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EEEEECC-TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EEEEeCC-CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999 9999988772 899999999999999999999998754
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.....+..+||+.| .++||||+||++|||+||+.||..... ...+..++........ .
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---------~~~~~~i~~~~~~~~~-~ 247 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM---------KNLVLKIISGSFPPVS-L 247 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHHHHHTCCCCCC-T
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---------HHHHHHHHcCCCCCCC-c
Confidence 33334567899999 689999999999999999999964321 1112223322221110 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 248 ---~~s~~~~~li~~~L~~dP~~R~s 270 (350)
T 4b9d_A 248 ---HYSYDLRSLVSQLFKRNPRDRPS 270 (350)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---cCCHHHHHHHHHHccCChhHCcC
Confidence 12234667888999999999954
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=275.78 Aligned_cols=197 Identities=20% Similarity=0.288 Sum_probs=143.3
Q ss_pred hhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||+||+|+.. .++.||||+++.... .......+.+|+++|. +|||+++++++ +.++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~----~~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVRDRVRTKMERDILVEVNHPFIVKLHYA----FQTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE-EEEECC------CCCCCCCCTTEECEEEE----EEET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc-ChHHHHHHHHHHHHHHHCCCCCCCeEEEE----EEEC
Confidence 57999999999999999999862 467899999975432 1223456889999997 77777777777 6677
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+..++||||+ ++|+|.+++. +||.|+++++++++||+|||+|+...
T Consensus 99 ~~~~ivmEy~-~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 99 GKLYLILDFL-RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp TEEEEEECCC-TTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred CEEEEEEEcC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 8899999999 9999998873 89999999999999999999999765
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.......+.+||+.| .++||||+||++|||+||+.||..... ...+..+.......+
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---------~~~~~~i~~~~~~~p-- 246 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR---------KETMTMILKAKLGMP-- 246 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCC--
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH---------HHHHHHHHcCCCCCC--
Confidence 544445667899999 789999999999999999999964321 111222322222211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..||+.||++|+++
T Consensus 247 ~---~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 247 Q---FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred C---cCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 112345678889999999999764
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=278.15 Aligned_cols=197 Identities=21% Similarity=0.272 Sum_probs=153.5
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++|. +|+|+++++++ +..++..
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~HpnIV~l~~~----~~~~~~~ 223 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNS----YLVGDEL 223 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT---CSSGGGHHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCCCceEEE----EEECCEE
Confidence 5689999999999999999998 469999999997533 223567899999997 88888888877 6777889
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||||+ ++|+|.+++. +||.|++++.++++||+|||+|+.+.....
T Consensus 224 ~iVmEy~-~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 224 WVVMEFL-EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp EEEEECC-TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred EEEEeCC-CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 9999999 9999988773 899999999999999999999998866655
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
..++.+||+.| .++|||||||++|||+||+.||........ ...+.+...+.+... .
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------~~~i~~~~~~~~~~~-----~ 371 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNLPPRLKNL-----H 371 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCSCT-----T
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHcCCCCCCccc-----c
Confidence 56778999999 789999999999999999999964321110 011112222222211 1
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~t 394 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRAT 394 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCC
T ss_pred cCCHHHHHHHHHHcCCChhHCcC
Confidence 12234567888999999999965
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=280.13 Aligned_cols=209 Identities=16% Similarity=0.208 Sum_probs=152.8
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceee
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLL 235 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~ 235 (408)
.+++...++|+..+.||+|+||+||+|++.. ++.||||++.... .....++|.+|+++|. +|+|+++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 3455556789999999999999999998632 4689999997532 2334678999999987 447888888
Q ss_pred eEeEeeecC-Cccchhhhhhcccchhhhhhhc------------------------------------------------
Q 037624 236 SFMDFVCIK-DACFWFMNTWRGEACSVFCTMI------------------------------------------------ 266 (408)
Q Consensus 236 ~~~~~~~~~-~~~~~lv~e~~~~~g~l~~~l~------------------------------------------------ 266 (408)
++ |.. +...++|+||+ ++|+|.+++.
T Consensus 135 g~----~~~~~~~~~iV~Ey~-~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHR 209 (353)
T 4ase_A 135 GA----CTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 209 (353)
T ss_dssp EE----ECCTTSCCEEEEECC-TTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred EE----EEecCCEEEEEEEcC-CCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecC
Confidence 87 765 45678999999 9999987651
Q ss_pred -cCccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCc
Q 037624 267 -MKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGE 330 (408)
Q Consensus 267 -~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~ 330 (408)
+||.|+++++++++||+|||+|+.+..+... .+..+||+.| .|+|||||||+||||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 7899999999999999999999987554432 2456789888 79999999999999998 999997
Q ss_pred ccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcC--CCcccc
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM--QKPFHE 392 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm--~~~~~~ 392 (408)
..... ..+...+....+.+. +..+...+.+++..||+.||++|+ ++++..
T Consensus 290 ~~~~~---------~~~~~~i~~g~~~~~---p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 290 GVKID---------EEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp TCCCS---------HHHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHH---------HHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 43211 111122111111111 112334567888999999999994 444433
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=260.09 Aligned_cols=196 Identities=19% Similarity=0.265 Sum_probs=134.5
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++......+....+.+.+|++++. +|||+++++++ +.+++..
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~----~~~~~~~ 88 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV----IKSKDEI 88 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE----EECSSEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE----EEECCEE
Confidence 5799999999999999999997 568999999997654444445678999999997 88888888877 6777889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||||+ + |+|.+++. +||.|+++++++++||+|||+|+.....
T Consensus 89 ~ivmEy~-~-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 89 IMVIEYA-G-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp EEEEECC-C-EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEEEeCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 9999998 4 67877762 8999999999999999999999876433
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
....+.+||+.| .++||||+||++|||+||+.||..... ......+.......+ ..
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~---------~~~~~~i~~~~~~~p--~~ 234 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI---------PVLFKNISNGVYTLP--KF 234 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHTCCCCC--TT
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHcCCCCCC--CC
Confidence 234557899998 589999999999999999999964211 111122222222111 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
....+.+++..|++.||++|++.
T Consensus 235 ---~s~~~~~li~~~L~~dP~~R~s~ 257 (275)
T 3hyh_A 235 ---LSPGAAGLIKRMLIVNPLNRISI 257 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCH
Confidence 12235678889999999999753
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=267.53 Aligned_cols=193 Identities=17% Similarity=0.079 Sum_probs=142.6
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|...+.||+|+||+||+|+. .+|+.||||+++... .+.+|+.++. +|||+++++++ +.++..
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~--------~~~~E~~il~~l~HpnIV~l~~~----~~~~~~ 124 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--------FRVEELVACAGLSSPRIVPLYGA----VREGPW 124 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--------CCTHHHHTTTTCCCTTBCCEEEE----EEETTE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH--------hHHHHHHHHHhCCCCCCCcEEEE----EEECCE
Confidence 45788889999999999999998 458999999997522 2247999987 88888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCC-ceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL-EAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~-~~ki~DfGla~~~~~ 293 (408)
.++||||+ ++|+|.+++. +||.|++++.++ ++||+|||+|+.+..
T Consensus 125 ~~ivmEy~-~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 125 VNIFMELL-EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp EEEEECCC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred EEEEEecc-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 99999999 9999998873 899999999887 699999999998754
Q ss_pred CCCe-----eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 294 DSSN-----LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 294 ~~~~-----~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
+... ....+||+.| .++|||||||++|||+||+.||........ ...+......
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---------~~~i~~~~~~ 274 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---------CLKIASEPPP 274 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---------HHHHHHSCCG
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---------HHHHHcCCCC
Confidence 3221 2346899999 789999999999999999999964321111 1111111110
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ...+......+.+++..||+.||++|++
T Consensus 275 ~--~~~~~~~s~~~~~li~~~L~~dP~~R~s 303 (336)
T 4g3f_A 275 I--REIPPSCAPLTAQAIQEGLRKEPVHRAS 303 (336)
T ss_dssp G--GGSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred c--hhcCccCCHHHHHHHHHHccCCHhHCcC
Confidence 0 0011122344667888999999999954
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-32 Score=250.65 Aligned_cols=198 Identities=20% Similarity=0.232 Sum_probs=133.7
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee------
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC------ 242 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~------ 242 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++... .....+.|.+|+++|. +|||++++++++....
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 5799999999999999999997 468999999997532 3345578999999997 7777777776632110
Q ss_pred --cCCccchhhhhhcccchhhhhhhc------------------------------------cCccccccccCCceEEee
Q 037624 243 --IKDACFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 243 --~~~~~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~~~~~ki~D 284 (408)
......++++||+ ++|+|.+++. +||.|++++.++++||+|
T Consensus 83 ~~~~~~~l~ivmE~~-~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 83 PSSPKVYLYIQMQLC-RKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ----CEEEEEEEECC-CSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcEEEEEEecC-CCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence 0122468999999 8888877652 799999999999999999
Q ss_pred cccccccCCCCCe------------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCcc
Q 037624 285 FGMTMHLYCDSSN------------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSS 340 (408)
Q Consensus 285 fGla~~~~~~~~~------------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 340 (408)
||+|+.+..+... .++.+||+.| .++|||||||++|||++ ||....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------- 231 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------- 231 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-------
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-------
Confidence 9999987543211 2346899999 78999999999999997 764211
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+..+.+...+ ....+......+++..||+.||++|++
T Consensus 232 -~~~~~~~~~~~~~~p----~~~~~~~~~~~~li~~~L~~dP~~Rps 273 (299)
T 4g31_A 232 -ERVRTLTDVRNLKFP----PLFTQKYPCEYVMVQDMLSPSPMERPE 273 (299)
T ss_dssp -HHHHHHHHHHTTCCC----HHHHHHCHHHHHHHHHHTCSSGGGSCC
T ss_pred -HHHHHHHHHhcCCCC----CCCcccCHHHHHHHHHHcCCChhHCcC
Confidence 111112223332222 222233344567889999999999955
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=250.84 Aligned_cols=157 Identities=21% Similarity=0.253 Sum_probs=122.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee--ecCCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV--CIKDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~--~~~~~ 246 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ......+.+.+|+++|. +|+|++++++++... ..+..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 5699999999999999999997 569999999997532 23344567899999996 777777776662211 12335
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++||||+ + |+|..++. +||.|++++.++.+||+|||+|+.+..
T Consensus 133 ~~~ivmE~~-~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 133 SVYVVLDLM-E-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp CEEEEEECC-S-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEEEeCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 678999999 5 56777662 899999999999999999999987643
Q ss_pred CC----CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DS----SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~----~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.. ...++.+||+.| .++||||+||+++||+||+.||..
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 21 223567899988 678999999999999999999964
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=263.88 Aligned_cols=198 Identities=17% Similarity=0.208 Sum_probs=144.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHH---HHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNE---VDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E---~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..++||+|+||+||+|+. .+|+.||||++.+...........+.+| ++++. .|||+++++.. +.+.
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~----f~~~ 264 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA----FHTP 264 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE----EECS
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE----EEEC
Confidence 6899999999999999999998 4589999999975332111222333444 55554 67888877777 7778
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
...++||||+ ++|+|..++. +||.|++++.++++||+|||+|+.+.
T Consensus 265 ~~lylVmEy~-~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 265 DKLSFILDLM-NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp SEEEEEECCC-CSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred CEEEEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 8899999999 9999998873 89999999999999999999999875
Q ss_pred CCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
... ..+.+||+.| .++||||+||++|||+||+.||....... .......+....+..+
T Consensus 344 ~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~------~~~i~~~i~~~~~~~p- 414 (689)
T 3v5w_A 344 KKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------KHEIDRMTLTMAVELP- 414 (689)
T ss_dssp SCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC------HHHHHHHHHHCCCCCC-
T ss_pred CCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhhcCCCCCCC-
Confidence 432 3456899988 67999999999999999999996432110 0011112222222211
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. ....+.+++..|++.||++|++
T Consensus 415 -~~---~S~~a~dLI~~lL~~dP~~Rl~ 438 (689)
T 3v5w_A 415 -DS---FSPELRSLLEGLLQRDVNRRLG 438 (689)
T ss_dssp -TT---SCHHHHHHHHHHTCSCGGGCTT
T ss_pred -cc---CCHHHHHHHHHHccCCHhHCCC
Confidence 11 1223567888999999999965
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=242.15 Aligned_cols=218 Identities=24% Similarity=0.406 Sum_probs=166.7
Q ss_pred CcccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeE
Q 037624 160 GRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSF 237 (408)
Q Consensus 160 ~~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~ 237 (408)
..+++.++..++++|...+.||+|+||.||+|+..+|+.||||++...... .....|.+|++++. +|+|+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 478899999999999999999999999999999888999999999764322 22347899999987 89999998888
Q ss_pred eEeeecCCccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccC
Q 037624 238 MDFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRE 277 (408)
Q Consensus 238 ~~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~ 277 (408)
+......++++||+ ++|+|.+++. ++|.|++++.+
T Consensus 96 ----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 96 ----CMTPTERLLVYPYM-ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp ----ECCSSCCEEEEECC-TTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred ----EecCCceEEEEEec-cCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 77888889999999 8877765541 57888899999
Q ss_pred CceEEeecccccccCCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccC-------
Q 037624 278 LEAFVADFGMTMHLYCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSS------- 337 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~------- 337 (408)
+.+||+|||+++........ .....||.+| .++|||||||+++||+||+.||+.......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 99999999999877543332 3445688888 689999999999999999999963211100
Q ss_pred -CccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 338 -SSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 338 -~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+..+.+..+.. ....++...+.+++..||+.||++|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps 298 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQG---NYKDEEVEQLIQVALLCTQSSPMERPK 298 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTT---SCCHHHHHHHHHHHHHHTCSCGGGSCC
T ss_pred HHHHHhhchhhhhhcChhhcc---ccCHHHHHHHHHHHHHHhCcCCccCCC
Confidence 01111222344555555544 234566778899999999999999944
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=240.52 Aligned_cols=216 Identities=25% Similarity=0.365 Sum_probs=164.1
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEe
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFM 238 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~ 238 (408)
++++.++..++++|+..+.||+|+||.||+|+..+|+.||||++... .....+.|.+|++++. +|+|+++++++
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~- 103 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGF- 103 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEE-
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEE-
Confidence 45666777889999999999999999999999988999999998653 2335678999999997 88888888888
Q ss_pred EeeecCCccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceE
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAF 281 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~k 281 (408)
+......++++||+ ++|+|.+++. ++|.|++++.++.+|
T Consensus 104 ---~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 179 (321)
T 2qkw_B 104 ---CDERNEMILIYKYM-ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK 179 (321)
T ss_dssp ---CCCTTCCEEEEECC-TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEE
T ss_pred ---EcCCCeEEEEEEcC-CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEE
Confidence 77888899999999 8888876651 788899999999999
Q ss_pred EeecccccccCCCCC--eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCC------ccc
Q 037624 282 VADFGMTMHLYCDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS------SSS 341 (408)
Q Consensus 282 i~DfGla~~~~~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~------~~~ 341 (408)
|+|||+++....... ......||..| .++|||||||+++||+||+.||......... ...
T Consensus 180 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~ 259 (321)
T 2qkw_B 180 ITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259 (321)
T ss_dssp ECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH
T ss_pred EeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc
Confidence 999999987543221 12345678888 6899999999999999999998643221110 001
Q ss_pred cccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 342 DQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 342 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+..++++.+... ...+....+.+++..||+.||++|++
T Consensus 260 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps 302 (321)
T 2qkw_B 260 HNNGQLEQIVDPNLADK---IRPESLRKFGDTAVKCLALSSEDRPS 302 (321)
T ss_dssp HTTTCCCSSSSSSCTTC---SCHHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred cccccHHHhcChhhccc---cCHHHHHHHHHHHHHHcCCCcccCcC
Confidence 11122345556655432 23456778889999999999999944
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=240.86 Aligned_cols=154 Identities=24% Similarity=0.299 Sum_probs=122.8
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
+.+..+.|+..+.||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|. .|+|++++..+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~-- 88 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYC-- 88 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEE--
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEE--
Confidence 3345678999999999999999999852 46789999986532 2456889999886 58888888777
Q ss_pred eeecCCccchhhhhhcccchhhhhhhc------------------------------cCccccccccC-CceEEeecccc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTMI------------------------------MKPLSWIGLRE-LEAFVADFGMT 288 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l~------------------------------~k~~~~~l~~~-~~~ki~DfGla 288 (408)
+...+..++|+||+ ++|+|.+++. +||.|++++.+ +++||+|||+|
T Consensus 89 --~~~~~~~~lvmE~~-~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 89 --FRKNDHVVIAMPYL-EHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp --EEETTEEEEEEECC-CCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred --EEECCEEEEEEeCC-CcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 66778899999999 8999988763 89999999866 79999999999
Q ss_pred cccCCCC----------------------------CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCC
Q 037624 289 MHLYCDS----------------------------SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQ 327 (408)
Q Consensus 289 ~~~~~~~----------------------------~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~ 327 (408)
+...... ...+..+||++| .++||||+||+++||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 8653221 112345799888 57899999999999999999
Q ss_pred CCc
Q 037624 328 PGE 330 (408)
Q Consensus 328 p~~ 330 (408)
||.
T Consensus 246 Pf~ 248 (361)
T 4f9c_A 246 PFY 248 (361)
T ss_dssp SSS
T ss_pred CCC
Confidence 984
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=253.82 Aligned_cols=197 Identities=19% Similarity=0.205 Sum_probs=149.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||+|.+.... ....+.+.+|+++|. +|+|++++.++ +.++...
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~----~~~~~~~ 229 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDA----FEDDNEM 229 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEE----EECSSEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEE----EEECCEE
Confidence 6899999999999999999998 468999999996532 234567889999997 88888888877 7778889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCcccccccc--CCceEEeecccccccC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLR--ELEAFVADFGMTMHLY 292 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~--~~~~ki~DfGla~~~~ 292 (408)
++++||+ ++|+|.+++. +||.|++++. .+.+||+|||+|+.+.
T Consensus 230 ~iv~E~~-~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 230 VMIYEFM-SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEEEECC-CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEEEeec-CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999 9999987762 7899999984 4899999999999875
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.. ......+||+.| .++||||+||++|||++|+.||..... ...+..+.......+.
T Consensus 309 ~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~---------~~~~~~i~~~~~~~~~- 377 (573)
T 3uto_A 309 PK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---------DETLRNVKSCDWNMDD- 377 (573)
T ss_dssp TT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHHHHHTTCCCCCS-
T ss_pred CC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---------HHHHHHHHhCCCCCCc-
Confidence 44 344567899988 689999999999999999999964321 1112222222211110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..||+.||++|++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t 404 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMT 404 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcC
Confidence 111112234567888999999999954
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=242.13 Aligned_cols=208 Identities=18% Similarity=0.298 Sum_probs=151.5
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|+..+.||+|+||.||+|+.. +++.||||+++..........+.+.+|..++. +|+|++++.++ +....
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~----~~~~~ 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC----FQTES 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE----EECSS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE----EEECC
Confidence 358999999999999999999985 57899999998654444445567888988875 78888888888 77788
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++|+||+ ++|+|..++. +||.|++++.++++||+|||+++....
T Consensus 127 ~~~lV~E~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 127 RLFFVIEYV-NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEEcC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 899999999 8999877662 799999999999999999999987544
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
........+||+.| .++|||||||+++||+||+.||....................+....+..+.
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-- 283 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-- 283 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT--
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC--
Confidence 44445667899888 6899999999999999999999643211110011111111222222222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..|++.||++|++.
T Consensus 284 ---~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 284 ---SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 112345678889999999999664
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=230.17 Aligned_cols=209 Identities=19% Similarity=0.250 Sum_probs=157.3
Q ss_pred CcccHHHHHHHHhh----------cccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--
Q 037624 160 GRFVFGDIIEATED----------FDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-- 226 (408)
Q Consensus 160 ~~~~~~~l~~at~~----------f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-- 226 (408)
+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhC
Confidence 47889999999875 777789999999999999985 69999999997532 234567899999997
Q ss_pred ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhhc--------------------------------cCcccccc
Q 037624 227 PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIG 274 (408)
Q Consensus 227 ~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l 274 (408)
+|+|+++++++ +......++++||+ ++++|.+++. ++|.|+++
T Consensus 100 ~h~niv~~~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll 174 (321)
T 2c30_A 100 QHFNVVEMYKS----YLVGEELWVLMEFL-QGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174 (321)
T ss_dssp CCTTBCCEEEE----EEETTEEEEEECCC-CSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCCCcceEEEE----EEECCEEEEEEecC-CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 88888888887 66777889999999 8888877652 78999999
Q ss_pred ccCCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccc
Q 037624 275 LRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD 342 (408)
Q Consensus 275 ~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~ 342 (408)
+.++.+||+|||+++.............||..| .++|||||||+++||+||+.||.......
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------ 248 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------ 248 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------
T ss_pred CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------
Confidence 999999999999998775544344556788877 68999999999999999999986432111
Q ss_pred ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.....+.+... ......+.+++..||+.||++|++
T Consensus 249 ~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps 288 (321)
T 2c30_A 249 AMKRLRDSPPPKLKNS-----HKVSPVLRDFLERMLVRDPQERAT 288 (321)
T ss_dssp HHHHHHHSSCCCCTTG-----GGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HHHHHhcCCCCCcCcc-----ccCCHHHHHHHHHHccCChhhCcC
Confidence 0011122222222211 112334667888999999999944
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=226.85 Aligned_cols=218 Identities=21% Similarity=0.347 Sum_probs=165.4
Q ss_pred CcccHHHHHHHHhhcccc------eeecccceeEEEEEEeCCCcEEEEEecccccC-CCcchhhHHHHHHHHhc--ccCC
Q 037624 160 GRFVFGDIIEATEDFDIK------YCFGTGGYGSVYIAQLTSSKVIALKKLHHWEN-EEPASTRSFQNEVDILY--PKYD 230 (408)
Q Consensus 160 ~~~~~~~l~~at~~f~~~------~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~l~--~~~n 230 (408)
..|++.++..+|++|+.. +.||+|+||.||+|.. +++.||||++..... ......+.|.+|++++. +|+|
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 378999999999999988 8999999999999998 678999999875322 22345678999999987 8899
Q ss_pred cceeeeEeEeeecCCccchhhhhhcccchhhhhhhc------------------------------------cCcccccc
Q 037624 231 IETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIG 274 (408)
Q Consensus 231 ~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l 274 (408)
+++++++ +......++++||+ ++++|.+++. ++|.|+++
T Consensus 92 i~~~~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGF----SSDGDDLCLVYVYM-PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEE----ECSSSSCEEEEECC-TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred eEEEEEE----EecCCceEEEEEec-CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE
Confidence 8888888 77788889999999 8888876541 68889999
Q ss_pred ccCCceEEeecccccccCCCCCe--eeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCcc-
Q 037624 275 LRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSS- 340 (408)
Q Consensus 275 ~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~- 340 (408)
++++.+||+|||+++........ .....||..| .++|||||||+++||+||+.||...........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 99999999999999876543222 2335678777 689999999999999999999875432211100
Q ss_pred ----ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 ----SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ----~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+.+++.+.. ........+.+++..||+.+|++|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rps 293 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMND----ADSTSVEAMYSVASQCLHEKKNKRPD 293 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSC----CCHHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHhhhhhhhhhhhccccccc----cchHHHHHHHHHHHHHcCCCcccCcC
Confidence 01112234555555542 22345667889999999999999954
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=233.43 Aligned_cols=207 Identities=19% Similarity=0.313 Sum_probs=151.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|..++. +|+|++++.++ +.....
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~----~~~~~~ 84 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC----FQTESR 84 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEE----EECSSE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEE----EEeCCE
Confidence 57889999999999999999985 58899999998654444445667888998875 68888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++|+|..++. +||.|++++.++++||+|||+++.....
T Consensus 85 ~~lv~e~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 85 LFFVIEYV-NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EEEEECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999 8888877662 7899999999999999999999875444
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.......+||+.| .++|||||||+++||+||+.||....................+....+.-+ .
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~- 240 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--R- 240 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC--T-
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC--C-
Confidence 3344567888888 689999999999999999999964321111000011111112222222211 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..|++.||++|++.
T Consensus 241 --~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 --SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred --CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 112346678889999999999654
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-29 Score=236.55 Aligned_cols=199 Identities=20% Similarity=0.280 Sum_probs=145.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..........+.+.+|..++. .|+|+++++++ +....
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~----~~~~~ 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC----FQTPD 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEE----EECSS
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEE----EEeCC
Confidence 468999999999999999999984 58899999997532222233566788888886 58888888887 77788
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++|+||+ ++|+|..++. +||.|++++.++++||+|||+|+....
T Consensus 98 ~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 98 RLFFVMEFV-NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 899999999 8999887662 799999999999999999999987544
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
........+||+.| .++|||||||++|||+||+.||..... ......+.......+. .
T Consensus 177 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---------~~~~~~i~~~~~~~p~-~ 246 (353)
T 3txo_A 177 NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE---------DDLFEAILNDEVVYPT-W 246 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCCT-T
T ss_pred CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH---------HHHHHHHHcCCCCCCC-C
Confidence 44445567899988 689999999999999999999964321 1112233332222211 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
....+.+++..|++.||++|++.
T Consensus 247 ----~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 247 ----LHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTS
T ss_pred ----CCHHHHHHHHHHhhhCHHHccCC
Confidence 12235678889999999999554
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=227.61 Aligned_cols=198 Identities=18% Similarity=0.275 Sum_probs=149.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+.++. +|+|+++++++ +..+..
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDS----YLVGDE 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEE----EEECCE
Confidence 35788899999999999999996 5688999999975432 23567889999887 88888888887 667778
Q ss_pred chhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
.++++||+ ++++|.+++. +||.|++++.++.+||+|||+++......
T Consensus 92 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 92 LWVVMEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp EEEEEECC-TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEEEEECC-CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 89999999 8999887752 78999999999999999999998876555
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||..| .++|||||||++|||+||+.||........ .........+.+..+
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~~~~~~~----- 239 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGTPELQNP----- 239 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCSCCCSCG-----
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCCCCCCc-----
Confidence 445566788887 689999999999999999999864321110 000111111222111
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..||+.||++|++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps 263 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGS 263 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred cccCHHHHHHHHHHccCChhHCcC
Confidence 122334668889999999999944
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=232.54 Aligned_cols=201 Identities=18% Similarity=0.247 Sum_probs=149.0
Q ss_pred HHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~ 244 (408)
...++|...+.||+|+||.||+|+.. +|+.||||+++..........+.+..|..++. +|+|+++++++ +..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~----~~~ 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT----FQT 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEE----EEC
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEE----EEe
Confidence 34578999999999999999999984 58899999997532111223456778888875 78998888888 777
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++|+||+ ++|+|..++. +||.|++++.++++||+|||+++..
T Consensus 90 ~~~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 90 KENLFFVMEYL-NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp SSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred CCEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 88899999999 8999987762 7899999999999999999999875
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
..........+||+.| .++|||||||+++||+||+.||..... ......+.......+
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~~i~~~~~~~p- 238 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---------EELFHSIRMDNPFYP- 238 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCC-
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH---------HHHHHHHHhCCCCCC-
Confidence 4444444567888888 689999999999999999999864321 111111111111111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..|++.||++|++.
T Consensus 239 -~---~~s~~~~~li~~lL~~dp~~R~~~ 263 (345)
T 1xjd_A 239 -R---WLEKEAKDLLVKLFVREPEKRLGV 263 (345)
T ss_dssp -T---TSCHHHHHHHHHHSCSSGGGSBTT
T ss_pred -c---ccCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 112345678889999999999543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-28 Score=230.16 Aligned_cols=196 Identities=19% Similarity=0.258 Sum_probs=148.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +|+.||+|+++..........+.+.+|++++. +|+|++++.++ +......
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~----~~~~~~~ 80 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA----FQTHDRL 80 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEE----EECSSEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEE----EEeCCEE
Confidence 57999999999999999999984 58999999997532212234567889999987 78888888877 7777889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|..++. +||.|++++.++++||+|||+++......
T Consensus 81 ~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 81 CFVMEYA-NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEEEECC-TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999 8888876662 78999999999999999999998754444
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......+||+.| .++|||||||+++||+||+.||..... ......+....+..+ .
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~~i~~~~~~~p--~-- 226 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ERLFELILMEEIRFP--R-- 226 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCC--T--
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH---------HHHHHHHHcCCCCCC--C--
Confidence 444556788877 689999999999999999999863211 111112222222111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....+.+++..|++.||++|+
T Consensus 227 -~~s~~~~~li~~lL~~dP~~R~ 248 (337)
T 1o6l_A 227 -TLSPEAKSLLAGLLKKDPKQRL 248 (337)
T ss_dssp -TSCHHHHHHHHHHTCSSTTTST
T ss_pred -CCCHHHHHHHHHHhhcCHHHhc
Confidence 1123456788899999999996
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=224.47 Aligned_cols=201 Identities=20% Similarity=0.298 Sum_probs=145.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|...+.||+|+||.||+|+. .+++.||+|.+...........+.|.+|+.++. +|+|+++++++ +..+...
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~----~~~~~~~ 86 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV----DEEDDCY 86 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEE----EECSSEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEe----eeeCCeE
Confidence 4688889999999999999997 468899999997654444455678999999987 88888888887 7788889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. +||.|++++.++++||+|||+++......
T Consensus 87 ~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 87 YLVMEYI-EGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEEEECC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEEEeCC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999 8888887652 78999999999999999999998765332
Q ss_pred Ce-eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 296 SN-LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 296 ~~-~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.. .....||+.| .++|||||||++|||+||+.||....... .....+...........
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~~~ 236 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS---------IAIKHIQDSVPNVTTDV 236 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH---------HHHHHHSSCCCCHHHHS
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHhhccCCCcchhc
Confidence 22 2345788888 67999999999999999999996432111 01111111111100001
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.......+.+++..|++.||++|+
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~ 260 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRY 260 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred ccCCCHHHHHHHHHHhcCCHhHcc
Confidence 112234577888999999999994
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-28 Score=226.70 Aligned_cols=196 Identities=19% Similarity=0.295 Sum_probs=148.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+. .+|+.||||++.... .+....+.+.+|++++. +|+|+++++++ +.....
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~----~~~~~~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEV----IETEKT 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EECSSE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEECCE
Confidence 35788999999999999999998 679999999997533 23345667889999987 88888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++|+||+ ++++|.+++. +||.|++++.++.+||+|||+++.....
T Consensus 89 ~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 89 LYLIMEYA-SGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEEEECCC-TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEEEECC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999 8888887762 7899999999999999999999876543
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
. .....+||++| .++|||||||+++||+||+.||+.... ......+.......+.
T Consensus 168 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~~~~p~-- 235 (328)
T 3fe3_A 168 G-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------KELRERVLRGKYRIPF-- 235 (328)
T ss_dssp C-GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCCT--
T ss_pred C-ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCCC--
Confidence 2 23456788877 479999999999999999999974321 1111122222222111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 236 ---~~s~~~~~li~~~L~~dP~~R~t 258 (328)
T 3fe3_A 236 ---YMSTDCENLLKRFLVLNPIKRGT 258 (328)
T ss_dssp ---TSCHHHHHHHHHHCCSSTTTSCC
T ss_pred ---CCCHHHHHHHHHHCCCChhHCcC
Confidence 11234567888999999999943
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=228.66 Aligned_cols=200 Identities=23% Similarity=0.264 Sum_probs=138.6
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+....++|+..+.||+|+||+||+|+. +|+.||||++.... ......+.|.+|++++. +|+|+++++++ +..
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~ 105 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMGA----VTQ 105 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCC-CSHHHHHHHHHHHHHHHHCCCTTBCCEEEE----ECS
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEE
Confidence 333456899999999999999999988 68889999997532 23344567999999987 88998888888 777
Q ss_pred Cccchhhhhhcccchhhhhhhc--------------------------------------cCccccccccCCceEEeecc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI--------------------------------------MKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~~~~~ki~DfG 286 (408)
....++++||+ ++|+|.+++. +||.|++++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 106 PPNLSIVTEYL-SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp TTCCEEEEECC-TTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred CCceEEEEecC-CCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 88889999999 8888766541 67889999999999999999
Q ss_pred cccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc--cC
Q 037624 287 MTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV--LD 352 (408)
Q Consensus 287 la~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~d 352 (408)
+++.............||..| .++|||||||++|||+||+.||...... .....+ ..
T Consensus 185 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---------~~~~~~~~~~ 255 (309)
T 3p86_A 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---------QVVAAVGFKC 255 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---------HHHHHHHHSC
T ss_pred CCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhcC
Confidence 998754443333456788888 6899999999999999999998643211 011111 11
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+ ......+.+++..||+.+|++|++
T Consensus 256 ~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps 285 (309)
T 3p86_A 256 KRLEIP-----RNLNPQVAAIIEGCWTNEPWKRPS 285 (309)
T ss_dssp CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCCC-----ccCCHHHHHHHHHHccCChhhCcC
Confidence 111111 112234678889999999999944
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-28 Score=229.54 Aligned_cols=199 Identities=18% Similarity=0.230 Sum_probs=141.8
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|+..+.||+|+||.||+|+.. +++.||||++...........+.+.+|..++. +|+|++++.++ +....
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~----~~~~~ 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS----FQTAD 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE----EECSS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE----EEeCC
Confidence 357999999999999999999985 48899999997654433344566778887743 78888888777 77788
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++|+||+ ++|+|..++. +||.|++++.++++||+|||+++....
T Consensus 113 ~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 113 KLYFVLDYI-NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 899999999 8999877662 789999999999999999999987544
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
........+||+.| .++|||||||++|||+||+.||..... ......++...+.-+ .
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---------~~~~~~i~~~~~~~~--~ 260 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---------AEMYDNILNKPLQLK--P 260 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH---------HHHHHHHHHSCCCCC--S
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---------HHHHHHHHhcccCCC--C
Confidence 44445567899988 689999999999999999999864221 111222332222211 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..|++.||++|++.
T Consensus 261 ---~~~~~~~~li~~lL~~dp~~R~~~ 284 (373)
T 2r5t_A 261 ---NITNSARHLLEGLLQKDRTKRLGA 284 (373)
T ss_dssp ---SSCHHHHHHHHHHTCSSGGGSTTT
T ss_pred ---CCCHHHHHHHHHHcccCHHhCCCC
Confidence 112245678889999999999543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=221.87 Aligned_cols=197 Identities=18% Similarity=0.258 Sum_probs=144.8
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+.. +++.||+|++.. .+....+.|.+|++++. +|+|+++++++ +..+...
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~ 82 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIGV----LYKDKRL 82 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EEETTEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCcCcccEEEE----EecCCee
Confidence 57888899999999999999984 588999999854 23445678999999997 88888888888 7777888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. +||.|++++.++.+||+|||+++.....
T Consensus 83 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 83 NFITEYI-KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEEEECC-TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EEEEEec-CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999 8888877662 7899999999999999999999876433
Q ss_pred CCee--------------eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhh
Q 037624 295 SSNL--------------TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 295 ~~~~--------------~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
.... ....||+.| .++|||||||++|||+||..|+............ ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----~~~ 237 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL----NVR 237 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB----CHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh----hhh
Confidence 2111 145688887 6899999999999999999997643211110001 111
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...++.... .+...+.+++..||+.||++|++
T Consensus 238 ~~~~~~~~~-------~~~~~l~~li~~~l~~dP~~Rps 269 (310)
T 3s95_A 238 GFLDRYCPP-------NCPPSFFPITVRCCDLDPEKRPS 269 (310)
T ss_dssp HHHHHTCCT-------TCCTTHHHHHHHHTCSSGGGSCC
T ss_pred ccccccCCC-------CCCHHHHHHHHHHccCChhhCcC
Confidence 111111111 11223667889999999999944
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-28 Score=228.47 Aligned_cols=198 Identities=19% Similarity=0.254 Sum_probs=149.6
Q ss_pred HhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|+..+.||+|+||.||+|+... |+.||||+++..........+.+.+|..++. .|++++++.++ +....
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~----~~~~~ 94 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC----FQTMD 94 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEE----EECSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEE----EEcCC
Confidence 4689999999999999999999854 7899999997543222234567889999886 67888887777 67778
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
..++++||+ ++|+|..++. +||.|++++.++++||+|||+++....
T Consensus 95 ~~~lv~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 95 RLYFVMEYV-NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 899999999 8999887762 789999999999999999999987544
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
........+||+.| .++|||||||++|||++|+.||.... .......+....+..+ .
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---------~~~~~~~i~~~~~~~p--~ 242 (353)
T 2i0e_A 174 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---------EDELFQSIMEHNVAYP--K 242 (353)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHHHHHHCCCCCC--T
T ss_pred CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC---------HHHHHHHHHhCCCCCC--C
Confidence 44344567889888 68999999999999999999986421 1111222332222211 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 243 ---~~s~~~~~li~~lL~~dP~~R~~ 265 (353)
T 2i0e_A 243 ---SMSKEAVAICKGLMTKHPGKRLG 265 (353)
T ss_dssp ---TSCHHHHHHHHHHTCSCTTSCTT
T ss_pred ---CCCHHHHHHHHHHhhcCHHHcCC
Confidence 11234667888999999999954
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-28 Score=234.03 Aligned_cols=200 Identities=23% Similarity=0.292 Sum_probs=148.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|++++. +|+|+++++++ +......
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~----~~~~~~~ 90 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYS----FQDEEDM 90 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEE----EEeCCEE
Confidence 57899999999999999999984 58899999986543222334577899999987 78888888877 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|..++. +||.|++++.++++||+|||+++.....
T Consensus 91 ~lv~e~~-~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 91 FMVVDLL-LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp EEEECCC-TTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred EEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 9999999 8999877662 7899999999999999999999876533
Q ss_pred CeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 SNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
......+||+.| .++|||||||++|||+||+.||....... .......+.......+
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------~~~~~~~~~~~~~~~p-- 240 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS------SKEIVHTFETTVVTYP-- 240 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC------HHHHHHHHHHCCCCCC--
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc------HHHHHHHHhhcccCCC--
Confidence 233456677766 47899999999999999999986432110 0011111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..||+.||++|++.
T Consensus 241 ~---~~s~~~~~li~~lL~~dP~~R~s~ 265 (384)
T 4fr4_A 241 S---AWSQEMVSLLKKLLEPNPDQRFSQ 265 (384)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSCCS
T ss_pred C---cCCHHHHHHHHHHhcCCHhHhccc
Confidence 1 112346688889999999999664
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-28 Score=240.32 Aligned_cols=164 Identities=28% Similarity=0.410 Sum_probs=134.6
Q ss_pred cHHHHHHHHhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeE
Q 037624 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMD 239 (408)
Q Consensus 163 ~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~ 239 (408)
.+.++...+++|+..++||+|+||+||+|+... ++.||||++...........+.+.+|+.++. +|+|++++.++
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~-- 142 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA-- 142 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE--
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE--
Confidence 455666678899999999999999999999854 7899999997532222223455888998887 88999988888
Q ss_pred eeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeec
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
+.+....++|+||+ ++|+|..++. +||.|++++.++++||+||
T Consensus 143 --~~~~~~~~lV~Ey~-~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 143 --FQDDNNLYLVMDYY-VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp --EECSSEEEEEECCC-TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred --EeeCCEEEEEEecC-CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcch
Confidence 78888899999999 9999887762 7899999999999999999
Q ss_pred ccccccCCCCCe-eeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 286 GMTMHLYCDSSN-LTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 286 Gla~~~~~~~~~-~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+|+........ .+..+||++| .++|||||||++|||+||+.||..
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 999876544332 2446788888 379999999999999999999964
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-27 Score=219.68 Aligned_cols=153 Identities=21% Similarity=0.296 Sum_probs=121.6
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||+||+|+..+|+.||||++.... ......+.+.+|++++. +|+|+++++++ +..+...+
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~~ 95 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDV----IHSERCLT 95 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEE----ECCSSCEE
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcCCCCEeeeeeE----EccCCEEE
Confidence 5788899999999999999999889999999997532 23334577899999987 88888888888 77788889
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++ ++.+.+. +||.|++++.++.+||+|||+++......
T Consensus 96 lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 96 LVFEFM-EK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp EEEECC-SE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred EEEcCC-CC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 999998 53 4444331 78999999999999999999998875444
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...+...||..| .++|||||||+++||+||+.||..
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 222 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCC
Confidence 444455677776 678999999999999999999864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=223.38 Aligned_cols=205 Identities=19% Similarity=0.228 Sum_probs=140.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+. .+++.||||++......+....+.|.+|++++. +|+|+++++++...........
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788899999999999999997 668899999997654444455678899999987 7888888877733222222345
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. +||.|++++.++.+||+|||+++......
T Consensus 92 ~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 92 YIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp EEEEECC-CEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred EEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 8999999 8888887762 78999999999999999999998764432
Q ss_pred Ce---eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 SN---LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~~---~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.. .....||..| .++|||||||++|||+||+.||...... .............+.
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~---------~~~~~~~~~~~~~~~- 240 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV---------SVAYQHVREDPIPPS- 240 (311)
T ss_dssp -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHCCCCCHH-
T ss_pred cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHhcCCCCCcc-
Confidence 21 2345688888 6899999999999999999998643211 111111111111100
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..||+.||++|++
T Consensus 241 ~~~~~~~~~l~~li~~~l~~dP~~R~~ 267 (311)
T 3ork_A 241 ARHEGLSADLDAVVLKALAKNPENRYQ 267 (311)
T ss_dssp HHSTTCCHHHHHHHHHHTCSSGGGSCS
T ss_pred cccCCCCHHHHHHHHHHHhcCHhhChh
Confidence 111112345678889999999999954
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-28 Score=236.52 Aligned_cols=208 Identities=21% Similarity=0.308 Sum_probs=151.7
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEe
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFM 238 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~ 238 (408)
+.+.++....++|+..+.||+|+||.||+|+.. +|+.||||++...........+.+.+|..++. +|+|++++.++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~- 129 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA- 129 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE-
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE-
Confidence 345566667889999999999999999999984 68999999997532222223456888998886 88888888887
Q ss_pred EeeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEee
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~D 284 (408)
+.+....++|+||+ ++|+|..++. +||.|++++.++++||+|
T Consensus 130 ---~~~~~~~~lVmE~~-~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 130 ---FQDENYLYLVMEYY-VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp ---EECSSEEEEEECCC-CSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred ---EeeCCEEEEEEcCC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEee
Confidence 77888899999999 8999887762 789999999999999999
Q ss_pred cccccccCCCCCe-eeecccCCCC-------------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccccc
Q 037624 285 FGMTMHLYCDSSN-LTLLAGTYGY-------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQN 344 (408)
Q Consensus 285 fGla~~~~~~~~~-~~~~~gt~~y-------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~ 344 (408)
||+++........ ....+||+.| .++|||||||++|||+||+.||......
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------- 276 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--------- 276 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---------
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH---------
Confidence 9999887544332 2345788877 3689999999999999999998643211
Q ss_pred chhhhccCC--CCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 345 IMLLDVLDP--RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 345 ~~~~~~~d~--~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....++.. .+..+ .........+.+++..|+. +|++|+
T Consensus 277 ~~~~~i~~~~~~~~~p--~~~~~~s~~~~dli~~lL~-~p~~Rl 317 (412)
T 2vd5_A 277 ETYGKIVHYKEHLSLP--LVDEGVPEEARDFIQRLLC-PPETRL 317 (412)
T ss_dssp HHHHHHHTHHHHCCCC------CCCHHHHHHHHTTSS-CGGGCT
T ss_pred HHHHHHHhcccCcCCC--ccccCCCHHHHHHHHHHcC-ChhhcC
Confidence 111111110 00000 0001122345678889999 999995
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=244.74 Aligned_cols=200 Identities=19% Similarity=0.241 Sum_probs=152.5
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
..++|+..+.||+|+||.||+|+.. +++.||||+++..........+.+..|..++. .|++++.+..+ +...
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~----~~~~ 414 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC----FQTM 414 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE----CBCS
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE----EEeC
Confidence 3468999999999999999999984 58899999997532222234567888999886 67777777777 6777
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
...++|+||+ ++|+|..++. +||.|++++.++++||+|||+|+...
T Consensus 415 ~~~~lV~E~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 415 DRLYFVMEYV-NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp SEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred CEEEEEEeCc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 8889999999 9999987762 79999999999999999999999754
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.........+||+.| .++|||||||++|||+||+.||.... .......++...+..+.
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~---------~~~~~~~i~~~~~~~p~- 563 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---------EDELFQSIMEHNVAYPK- 563 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHHHHHSSCCCCCT-
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC---------HHHHHHHHHhCCCCCCc-
Confidence 444445667899999 68999999999999999999996421 12223344443333221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..|++.||++|++.
T Consensus 564 ----~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 564 ----SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ----TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ----cCCHHHHHHHHHHccCCHHHCCCC
Confidence 122346678889999999999543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-27 Score=218.42 Aligned_cols=207 Identities=17% Similarity=0.321 Sum_probs=142.0
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|...+.||+|+||+||+|+. +|+.||||++... ..+.+..|.+++. +|+|+++++++.........
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46788999999999999999998 6889999998642 2355666666553 78888888777333233345
Q ss_pred cchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCCceEEeecc
Q 037624 247 CFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~~~ki~DfG 286 (408)
..++++||+ ++|+|.+++. +||.|++++.++++||+|||
T Consensus 80 ~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 158 (301)
T 3q4u_A 80 QLWLITHYH-EMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158 (301)
T ss_dssp EEEEEECCC-TTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred eeEEehhhc-cCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC
Confidence 678999999 8888876541 57889999999999999999
Q ss_pred cccccCCCCCee----eecccCCCC------------------cccchhhhhHHHHHHHhC----------CCCCccccc
Q 037624 287 MTMHLYCDSSNL----TLLAGTYGY------------------EKCDVYSFGVVALEILMG----------RQPGELLSS 334 (408)
Q Consensus 287 la~~~~~~~~~~----~~~~gt~~y------------------~k~DVySfGvvl~Elltg----------~~p~~~~~~ 334 (408)
+++......... ....||..| .++|||||||++|||+|| +.||.....
T Consensus 159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~ 238 (301)
T 3q4u_A 159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238 (301)
T ss_dssp TCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC
Confidence 998765443322 234688877 278999999999999999 666643211
Q ss_pred ccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 335 LSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 335 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..................+.+.. ..........+.+++..||+.||++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps 289 (301)
T 3q4u_A 239 NDPSFEDMRKVVCVDQQRPNIPN--RWFSDPTLTSLAKLMKECWYQNPSARLT 289 (301)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCG--GGGGSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred CCcchhhhhHHHhccCCCCCCCh--hhccCccHHHHHHHHHHHhhcChhhCCC
Confidence 11100000000001111222221 1223456677889999999999999955
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-27 Score=221.08 Aligned_cols=213 Identities=16% Similarity=0.209 Sum_probs=145.4
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|...+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++. +|+|++++++++..........
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 357888999999999999999985 7899999996422 23445667888876 7888888888833222223456
Q ss_pred hhhhhhcccchhhhhhhc------------------------------------------cCccccccccCCceEEeecc
Q 037624 249 WFMNTWRGEACSVFCTMI------------------------------------------MKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~------------------------------------------~k~~~~~l~~~~~~ki~DfG 286 (408)
++++||+ ++|+|.+++. +||.|++++.++.+||+|||
T Consensus 98 ~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 98 WLITAFH-EKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EEEEECC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEecC-CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 8999999 8888876642 57889999999999999999
Q ss_pred cccccCCCCCe--eeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCC--c----cc
Q 037624 287 MTMHLYCDSSN--LTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS--S----SS 341 (408)
Q Consensus 287 la~~~~~~~~~--~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~--~----~~ 341 (408)
+++........ .....||..| .++|||||||++|||+||+.||......... . ..
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99876543322 2335678777 3679999999999999999998643211100 0 00
Q ss_pred cccchhhh-ccCCCCCCccc--hhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 342 DQNIMLLD-VLDPRLSPPVD--RMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 342 ~~~~~~~~-~~d~~l~~~~~--~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
.....+.+ +......+... .....+...+.+++..||+.||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (322)
T 3soc_A 257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAG 307 (322)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHH
Confidence 00111111 11222221111 11224556688999999999999995543
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-28 Score=236.78 Aligned_cols=163 Identities=24% Similarity=0.351 Sum_probs=132.8
Q ss_pred HHHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEe
Q 037624 164 FGDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDF 240 (408)
Q Consensus 164 ~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~ 240 (408)
+.++....++|...+.||+|+||+||+|+.. +++.||+|++...........+.+.+|+.++. +|+|+++++++
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~--- 137 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA--- 137 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEE---
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE---
Confidence 3455566789999999999999999999985 58899999996532222223456888998887 88998888888
Q ss_pred eecCCccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
+.+....++|+||+ ++|+|..++. +||.|++++.++++||+|||+|
T Consensus 138 -~~~~~~~~lV~E~~-~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 138 -FQDDRYLYMVMEYM-PGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp -EECSSEEEEEECCC-TTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred -EEECCEEEEEEeCC-CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 77888899999999 9999987662 7999999999999999999999
Q ss_pred cccCCCCC-eeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSS-NLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~-~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+....... .....+||+.| .++|||||||++|||+||+.||..
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 87654432 22456788887 379999999999999999999964
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-28 Score=231.75 Aligned_cols=198 Identities=18% Similarity=0.239 Sum_probs=145.0
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+.. +++.||||.++.. ......+.|.+|++++. +|+|+++++++ +.....
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~~ 186 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGV----CTQKQP 186 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCCCTTBCCEEEE----ECSSSS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEE----EecCCC
Confidence 457888999999999999999985 6889999998742 22334567899999997 88888888888 788888
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++|+||+ ++|+|.+++. ++|.|+++++++.+||+|||+++....
T Consensus 187 ~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 187 IYIVMELV-QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CEEEEECC-TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cEEEEEcC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999 8888877662 789999999999999999999986533
Q ss_pred CCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 294 DSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 294 ~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... ....++..| .++|||||||++|||+| |+.||...... ...+.+......+
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----------~~~~~~~~~~~~~ 335 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----------QTREFVEKGGRLP 335 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----------HHHHHHHTTCCCC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----------HHHHHHHcCCCCC
Confidence 21111 111234445 68999999999999999 99998643211 1112221111111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. +..+...+.+++..||+.||++|++.
T Consensus 336 ~---~~~~~~~l~~li~~cl~~dP~~Rps~ 362 (377)
T 3cbl_A 336 C---PELCPDAVFRLMEQCWAYEPGQRPSF 362 (377)
T ss_dssp C---CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred C---CCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 1 11223456788899999999999543
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-27 Score=222.98 Aligned_cols=201 Identities=16% Similarity=0.186 Sum_probs=149.1
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC---cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE---PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.+.|...+.||+|+||.||+|+.. +|+.||||.+....... ....+.+.+|+.++. +|+|+++++++ +..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~----~~~ 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDV----YEN 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEE----EEC
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEE----EEe
Confidence 357888999999999999999984 58899999997643221 123567999999997 78888888887 777
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC----ceEEeeccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL----EAFVADFGM 287 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~----~~ki~DfGl 287 (408)
....++++||+ ++|+|.+++. +||.|++++.++ .+||+|||+
T Consensus 87 ~~~~~lv~e~~-~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 87 RTDVVLILELV-SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp SSEEEEEEECC-CSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred CCEEEEEEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 88899999999 8999987762 789999988665 799999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
++...... ......||+.| .++|||||||++|||++|+.||.... .......+.....
T Consensus 166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~---------~~~~~~~i~~~~~ 235 (361)
T 2yab_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---------KQETLANITAVSY 235 (361)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS---------HHHHHHHHHTTCC
T ss_pred ceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---------HHHHHHHHHhcCC
Confidence 98765432 23446788887 68999999999999999999986421 1111222322222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. .........+.+++..|++.||++|++
T Consensus 236 ~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t 266 (361)
T 2yab_A 236 DFDE-EFFSQTSELAKDFIRKLLVKETRKRLT 266 (361)
T ss_dssp CCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCCc-hhccCCCHHHHHHHHHHCCCChhHCcC
Confidence 2110 111222345668889999999999954
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=230.76 Aligned_cols=202 Identities=16% Similarity=0.203 Sum_probs=148.1
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
-+++|...+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+.+|++++. +|+|+++++++ +..+.
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~----~~~~~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDS----ISEEG 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS-CHHHHHHHHHHHHHHHHHCCBTTBCCEEEE----EECSS
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCcCCCeEEEE----EEECC
Confidence 457899999999999999999987 568899999997532 22234567899999987 88888888887 77888
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccc---cCCceEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL---RELEAFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~---~~~~~ki~DfGla~~ 290 (408)
..++++||+ ++|+|.+.+. +||.|++++ +++.+||+|||+++.
T Consensus 84 ~~~lv~E~~-~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 84 HHYLIFDLV-TGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EEEEEECCC-BCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEEEEEeC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 899999999 8888876652 789999998 467899999999988
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
............||++| .++||||+||++|||++|+.||..... ......+.......+
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~---------~~~~~~i~~~~~~~~ 233 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ---------HRLYQQIKAGAYDFP 233 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHHHHHTCCCCC
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH---------HHHHHHHHhCCCCCC
Confidence 76554444567888888 689999999999999999999863211 111111111111110
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .........+.+++..|++.||++|++
T Consensus 234 ~-~~~~~~s~~~~~li~~~L~~dP~~Rpt 261 (444)
T 3soa_A 234 S-PEWDTVTPEAKDLINKMLTINPSKRIT 261 (444)
T ss_dssp T-TTTTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred c-cccccCCHHHHHHHHHHcCCChhHCCC
Confidence 0 001112234667888999999999954
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-27 Score=225.86 Aligned_cols=194 Identities=18% Similarity=0.183 Sum_probs=147.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +|+.||||++...........+.+.+|++++. .|+|++++.++ +......
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~ 116 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS----FKDNSNL 116 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EEcCCEE
Confidence 57899999999999999999984 68899999997543222234567889999997 78888877777 6777889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|++++.++++||+|||+++.....
T Consensus 117 ~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 117 YMVMEYV-AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EEEEECC-TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EEEEcCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999 8889887762 7899999999999999999999876432
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....+||+.| .++|||||||+++||+||+.||..... ......+....+..+ .
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~~i~~~~~~~p--~-- 259 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---------IQIYEKIVSGKVRFP--S-- 259 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCC--T--
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH---------HHHHHHHHcCCCCCC--C--
Confidence 2345788877 689999999999999999999864221 111222222222211 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 260 -~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 260 -HFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp -TCCHHHHHHHHHHSCSCTTTCTT
T ss_pred -CCCHHHHHHHHHHhhcCHHhccC
Confidence 11234667888999999999955
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=234.20 Aligned_cols=197 Identities=18% Similarity=0.239 Sum_probs=138.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|+. .+|+.||||++.............+.+|++++. +|+|++++.++ +.....
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~----~~~~~~ 222 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS----FQTHDR 222 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEE----EEETTE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEE----EeeCCE
Confidence 46799999999999999999997 468899999997543233334567889999987 88888888887 777788
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++|+||+ ++|+|..++. +||.|++++.++++||+|||+++....
T Consensus 223 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 223 LCFVMEYA-NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EEEEECCC-SSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEEEEeeC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 89999999 8888866552 789999999999999999999987554
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
........+||++| .++|||||||+++||+||+.||..... ......+.......+ .
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---------~~~~~~i~~~~~~~p--~ 370 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------EKLFELILMEEIRFP--R 370 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCC--T
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---------HHHHHHHHhCCCCCC--c
Confidence 44445567899888 689999999999999999999864321 111122222222111 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....+.+++..||+.||++|+
T Consensus 371 ---~~~~~~~~li~~~L~~dP~~R~ 392 (446)
T 4ejn_A 371 ---TLGPEAKSLLSGLLKKDPKQRL 392 (446)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTST
T ss_pred ---cCCHHHHHHHHHHcccCHHHhC
Confidence 1123466788899999999996
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=220.93 Aligned_cols=193 Identities=20% Similarity=0.216 Sum_probs=147.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. +|+.||+|+++..........+.+.+|+.++. +|+|+++++++ +......
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~----~~~~~~~ 81 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGT----FQDAQQI 81 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEE----EECSSEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEE----EEeCCEE
Confidence 57899999999999999999984 68999999997532222234567888998886 78888888887 7778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|++++.++++||+|||+++.....
T Consensus 82 ~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 82 FMIMDYI-EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp EEEECCC-CSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EEEEeCC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999 8888887762 7899999999999999999999876432
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....+||+.| .++|||||||+++||+||+.||..... ......+....+..+ .
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~~~~p--~-- 224 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT---------MKTYEKILNAELRFP--P-- 224 (318)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHHHHCCCCCC--T--
T ss_pred --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCC--C--
Confidence 2346788888 689999999999999999999864221 111223333222211 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....+.+++..|++.||++|+
T Consensus 225 -~~~~~~~~li~~lL~~dp~~R~ 246 (318)
T 1fot_A 225 -FFNEDVKDLLSRLITRDLSQRL 246 (318)
T ss_dssp -TSCHHHHHHHHHHTCSCTTTCT
T ss_pred -CCCHHHHHHHHHHhccCHHHcC
Confidence 1122456788899999999995
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-28 Score=230.91 Aligned_cols=201 Identities=18% Similarity=0.238 Sum_probs=136.7
Q ss_pred hhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|+.. ++..||||+++... .....+.|.+|++++. +|+|+++++++ +...
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~ 118 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGV----VTKS 118 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEE----ECSS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EeeC
Confidence 47888999999999999999874 57789999997532 3345678999999997 88998888888 7888
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. +||.|++++.++.+||+|||+++..
T Consensus 119 ~~~~lv~e~~-~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 119 KPVMIVTEYM-ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp SSCEEEEECC-TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred CceEEEEeCC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 8899999999 8889887762 7889999999999999999999877
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....+|..| .++|||||||++|||+| |+.||..... ..+.+.++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~----------~~~~~~i~~~~ 267 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIKAVDEGY 267 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH----------HHHHHHHHTTE
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH----------HHHHHHHHcCC
Confidence 5432211 122345566 68999999999999998 9999863211 11112222111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
..+. ...+...+.+++..||+.+|++| |.+++..
T Consensus 268 ~~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 268 RLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp ECCC---CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCC---CccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 1110 11234457788999999999999 4444433
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=221.40 Aligned_cols=197 Identities=17% Similarity=0.172 Sum_probs=148.7
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+.. +++.||+|.+... ......+.+|++++. +|+|+++++++ +.....
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~----~~~~~~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHES----FESMEE 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEE----EEETTE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEE----EecCCE
Confidence 367888999999999999999984 5889999998642 234567889999987 88888888887 677788
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCcccccccc--CCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLR--ELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~--~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++++|.+++. +||.|++++. ++.+||+|||+++..
T Consensus 76 ~~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 76 LVMIFEFI-SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp EEEEECCC-CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEEEEEeC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999 8888877662 7888998885 789999999999887
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.... ......||+.| .++|||||||+++||+||+.||.... ....+..+.......+.
T Consensus 155 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 155 KPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET---------NQQIIENIMNAEYTFDE 224 (321)
T ss_dssp CTTC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS---------HHHHHHHHHHTCCCCCH
T ss_pred CCCC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC---------HHHHHHHHHcCCCCCCh
Confidence 5433 34556788877 68999999999999999999986421 11122233333322211
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 225 -~~~~~~s~~~~~li~~~L~~dp~~Rpt 251 (321)
T 1tki_A 225 -EAFKEISIEAMDFVDRLLVKERKSRMT 251 (321)
T ss_dssp -HHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred -hhhccCCHHHHHHHHHHcCCChhHCcC
Confidence 111122345678889999999999955
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=224.96 Aligned_cols=202 Identities=19% Similarity=0.225 Sum_probs=144.4
Q ss_pred hhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|...+.||+|+||.||+|+.. .+..||||+++.. ......+.|.+|++++. +|+|+++++++ +..+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~ 122 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG--YTERQRRDFLSEASIMGQFDHPNIIRLEGV----VTRG 122 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE----ECGG
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEE----EEeC
Confidence 46777899999999999999984 3456999999753 23345678999999997 88888888887 7778
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++|+||+ ++++|.+++. +||.|++++.++.+||+|||+++..
T Consensus 123 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 123 RLAMIVTEYM-ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp GCCEEEEECC-TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred CccEEEeeCC-CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 8889999999 8889887762 7899999999999999999999877
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....||..| .++|||||||++|||+| |+.||..... ......+... .
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~---------~~~~~~~~~~-~ 271 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---------RDVISSVEEG-Y 271 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH---------HHHHHHHHTT-C
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH---------HHHHHHHHcC-C
Confidence 5432221 223455566 68999999999999999 9999864211 1111111111 1
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcC--CCccccc
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPM--QKPFHEI 393 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm--~~~~~~~ 393 (408)
..+. .......+.+++..||+.||++|+ .+++..+
T Consensus 272 ~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L 308 (325)
T 3kul_A 272 RLPA---PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308 (325)
T ss_dssp CCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC---CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1100 112234577888999999999994 4444433
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-27 Score=219.61 Aligned_cols=199 Identities=18% Similarity=0.220 Sum_probs=138.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCC-----------------------cchhhHHHHHHHHhc-
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEE-----------------------PASTRSFQNEVDILY- 226 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~- 226 (408)
++|...+.||+|+||.||+|+. .+++.||||++....... ....+.+.+|++++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5788899999999999999997 458899999997532111 112467899999997
Q ss_pred -ccCCcceeeeEeEeeecC--Cccchhhhhhcccchhhhhhh--------------------------------ccCccc
Q 037624 227 -PKYDIETLLSFMDFVCIK--DACFWFMNTWRGEACSVFCTM--------------------------------IMKPLS 271 (408)
Q Consensus 227 -~~~n~~~l~~~~~~~~~~--~~~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~ 271 (408)
+|+|+++++++ +.. ....++++||+ ++++|...+ ++||.|
T Consensus 93 l~h~~iv~~~~~----~~~~~~~~~~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N 167 (298)
T 2zv2_A 93 LDHPNVVKLVEV----LDDPNEDHLYMVFELV-NQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN 167 (298)
T ss_dssp CCCTTBCCEEEE----EECSSSSEEEEEEECC-TTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred CCCCCCCeEEEE----EEcCCCCEEEEEEecC-CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence 78888887777 443 56788999999 777766543 178999
Q ss_pred cccccCCceEEeecccccccCCCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCccccccc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLS 336 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~ 336 (408)
++++.++++||+|||+++.............||..| .++|||||||++|||+||+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 999999999999999998876544444456677777 35799999999999999999986432110
Q ss_pred CCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.......+... .....+.+++..||+.||++|++
T Consensus 248 ---------~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~R~s 286 (298)
T 2zv2_A 248 ---------LHSKIKSQALEFPDQP---DIAEDLKDLITRMLDKNPESRIV 286 (298)
T ss_dssp ---------HHHHHHHCCCCCCSSS---CCCHHHHHHHHHHTCSCTTTSCC
T ss_pred ---------HHHHHhcccCCCCCcc---ccCHHHHHHHHHHhhcChhhCCC
Confidence 0111111111110000 11234668889999999999955
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.94 E-value=8e-27 Score=222.63 Aligned_cols=201 Identities=17% Similarity=0.234 Sum_probs=147.9
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..++|...+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|++++. +|+|+++++++ +....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~----~~~~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDS----IQEES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EECSS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EEeCC
Confidence 4578999999999999999999984 58899999997533 22334567899999987 88888888887 77788
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccC---CceEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRE---LEAFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~---~~~ki~DfGla~~ 290 (408)
..++++||+ ++|+|.+++. +||.|++++.+ +.+||+|||+++.
T Consensus 102 ~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 102 FHYLVFDLV-TGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EEEEEECCC-CSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEEEEEecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 889999999 8888876552 78999999754 4699999999987
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... ......||++| .++|||||||++|||+||+.||..... ......+.......+
T Consensus 181 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~---------~~~~~~i~~~~~~~~ 250 (362)
T 2bdw_A 181 VNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---------HRLYAQIKAGAYDYP 250 (362)
T ss_dssp CTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHTCCCCC
T ss_pred ecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHhCCCCCC
Confidence 65332 23456788888 689999999999999999999864211 111111111111111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .........+.+++..|++.||++|++
T Consensus 251 ~-~~~~~~~~~~~~li~~~L~~dP~~R~t 278 (362)
T 2bdw_A 251 S-PEWDTVTPEAKSLIDSMLTVNPKKRIT 278 (362)
T ss_dssp T-TGGGGSCHHHHHHHHHHSCSSGGGSCC
T ss_pred c-ccccCCCHHHHHHHHHHcCCChhhCcC
Confidence 0 111122345668889999999999954
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-28 Score=239.78 Aligned_cols=201 Identities=19% Similarity=0.233 Sum_probs=150.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|++++. +|+|++++.++ +......
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~----~~~~~~l 260 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA----FETKTDL 260 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE----EECSSEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEE----EeeCCEE
Confidence 67888899999999999999984 58999999997543222234567889999987 88888888777 6777888
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++|+||+ ++|+|..++. +||.|++++.++++||+|||+++..
T Consensus 261 ~lVmE~~-~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 261 CLVMTIM-NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EEEECCC-TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEec-cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999 8888876541 7899999999999999999999987
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
..........+||+.| .++|||||||++|||+||+.||....... ........+.......+
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-----~~~~~~~~i~~~~~~~p- 413 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-----ENKELKQRVLEQAVTYP- 413 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-----CHHHHHHHHHHCCCCCC-
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-----hHHHHHHHHhhcccCCC-
Confidence 6544444556899988 68999999999999999999996432110 01111122222222211
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++..|++.||++|++
T Consensus 414 -~---~~s~~~~~li~~lL~~dP~~R~~ 437 (543)
T 3c4z_A 414 -D---KFSPASKDFCEALLQKDPEKRLG 437 (543)
T ss_dssp -T---TSCHHHHHHHHHHSCSSGGGSCC
T ss_pred -c---ccCHHHHHHHHHhccCCHhHCCC
Confidence 1 11234567888999999999954
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-27 Score=220.17 Aligned_cols=198 Identities=19% Similarity=0.251 Sum_probs=143.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.++. +|+|+++++++ +..+...
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~----~~~~~~~ 80 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGH----RREGNIQ 80 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEE----EECSSEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEE----EecCCeE
Confidence 57889999999999999999985 688999999865322 123467889999887 88888888887 7788888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. +||.|++++.++.+||+|||+++......
T Consensus 81 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 81 YLFLEYC-SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp EEEEECC-TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEEEEcC-CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 9999999 8888887762 78999999999999999999998764332
Q ss_pred C--eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 S--NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~--~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
. ......||..| .++|||||||+++||+||+.||....... .............+
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~~~~~~~~~~~-- 229 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--------QEYSDWKEKKTYLN-- 229 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS--------HHHHHHHTTCTTST--
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH--------HHHHHHhcccccCC--
Confidence 1 12345788777 47999999999999999999986432110 01111111111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..|++.||++|++
T Consensus 230 -~~~~~~~~~~~li~~~L~~dP~~R~t 255 (323)
T 3tki_A 230 -PWKKIDSAPLALLHKILVENPSARIT 255 (323)
T ss_dssp -TGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred -ccccCCHHHHHHHHHHccCChhhCcC
Confidence 01122334567889999999999944
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=221.37 Aligned_cols=198 Identities=20% Similarity=0.280 Sum_probs=137.3
Q ss_pred HhhcccceeecccceeEEEEEEe----CCCcEEEEEecccccCC-CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL----TSSKVIALKKLHHWENE-EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
.++|+..+.||+|+||.||+|+. .+|+.||+|+++..... .......+.+|++++. +|+|+++++++ +.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~ 91 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA----FQ 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE----EE
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE----EE
Confidence 35799999999999999999997 46889999999754221 1223456788999887 88888888887 77
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
.....++++||+ ++++|..++. +||.|++++.++++||+|||+++.
T Consensus 92 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 92 TGGKLYLILEYL-SGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CSSCEEEEEECC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred cCCEEEEEEeCC-CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 788899999999 8888876652 789999999999999999999986
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
............||..| .++|||||||++|||+||+.||..... ......+.......+
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR---------KKTIDKILKCKLNLP 241 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHHHHHTCCCCC
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHhCCCCCC
Confidence 54443334456788888 689999999999999999999864321 111222222222111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++..|++.||++|++
T Consensus 242 --~---~~~~~~~~li~~~L~~dp~~R~~ 265 (327)
T 3a62_A 242 --P---YLTQEARDLLKKLLKRNAASRLG 265 (327)
T ss_dssp --T---TSCHHHHHHHHHHSCSCGGGSTT
T ss_pred --C---CCCHHHHHHHHHHHhcCHhhccC
Confidence 1 11234567888999999999953
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-28 Score=235.93 Aligned_cols=198 Identities=18% Similarity=0.275 Sum_probs=145.3
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+....++|...+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++. +|+|++++.++ +.
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~----~~- 253 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAV----VT- 253 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEE----EC-
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEE----Ee-
Confidence 344567899999999999999999999888899999997532 24678999999997 88888888776 54
Q ss_pred Cccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
....++++||+ ++|+|.+++. +||.|++++.++.+||+|||+++
T Consensus 254 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 332 (454)
T 1qcf_A 254 KEPIYIITEFM-AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332 (454)
T ss_dssp SSSCEEEECCC-TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred CCccEEEEeec-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence 55678999999 8888887762 78999999999999999999998
Q ss_pred ccCCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 290 HLYCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 290 ~~~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
........ .....+|..| .++|||||||++|||+| |+.||...... . +...+....
T Consensus 333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---------~-~~~~i~~~~ 402 (454)
T 1qcf_A 333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---------E-VIRALERGY 402 (454)
T ss_dssp GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---------H-HHHHHHHTC
T ss_pred EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---------H-HHHHHHcCC
Confidence 76432111 1222344445 68999999999999999 99998643211 1 111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. +..+...+.+++..||+.||++|++
T Consensus 403 ~~~~---~~~~~~~l~~li~~cl~~dp~~RPt 431 (454)
T 1qcf_A 403 RMPR---PENCPEELYNIMMRCWKNRPEERPT 431 (454)
T ss_dssp CCCC---CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCC---CCCCCHHHHHHHHHHccCChhHCcC
Confidence 1110 1123445778899999999999944
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-27 Score=231.65 Aligned_cols=206 Identities=17% Similarity=0.242 Sum_probs=146.7
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC-cc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD-AC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~-~~ 247 (408)
.++|...+.||+|+||.||+|... |+.||||.++... ..+.|.+|++++. +|+|+++++++ +... ..
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~~~ 261 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGV----IVEEKGG 261 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEE----EECTTSC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEE----EEcCCCc
Confidence 467888999999999999999985 7799999997532 3578999999997 78888888777 5544 46
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.++++||+ ++|+|.+++. ++|.|+++++++.+||+|||+++...
T Consensus 262 ~~iv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 262 LYIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEEEECC-TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred eEEEEEec-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 88999999 8888877662 78889999999999999999998653
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
... ....+|..| .++|||||||++|||+| |+.||....... ....+.. ..+.+.
T Consensus 341 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---------~~~~i~~-~~~~~~ 407 (450)
T 1k9a_A 341 STQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------VVPRVEK-GYKMDA 407 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---------HHHHHHT-TCCCCC
T ss_pred ccc---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---------HHHHHHc-CCCCCC
Confidence 221 223456666 68999999999999999 999986432111 1111111 111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHhhhcc
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRNQEM 403 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~~~~~ 403 (408)
+..+...+.+++..||+.||++|++.......++.+...++
T Consensus 408 ---p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~l 448 (450)
T 1k9a_A 408 ---PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448 (450)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred ---CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhhc
Confidence 11234457788899999999999554333334455554443
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.9e-27 Score=218.77 Aligned_cols=196 Identities=17% Similarity=0.195 Sum_probs=132.0
Q ss_pred eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 178 YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.++. .|+|+++++++ +......++++|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~----~~~~~~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEV----FHDQLHTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEE----EECSSEEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEE----EEcCCEEEEEEE
Confidence 78999999999999984 5889999999642 2466788888886 48999988888 778888899999
Q ss_pred hcccchhhhhhhc---------------------------------cCccccccccCC---ceEEeecccccccCCCCCe
Q 037624 254 WRGEACSVFCTMI---------------------------------MKPLSWIGLREL---EAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 254 ~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~---~~ki~DfGla~~~~~~~~~ 297 (408)
|+ ++|+|.+++. +||.|++++.++ .+||+|||+++........
T Consensus 87 ~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 87 LL-NGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp CC-CSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred cc-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 99 8889887662 788999997554 8999999999876554444
Q ss_pred eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHH
Q 037624 298 LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365 (408)
Q Consensus 298 ~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 365 (408)
.....||..| .++|||||||+++||+||+.||........ ..........+.......+. .....
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~~i~~~~~~~~~-~~~~~ 242 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT--CTSAVEIMKKIKKGDFSFEG-EAWKN 242 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCCHHHHHHHHTTTCCCCCS-HHHHT
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--cccHHHHHHHHHcCCCCCCc-ccccC
Confidence 4556778777 688999999999999999999974322111 00111112233333322211 22223
Q ss_pred HHHHHHHHHHhhccCCCCCcCC
Q 037624 366 DIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 366 ~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..|++.||++|++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt 264 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLK 264 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCC
T ss_pred CCHHHHHHHHHHCCCChhHCCC
Confidence 3456778889999999999933
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=218.15 Aligned_cols=201 Identities=18% Similarity=0.222 Sum_probs=148.1
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC---cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE---PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.+.|...+.||+|+||.||+|+.. +|+.||||.+....... ....+.+.+|++++. +|+|+++++++ +..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~ 85 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV----YEN 85 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE----EEC
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEE----EEe
Confidence 467899999999999999999984 58899999997643221 124577999999987 88888888888 777
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC----ceEEeeccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL----EAFVADFGM 287 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~----~~ki~DfGl 287 (408)
....++++||+ ++++|.+++. ++|.|++++.++ .+||+|||+
T Consensus 86 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 86 KTDVILILELV-AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp SSEEEEEEECC-CSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred CCEEEEEEEcC-CCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 88899999999 8889887762 788999998776 899999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
++...... ......||+.| .++|||||||+++||+||+.||..... ...+..+.....
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~~~~~~~ 234 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLANVSAVNY 234 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHHHHHHTCC
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH---------HHHHHHHHhcCC
Confidence 98765332 23445788888 689999999999999999999863211 111111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+ ..........+.+++..|++.||++|++
T Consensus 235 ~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt 265 (326)
T 2y0a_A 235 EFE-DEYFSNTSALAKDFIRRLLVKDPKKRMT 265 (326)
T ss_dssp CCC-HHHHTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred CcC-ccccccCCHHHHHHHHHHccCChhhCCC
Confidence 110 0111222345678889999999999954
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-27 Score=222.58 Aligned_cols=201 Identities=15% Similarity=0.173 Sum_probs=146.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccC--CCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWEN--EEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
.+.|...+.||+|+||+||+|+. .+|+.||||++..... ......+.+.+|++++. +|+|+++++++ +..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~----~~~~ 98 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET----YSSD 98 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEE----EEET
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEE----EEeC
Confidence 35799999999999999999997 4689999999864321 11223577999999987 88888888887 6777
Q ss_pred ccchhhhhhcccchhhhhhhc-------------------------------------cCccccccccCC---ceEEeec
Q 037624 246 ACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLREL---EAFVADF 285 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~---~~ki~Df 285 (408)
...++++||+ ++++|..++. +||.|++++.+. .+||+||
T Consensus 99 ~~~~lv~e~~-~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 99 GMLYMVFEFM-DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp TEEEEEEECC-SSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred CEEEEEEeCC-CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecC
Confidence 8899999999 8888854431 789999997554 4999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
|+++.............||+.| .++|||||||++|||+||+.||.... ......+...
T Consensus 178 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----------~~~~~~i~~~ 247 (351)
T 3c0i_A 178 GVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----------ERLFEGIIKG 247 (351)
T ss_dssp TTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----------HHHHHHHHHT
T ss_pred cceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----------HHHHHHHHcC
Confidence 9998876544334456788887 68999999999999999999986421 1111222222
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...... .........+.+++..||+.||++|++
T Consensus 248 ~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s 280 (351)
T 3c0i_A 248 KYKMNP-RQWSHISESAKDLVRRMLMLDPAERIT 280 (351)
T ss_dssp CCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred CCCCCc-cccccCCHHHHHHHHHHCCCChhHCcC
Confidence 221110 111122345678889999999999955
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-27 Score=225.00 Aligned_cols=197 Identities=17% Similarity=0.223 Sum_probs=142.8
Q ss_pred HhhcccceeecccceeEEEEEEe--------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL--------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~--------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
.++|...+.||+|+||.||+|+. .++..||||+++.. ......+.+.+|++++. +|+|+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~-- 155 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-- 155 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT--CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC--cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE--
Confidence 36788899999999999999986 23567999999753 22334577999999986 68888888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+......++|+||+ ++|+|.+++ ++||.
T Consensus 156 --~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~ 232 (370)
T 2psq_A 156 --CTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 232 (370)
T ss_dssp --ECSSSSCEEEEECC-TTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred --EccCCCEEEEEEcC-CCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchh
Confidence 78888899999999 888886553 17888
Q ss_pred ccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|++++.++.+||+|||+++........ .....||..| .++|||||||++|||+| |+.||......
T Consensus 233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~ 312 (370)
T 2psq_A 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 312 (370)
T ss_dssp GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999999999876433221 1223455556 68999999999999999 99998643211
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. +...+......+. +..+...+.+++..||+.+|++|++
T Consensus 313 ---------~-~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rpt 351 (370)
T 2psq_A 313 ---------E-LFKLLKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPT 351 (370)
T ss_dssp ---------G-HHHHHHTTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---------H-HHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcC
Confidence 0 1111111111100 1122345678889999999999944
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=237.08 Aligned_cols=196 Identities=20% Similarity=0.277 Sum_probs=147.3
Q ss_pred HHhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..++|...+.||+|+||.||+|++.. +..||||.++... ...+.|.+|++++. +|+|+++++++ +....
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~----~~~~~ 289 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREP 289 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECSSS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEEEE----EecCC
Confidence 45678889999999999999999865 8899999997532 23678999999997 89999998888 88888
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++|+||+ ++|+|.+++. +||.|++++.++.+||+|||+++..
T Consensus 290 ~~~lv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 290 PFYIITEFM-TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp SCEEEEECC-TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred cEEEEEEcc-CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceec
Confidence 899999999 8888887762 7889999999999999999999976
Q ss_pred CCCCCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 292 YCDSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 292 ~~~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
....... ....+|..| .++|||||||++|||+| |+.||...... .+.+.+....+.
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----------~~~~~~~~~~~~ 438 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----------QVYELLEKDYRM 438 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----------GHHHHHHTTCCC
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----------HHHHHHHcCCCC
Confidence 5332111 223345556 68999999999999999 99998643211 111222222221
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+. +..+...+.+++..||+.||++|++
T Consensus 439 ~~---~~~~~~~l~~li~~cl~~dP~~RPs 465 (495)
T 1opk_A 439 ER---PEGCPEKVYELMRACWQWNPSDRPS 465 (495)
T ss_dssp CC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CC---CCCCCHHHHHHHHHHcCcChhHCcC
Confidence 11 1123345778889999999999943
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=220.84 Aligned_cols=195 Identities=18% Similarity=0.225 Sum_probs=143.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+. .+|+.||||++...........+.+.+|++++. +|+|+++++++ +......
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~----~~~~~~~ 84 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV----ITTPTDI 84 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEE----EEeCCEE
Confidence 4788899999999999999997 568899999986532222223467899999997 88888888887 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ . |++.+++. +||.|+++++++.+||+|||+++......
T Consensus 85 ~lv~E~~-~-g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 85 VMVIEYA-G-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EEEECCC-C-EEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEEEECC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999998 4 56666541 79999999999999999999998764332
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.....+||+.| .++|||||||+++||+||+.||+....... ...+.......+ .
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------~~~i~~~~~~~p--~- 229 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------FKKVNSCVYVMP--D- 229 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------BCCCCSSCCCCC--T-
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------HHHHHcCCCCCc--c-
Confidence 23445788887 479999999999999999999974321111 001111111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 230 --~~s~~~~~li~~~L~~dP~~Rpt 252 (336)
T 3h4j_B 230 --FLSPGAQSLIRRMIVADPMQRIT 252 (336)
T ss_dssp --TSCHHHHHHHHTTSCSSGGGSCC
T ss_pred --cCCHHHHHHHHHHcCCChhHCcC
Confidence 11234567889999999999944
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=213.78 Aligned_cols=153 Identities=24% Similarity=0.236 Sum_probs=118.6
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||+||+|+..+|+.||||++.... .+....+.+.+|++++. +|+|+++++++ +......+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~ 76 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDV----IHTKKRLV 76 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS-GGGCCCHHHHHHHHGGGGCCCTTBCCEEEE----EECSSCEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccc-cccccchhHHHHHHHHHhcCCCCEeeeeeE----EccCCeEE
Confidence 4688889999999999999999889999999997532 22233567889999997 88888888887 66777889
Q ss_pred hhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++ ++.+++ ++||.|++++.++.+||+|||+++......
T Consensus 77 lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 77 LVFEHL-DQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EEEECC-SE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEEEec-CC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 999998 43 554433 178999999999999999999998765433
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.......||..| .++|||||||+++||+||+.||..
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 333344566666 689999999999999999999864
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=220.24 Aligned_cols=218 Identities=20% Similarity=0.267 Sum_probs=153.0
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccC--CCcchhhHHHHHHHHhc--ccCCcceeeeEeEe
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWEN--EEPASTRSFQNEVDILY--PKYDIETLLSFMDF 240 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~ 240 (408)
++....++|...+.||+|+||.||+|.. .+++.||+|++..... ......+.+.+|++++. +|+|+++++++
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~--- 96 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV--- 96 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEE---
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehh---
Confidence 4667788999999999999999999998 4588999999865321 12345678999999987 88999888888
Q ss_pred eecCCccchhhhhhcccchhhhhhh-------------------------------------------------------
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTM------------------------------------------------------- 265 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------------- 265 (408)
+......++|+||+ ++|+|.+++
T Consensus 97 -~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 97 -YEDEQYICLVMELC-HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp -EECSSEEEEEEECC-CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred -hccCCeEEEEEeCC-CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 77888899999999 888876543
Q ss_pred ------------------ccCccccccccCC--ceEEeecccccccCCCCC----eeeecccCCCC--------------
Q 037624 266 ------------------IMKPLSWIGLREL--EAFVADFGMTMHLYCDSS----NLTLLAGTYGY-------------- 307 (408)
Q Consensus 266 ------------------~~k~~~~~l~~~~--~~ki~DfGla~~~~~~~~----~~~~~~gt~~y-------------- 307 (408)
+++|.|++++.++ .+||+|||+++....... ......||+.|
T Consensus 175 ~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 254 (345)
T 3hko_A 175 RQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254 (345)
T ss_dssp HHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCC
T ss_pred HHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCC
Confidence 1688899997665 899999999986543211 12345567666
Q ss_pred cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 308 EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 308 ~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.++|||||||+++||+||+.||..... ......+.+.....+. .........+.+++..|++.+|++|++
T Consensus 255 ~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 255 PKCDAWSAGVLLHLLLMGAVPFPGVND---------ADTISQVLNKKLCFEN-PNYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCTTS-GGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCh---------HHHHHHHHhcccccCC-cccccCCHHHHHHHHHHcCCChhHCCC
Confidence 589999999999999999999864321 1122233333222111 111122345678889999999999965
Q ss_pred CcccccchHHHh
Q 037624 388 KPFHEISISELR 399 (408)
Q Consensus 388 ~~~~~~~~~~~~ 399 (408)
.. ..++.+.+.
T Consensus 325 ~~-~~l~hp~~~ 335 (345)
T 3hko_A 325 AM-RALQHPWIS 335 (345)
T ss_dssp HH-HHHHSHHHH
T ss_pred HH-HHhcChhhc
Confidence 43 233344444
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-27 Score=213.91 Aligned_cols=195 Identities=19% Similarity=0.309 Sum_probs=144.7
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|...+.||+|+||.||+|...++..||||++.... ...+++.+|++++. +|+|+++++++ +......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS----MSEDEFFQEAQTMMKLSHPKLVKFYGV----CSKEYPI 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT----BCHHHHHHHHHHHHHCCCTTBCCEEEE----ECSSSSE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC----CcHHHHHHHHHHHHhCCCCCEeeEEEE----EccCCce
Confidence 35788899999999999999999888899999997532 23467899999987 88888888888 7788888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 79 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 79 YIVTEYI-SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEEECC-TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEEcc-CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999 8888877652 7899999999999999999999876543
Q ss_pred CCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC-CCCcc
Q 037624 295 SSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR-LSPPV 359 (408)
Q Consensus 295 ~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~-l~~~~ 359 (408)
.... ....||..| .++||||||++++||+| |+.||+..... .....+.... ...+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~- 227 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---------EVVLKVSQGHRLYRP- 227 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH---------HHHHHHHTTCCCCCC-
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH---------HHHHHHHcCCCCCCC-
Confidence 3221 223445556 68999999999999999 99998643211 1111111111 1111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..||+.+|++|++.
T Consensus 228 -~---~~~~~l~~li~~~l~~~p~~Rps~ 252 (268)
T 3sxs_A 228 -H---LASDTIYQIMYSCWHELPEKRPTF 252 (268)
T ss_dssp -T---TSCHHHHHHHHHTTCSSGGGSCCH
T ss_pred -C---cChHHHHHHHHHHcCCChhhCcCH
Confidence 1 112346688899999999999543
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-27 Score=220.13 Aligned_cols=193 Identities=17% Similarity=0.162 Sum_probs=137.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ........+..|+..+. +|+|+++++++ +..+..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~----~~~~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLEQA----WEEGGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC-CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc-cChHHHHHHHHHHHHHHHhcCCCcEEEEEEE----EEeCCE
Confidence 68999999999999999999985 69999999986532 22233445556665554 79999999888 778888
Q ss_pred chhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ . +++..++ ++||.|++++.++.+||+|||+++....
T Consensus 132 ~~lv~e~~-~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 132 LYLQTELC-G-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEEEEECC-C-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEEEEecc-C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 89999998 3 3554443 1799999999999999999999987643
Q ss_pred CCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 294 DSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.. ......||.+| .++|||||||+++||+||+.|+..... ...+.+..... ..
T Consensus 210 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~------------~~~~~~~~~~~---~~ 273 (311)
T 3p1a_A 210 AG-AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG------------WQQLRQGYLPP---EF 273 (311)
T ss_dssp ------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH------------HHHHTTTCCCH---HH
T ss_pred CC-CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------------HHHHhccCCCc---cc
Confidence 32 23345678777 689999999999999999776542211 11111111111 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.||++|++
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt 298 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRAT 298 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcC
Confidence 2223445778889999999999954
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=228.58 Aligned_cols=196 Identities=18% Similarity=0.243 Sum_probs=148.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|++++. +|+|+++++++ +......
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~----~~~~~~~ 91 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV----ISTPSDI 91 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEE----EEECCEE
Confidence 46888899999999999999985 68999999997532222223567899999997 78888888887 7777889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|++++.++.+||+|||+++......
T Consensus 92 ~lv~E~~-~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 92 FMVMEYV-SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EEEEECC-SSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EEEEeCC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999 8899887762 78999999999999999999998765432
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
.....+||+.| .++|||||||+++||+||+.||+.... ......+.+.....+ .
T Consensus 171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---------~~~~~~i~~~~~~~p--~- 237 (476)
T 2y94_A 171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV---------PTLFKKICDGIFYTP--Q- 237 (476)
T ss_dssp -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS---------HHHHHHHHTTCCCCC--T-
T ss_pred -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH---------HHHHHHHhcCCcCCC--c-
Confidence 23456788888 479999999999999999999974321 111222333222211 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 238 --~~s~~~~~Li~~~L~~dP~~Rpt 260 (476)
T 2y94_A 238 --YLNPSVISLLKHMLQVDPMKRAT 260 (476)
T ss_dssp --TCCHHHHHHHHHHTCSSTTTSCC
T ss_pred --cCCHHHHHHHHHHcCCCchhCcC
Confidence 11224567888999999999944
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-27 Score=224.02 Aligned_cols=194 Identities=16% Similarity=0.163 Sum_probs=138.1
Q ss_pred ccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 175 DIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
...+.||+|+||.||+|+. .+|+.||+|+++... ....+.|.+|++++. +|+|+++++++ +......++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~----~~~~~~~~lv 164 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDA----FESKNDIVLV 164 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEEEEE
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEE----EEECCEEEEE
Confidence 3457899999999999997 468899999997532 234578999999997 88888888888 7778889999
Q ss_pred hhhcccchhhhhhhc----------------------------------cCcccccc--ccCCceEEeecccccccCCCC
Q 037624 252 NTWRGEACSVFCTMI----------------------------------MKPLSWIG--LRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~----------------------------------~k~~~~~l--~~~~~~ki~DfGla~~~~~~~ 295 (408)
+||+ ++++|.+++. +||.|+++ +.++.+||+|||+++......
T Consensus 165 ~E~~-~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 165 MEYV-DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp EECC-TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred EeCC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999 8888866551 78899988 467899999999999875432
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......||++| .++|||||||+++||+||+.||..... ...+..+.......+. ...
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---------~~~~~~i~~~~~~~~~-~~~ 312 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND---------AETLNNILACRWDLED-EEF 312 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHHHHTCCCSCS-GGG
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhccCCCCh-hhh
Confidence 23345788888 589999999999999999999864321 1112222222221110 111
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..|++.||++|++
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps 336 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRIS 336 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred ccCCHHHHHHHHHHcCCChhhCCC
Confidence 122345678889999999999954
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-27 Score=221.49 Aligned_cols=196 Identities=18% Similarity=0.226 Sum_probs=142.2
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..+.|...+.||+|+||.||+|+. .+|+.||||++...........+.|.+|++++. +|+|+++++++ +..+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~ 127 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC----YLREH 127 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEETT
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEECC
Confidence 345688899999999999999997 578999999997543333344567999999987 88999888888 77778
Q ss_pred cchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 247 CFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
..++|+||+ + |++.+.+. +||.|++++.++.+||+|||+++...
T Consensus 128 ~~~lv~e~~-~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 128 TAWLVMEYC-L-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEEEEEECC-S-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred eEEEEEecC-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 889999998 5 45544331 78999999999999999999998764
Q ss_pred CCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 293 CDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
... ...||+.| .++|||||||+++||+||+.||........ ...+.....+....
T Consensus 206 ~~~----~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 206 PAN----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPALQS 275 (348)
T ss_dssp SBC----CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCCC
T ss_pred CCC----cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHhcCCCCCCC
Confidence 322 24566655 579999999999999999999864321110 00011111122211
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++..||+.||++|++
T Consensus 276 ---~---~~~~~l~~li~~~l~~dP~~Rps 299 (348)
T 1u5q_A 276 ---G---HWSEYFRNFVDSCLQKIPQDRPT 299 (348)
T ss_dssp ---T---TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---C---CCCHHHHHHHHHHcccChhhCcC
Confidence 1 11234567888999999999944
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=212.49 Aligned_cols=198 Identities=21% Similarity=0.300 Sum_probs=137.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+. .+|+.||||.+...........+.+.+|++++. +|+|+++++++ +.....
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 85 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY----FEDSNY 85 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEE----EECSSE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEE----EccCCe
Confidence 35788999999999999999997 568999999996532222233567899999987 88888888887 777788
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++....
T Consensus 86 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 86 VYLVLEMC-HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEEEEECC-TTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEecC-CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 89999999 8888876652 788899999999999999999987654
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.........||..| .++|||||||+++||+||+.||........ ...+.......+ .
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------~~~~~~~~~~~~--~ 233 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------LNKVVLADYEMP--S 233 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------CCSSCCCCC--T
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---------HHHHhhcccCCc--c
Confidence 33333345677777 689999999999999999999864321111 111111111111 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 234 ---~~~~~~~~li~~~l~~dp~~Rps 256 (278)
T 3cok_A 234 ---FLSIEAKDLIHQLLRRNPADRLS 256 (278)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCC
T ss_pred ---ccCHHHHHHHHHHcccCHhhCCC
Confidence 11234568889999999999954
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-26 Score=212.63 Aligned_cols=197 Identities=18% Similarity=0.246 Sum_probs=148.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|... +++.||+|.+...........+.+.+|+.++. +|+|+++++++ +......
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~ 90 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF----FEDNDFV 90 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeee----eccCCEE
Confidence 46888899999999999999985 47899999987644344455678899999886 88888888887 7778888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++......
T Consensus 91 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 91 FVVLELC-RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEEEECC-TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999 8888776552 78899999999999999999998765444
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||..| .++||||||++++||+||+.||...... .....+.......+ .
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~--~-- 236 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIP--K-- 236 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHTTCCCCC--T--
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHhhccCCCc--c--
Confidence 334456788877 5899999999999999999998643211 11112222221111 0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 237 -~~~~~~~~li~~~l~~~p~~Rps 259 (294)
T 2rku_A 237 -HINPVAASLIQKMLQTDPTARPT 259 (294)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred -ccCHHHHHHHHHHcccChhhCcC
Confidence 11234667888999999999944
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-27 Score=214.37 Aligned_cols=194 Identities=22% Similarity=0.304 Sum_probs=143.2
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|+..+++.||+|++.... ...++|.+|++++. +|+|+++++++ +......+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~~ 81 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGV----CLEQAPIC 81 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHHTCCCTTBCCEEEE----ECSSSSEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc----cCHHHHHHHHHHHHhCCCCCEeeEEEE----EecCCceE
Confidence 5788889999999999999999888899999997532 23467999999987 88888888887 77788889
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++++|.+++. ++|.|++++.++.+||+|||+++......
T Consensus 82 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 82 LVFEFM-EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EEEECC-TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEEEeC-CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 999999 8888887662 68899999999999999999998654321
Q ss_pred Ce-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCC-CCCCccc
Q 037624 296 SN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDP-RLSPPVD 360 (408)
Q Consensus 296 ~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~ 360 (408)
.. .....||..| .++|||||||+++||+| |+.||..... ......+... ....+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~-- 229 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---------SEVVEDISTGFRLYKP-- 229 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHHHHHTTCCCCCC--
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH---------HHHHHHHhcCccCCCC--
Confidence 11 1223445455 68999999999999999 9999864321 1111111111 11110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..||+.+|++|++.
T Consensus 230 ~---~~~~~~~~li~~~l~~~p~~Rps~ 254 (269)
T 4hcu_A 230 R---LASTHVYQIMNHCWRERPEDRPAF 254 (269)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred C---cCCHHHHHHHHHHccCCcccCcCH
Confidence 1 112346688899999999999553
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-26 Score=209.60 Aligned_cols=199 Identities=18% Similarity=0.285 Sum_probs=148.3
Q ss_pred HhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|...+.||+|+||.||+|.... +..||+|++..... ...+.+.+|++++. +|+|+++++++ +.....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~ 80 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYET----FEDNTD 80 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEE----EecCCe
Confidence 4679999999999999999999854 77899999976432 23578999999987 88888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCcccccc---ccCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIG---LRELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l---~~~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++++|.+++. ++|.|+++ +.++.+||+|||+++..
T Consensus 81 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 81 IYLVMELC-TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEEEEECC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEEecc-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 89999999 8888876652 78999998 68899999999999876
Q ss_pred CCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... ......||..| .++|||||||+++||+||+.||..... ......+.......+.
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~- 228 (277)
T 3f3z_A 160 KPGK-MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTD---------SEVMLKIREGTFTFPE- 228 (277)
T ss_dssp CTTS-CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCCH-
T ss_pred cCcc-chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHhCCCCCCc-
Confidence 5332 23445688877 689999999999999999999864321 1112222222222110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.........+.+++..|++.||++|++.
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~ 256 (277)
T 3f3z_A 229 KDWLNVSPQAESLIRRLLTKSPKQRITS 256 (277)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred hhhhcCCHHHHHHHHHHccCChhhCcCH
Confidence 1111234457788899999999999553
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=214.10 Aligned_cols=153 Identities=17% Similarity=0.216 Sum_probs=109.8
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|... +|+.||||++.... .....+.+.+|++++. +|+|+++++++ +..+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~ 77 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDV----IHTENK 77 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEE----ECCTTE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEE----EEECCe
Confidence 467888999999999999999974 58899999997533 2234567889999997 88888888887 777788
Q ss_pred chhhhhhcccchhhhhhh---------------------------------------ccCccccccccCCceEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTM---------------------------------------IMKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l---------------------------------------~~k~~~~~l~~~~~~ki~DfGla 288 (408)
.++++||+ + ++|.+++ ++||.|++++.++.+||+|||++
T Consensus 78 ~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 155 (317)
T 2pmi_A 78 LTLVFEFM-D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155 (317)
T ss_dssp EEEEEECC-C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred EEEEEEec-C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccc
Confidence 89999998 5 4554433 17899999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+.............||..| .++|||||||+++||+||+.||..
T Consensus 156 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 211 (317)
T 2pmi_A 156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211 (317)
T ss_dssp EETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred eecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8765443333445667666 689999999999999999999864
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-26 Score=220.38 Aligned_cols=197 Identities=21% Similarity=0.335 Sum_probs=139.9
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--cc--CCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PK--YDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~--~n~~~l~~~~~~~~~~~~~ 247 (408)
+.|...+.||+|+||.||+|...+++.||||++.... ......+.|.+|++++. +| +|+++++++ +..+..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~----~~~~~~ 83 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY----EITDQY 83 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE----EECSSE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeee----EeeCCE
Confidence 4688889999999999999999889999999997532 23345578999999986 44 778888777 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++|+ .+++|.+++. +||.|++++ ++.+||+|||+++.....
T Consensus 84 ~~lv~e~--~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 84 IYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEEEECC--CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEEEEeC--CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 8899995 4667766652 788898886 678999999999877543
Q ss_pred CCe--eeecccCCCC-----------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 295 SSN--LTLLAGTYGY-----------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 295 ~~~--~~~~~gt~~y-----------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
... .....||++| .++|||||||+++||+||+.||.... .....+..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~~ 232 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--------NQISKLHA 232 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--------SHHHHHHH
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh--------hHHHHHHH
Confidence 322 2356788888 26899999999999999999986421 11122334
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
++++........ .....+.+++..||+.||++|++
T Consensus 233 ~~~~~~~~~~~~---~~~~~l~~li~~~L~~dp~~Rpt 267 (343)
T 3dbq_A 233 IIDPNHEIEFPD---IPEKDLQDVLKCCLKRDPKQRIS 267 (343)
T ss_dssp HHCTTSCCCCCC---CSCHHHHHHHHHHTCSSTTTSCC
T ss_pred HhcCCcccCCcc---cCCHHHHHHHHHHcCCChhHCCC
Confidence 444333221111 11234668888999999999944
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-26 Score=216.89 Aligned_cols=197 Identities=18% Similarity=0.246 Sum_probs=148.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+++.. +++.||+|.+...........+.+.+|+.++. +|+|+++++++ +......
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 116 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF----FEDNDFV 116 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EecCCeE
Confidence 57888899999999999999985 47899999997654444455678899999986 88888888887 7778888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. +++.|++++.++.+||+|||+++......
T Consensus 117 ~lv~e~~-~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 117 FVVLELC-RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EEEECCC-TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEEEecC-CCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999 8888776552 78999999999999999999998775444
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.......||..| .++|||||||+++||+||+.||...... .....+.......+ .
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~--~-- 262 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIP--K-- 262 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHHTCCCCC--T--
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH---------HHHHHHhcCCCCCC--c--
Confidence 344456788888 5899999999999999999998643211 01111111111111 0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 263 -~~~~~~~~li~~~l~~dp~~Rps 285 (335)
T 2owb_A 263 -HINPVAASLIQKMLQTDPTARPT 285 (335)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred -cCCHHHHHHHHHHccCChhHCcC
Confidence 11224567888999999999944
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-27 Score=224.77 Aligned_cols=208 Identities=17% Similarity=0.217 Sum_probs=146.1
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcc
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIE 232 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~ 232 (408)
+...++....++|...+.||+|+||.||+|++ .+++.||||+++.. ......+.|.+|++++. +|+|++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc--CCHHHHHHHHHHHHHHHhhcCCccee
Confidence 34455666678999999999999999999974 34678999999753 22334567999999986 678888
Q ss_pred eeeeEeEeeecCC-ccchhhhhhcccchhhhhhh----------------------------------------------
Q 037624 233 TLLSFMDFVCIKD-ACFWFMNTWRGEACSVFCTM---------------------------------------------- 265 (408)
Q Consensus 233 ~l~~~~~~~~~~~-~~~~lv~e~~~~~g~l~~~l---------------------------------------------- 265 (408)
+++++ +... ...++++||+ ++|+|.+++
T Consensus 90 ~~~~~----~~~~~~~~~iv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 90 NLLGA----CTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp CEEEE----ECSTTSCCEEEEECC-TTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred eeeee----eecCCCceEEEEEec-CCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 77777 5554 4578899999 888876543
Q ss_pred -----------------------------------------------------ccCccccccccCCceEEeecccccccC
Q 037624 266 -----------------------------------------------------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 266 -----------------------------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
++||.|++++.++.+||+|||+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 168889999999999999999998764
Q ss_pred CCCC--eeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 293 CDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 293 ~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
.... ......||..| .++|||||||+++||+| |+.||........ ....+.....+....
T Consensus 245 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~ 319 (359)
T 3vhe_A 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPD 319 (359)
T ss_dssp SCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-----HHHHHHHTCCCCCCT
T ss_pred ccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-----HHHHHHcCCCCCCCC
Confidence 4332 22445677777 68999999999999999 9999864321100 000011111111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..||+.||++|+++
T Consensus 320 -------~~~~~l~~li~~~l~~dP~~Rps~ 343 (359)
T 3vhe_A 320 -------YTTPEMYQTMLDCWHGEPSQRPTF 343 (359)
T ss_dssp -------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred -------CCCHHHHHHHHHHccCChhhCCCH
Confidence 122346688899999999999553
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=216.22 Aligned_cols=201 Identities=17% Similarity=0.193 Sum_probs=133.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|.. .+|+.||||++......+....+.+.+|++++. +|+|+++++++ +......
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~ 107 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS----FIEDNEL 107 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE----EEETTEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----EEcCCcE
Confidence 5799999999999999999997 568999999997644444456678999999987 88888888887 7777888
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 108 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 108 NIVLELA-DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEEEECC-CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEEEecC-CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999 8888766541 7888999999999999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...........||..| .++|||||||+++||+||+.||...... .......+.........
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~ 259 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-------LYSLCKKIEQCDYPPLP 259 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-------HHHHHHHHHTTCSCCCC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-------HHHHHHHhhcccCCCCc
Confidence 5443333445677777 5899999999999999999998632110 00001111111111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.||++|++
T Consensus 260 ---~~~~~~~l~~li~~~l~~dp~~Rps 284 (310)
T 2wqm_A 260 ---SDHYSEELRQLVNMCINPDPEKRPD 284 (310)
T ss_dssp ---TTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---ccccCHHHHHHHHHHcCCChhhCCC
Confidence 0112234668889999999999944
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=216.20 Aligned_cols=215 Identities=16% Similarity=0.266 Sum_probs=140.1
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeee
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVC 242 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~ 242 (408)
-....++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++. +|+|+++++++.....
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 3445578999999999999999999985 889999998642 1244555555553 7888888877722211
Q ss_pred cCCccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCCceEE
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRELEAFV 282 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~~~ki 282 (408)
......++++||+ ++|+|.+++. +||.|++++.++++||
T Consensus 105 ~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 105 GSWTQLYLITDYH-ENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp GGGCEEEEEECCC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CCCCceEEEEecc-CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 1126788999999 8888876652 5788999999999999
Q ss_pred eecccccccCCCCCee----eecccCCCC------------c------ccchhhhhHHHHHHHhCCCCCcccccccCC--
Q 037624 283 ADFGMTMHLYCDSSNL----TLLAGTYGY------------E------KCDVYSFGVVALEILMGRQPGELLSSLSSS-- 338 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~----~~~~gt~~y------------~------k~DVySfGvvl~Elltg~~p~~~~~~~~~~-- 338 (408)
+|||+++......... ....||..| . ++|||||||++|||+||..|+.........
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999998764433221 245788888 2 389999999999999995544321110000
Q ss_pred ---ccccccchhhhcc-CCCCCCcc--chhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 339 ---SSSDQNIMLLDVL-DPRLSPPV--DRMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 339 ---~~~~~~~~~~~~~-d~~l~~~~--~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
............+ .....+.. .....++...+.+++..||+.||++|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 320 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTAL 320 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHH
Confidence 0000001111111 11111111 112235677788999999999999996543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-27 Score=222.23 Aligned_cols=195 Identities=16% Similarity=0.277 Sum_probs=134.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|+..+.||+|+||+||+|+.. +++ .||+|.+.... .....+.|.+|+.++. +|+|+++++++ +..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGI----CLT 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEE----EES
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEE----Eec
Confidence 46888999999999999999973 444 36888886432 2334678999999987 88888888887 655
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+. .+++++|+ ++|+|.+++. +||.|++++.++++||+|||+++.
T Consensus 89 ~~-~~~v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 89 ST-VQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEEECC-TTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CC-eEEEEEec-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 54 56778888 8888877652 789999999999999999999988
Q ss_pred cCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .....||..| .++|||||||++|||+| |+.||+.... ..+...+....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----------~~~~~~~~~~~ 236 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----------SEISSILEKGE 236 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----------GGHHHHHHTTC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH----------HHHHHHHHcCC
Confidence 7544322 2234556666 68999999999999999 9999864321 11122222211
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. ...+...+.+++..||+.+|++|++
T Consensus 237 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rps 265 (327)
T 3poz_A 237 RLPQ---PPICTIDVYMIMVKCWMIDADSRPK 265 (327)
T ss_dssp CCCC---CTTBCHHHHHHHHHHTCSCGGGSCC
T ss_pred CCCC---CccCCHHHHHHHHHHcCCChhhCCC
Confidence 1110 1123345778889999999999944
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-26 Score=214.66 Aligned_cols=199 Identities=19% Similarity=0.214 Sum_probs=141.5
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-----
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC----- 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~----- 242 (408)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++. +|+|++++++++....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 467999999999999999999985 78999999997532 3345678999999997 7888888777621100
Q ss_pred ------------------------------------------------cCCccchhhhhhcccchhhhhhhc--------
Q 037624 243 ------------------------------------------------IKDACFWFMNTWRGEACSVFCTMI-------- 266 (408)
Q Consensus 243 ------------------------------------------------~~~~~~~lv~e~~~~~g~l~~~l~-------- 266 (408)
......++++||+ ++++|.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLC-RKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECC-CSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEec-CCCCHHHHHhcccCccch
Confidence 0112368999999 8888776541
Q ss_pred ----------------------------cCccccccccCCceEEeecccccccCCCCC------------eeeecccCCC
Q 037624 267 ----------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS------------NLTLLAGTYG 306 (408)
Q Consensus 267 ----------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~------------~~~~~~gt~~ 306 (408)
+||.|++++.++.+||+|||+++....... ......||..
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 789999999999999999999988754321 1133568887
Q ss_pred C------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHH
Q 037624 307 Y------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTIL 374 (408)
Q Consensus 307 y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~ 374 (408)
| .++|||||||+++||+||..|+.... ............ .........+.+++
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~~~~~~~~li 306 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-----------RIITDVRNLKFP----LLFTQKYPQEHMMV 306 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-----------HHHHHHHTTCCC----HHHHHHCHHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-----------HHHHHhhccCCC----cccccCChhHHHHH
Confidence 7 68999999999999999988753211 111122222221 22233445567888
Q ss_pred HhhccCCCCCcCC
Q 037624 375 FACLRSNPKTPMQ 387 (408)
Q Consensus 375 ~~C~~~~P~~Rm~ 387 (408)
..||+.||++|++
T Consensus 307 ~~~l~~~p~~Rps 319 (332)
T 3qd2_B 307 QDMLSPSPTERPE 319 (332)
T ss_dssp HHHHCSSGGGSCC
T ss_pred HHHccCCCCcCCC
Confidence 9999999999965
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=222.27 Aligned_cols=197 Identities=20% Similarity=0.336 Sum_probs=141.0
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c--cCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P--KYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~--~~n~~~l~~~~~~~~~~~~~ 247 (408)
+.|...+.||+|+||.||+|...+++.||||++.... .+....+.|.+|++++. + |+|+++++++ +.....
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~----~~~~~~ 130 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY----EITDQY 130 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE----EECSSE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc-ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEE----EecCCE
Confidence 4588999999999999999999889999999997532 23345678999999986 3 5788887777 677777
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++|+ .+++|.+++. +||.|++++ ++.+||+|||+++.....
T Consensus 131 ~~lv~E~--~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 131 IYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEEEEC--CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred EEEEEec--CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 8899994 4667766552 788999884 689999999999876543
Q ss_pred CCe--eeecccCCCC-----------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 295 SSN--LTLLAGTYGY-----------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 295 ~~~--~~~~~gt~~y-----------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
... ....+||+.| .++|||||||++|||+||+.||.... .....+..
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--------~~~~~~~~ 279 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--------NQISKLHA 279 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--------CHHHHHHH
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh--------HHHHHHHH
Confidence 221 2345677777 26899999999999999999986321 11122344
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
++++....+..... ...+.+++..||+.||++|++
T Consensus 280 ~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps 314 (390)
T 2zmd_A 280 IIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRIS 314 (390)
T ss_dssp HHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCC
T ss_pred HhCccccCCCCccc---hHHHHHHHHHHcccChhhCCC
Confidence 44443332111111 234668888999999999944
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=213.99 Aligned_cols=196 Identities=17% Similarity=0.243 Sum_probs=140.7
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|...+.||+|+||.||+|...++..||||++.... ...++|.+|++++. +|+|+++++++ +......
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~ 94 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLSHEKLVQLYGV----CTKQRPI 94 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHHTCCCTTBCCEEEE----ECSSSSE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC----CCHHHHHHHHHHHhcCCCCCEeeEEEE----EecCCCe
Confidence 45788899999999999999999888899999997532 23467999999987 88888888887 7788888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 95 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 95 FIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EEEECCC-TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred EEEEecc-CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999 8888877652 7889999999999999999999866432
Q ss_pred CCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 295 SSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 295 ~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... .....||..| .++|||||||+++||+| |+.||...... .....+... ......
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---------~~~~~~~~~-~~~~~~ 243 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---------ETAEHIAQG-LRLYRP 243 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---------HHHHHHHTT-CCCCCC
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---------HHHHHHhcc-cCCCCC
Confidence 111 1123344455 68999999999999999 99998643211 111111111 110000
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..||+.+|++|++.
T Consensus 244 ~---~~~~~l~~li~~~l~~~p~~Rps~ 268 (283)
T 3gen_A 244 H---LASEKVYTIMYSCWHEKADERPTF 268 (283)
T ss_dssp T---TCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred C---cCCHHHHHHHHHHccCChhHCcCH
Confidence 1 112346688899999999999553
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-27 Score=229.97 Aligned_cols=195 Identities=18% Similarity=0.267 Sum_probs=139.2
Q ss_pred HHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
..++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++. +|+|+++++++ +.. ..
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~-~~ 252 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAV----VSE-EP 252 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECS-SS
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC----CCHHHHHHHHHHHHhCCCCCEeeEEEE----EcC-Cc
Confidence 456788899999999999999999888889999997532 23578999999997 88888888877 554 56
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.++++||+ ++|+|.+++. ++|.|+++++++.+||+|||+++...
T Consensus 253 ~~iv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 253 IYIVTEYM-SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp CEEEECCC-TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred eEEEehhh-cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 78999999 8888887762 78899999999999999999998764
Q ss_pred CCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 293 CDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 293 ~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... .....+|..| .++|||||||++|||+| |+.||..... ......+. ...+.+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~---------~~~~~~i~-~~~~~~ 401 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVE-RGYRMP 401 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------HHHHHHHH-TTCCCC
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHH-cCCCCC
Confidence 33211 1223455555 68999999999999999 9999864321 11111111 111111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. +..+...+.+++..||+.+|++|++
T Consensus 402 ~---~~~~~~~l~~li~~cl~~dP~~Rpt 427 (452)
T 1fmk_A 402 C---PPECPESLHDLMCQCWRKEPEERPT 427 (452)
T ss_dssp C---CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred C---CCCCCHHHHHHHHHHccCChhhCcC
Confidence 0 1123445778889999999999944
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=224.43 Aligned_cols=204 Identities=18% Similarity=0.231 Sum_probs=137.9
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCC-----CcchhhHHHHHHHHhc--ccCCcceeeeEeEe
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENE-----EPASTRSFQNEVDILY--PKYDIETLLSFMDF 240 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~ 240 (408)
...++|...+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++. +|+|++++.++
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~--- 208 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF--- 208 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE---
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE---
Confidence 4467899999999999999999998 45889999998753211 1122346889999987 88888888877
Q ss_pred eecCCccchhhhhhcccchhhhhhhc---------------------------------cCcccccccc---CCceEEee
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR---ELEAFVAD 284 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~---~~~~ki~D 284 (408)
+..+ ..++++||+ ++|+|.+++. +||.|++++. +..+||+|
T Consensus 209 -~~~~-~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 209 -FDAE-DYYIVLELM-EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -EESS-EEEEEEECC-TTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -EecC-ceEEEEEcC-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEee
Confidence 4433 467999999 8899887662 7899999864 45699999
Q ss_pred cccccccCCCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 285 FGMTMHLYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 285 fGla~~~~~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
||+++..... .......||++| .++|||||||+++||+||+.||........ ....
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--------~~~~ 356 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--------LKDQ 356 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--------HHHH
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--------HHHH
Confidence 9999876432 223445677777 479999999999999999999864321110 0111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
+........ ..........+.+++..|++.||++|++.
T Consensus 357 i~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 357 ITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp HHTTCCCCC-HHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhcCCCCCC-chhhcccCHHHHHHHHHHccCChhHCcCH
Confidence 111111110 01112234457788899999999999553
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-27 Score=234.23 Aligned_cols=197 Identities=19% Similarity=0.209 Sum_probs=148.0
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+.. +|+.||||++.............+.+|++++. +|+|++++.++ +.....
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~----~~~~~~ 258 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA----YETKDA 258 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE----EECSSE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEE----EeeCCE
Confidence 467999999999999999999984 68999999997533222233567889999987 88888888777 777788
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.++|+||+ ++|+|..++. +||.|++++.++++||+|||+++...
T Consensus 259 l~lVmEy~-~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 259 LCLVLTLM-NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEEEECCC-CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEEcC-CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999 8999876652 78999999999999999999998875
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh-cc--CCCCCC
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD-VL--DPRLSP 357 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~--d~~l~~ 357 (408)
... .....+||+.| .++|||||||++|||+||+.||....... ....+.. +. ...+..
T Consensus 338 ~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~------~~~~i~~~i~~~~~~~p~ 410 (576)
T 2acx_A 338 EGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI------KREEVERLVKEVPEEYSE 410 (576)
T ss_dssp TTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC------CHHHHHHHHHHCCCCCCT
T ss_pred cCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch------hHHHHHHHhhcccccCCc
Confidence 433 33456899988 68999999999999999999997432110 0001111 11 111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....+.+++..|++.||++|+
T Consensus 411 -------~~s~~~~dLI~~lL~~dP~~R~ 432 (576)
T 2acx_A 411 -------RFSPQARSLCSQLLCKDPAERL 432 (576)
T ss_dssp -------TSCHHHHHHHHHHTCSSGGGST
T ss_pred -------cCCHHHHHHHHHhccCCHHHcC
Confidence 1123466788899999999996
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-26 Score=216.76 Aligned_cols=199 Identities=17% Similarity=0.239 Sum_probs=142.6
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
..++|...+.||+|+||.||+|... +|+.||||.+.... ..+.+|++++. +|+|+++++++ +..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-------~~~~~E~~~l~~~~~hp~iv~~~~~----~~~~ 88 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIITLKDV----YDDG 88 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-------CCCHHHHHHHHHHTTSTTBCCEEEE----EECS
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-------CChHHHHHHHHHhcCCCCcCeEEEE----EEcC
Confidence 3578999999999999999999984 58899999997532 22345666664 68998888888 7778
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCcccccccc-C---CceEEeecccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR-E---LEAFVADFGMT 288 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~-~---~~~ki~DfGla 288 (408)
...++++||+ ++|+|.+++. +||.|+++.+ + ..+||+|||++
T Consensus 89 ~~~~lv~E~~-~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 89 KYVYVVTELM-KGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp SEEEEEECCC-CSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred CEEEEEEeCC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 8899999999 8888877652 7889998753 2 35999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
+............+||..| .++|||||||++|||+||+.||...... ........+......
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~~~~i~~~~~~ 241 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD------TPEEILARIGSGKFS 241 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS------CHHHHHHHHHHCCCC
T ss_pred ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC------CHHHHHHHHccCCcc
Confidence 9876554445567889988 6899999999999999999998642110 001111111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+. .........+.+++..|++.||++|++
T Consensus 242 ~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t 271 (342)
T 2qr7_A 242 LSG-GYWNSVSDTAKDLVSKMLHVDPHQRLT 271 (342)
T ss_dssp CCS-TTTTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred cCc-cccccCCHHHHHHHHHHCCCChhHCcC
Confidence 100 111112234667888999999999954
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=218.83 Aligned_cols=198 Identities=18% Similarity=0.239 Sum_probs=130.7
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..+.|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++. +|+|+++++++ +....
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~ 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEI----FETPT 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEE----EECSS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeee----EecCC
Confidence 3467899999999999999999985 47899999997532 2456888998887 89999888888 77788
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCcccccccc---CCceEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR---ELEAFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~---~~~~ki~DfGla~~ 290 (408)
..++++||+ ++++|.+++. +||.|++++. ++.+||+|||+++.
T Consensus 122 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 122 EISLVLELV-TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp EEEEEECCC-CSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred eEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 899999999 8888877652 7889999874 89999999999987
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..... ......||..| .++|||||||++|||+||+.||..... .......+........
T Consensus 201 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 201 VEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG--------DQFMFRRILNCEYYFI 271 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC--------HHHHHHHHHTTCCCCC
T ss_pred cCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc--------cHHHHHHHHhCCCccC
Confidence 64322 22345678777 689999999999999999999863211 1111222222221110
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ....+....+.+++..|++.||++|++
T Consensus 272 ~-~~~~~~~~~~~~li~~~L~~dP~~Rpt 299 (349)
T 2w4o_A 272 S-PWWDEVSLNAKDLVRKLIVLDPKKRLT 299 (349)
T ss_dssp T-TTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred C-chhhhCCHHHHHHHHHHccCChhhCcC
Confidence 0 111122345668889999999999944
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-26 Score=215.17 Aligned_cols=155 Identities=19% Similarity=0.265 Sum_probs=119.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|++++. +|+|+++++++ +......
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 99 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEV----CKKKKRW 99 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEE----eecCCEE
Confidence 57888999999999999999985 48899999986532 33344567889999887 88998888888 7778888
Q ss_pred hhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ +++++..+. +++|.|++++.++.+||+|||+++......
T Consensus 100 ~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 100 YLVFEFV-DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEEEECC-SEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EEEEecC-CcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999 777766543 178999999999999999999998765443
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.......||..| .++|||||||+++||+||+.||...
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 333445677766 5789999999999999999998643
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-27 Score=216.08 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=138.9
Q ss_pred hhcccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|+..+.||+|+||+||+|++ .+++.||||++... .....+.|.+|++++. +|+|+++++++ +..
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~ 82 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGV----CYS 82 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEE----ECH
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEE----Eec
Confidence 5788889999999999999985 35889999999742 3344678999999997 78888887776 433
Q ss_pred --Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccc
Q 037624 245 --DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 245 --~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
....++++||+ ++++|.+++. +||.|++++.++++||+|||++
T Consensus 83 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 83 AGRRNLKLIMEYL-PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp HHHTSCEEEEECC-TTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred CCCCceEEEEEeC-CCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 34578999999 8888887662 7899999999999999999999
Q ss_pred cccCCCCCe---eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc-----cCC-ccccccchh
Q 037624 289 MHLYCDSSN---LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL-----SSS-SSSDQNIML 347 (408)
Q Consensus 289 ~~~~~~~~~---~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~-----~~~-~~~~~~~~~ 347 (408)
+........ .....||..| .++|||||||+++||+||..|+...... ... ........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 876543221 1223455445 6899999999999999999997532110 000 000000011
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
.+.+......+. ...+...+.+++..||+.||++|++..
T Consensus 242 ~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ 280 (295)
T 3ugc_A 242 IELLKNNGRLPR---PDGCPDEIYMIMTECWNNNVNQRPSFR 280 (295)
T ss_dssp HHHHHTTCCCCC---CTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHhccCcCCC---CcCcCHHHHHHHHHHcCCChhhCCCHH
Confidence 111111111110 112344577888999999999995543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=220.02 Aligned_cols=200 Identities=20% Similarity=0.258 Sum_probs=136.5
Q ss_pred hhcccc-eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 172 EDFDIK-YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 172 ~~f~~~-~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
++|... +.||+|+||+||+|... +|+.||||++.. ...+.+|++++. +|+|++++++++...+....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 456655 68999999999999984 588999999863 245667777763 89999999998665555567
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCcccccccc---CCceEEeecccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR---ELEAFVADFGMT 288 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~---~~~~ki~DfGla 288 (408)
..++|+||+ ++|+|.+++. +|+.|++++. ++.+||+|||++
T Consensus 133 ~~~lv~E~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 133 CLLIVMECL-DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEEEECC-CSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEEEeC-CCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 789999999 8888877662 7888999986 789999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
+...... ..+..+||..| .++|||||||++|||+||+.||........... ....+......
T Consensus 212 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----~~~~i~~~~~~ 285 (400)
T 1nxk_A 212 KETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYE 285 (400)
T ss_dssp EECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-----HHHHHHHTCCC
T ss_pred cccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-----HHHHHHcCccc
Confidence 8764322 23456778877 689999999999999999999964332211000 00111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+. .........+.+++..||+.||++|++
T Consensus 286 ~~~-~~~~~~s~~~~~li~~~L~~dP~~Rpt 315 (400)
T 1nxk_A 286 FPN-PEWSEVSEEVKMLIRNLLKTEPTQRMT 315 (400)
T ss_dssp CCT-TTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred CCC-cccccCCHHHHHHHHHHCCCChhHCcC
Confidence 000 001112334678889999999999954
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-26 Score=209.87 Aligned_cols=201 Identities=17% Similarity=0.234 Sum_probs=144.3
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|++++. +|+|+++++++ +.....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDS----IQEESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EECSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc-CCHHHHHHHHHHHHHHHHcCCCCcCeEEEE----EEcCCE
Confidence 467899999999999999999984 58899999997533 23344567889999887 88888888888 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCc---eEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELE---AFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~---~ki~DfGla~~~ 291 (408)
.++++||+ +++++..++. ++|.|++++.++. +||+|||++...
T Consensus 80 ~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 80 HYLVFDLV-TGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp EEEEECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 89999999 8888865541 7889999975544 999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.... ......||..| .++||||||++++||++|+.||...... .....+.......+.
T Consensus 159 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~~ 228 (284)
T 3kk8_A 159 NDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---------RLYAQIKAGAYDYPS 228 (284)
T ss_dssp CSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCCCT
T ss_pred ccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---------HHHHHHHhccccCCc
Confidence 5332 22345677777 6899999999999999999998642211 011111111111000
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.........+.+++..|++.||++|++.
T Consensus 229 -~~~~~~~~~~~~li~~~l~~dp~~Rps~ 256 (284)
T 3kk8_A 229 -PEWDTVTPEAKSLIDSMLTVNPKKRITA 256 (284)
T ss_dssp -TTTTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred -hhhcccCHHHHHHHHHHcccChhhCCCH
Confidence 0001122346688889999999999553
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.5e-27 Score=212.84 Aligned_cols=196 Identities=20% Similarity=0.351 Sum_probs=131.7
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCC-cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE-PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~-~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+.. |+.||||++....... ....+.+.+|++++. +|+|++++.++ +..+...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 81 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV----CLKEPNL 81 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEE----ECCC--C
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEE----EecCCce
Confidence 47888899999999999999984 8889999987543222 234567899999987 89999988888 7788888
Q ss_pred hhhhhhcccchhhhhhh-----------------------------------ccCcccccccc--------CCceEEeec
Q 037624 249 WFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLR--------ELEAFVADF 285 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~--------~~~~ki~Df 285 (408)
++++||+ ++++|..++ +++|.|++++. ++.+||+||
T Consensus 82 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 82 CLVMEFA-RGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEEEECC-TTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEEEcC-CCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 9999999 888877654 15788888875 778999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
|+++...... .....||..| .++||||||++++||+||+.||...... .....+...
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~ 229 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL---------AVAYGVAMN 229 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH---------HHHHHHHTS
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHhhhcC
Confidence 9998764332 2234677777 6899999999999999999998643211 111111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+. .......+.+++..||+.+|++|++
T Consensus 230 ~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps 260 (271)
T 3dtc_A 230 KLALPI---PSTCPEPFAKLMEDCWNPDPHSRPS 260 (271)
T ss_dssp CCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCCC---CcccCHHHHHHHHHHhcCCcccCcC
Confidence 111110 0122345678889999999999954
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=219.16 Aligned_cols=198 Identities=17% Similarity=0.203 Sum_probs=145.1
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|...+.||+|+||.||+|... +|+.||+|.+.... ......+.+|++++. +|+|+++++++ +.....
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~----~~~~~~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDA----FEDKYE 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEE----EECSSE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEE----EEeCCE
Confidence 367999999999999999999984 58899999986422 223567899999997 78888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccc--cCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL--RELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~--~~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++|+|.+++. +||.|++++ .++.+||+|||+++..
T Consensus 123 ~~lv~E~~-~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 123 MVLILEFL-SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEEEECC-CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEEEcC-CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999 8888877662 788899887 4578999999999987
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.... ......||..| .++|||||||++|||+||+.||....... .+..+.......+.
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---------~~~~i~~~~~~~~~ 271 (387)
T 1kob_A 202 NPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---------TLQNVKRCDWEFDE 271 (387)
T ss_dssp CTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---------HHHHHHHCCCCCCS
T ss_pred CCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH---------HHHHHHhCCCCCCc
Confidence 5433 23445788888 68999999999999999999986432111 11111111110000
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..||+.||++|++
T Consensus 272 -~~~~~~s~~~~~li~~~L~~dP~~Rpt 298 (387)
T 1kob_A 272 -DAFSSVSPEAKDFIKNLLQKEPRKRLT 298 (387)
T ss_dssp -STTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcC
Confidence 000112234668889999999999944
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=227.09 Aligned_cols=201 Identities=20% Similarity=0.311 Sum_probs=149.8
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|++++. +|+|+++++++ +.....
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~~ 100 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF----FEDKGY 100 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEE----EEeCCE
Confidence 467999999999999999999985 68999999997644333445678999999997 78888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCcccccc---ccCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIG---LRELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l---~~~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++++|.+++. +||.|+++ ..++.+||+|||+++..
T Consensus 101 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 101 FYLVGEVY-TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEEEECCC-CSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999 8888876652 78999999 46789999999999877
Q ss_pred CCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... ......||+.| .++||||+||++|||+||+.||..... ...+..+.......+.
T Consensus 180 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~i~~~~~~~~~- 248 (484)
T 3nyv_A 180 EASK-KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANE---------YDILKKVEKGKYTFEL- 248 (484)
T ss_dssp CCCC-SHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCCS-
T ss_pred cccc-ccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHcCCCCCCC-
Confidence 5432 23345688877 689999999999999999999864321 1111222222211110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+........+.+++..|++.+|++|++
T Consensus 249 ~~~~~~s~~~~~li~~~L~~dp~~R~s 275 (484)
T 3nyv_A 249 PQWKKVSESAKDLIRKMLTYVPSMRIS 275 (484)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSGGGSCC
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcC
Confidence 111122345668889999999999955
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-26 Score=216.97 Aligned_cols=207 Identities=19% Similarity=0.232 Sum_probs=150.3
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC-----cchhhHHHHHHHHhc---ccCCcceee
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE-----PASTRSFQNEVDILY---PKYDIETLL 235 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~-----~~~~~~~~~E~~~l~---~~~n~~~l~ 235 (408)
.......++|...+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.++. .|+|+++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556678999999999999999999985 69999999987532111 122456788998886 688888888
Q ss_pred eEeEeeecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEE
Q 037624 236 SFMDFVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFV 282 (408)
Q Consensus 236 ~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki 282 (408)
++ +......++++||+ ++++|.+++. ++|.|++++.++.+||
T Consensus 167 ~~----~~~~~~~~lv~e~~-~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DS----YESSSFMFLVFDLM-RKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EE----EEBSSEEEEEECCC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EE----EeeCCEEEEEEEeC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence 87 67778899999999 8888877652 7899999999999999
Q ss_pred eecccccccCCCCCeeeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccccc
Q 037624 283 ADFGMTMHLYCDSSNLTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQN 344 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~ 344 (408)
+|||++..+.... ......||+.| .++|||||||++|||+||+.||..... .
T Consensus 242 ~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---------~ 311 (365)
T 2y7j_A 242 SDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ---------I 311 (365)
T ss_dssp CCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------H
T ss_pred EecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH---------H
Confidence 9999998765432 23345677766 379999999999999999999864211 1
Q ss_pred chhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 345 IMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 345 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.......+. .........+.+++..|++.||++|++
T Consensus 312 ~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps 353 (365)
T 2y7j_A 312 LMLRMIMEGQYQFSS-PEWDDRSSTVKDLISRLLQVDPEARLT 353 (365)
T ss_dssp HHHHHHHHTCCCCCH-HHHSSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HHHHHHHhCCCCCCC-cccccCCHHHHHHHHHHcCCChhHCcC
Confidence 111112222211110 111122345778889999999999955
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=211.15 Aligned_cols=201 Identities=16% Similarity=0.187 Sum_probs=147.6
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC---cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE---PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.+.|...+.||+|+||.||+|+.. +|+.||||.+....... ....+.+.+|++++. +|+|+++++++ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~ 86 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDV----YEN 86 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE----EEC
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEE----Eec
Confidence 467999999999999999999985 58899999997643221 123577999999987 88888888887 777
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC----ceEEeeccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL----EAFVADFGM 287 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~----~~ki~DfGl 287 (408)
....++++||+ ++++|.+++. ++|.|++++.++ .+||+|||+
T Consensus 87 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 87 RTDVVLILELV-SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp SSEEEEEECCC-CSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred CCEEEEEEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 78899999999 8888887662 788999998777 799999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
++...... ......||..| .++|||||||+++||+||+.||..... ...+..+.....
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~i~~~~~ 235 (321)
T 2a2a_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLANITSVSY 235 (321)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---------HHHHHHHHTTCC
T ss_pred ceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH---------HHHHHHHHhccc
Confidence 98765432 22345677777 689999999999999999999863211 111122222111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. .........+.+++..|++.||++|++
T Consensus 236 ~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps 266 (321)
T 2a2a_A 236 DFDE-EFFSHTSELAKDFIRKLLVKETRKRLT 266 (321)
T ss_dssp CCCH-HHHTTCCHHHHHHHHTTSCSSTTTSCC
T ss_pred ccCh-hhhcccCHHHHHHHHHHcCCChhhCcC
Confidence 1110 111122345678889999999999944
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-26 Score=216.85 Aligned_cols=199 Identities=17% Similarity=0.201 Sum_probs=136.2
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++. +|+|+++++++ +.....
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~~ 90 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEV----ILTPTH 90 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCCCTTBCCEEEE----EECSSE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCCCCCCCcEEEE----EeeCCE
Confidence 357888999999999999999985 688999999975322 2366889998886 88888888888 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCc--eEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELE--AFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~--~ki~DfGla~~~~ 292 (408)
.++++||+ ++|+|..++. +||.|++++.++. +||+|||+++...
T Consensus 91 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 91 LAIIMEYA-SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 99999999 8888877652 7899999986665 9999999998543
Q ss_pred CCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
... ......||+.| .++|||||||++|||+||+.||........ ....+..+.......+.
T Consensus 170 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 170 LHS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-----YRKTIQRILSVKYSIPD 243 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-----HHHHHHHHHTTCCCCCT
T ss_pred ccC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-----HHHHHHHHhcCCCCCCC
Confidence 222 22345688888 348999999999999999999974322111 11112223332222111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .....+.+++..||+.+|++|++
T Consensus 244 ~~---~~s~~~~~li~~~L~~dP~~Rps 268 (361)
T 3uc3_A 244 DI---RISPECCHLISRIFVADPATRIS 268 (361)
T ss_dssp TS---CCCHHHHHHHHHHSCSCTTTSCC
T ss_pred cC---CCCHHHHHHHHHHccCChhHCcC
Confidence 00 11234568889999999999954
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=216.30 Aligned_cols=201 Identities=17% Similarity=0.261 Sum_probs=128.7
Q ss_pred HHHhhcccceeecccceeEEEEEEeCC-Cc---EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLTS-SK---VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~~-g~---~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
...++|...+.||+|+||.||+|+... +. .||||.+.... ......+.|.+|++++. +|+|+++++++ +
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~ 94 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI-IASSDIEEFLREAACMKEFDHPHVAKLVGV----S 94 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEE----E
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccc-cCHHHHHHHHHHHHHHHHCCCCceehhhce----e
Confidence 345689999999999999999999754 32 79999997532 23345678999999997 78888888887 4
Q ss_pred cCCccc------hhhhhhcccchhhhhhhc---------------------------------------cCccccccccC
Q 037624 243 IKDACF------WFMNTWRGEACSVFCTMI---------------------------------------MKPLSWIGLRE 277 (408)
Q Consensus 243 ~~~~~~------~lv~e~~~~~g~l~~~l~---------------------------------------~k~~~~~l~~~ 277 (408)
...... ++++||+ ++++|..++. +||.|++++++
T Consensus 95 ~~~~~~~~~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 95 LRSRAKGRLPIPMVILPFM-KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED 173 (323)
T ss_dssp ECC-------CEEEEEECC-TTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred eccccccCCCccEEEEEec-cCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC
Confidence 444333 7899999 8888766541 78999999999
Q ss_pred CceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcccc
Q 037624 278 LEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSD 342 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~ 342 (408)
+.+||+|||+++........ .....||..| .++|||||||+++||+| |+.||......
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------- 246 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA------- 246 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-------
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-------
Confidence 99999999999876433211 1223445555 68999999999999999 99998643211
Q ss_pred ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 343 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+........ .......+.+++..||+.||++|++.
T Consensus 247 --~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~ 286 (323)
T 3qup_A 247 --EIYNYLIGGNRLKQ----PPECMEEVYDLMYQCWSADPKQRPSF 286 (323)
T ss_dssp --GHHHHHHTTCCCCC----CTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred --HHHHHHhcCCCCCC----CCccCHHHHHHHHHHccCChhhCcCH
Confidence 11111221111110 01223456788899999999999553
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-27 Score=222.76 Aligned_cols=196 Identities=19% Similarity=0.211 Sum_probs=141.2
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||+||+|++. +++.||||++... ........|.+|+.++. +|+|+++++++ +.
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~----~~ 144 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGV----SL 144 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EC
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCCCCCCCeEEEE----Ee
Confidence 57888999999999999999953 4668999999642 23344567899999887 88999888888 77
Q ss_pred CCccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccC---Cce
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRE---LEA 280 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~---~~~ 280 (408)
.....++|+||+ ++|+|.+++. +||.|++++.+ ..+
T Consensus 145 ~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 145 QSLPRFILLELM-AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSSSCEEEEECC-TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred cCCCCEEEEEeC-CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence 888889999999 8888876651 78899999844 459
Q ss_pred EEeecccccccCCCC--CeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccc
Q 037624 281 FVADFGMTMHLYCDS--SNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNI 345 (408)
Q Consensus 281 ki~DfGla~~~~~~~--~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 345 (408)
||+|||+++...... .......||..| .++|||||||+++||+| |+.||..... ..
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~---------~~ 294 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QE 294 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---------HH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---------HH
Confidence 999999998653221 112334567666 68999999999999998 9999864321 11
Q ss_pred hhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 346 MLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 346 ~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+........ ...+...+.+++..||+.+|++|++
T Consensus 295 ~~~~i~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps 332 (367)
T 3l9p_A 295 VLEFVTSGGRMDP----PKNCPGPVYRIMTQCWQHQPEDRPN 332 (367)
T ss_dssp HHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHcCCCCCC----CccCCHHHHHHHHHHcCCCHhHCcC
Confidence 1111111111110 0122334678889999999999944
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=211.75 Aligned_cols=154 Identities=20% Similarity=0.257 Sum_probs=119.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+.. +|+.||||++.... ......+.+.+|++++. +|+|+++++++ +......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEV----FRRKRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhhe----eecCCeE
Confidence 56888999999999999999985 48999999986532 33344567889999987 88998888888 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ +++++...+. ++|.|++++.++.+||+|||+++......
T Consensus 78 ~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 78 HLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EEEEECC-SEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEEEeC-CCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 9999999 7777765531 78999999999999999999998765443
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.......||..| .++|||||||+++||+||+.||..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 205 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG 205 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 333444566555 689999999999999999999864
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=218.78 Aligned_cols=202 Identities=16% Similarity=0.190 Sum_probs=144.6
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeCC-C-----cEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeE
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLTS-S-----KVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSF 237 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~~-g-----~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~ 237 (408)
.....++|...+.||+|+||.||+|.... + ..||+|.+.... .....+.+.+|++++. +|+|+++++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 33445789999999999999999999732 2 479999997532 2334577999999986 68898888888
Q ss_pred eEeeecCCccchhhhhhcccchhhhhhh-----------------------------------------------ccCcc
Q 037624 238 MDFVCIKDACFWFMNTWRGEACSVFCTM-----------------------------------------------IMKPL 270 (408)
Q Consensus 238 ~~~~~~~~~~~~lv~e~~~~~g~l~~~l-----------------------------------------------~~k~~ 270 (408)
+......++++||+ ++|+|.+++ +++|.
T Consensus 119 ----~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~ 193 (333)
T 2i1m_A 119 ----CTHGGPVLVITEYC-CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193 (333)
T ss_dssp ----ECSSSSCEEEEECC-TTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred ----EecCCceEEEEecC-CCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccc
Confidence 77888899999999 888876653 17888
Q ss_pred ccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|++++.++.+||+|||+++........ .....||..| .++|||||||+++||+| |+.||......
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 273 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS
T ss_pred eEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh
Confidence 999999999999999999876443322 1234456666 68999999999999999 99998643211
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.......... .....+.+++..||+.||++|++
T Consensus 274 ---------~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps 313 (333)
T 2i1m_A 274 ---------SKFYKLVKDGYQMAQPA---FAPKNIYSIMQACWALEPTHRPT 313 (333)
T ss_dssp ---------HHHHHHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---------HHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHhccChhhCcC
Confidence 01111111111110001 11235678889999999999944
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=210.60 Aligned_cols=202 Identities=15% Similarity=0.194 Sum_probs=142.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--c
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--A 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~ 246 (408)
+.|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|++++. +|+|+++++++ +... .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 82 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAI----EEETTTR 82 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEE----EECTTTC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEE----eecCCCc
Confidence 46888899999999999999985 488999999975332 223567889999987 88888888776 4433 3
Q ss_pred cchhhhhhcccchhhhhhhc------------------------------------cCcccccc----ccCCceEEeecc
Q 037624 247 CFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIG----LRELEAFVADFG 286 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l----~~~~~~ki~DfG 286 (408)
..++++||+ ++++|.+++. +||.|+++ +.++.+||+|||
T Consensus 83 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 83 HKVLIMEFC-PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp CEEEEEECC-TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred eEEEEEeCC-CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 678999999 8888876652 78889988 677889999999
Q ss_pred cccccCCCCCeeeecccCCCC--------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccch
Q 037624 287 MTMHLYCDSSNLTLLAGTYGY--------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIM 346 (408)
Q Consensus 287 la~~~~~~~~~~~~~~gt~~y--------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~ 346 (408)
+++....... .....||..| .++|||||||++|||+||+.||......... ...
T Consensus 162 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-----~~~ 235 (319)
T 4euu_A 162 AARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-----KEV 235 (319)
T ss_dssp TCEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC-----HHH
T ss_pred CceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh-----HHH
Confidence 9987654332 2334566665 4799999999999999999998632211100 000
Q ss_pred hhhc---------------------cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 347 LLDV---------------------LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 347 ~~~~---------------------~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+..+ .++.+.... .........+.+++..|++.||++|++
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ll~~~L~~dP~~R~s 296 (319)
T 4euu_A 236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGLQVLLTPVLANILEADQEKCWG 296 (319)
T ss_dssp HHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHHHHHHHHHHHHHSCCCTTTSCC
T ss_pred HHHHhcCCCcccchhhhcccCCccccCccCCccc-ccchhHHHHhHHHHHHhccCChhhhcc
Confidence 0000 011111111 223445566778889999999999955
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=207.71 Aligned_cols=151 Identities=19% Similarity=0.234 Sum_probs=120.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+.+|++++. +|+|+++++++ +..+...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDV----LHSDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEE----EEETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-CcCCcchHHHHHHHHHhcCCCCCEeeEEeE----EEeCCEE
Confidence 46888999999999999999984 58899999997643 23344577899999997 88888888887 6777888
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ +++ +...+ ++||.|++++.++.+||+|||+++.....
T Consensus 77 ~lv~e~~-~~~-l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 77 TLVFEFC-DQD-LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EEEEECC-SEE-HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred EEEEecC-CCC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9999998 543 32221 17899999999999999999999877544
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCC
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPG 329 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~ 329 (408)
........||..| .++|||||||+++||+||+.|+
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~ 202 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC
Confidence 3334445666665 6899999999999999998885
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=217.88 Aligned_cols=200 Identities=18% Similarity=0.225 Sum_probs=145.8
Q ss_pred HHHHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeE
Q 037624 168 IEATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMD 239 (408)
Q Consensus 168 ~~at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~ 239 (408)
....++|...+.||+|+||.||+|+.. +++.||||.++... .....+.|.+|++++. +|+|+++++++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-- 118 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGV-- 118 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE--
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEE--
Confidence 345678999999999999999999984 34789999997532 2344678999999997 88888888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhh------------------------------------------------------
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM------------------------------------------------------ 265 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------------ 265 (408)
+......++++||+ ++++|.+++
T Consensus 119 --~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i 195 (343)
T 1luf_A 119 --CAVGKPMCLLFEYM-AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF 195 (343)
T ss_dssp --ECSSSSCEEEEECC-TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --EccCCceEEEEecC-CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 77788899999999 888876643
Q ss_pred ---ccCccccccccCCceEEeecccccccCCCCC--eeeecccCCCC------------cccchhhhhHHHHHHHh-CCC
Q 037624 266 ---IMKPLSWIGLRELEAFVADFGMTMHLYCDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQ 327 (408)
Q Consensus 266 ---~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~ 327 (408)
++||.|++++.++.+||+|||+++....... ......||..| .++|||||||++|||+| |+.
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 1688899999999999999999987643221 12334566666 68999999999999999 999
Q ss_pred CCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 328 PGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 328 p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
||..... ......+.+...... .......+.+++..||+.||++|++
T Consensus 276 p~~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 276 PYYGMAH---------EEVIYYVRDGNILAC----PENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp TTTTSCH---------HHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cCCCCCh---------HHHHHHHhCCCcCCC----CCCCCHHHHHHHHHHcccCcccCCC
Confidence 9864321 111122222222110 0122345678889999999999954
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=212.65 Aligned_cols=207 Identities=19% Similarity=0.294 Sum_probs=145.0
Q ss_pred HHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeee
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVC 242 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~ 242 (408)
-....++|...+.||+|+||.||+|+. +|+.||||.+... ..+.+.+|++++. +|+|+++++++ +
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~----~ 105 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAA----D 105 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEE----E
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEee----e
Confidence 345567899999999999999999998 5889999998642 2456778887764 68888887777 4
Q ss_pred cCCc----cchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCC
Q 037624 243 IKDA----CFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLREL 278 (408)
Q Consensus 243 ~~~~----~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~ 278 (408)
.... ..++++||+ ++|+|.+++. +||.|++++.++
T Consensus 106 ~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 106 NKDNGTWTQLWLVSDYH-EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp ECCCSSCCCEEEEECCC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred cccCCccceeEEEEeec-CCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence 4443 678999999 8888876541 678889999999
Q ss_pred ceEEeecccccccCCCCCe----eeecccCCCC------------------cccchhhhhHHHHHHHhC----------C
Q 037624 279 EAFVADFGMTMHLYCDSSN----LTLLAGTYGY------------------EKCDVYSFGVVALEILMG----------R 326 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~----~~~~~gt~~y------------------~k~DVySfGvvl~Elltg----------~ 326 (408)
++||+|||+++........ .....||..| .++|||||||++|||+|| +
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876544322 1334677777 268999999999999999 5
Q ss_pred CCCcccccccCCccccccchhhhccCCCCCCccc--hhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 327 QPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD--RMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 327 ~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~--~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
.||........ ........+....+.+... ....++...+.+++..||+.||++|++..
T Consensus 265 ~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 325 (342)
T 1b6c_B 265 LPYYDLVPSDP----SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL 325 (342)
T ss_dssp CTTTTTSCSSC----CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred cCccccCcCcc----cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence 56543211100 0011111122222222111 12235667788999999999999995543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=209.55 Aligned_cols=196 Identities=26% Similarity=0.354 Sum_probs=141.6
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|... +++.||||++...........+.+.+|++++. +|+|+++++++ +.....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 83 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY----FHDATR 83 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhhe----EecCCE
Confidence 468999999999999999999884 47789999986533222233567889999987 78888888888 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ +++++..++. ++|.|++++.++.+||+|||++......
T Consensus 84 ~~lv~e~~-~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 84 VYLILEYA-PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EEEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEEEecC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 89999999 8888876652 7899999999999999999998765322
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
......||..| .++||||||++++||++|+.||...... .....+.......+ .
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~--~- 228 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---------ETYKRISRVEFTFP--D- 228 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHHTCCCCC--T-
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH---------HHHHHHHhCCCCCC--C-
Confidence 22345677777 6899999999999999999998643211 11111111111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.+|++|++
T Consensus 229 --~~~~~~~~li~~~l~~~p~~Rps 251 (279)
T 3fdn_A 229 --FVTEGARDLISRLLKHNPSQRPM 251 (279)
T ss_dssp --TSCHHHHHHHHHHCCSSGGGSCC
T ss_pred --cCCHHHHHHHHHHhccChhhCCC
Confidence 11234567888999999999955
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=205.96 Aligned_cols=201 Identities=16% Similarity=0.217 Sum_probs=144.1
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
.|...+.||+|+||.||+|.. .++..||+|.+.... ......+.+.+|+.++. +|+|++++++++..........+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh-hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 366678899999999999998 457889999997533 23345678999999997 78888888877544344466788
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccc-cCCceEEeecccccccCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYC 293 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~ 293 (408)
+++||+ ++++|.+++. ++|.|++++ +++.+||+|||+++....
T Consensus 106 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 106 LVTELM-TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEEec-CCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 999999 8888876652 678888887 789999999999976543
Q ss_pred CCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 294 DSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
. ......||..| .++|||||||+++||+||+.||...... ......+....... ..
T Consensus 185 ~--~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~--~~ 251 (290)
T 1t4h_A 185 S--FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA---------AQIYRRVTSGVKPA--SF 251 (290)
T ss_dssp T--SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---------HHHHHHHTTTCCCG--GG
T ss_pred c--ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH---------HHHHHHHhccCCcc--cc
Confidence 2 23345678777 6899999999999999999998642211 11111111111110 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.......+.+++..||+.||++|++.
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rps~ 277 (290)
T 1t4h_A 252 DKVAIPEVKEIIEGCIRQNKDERYSI 277 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCH
Confidence 11122357788899999999999653
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-26 Score=214.16 Aligned_cols=193 Identities=17% Similarity=0.251 Sum_probs=143.7
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCc-----chhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEP-----ASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~-----~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
..++|...+.||+|+||.||+|+. .+++.||||++........ ...+.+.+|++++. +|+|+++++++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~---- 97 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI---- 97 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEE----
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEE----
Confidence 457899999999999999999996 5688999999976432221 13456788999987 88888888887
Q ss_pred ecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
+......++++||+..+.++..++. +||.|++++.++.+||+|||++
T Consensus 98 ~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 98 FENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp EECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 7778888899998833337766552 7899999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
+...... ......||..| .++|||||||++|||+||+.||..... ......
T Consensus 178 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------------~~~~~~ 241 (335)
T 3dls_A 178 AYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------------TVEAAI 241 (335)
T ss_dssp EECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------GTTTCC
T ss_pred eECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------------HHhhcc
Confidence 8775433 23345688777 478999999999999999999864211 111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. . ....+.+++..|++.||++|++
T Consensus 242 ~~~~-~----~~~~l~~li~~~L~~dP~~Rps 268 (335)
T 3dls_A 242 HPPY-L----VSKELMSLVSGLLQPVPERRTT 268 (335)
T ss_dssp CCSS-C----CCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCc-c----cCHHHHHHHHHHccCChhhCcC
Confidence 1110 0 1224667888999999999944
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=211.51 Aligned_cols=199 Identities=20% Similarity=0.355 Sum_probs=132.6
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||+||+|+... .||||+++... ......+.|.+|++++. +|+|++.++++ +. ....+
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~-~~~~~ 95 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGY----ST-APQLA 95 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EC-SSSCE
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEee----cc-CCccE
Confidence 468888999999999999998743 49999997532 33445678999999997 77777777665 43 44577
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++++|.+++. +||.|++++.++.+||+|||+++......
T Consensus 96 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 96 IVTQWC-EGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp EEEECC-CEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EEEEec-CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccc
Confidence 899999 8888877662 78999999999999999999998654321
Q ss_pred --CeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 296 --SNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 296 --~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
.......||..| .++|||||||+++||+||+.||......... ..........+.+.
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~-- 248 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----IEMVGRGSLSPDLS-- 248 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH----HHHHHHTSCCCCTT--
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH----HHHhcccccCcchh--
Confidence 122345677777 3799999999999999999998643211100 00000011111111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+...+.+++..||+.+|++|++
T Consensus 249 --~~~~~~~~~l~~li~~~l~~~p~~Rps 275 (289)
T 3og7_A 249 --KVRSNCPKRMKRLMAECLKKKRDERPS 275 (289)
T ss_dssp --SSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred --hccccCCHHHHHHHHHHccCChhhCCC
Confidence 111123456778889999999999954
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=232.98 Aligned_cols=195 Identities=17% Similarity=0.217 Sum_probs=137.5
Q ss_pred eecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 179 CFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.||+|+||.||+|.+. ++..||||+++... .....++|.+|++++. +|+|+++++++ +.. ...++|+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~----~~~-~~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGV----CQA-EALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEE----EES-SSEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEE----ecc-CCeEEEEE
Confidence 7999999999999874 46679999997532 2335678999999997 88888888887 554 45789999
Q ss_pred hcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCCCee-
Q 037624 254 WRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL- 298 (408)
Q Consensus 254 ~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~- 298 (408)
|+ ++|+|.+++. +||.|+++++++.+||+|||+++.........
T Consensus 416 ~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 416 MA-GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp CC-TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred eC-CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 99 8999987762 78999999999999999999999765432221
Q ss_pred --eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 299 --TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 299 --~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....+|..| .++|||||||++|||+| |+.||...... . +.+.+....+.+. +
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---------~-~~~~i~~~~~~~~---p 561 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---------E-VMAFIEQGKRMEC---P 561 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---------H-HHHHHHTTCCCCC---C
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---------H-HHHHHHcCCCCCC---C
Confidence 223345666 68999999999999998 99998643211 1 1111111111110 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCc--CCCcccccc
Q 037624 364 VRDIVLVSTILFACLRSNPKTP--MQKPFHEIS 394 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~~ 394 (408)
..+...+.+++..||+.+|++| +.+++..++
T Consensus 562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1234567788999999999999 444444443
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=222.55 Aligned_cols=201 Identities=19% Similarity=0.259 Sum_probs=143.6
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..+.|...+.||+|+||+||+|+.. ++..||||++..... .......+.+|+.++. +|+|+++++++ +....
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~ 109 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLDHPNIMKLYDF----FEDKR 109 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEE----EECSS
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHhCCCCCCCeEEEE----EEeCC
Confidence 3467999999999999999999984 688999999976432 2233577899999997 88888888888 77888
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCcccccccc---CCceEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR---ELEAFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~---~~~~ki~DfGla~~ 290 (408)
..++|+||+ ++|+|.+++. +||.|++++. ++.+||+|||+++.
T Consensus 110 ~~~lv~e~~-~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 110 NYYLVMECY-KGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 899999999 8888876551 7899999974 45699999999987
Q ss_pred cCCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.... .......||+.| .++||||+||++|||+||+.||..... ...+..+.......+.
T Consensus 189 ~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 189 FENQ-KKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTD---------QEILRKVEKGKYTFDS 258 (494)
T ss_dssp CBTT-BCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHTCCCCCS
T ss_pred CCCC-ccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCCc
Confidence 6533 233456788888 789999999999999999999864321 1111122111111110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.+|++|++
T Consensus 259 -~~~~~~s~~~~~li~~~L~~dp~~R~s 285 (494)
T 3lij_A 259 -PEWKNVSEGAKDLIKQMLQFDSQRRIS 285 (494)
T ss_dssp -GGGTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred -hhcccCCHHHHHHHHHHCCCChhhCcc
Confidence 111122334668889999999999955
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=214.35 Aligned_cols=209 Identities=15% Similarity=0.181 Sum_probs=145.9
Q ss_pred ccHHHHHHHHhhcccc-eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeee
Q 037624 162 FVFGDIIEATEDFDIK-YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLS 236 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~-~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~ 236 (408)
+.+.....-.+.|... +.||+|+||.||+|+.. +|+.||||++.... ........+.+|+.++. .|+|++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-RGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEE-TTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3344455556677776 88999999999999985 58899999997643 22334678899998886 5688888888
Q ss_pred EeEeeecCCccchhhhhhcccchhhhhhhc-----------------------------------cCcccccccc---CC
Q 037624 237 FMDFVCIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR---EL 278 (408)
Q Consensus 237 ~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~---~~ 278 (408)
+ +......++++||+ ++|+|.+++. ++|.|++++. ++
T Consensus 97 ~----~~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 97 V----YENTSEIILILEYA-AGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp E----EECSSEEEEEEECC-TTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBC
T ss_pred E----EEeCCeEEEEEEec-CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCC
Confidence 7 77788899999999 8888877651 6888999886 78
Q ss_pred ceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccch
Q 037624 279 EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIM 346 (408)
Q Consensus 279 ~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~ 346 (408)
.+||+|||+++...... ......||+.| .++|||||||+++||+||+.||...... ..
T Consensus 172 ~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~ 241 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ---------ET 241 (327)
T ss_dssp CEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HH
T ss_pred cEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---------HH
Confidence 99999999998764332 22345677777 6899999999999999999998643211 11
Q ss_pred hhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 347 LLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 347 ~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.......+. .........+.+++..|++.||++|++
T Consensus 242 ~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (327)
T 3lm5_A 242 YLNISQVNVDYSE-ETFSSVSQLATDFIQSLLVKNPEKRPT 281 (327)
T ss_dssp HHHHHHTCCCCCT-TTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHHHhcccccCc-hhhcccCHHHHHHHHHHcCCChhhCcC
Confidence 1111111111000 111122344668889999999999954
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-27 Score=222.05 Aligned_cols=198 Identities=21% Similarity=0.328 Sum_probs=143.9
Q ss_pred hhcccceeecccceeEEEEEEe----CCCcEEEEEecccccC-CCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL----TSSKVIALKKLHHWEN-EEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||.||+|+. .+|+.||||+++.... ......+.+.+|++++. .|+|++.+.++ +.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~----~~ 129 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA----FQ 129 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEE----EE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEE----Ee
Confidence 5899999999999999999997 3688999999975321 11223456777888876 58888888877 67
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
.....++++||+ ++++|.+++. +||.|++++.++++||+|||+++.
T Consensus 130 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 130 TETKLHLILDYI-NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp ETTEEEEEECCC-CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eCceEEEEeecC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 777889999999 8888877762 789999999999999999999987
Q ss_pred cCCCCC-eeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc--CC
Q 037624 291 LYCDSS-NLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL--DP 353 (408)
Q Consensus 291 ~~~~~~-~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--d~ 353 (408)
...... ......||..| .++|||||||++|||+||+.||........ .......+. .+
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-----~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-----QAEISRRILKSEP 283 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-----HHHHHHHHHHCCC
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-----HHHHHHHHhccCC
Confidence 643222 22345788877 578999999999999999999864321111 000011111 11
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.... +....+.+++..||+.||++|+
T Consensus 284 ~~~~-------~~~~~~~~li~~~L~~dP~~R~ 309 (355)
T 1vzo_A 284 PYPQ-------EMSALAKDLIQRLLMKDPKKRL 309 (355)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSSGGGST
T ss_pred CCCc-------ccCHHHHHHHHHHhhhCHHHhc
Confidence 1211 1223456788999999999996
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=223.21 Aligned_cols=202 Identities=20% Similarity=0.242 Sum_probs=146.2
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC----------cchhhHHHHHHHHhc--ccCCcceeee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE----------PASTRSFQNEVDILY--PKYDIETLLS 236 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~----------~~~~~~~~~E~~~l~--~~~n~~~l~~ 236 (408)
..+.|...+.||+|+||+||+|+.. +++.||||++....... ....+.+.+|++++. +|+|++++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3567999999999999999999985 57899999997543211 134567899999997 7888888888
Q ss_pred EeEeeecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC---ce
Q 037624 237 FMDFVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL---EA 280 (408)
Q Consensus 237 ~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~---~~ 280 (408)
+ +......++|+||+ ++|+|.+++. +||.|++++.++ .+
T Consensus 114 ~----~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 V----FEDKKYFYLVTEFY-EGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp E----EECSSEEEEEEECC-TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSE
T ss_pred E----EEcCCEEEEEEecC-CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccE
Confidence 8 77888899999999 8888876652 789999998654 79
Q ss_pred EEeecccccccCCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 281 FVADFGMTMHLYCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 281 ki~DfGla~~~~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
||+|||+++...... ......||+.| .++||||+||++|||++|+.||..... ...+..
T Consensus 189 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~ 258 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND---------QDIIKK 258 (504)
T ss_dssp EECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHH
T ss_pred EEEECCCCEEcCCCC-ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHH
Confidence 999999998765432 33456788888 689999999999999999999864321 111222
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.......+. .........+.+++..|++.||++|++
T Consensus 259 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t 295 (504)
T 3q5i_A 259 VEKGKYYFDF-NDWKNISDEAKELIKLMLTYDYNKRCT 295 (504)
T ss_dssp HHHCCCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHcCCCCCCc-cccCCCCHHHHHHHHHHcCCChhHCCC
Confidence 2222222110 111122345678889999999999955
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=208.70 Aligned_cols=192 Identities=16% Similarity=0.227 Sum_probs=139.1
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--cc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--AC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~~ 247 (408)
++|...+.||+|+||.||+|+.. ++.||||++.... ......+.|.+|++++. +|+|+++++++ +... ..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~~ 83 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGA----CQSPPAPH 83 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEE----ECTTTSSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEE----EccCCCCC
Confidence 47888899999999999999985 8889999997632 23345578999999997 77777777776 5554 67
Q ss_pred chhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
.++++||+ ++|+|.+++. ++|.|++++.++.++|+|||++..
T Consensus 84 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 84 PTLITHWM-PYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp CEEEEECC-TTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eEeeeccc-CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 78999999 8888877662 577888899999999999998765
Q ss_pred cCCCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
.... ...||+.| .++|||||||++|||+||+.||........ ..........+.+
T Consensus 163 ~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~ 232 (271)
T 3kmu_A 163 FQSP-----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-----GMKVALEGLRPTI 232 (271)
T ss_dssp TSCT-----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-----HHHHHHSCCCCCC
T ss_pred eccc-----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-----HHHHHhcCCCCCC
Confidence 4322 23566666 269999999999999999999864321110 0000111112222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .....+.+++..||+.||++|++
T Consensus 233 ~~-------~~~~~~~~li~~~l~~~p~~Rps 257 (271)
T 3kmu_A 233 PP-------GISPHVSKLMKICMNEDPAKRPK 257 (271)
T ss_dssp CT-------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CC-------CCCHHHHHHHHHHcCCChhhCcC
Confidence 21 12334678888999999999954
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-26 Score=219.44 Aligned_cols=203 Identities=16% Similarity=0.220 Sum_probs=145.5
Q ss_pred HhhcccceeecccceeEEEEEEeC--------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT--------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
.++|...+.||+|+||.||+|+.. .+..||||++... ......+.+.+|++++. +|+|+++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~-- 143 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGA-- 143 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE--
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhheee--
Confidence 357888999999999999999862 2457999999753 23344577899999986 78898888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+......++++||+ ++|+|.+++ ++||.
T Consensus 144 --~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~ 220 (382)
T 3tt0_A 144 --CTQDGPLYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 220 (382)
T ss_dssp --ECSSSSCEEEEECC-TTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred --eccCCceEEEEEec-CCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence 88888899999999 888887654 17888
Q ss_pred ccccccCCceEEeecccccccCCCCC--eeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSS--NLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~--~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|+++++++.+||+|||+++....... ......||..| .++|||||||+++||+| |+.||......
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~ 300 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999987643321 12233455556 68999999999999999 99998643211
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC--Cccccc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ--KPFHEI 393 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~--~~~~~~ 393 (408)
.+.+.+........ .......+.+++..||+.+|++|++ +++..+
T Consensus 301 ----------~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 301 ----------ELFKLLKEGHRMDK---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp ----------HHHHHHHTTCCCCC---CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ----------HHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 01111111111100 0122345678889999999999944 444433
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-26 Score=217.63 Aligned_cols=208 Identities=10% Similarity=0.035 Sum_probs=131.1
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHH---Hhc-ccCCcceee-eEe---Eee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVD---ILY-PKYDIETLL-SFM---DFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~---~l~-~~~n~~~l~-~~~---~~~ 241 (408)
..+|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|++ ++. +|+|+++++ .++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888899999999999999974 68899999998754333345567788854 443 377766633 332 333
Q ss_pred ecCC----------------ccchhhhhhcccchhhhhhhc---------------------------------------
Q 037624 242 CIKD----------------ACFWFMNTWRGEACSVFCTMI--------------------------------------- 266 (408)
Q Consensus 242 ~~~~----------------~~~~lv~e~~~~~g~l~~~l~--------------------------------------- 266 (408)
...+ ...++|+||+ + |+|.+++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr 218 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAA-S-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG 218 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCC-S-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCC-C-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence 2221 3368899998 5 67665541
Q ss_pred -cCccccccccCCceEEeecccccccCCCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 267 -MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 267 -~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+||.|++++.++.+||+|||+++.... ......||..| .++|||||||++|||+||+.||..
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 789999999999999999999987632 12234455555 689999999999999999999975
Q ss_pred cccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 332 LSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
...... ..................+. .......+.+++..||+.||++|++.
T Consensus 296 ~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~ 347 (371)
T 3q60_A 296 VTPGIK--GSWKRPSLRVPGTDSLAFGS---CTPLPDFVKTLIGRFLNFDRRRRLLP 347 (371)
T ss_dssp CCTTCT--TCCCBCCTTSCCCCSCCCTT---SSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred cCcccc--cchhhhhhhhccccccchhh---ccCCCHHHHHHHHHHcCCChhhCCCH
Confidence 422111 00010001111111111110 01223456688899999999999554
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-26 Score=232.26 Aligned_cols=196 Identities=18% Similarity=0.270 Sum_probs=142.7
Q ss_pred HHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
...++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|. +|+|+++++++ +.. .
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~-~ 334 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAV----VSE-E 334 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECS-S
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC----CCHHHHHHHHHHHHhCCCCCEeeEEEE----Eee-c
Confidence 3456788899999999999999999888889999997532 23578999999997 88888888877 554 5
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++|+||+ ++|+|.+++. +++.|+++++++.+||+|||+++..
T Consensus 335 ~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 335 PIYIVTEYM-SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp SCEEEECCC-TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred cceEeeehh-cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 678999999 8888887762 7889999999999999999999876
Q ss_pred CCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 292 YCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 292 ~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
...... .....+|..| .++|||||||++|||+| |+.||..... ...+..+ ....+.
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~---------~~~~~~i-~~~~~~ 483 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV-ERGYRM 483 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH---------HHHHHHH-HTTCCC
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHH-HcCCCC
Confidence 422110 1123344455 68999999999999999 9999864321 1111111 111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+. ...+...+.+++..||+.||++|++
T Consensus 484 ~~---~~~~~~~l~~li~~cl~~dP~~RPt 510 (535)
T 2h8h_A 484 PC---PPECPESLHDLMCQCWRKEPEERPT 510 (535)
T ss_dssp CC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CC---CCCCCHHHHHHHHHHcCCChhHCcC
Confidence 10 1123345678889999999999944
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-26 Score=209.22 Aligned_cols=197 Identities=16% Similarity=0.197 Sum_probs=130.3
Q ss_pred HhhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.++|...+.||+|+||.||+|.... +..||+|.+... ......+.|.+|+.++. +|+|+++++++ +.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~- 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGV----IT- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEE----EC-
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEE----Ec-
Confidence 3578889999999999999999743 457999998753 23345677999999986 78888888776 43
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+...++++||+ ++++|.+++. +||.|++++.++.+||+|||+++.
T Consensus 87 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 87 ENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SSSCEEEEECC-TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred cCccEEEEecC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence 45677899999 8888877652 789999999999999999999987
Q ss_pred cCCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 291 LYCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 291 ~~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
....... .....||..| .++|||||||+++||+| |+.||...... .....+.+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---------~~~~~i~~~~~~ 236 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---------DVIGRIENGERL 236 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---------GHHHHHHTTCCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---------HHHHHHHcCCCC
Confidence 6433211 1233455555 58999999999999997 99998643211 111122111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.. .......+.+++..||+.||++|++.
T Consensus 237 ~~----~~~~~~~l~~li~~~l~~~p~~Rps~ 264 (281)
T 1mp8_A 237 PM----PPNCPPTLYSLMTKCWAYDPSRRPRF 264 (281)
T ss_dssp CC----CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CC----CCCCCHHHHHHHHHHccCChhhCcCH
Confidence 00 01223456688899999999999543
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=207.25 Aligned_cols=198 Identities=19% Similarity=0.224 Sum_probs=139.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|...+.||+|+||.||+|.. .++..||+|++..... ....+.+.+|++++. +|+|+++++++ +......
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~~ 95 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEV----FEDYHNM 95 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHh----eecCCeE
Confidence 5789999999999999999998 4588999999976432 234578999999987 88888888888 7777888
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------------cCccccccc---cCCceEEeecccc
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGL---RELEAFVADFGMT 288 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~---~~~~~ki~DfGla 288 (408)
++++||+ ++++|.+++. ++|.|++++ .++.+||+|||++
T Consensus 96 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 96 YIVMETC-EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EEEECCC-SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEEEeC-CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999 8888876551 788899884 5688999999999
Q ss_pred cccCCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
+...... ......||..| .++|||||||+++||+||+.||........ ........+....
T Consensus 175 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~~ 246 (285)
T 3is5_A 175 ELFKSDE-HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-------QQKATYKEPNYAV 246 (285)
T ss_dssp CC-----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHCCCCCCC
T ss_pred eecCCcc-cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH-------HhhhccCCccccc
Confidence 8764332 23345677777 689999999999999999999864321100 0001111111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.... ....+.+++..|++.||++|++.
T Consensus 247 ~~~~----~~~~~~~li~~~L~~dP~~Rps~ 273 (285)
T 3is5_A 247 ECRP----LTPQAVDLLKQMLTKDPERRPSA 273 (285)
T ss_dssp --CC----CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred ccCc----CCHHHHHHHHHHccCChhhCcCH
Confidence 1000 12345678889999999999553
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-26 Score=211.59 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=139.2
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+.. +++.||||.+......+....+.+.+|+.++. +|+|+++++++ +..+..
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~----~~~~~~ 108 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDF----GEIDGQ 108 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EEETTE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEE----EeeCCe
Confidence 467999999999999999999984 68899999997654444445678999999997 78888888877 667778
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 109 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 109 LYVDMRLI-NGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEEEEECC-CCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEEEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 89999999 8888887662 7889999999999999999999876433
Q ss_pred CC-eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SS-NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~-~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.. ......||..| .++||||||++++||+||+.||...... .+...+......+. .
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----------~~~~~~~~~~~~~~-~ 256 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----------VMGAHINQAIPRPS-T 256 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----------HHHHHHHSCCCCGG-G
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----------HHHHHhccCCCCcc-c
Confidence 21 12334566666 6899999999999999999998643211 01111111111000 0
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
........+.+++..||+.||++|+
T Consensus 257 ~~~~~~~~l~~li~~~l~~dP~~Rp 281 (309)
T 2h34_A 257 VRPGIPVAFDAVIARGMAKNPEDRY 281 (309)
T ss_dssp TSTTCCTHHHHHHHHHTCSSGGGSC
T ss_pred cCCCCCHHHHHHHHHhccCCHHHHH
Confidence 0111223466788999999999995
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-26 Score=212.12 Aligned_cols=198 Identities=15% Similarity=0.203 Sum_probs=143.4
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.++|...+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|++++. +|+|+++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~---- 95 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGA---- 95 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE----
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEE----
Confidence 45788899999999999999985 346789999997532 2234578999999886 68888888888
Q ss_pred ecCCccchhhhhhcccchhhhhhh---------------------------------------------------ccCcc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTM---------------------------------------------------IMKPL 270 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l---------------------------------------------------~~k~~ 270 (408)
+..+...++++||+ ++|+|.+++ +++|.
T Consensus 96 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~ 174 (313)
T 1t46_A 96 CTIGGPTLVITEYC-CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174 (313)
T ss_dssp ECSSSSCEEEEECC-TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EecCCCcEEEEecC-CCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence 77788889999999 888876653 16888
Q ss_pred ccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|++++.++.+||+|||+++........ .....||..| .++|||||||+++||+| |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 888999999999999999877544322 1233456666 68999999999999999 99998643211
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.......... .....+.+++..||+.||++|++
T Consensus 255 ---------~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps 294 (313)
T 1t46_A 255 ---------SKFYKMIKEGFRMLSPE---HAPAEMYDIMKTCWDADPLKRPT 294 (313)
T ss_dssp ---------HHHHHHHHHTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---------hHHHHHhccCCCCCCcc---cCCHHHHHHHHHHcCCCchhCcC
Confidence 01111111111110001 12334678889999999999954
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.7e-26 Score=208.63 Aligned_cols=196 Identities=22% Similarity=0.317 Sum_probs=136.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcc----hhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPA----STRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~----~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||+||+|+. .+++.||||++......... ..+.|.+|++++. +|+|+++++++ +..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~ 94 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL----MHN 94 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEE----ETT
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhhee----ecC
Confidence 5788889999999999999998 56889999999754322221 1267899999997 77887777776 544
Q ss_pred Cccchhhhhhcccchhhhhhh------------------------------------ccCccccccccCCc-----eEEe
Q 037624 245 DACFWFMNTWRGEACSVFCTM------------------------------------IMKPLSWIGLRELE-----AFVA 283 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l------------------------------------~~k~~~~~l~~~~~-----~ki~ 283 (408)
.. ++++||+ ++++|.+++ ++||.|++++.++. +||+
T Consensus 95 ~~--~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 95 PP--RMVMEFV-PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp TT--EEEEECC-TTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred CC--eEEEEec-CCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 43 5788998 777776554 16788888876665 9999
Q ss_pred ecccccccCCCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 284 DFGMTMHLYCDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 284 DfGla~~~~~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
|||+++.... ......||..| .++|||||||++|||+||+.||...... .......
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~ 241 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-------KIKFINM 241 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-------HHHHHHH
T ss_pred CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-------HHHHHHH
Confidence 9999985432 23345677766 5799999999999999999998643211 0000111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+......... .......+.+++..||+.||++|++
T Consensus 242 ~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps 276 (287)
T 4f0f_A 242 IREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPH 276 (287)
T ss_dssp HHHSCCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhccCCCCCC---CcccCHHHHHHHHHHhcCChhhCcC
Confidence 1111111110 0122345678889999999999954
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=203.93 Aligned_cols=199 Identities=19% Similarity=0.250 Sum_probs=144.2
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||.||+|+.. +++.||||.+..... ....+.+.+|+.++. +|+|+++++++ +.....
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 79 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGH----RREGNI 79 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEE----EEETTE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeE----EEcCCE
Confidence 468999999999999999999985 688999999975332 234577899999886 78888888887 677788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 80 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 80 QYLFLEYC-SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EEEEEECC-TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEEEEEec-CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 88999999 8888877662 7888999999999999999999865432
Q ss_pred CC--eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 295 SS--NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 295 ~~--~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.. ......||..| .++|||||||+++||+||+.||....... .....+........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~- 229 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--------QEYSDWKEKKTYLN- 229 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--------HHHHHHHTTCTTST-
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--------HHHHHhhhcccccC-
Confidence 21 12334566655 57999999999999999999986432110 00111111111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++..|++.||++|++
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rps 255 (276)
T 2yex_A 230 --PWKKIDSAPLALLHKILVENPSARIT 255 (276)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred --chhhcCHHHHHHHHHHCCCCchhCCC
Confidence 00112234567889999999999954
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-26 Score=210.64 Aligned_cols=198 Identities=18% Similarity=0.269 Sum_probs=143.7
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
.++|...+.||+|+||.||+|+. .+++.||||++... ......+.+.+|++++. +|+|+++++++ +
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~ 95 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGA----C 95 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE----E
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCceeeEEEE----E
Confidence 46788899999999999999986 34578999999743 23345678999999997 78888888887 7
Q ss_pred cCCccchhhhhhcccchhhhhhh---------------------------------------------------------
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM--------------------------------------------------------- 265 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l--------------------------------------------------------- 265 (408)
......++++||+ ++++|.+++
T Consensus 96 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~ 174 (314)
T 2ivs_A 96 SQDGPLLLIVEYA-KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR 174 (314)
T ss_dssp CSSSSCEEEEECC-TTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred ecCCceEEEEeec-CCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 7788889999999 877776543
Q ss_pred ccCccccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCc
Q 037624 266 IMKPLSWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGE 330 (408)
Q Consensus 266 ~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~ 330 (408)
++||.|+++++++.+||+|||+++......... ....||..| .++|||||||+++||+| |+.||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 168889999999999999999998765433222 233456666 68999999999999999 999986
Q ss_pred ccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
..... .+.+.+........ .......+.+++..||+.||++|++.
T Consensus 255 ~~~~~----------~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~ 299 (314)
T 2ivs_A 255 GIPPE----------RLFNLLKTGHRMER---PDNCSEEMYRLMLQCWKQEPDKRPVF 299 (314)
T ss_dssp TCCGG----------GHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCHH----------HHHHHhhcCCcCCC---CccCCHHHHHHHHHHccCChhhCcCH
Confidence 43211 01111111111100 01223456788899999999999543
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-25 Score=216.81 Aligned_cols=154 Identities=18% Similarity=0.167 Sum_probs=115.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD-- 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~-- 245 (408)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ......+.+.+|+.++. +|+|+++++++ +...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~----~~~~~~ 135 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNV----FTPQKT 135 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEE----ECSCCS
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEE----EccCCc
Confidence 35788899999999999999987 458899999997532 23345677889999987 78888888877 4332
Q ss_pred ----ccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeecccccc
Q 037624 246 ----ACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 246 ----~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++|+||+ +++ +...+ ++||.|++++.++++||+|||+|+.
T Consensus 136 ~~~~~~~~lv~E~~-~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 136 LEEFQDVYLVMELM-DAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp TTTCCEEEEEEECC-SEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred cccCCeEEEEEeCC-CCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 3568999998 554 32221 2799999999999999999999987
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.... ...+..+||.+| .++||||+||+++||++|+.||...
T Consensus 214 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 214 AGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp ---C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6433 233556788888 6899999999999999999999643
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=213.29 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=117.2
Q ss_pred HHHHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC--cchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 168 IEATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE--PASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 168 ~~at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
....++|...+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|++++. +|+|+++++++ +
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~ 81 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA----F 81 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEE----E
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEE----E
Confidence 344568999999999999999999984 58899999997532211 123457889999987 88888888887 6
Q ss_pred cCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
......++++||+ ++ ++..++. +||.|++++.++.+||+|||++
T Consensus 82 ~~~~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 82 GHKSNISLVFDFM-ET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CCTTCCEEEEECC-SE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eeCCceEEEEEcC-CC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 7777888999998 54 5544331 7899999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+.............||..| .++|||||||+++||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~ 215 (346)
T 1ua2_A 160 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG 215 (346)
T ss_dssp STTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 8875444344455677777 578999999999999999999864
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=207.25 Aligned_cols=195 Identities=23% Similarity=0.332 Sum_probs=143.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +++.||||.+...........+.+.+|++++. +|+|+++++++ +......
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 89 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY----FHDRKRI 89 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEE----EEcCCEE
Confidence 57889999999999999999985 57889999986532222233567899999987 78888888887 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||++.......
T Consensus 90 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 90 YLMLEFA-PRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp EEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEEEEeC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999 8888876652 78899999999999999999997654321
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.....||..| .++||||||++++||+||+.||...... .....+.......+ .
T Consensus 169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~--~-- 233 (284)
T 2vgo_A 169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT---------ETHRRIVNVDLKFP--P-- 233 (284)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHTTCCCCC--T--
T ss_pred --cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh---------HHHHHHhccccCCC--C--
Confidence 2334567666 6899999999999999999998643211 11122222222111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 234 -~~~~~~~~li~~~l~~~p~~Rps 256 (284)
T 2vgo_A 234 -FLSDGSKDLISKLLRYHPPQRLP 256 (284)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCC
T ss_pred -cCCHHHHHHHHHHhhcCHhhCCC
Confidence 11234567889999999999954
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-26 Score=233.57 Aligned_cols=190 Identities=17% Similarity=0.228 Sum_probs=135.5
Q ss_pred eeecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhh
Q 037624 178 YCFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
+.||+|+||.||+|.+. .++.||||+++... .+....++|.+|++++. +|+|+++++++ +.. ...++|+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~----~~~-~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGI----CEA-ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEE----EES-SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----Eec-CCEEEEE
Confidence 47999999999999763 46789999997642 33345678999999997 88888888887 544 4467999
Q ss_pred hhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCe--
Q 037624 253 TWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN-- 297 (408)
Q Consensus 253 e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~-- 297 (408)
||+ ++|+|.+++. +||.|++++.++.+||+|||+++........
T Consensus 449 E~~-~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 449 EMA-ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp ECC-TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred Ecc-CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999 8999887762 7899999999999999999999877543321
Q ss_pred -eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 298 -LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 298 -~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.+...||..| .++|||||||++|||+| |+.||..... . .+.+.+......+. +
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~---------~-~~~~~i~~~~~~~~---p 594 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---------S-EVTAMLEKGERMGC---P 594 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---------H-HHHHHHHTTCCCCC---C
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---------H-HHHHHHHcCCCCCC---C
Confidence 1233456666 68999999999999999 9999864321 1 11111111111110 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+...+.+++..||+.||++|++
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs 618 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPG 618 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcC
Confidence 123445778889999999999944
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-26 Score=210.71 Aligned_cols=196 Identities=21% Similarity=0.295 Sum_probs=145.5
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|...+.||+|+||.||+|+. .+++.||||.+..... ....+.+.+|+.++. +|+|+++++++ +......
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 95 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGS----YLKDTKL 95 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEE----EecCCeE
Confidence 4588889999999999999987 4688999999975432 234678999999987 78888888887 6677788
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.......
T Consensus 96 ~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 96 WIIMEYL-GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp EEEEECC-TTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred EEEEEeC-CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 9999999 8888877652 788999999999999999999987654433
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
......||..| .++|||||||+++||+||+.|+........ ...+.....+.+..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~------- 241 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV------LFLIPKNNPPTLEG------- 241 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCCS-------
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH------HHHhhcCCCCCCcc-------
Confidence 33445677766 689999999999999999999864321100 00011111122221
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.+|++|++
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps 264 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPT 264 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCC
T ss_pred ccCHHHHHHHHHHcCCChhhCcC
Confidence 11234668889999999999954
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=222.31 Aligned_cols=200 Identities=20% Similarity=0.284 Sum_probs=145.7
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|...+.||+|+||+||+|+.. +++.||||++...... ....+.+.+|++++. +|+|+++++++ +.....
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEI----LEDSSS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEE----EECSSE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEE----EEcCCE
Confidence 467999999999999999999984 6889999998653221 223577899999987 88888888888 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccc---cCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL---RELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~---~~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++++|.+++. +||.|++++ .++.+||+|||+++..
T Consensus 96 ~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 96 FYIVGELY-TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EEEEECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEEEEcC-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999 8888876552 789999995 5678999999999876
Q ss_pred CCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... ......||+.| .++||||+||++|||+||+.||..... ...+..+.......+.
T Consensus 175 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~~i~~~~~~~~~- 243 (486)
T 3mwu_A 175 QQNT-KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE---------YDILKRVETGKYAFDL- 243 (486)
T ss_dssp CCC-----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHTCCCSCS-
T ss_pred CCCC-ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCCC-
Confidence 4332 23445678777 689999999999999999999864321 1111122222111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+........+.+++..|++.+|++|++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dp~~R~t 270 (486)
T 3mwu_A 244 PQWRTISDDAKDLIRKMLTFHPSLRIT 270 (486)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSTTTSCC
T ss_pred cccCCCCHHHHHHHHHHcCCChhhCcC
Confidence 111122344668889999999999955
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-26 Score=213.72 Aligned_cols=200 Identities=16% Similarity=0.223 Sum_probs=143.3
Q ss_pred HHHhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
...++|...+.||+|+||.||+|+. .++..||||.+.... .....+.+.+|+.++. .|+|+++++++
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~-- 117 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGA-- 117 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEE--
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE--
Confidence 3457899999999999999999996 245689999997532 2334578999999886 68888888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhh------------------------------------------------------
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM------------------------------------------------------ 265 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------------------------------ 265 (408)
+......++++||+ ++|+|.+++
T Consensus 118 --~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 194 (344)
T 1rjb_A 118 --CTLSGPIYLIFEYC-CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194 (344)
T ss_dssp --ECSSSSCEEEEECC-TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred --EeeCCccEEEEecC-CCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 77788899999999 888876543
Q ss_pred --ccCccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCC
Q 037624 266 --IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQP 328 (408)
Q Consensus 266 --~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p 328 (408)
+++|.|++++.++.+||+|||+++........ .....||..| .++|||||||+++||+| |+.|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 16888899999999999999999876543322 2234566666 68999999999999998 9999
Q ss_pred CcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 329 GELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
|...... ......+......+... .....+.+++..||+.||++|++
T Consensus 275 ~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 275 YPGIPVD---------ANFYKLIQNGFKMDQPF---YATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp STTCCCS---------HHHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cccCCcH---------HHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCCchhCcC
Confidence 8643211 11112222211111101 12345678889999999999954
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-26 Score=207.14 Aligned_cols=194 Identities=22% Similarity=0.305 Sum_probs=142.0
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++. +|+|+++++++ +......+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~~ 79 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGV----CLEQAPIC 79 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT----BCHHHHHHHHHHHHTCCCTTBCCEEEE----ECSSSSCE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC----CCHHHHHHHHHHHHhCCCCCEeeEEEE----EccCCCeE
Confidence 5788889999999999999999888899999997532 23467999999987 88888888887 77788889
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++++|.+++. ++|.|++++.++.+||+|||+++......
T Consensus 80 lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 80 LVTEFM-EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp EEECCC-TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEEeCC-CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 999999 8888877662 78889999999999999999998753221
Q ss_pred Ce-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCC-CCCCccc
Q 037624 296 SN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDP-RLSPPVD 360 (408)
Q Consensus 296 ~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~ 360 (408)
.. .....||..| .++||||||++++||+| |+.||...... .....+... ....+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---------~~~~~i~~~~~~~~~-- 227 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLYKP-- 227 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---------HHHHHHHTTCCCCCC--
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---------HHHHHHhcCCcCCCC--
Confidence 10 1123344445 68999999999999999 89998643211 111111111 01000
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .....+.+++..||+.+|++|++.
T Consensus 228 ~---~~~~~l~~li~~~l~~~p~~Rps~ 252 (267)
T 3t9t_A 228 R---LASTHVYQIMNHCWRERPEDRPAF 252 (267)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred c---cCcHHHHHHHHHHccCChhhCcCH
Confidence 1 112346688899999999999543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=204.58 Aligned_cols=200 Identities=18% Similarity=0.224 Sum_probs=143.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC---cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE---PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|...+.||+|+||.||+|+.. +|+.||+|.+....... ....+.|.+|++++. +|+|+++++++ +...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~ 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDI----FENK 80 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE----EECS
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhe----ecCC
Confidence 57899999999999999999985 58899999997643221 124678999999987 88888888888 7777
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC----ceEEeecccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL----EAFVADFGMT 288 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~----~~ki~DfGla 288 (408)
...++++||+ ++++|.+++. ++|.|++++.++ .+||+|||++
T Consensus 81 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 81 TDVVLILELV-SGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp SEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CeEEEEEeec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 8889999999 8888887662 788899888766 8999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
+...... ......||..| .++||||||++++||+||+.||..... ......+......
T Consensus 160 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~ 229 (283)
T 3bhy_A 160 HKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK---------QETLTNISAVNYD 229 (283)
T ss_dssp EECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHHHTTCCC
T ss_pred eeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch---------HHHHHHhHhcccC
Confidence 8764332 22334567666 689999999999999999999864221 1111111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+. .........+.+++..|++.||++|++
T Consensus 230 ~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps 259 (283)
T 3bhy_A 230 FDE-EYFSNTSELAKDFIRRLLVKDPKRRMT 259 (283)
T ss_dssp CCH-HHHTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred Ccc-hhcccCCHHHHHHHHHHccCCHhHCcC
Confidence 100 111122345678889999999999955
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=215.25 Aligned_cols=155 Identities=14% Similarity=0.210 Sum_probs=124.1
Q ss_pred Hhhcccceeeccc--ceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 171 TEDFDIKYCFGTG--GYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 171 t~~f~~~~~iG~G--~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
.++|...+.||+| +||.||+|+.. +|+.||||++.... ......+.+.+|++++. +|+|+++++++ +..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNHPNIVPYRAT----FIAD 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEET
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhCCCCCCCcEeEE----EEEC
Confidence 3578899999999 99999999985 68999999997643 23345677888999987 88888888888 7778
Q ss_pred ccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++|+||+ ++|+|.+++. +||.|++++.++.+||+|||.+..
T Consensus 99 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 99 NELWVVTSFM-AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp TEEEEEEECC-TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred CEEEEEEEcc-CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 8899999999 8888877652 789999999999999999999865
Q ss_pred cCCCCCe-------eeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSSN-------LTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~~-------~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
....... .....||..| .++|||||||+++||+||+.||..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 4322111 1123455555 688999999999999999999864
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-26 Score=216.60 Aligned_cols=195 Identities=15% Similarity=0.188 Sum_probs=135.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcE----EEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKV----IALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~----vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||+||+|+.. +++. ||+|.+.... .....+.+.+|+.++. +|+|+++++++ +.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~- 85 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGL----CP- 85 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEE----EC-
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEE----Ec-
Confidence 46888899999999999999973 4543 7888875432 2233456778888886 88888888877 54
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+...++++||+ ++|+|.+++. +||.|++++.++++||+|||+++.
T Consensus 86 ~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 86 GSSLQLVTQYL-PLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp BSSEEEEEECC-TTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred CCccEEEEEeC-CCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 45577889999 8888877652 789999999999999999999998
Q ss_pred cCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .....||.+| .++|||||||++|||+| |+.||........ ...+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~~~ 238 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV------PDLLEKGERLAQ 238 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH------HHHHHTTCBCCC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH------HHHHHcCCCCCC
Confidence 7543322 2445677777 68999999999999999 9999864321100 000111001111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .+...+.+++..||+.||++|++
T Consensus 239 ~~-------~~~~~~~~li~~~l~~dp~~Rps 263 (325)
T 3kex_A 239 PQ-------ICTIDVYMVMVKCWMIDENIRPT 263 (325)
T ss_dssp CT-------TBCTTTTHHHHHHTCSCTTTSCC
T ss_pred CC-------cCcHHHHHHHHHHcCCChhhCcC
Confidence 10 11223567888999999999943
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-26 Score=210.60 Aligned_cols=199 Identities=15% Similarity=0.149 Sum_probs=139.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|+.++. .|+++++++++ +.....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~----~~~~~~ 80 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYF----GQEGLH 80 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEE----EEETTE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEee----cCCCce
Confidence 4688899999999999999996 568999999986432 2345667777665 78899999888 677778
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCc-----eEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELE-----AFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~-----~ki~DfGla 288 (408)
.++++||+ +++|.+++. +||.|++++.++. +||+|||++
T Consensus 81 ~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 81 NVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEEEECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred eEEEEEec--CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 88999998 566666542 7889999987665 999999999
Q ss_pred cccCCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 289 MHLYCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 289 ~~~~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
+....... ......||..| .++|||||||+++||+||+.||........ ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~------~~~~~~ 232 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN------KQKYER 232 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH------HHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc------HHHHHH
Confidence 87654322 12345788888 689999999999999999999875321110 001111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.......+...........+.+++..||+.+|++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~ 270 (298)
T 1csn_A 233 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPD 270 (298)
T ss_dssp HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred HHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCC
Confidence 11100000000111122345778889999999999954
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-26 Score=214.61 Aligned_cols=156 Identities=21% Similarity=0.218 Sum_probs=114.0
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
...++|...+.||+|+||+||+|+. .+++.||||++.... ......+.+.+|++++. +|+|++++.++ +..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~ 105 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKSV----IHHN 105 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEE----EEET
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc-cccccchhHHHHHHHHHHcCCCCcceEEEE----EecC
Confidence 3456899999999999999999987 468899999997543 22334567789999997 88888888887 7777
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccc-----cCCceEEeeccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL-----RELEAFVADFGM 287 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~-----~~~~~ki~DfGl 287 (408)
...++++||+ + |+|.+++. +||.|+++. +++.+||+|||+
T Consensus 106 ~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 106 HRLHLIFEYA-E-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp TEEEEEEECC-S-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred CEEEEEEecC-C-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 8889999998 5 47766552 789999984 556699999999
Q ss_pred ccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 288 TMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
++.............||..| .++|||||||+++||+||+.||..
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 240 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 98775443334445667666 689999999999999999999864
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-26 Score=215.19 Aligned_cols=152 Identities=19% Similarity=0.215 Sum_probs=112.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+.. +++.||||++..... ......+.+|++++. +|+|+++++++ +......
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 75 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDI----IHTEKSL 75 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEE----EECSSCE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeE----EeeCCEE
Confidence 46888899999999999999985 688999999975332 122334567888887 88888888887 7777888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ + |++.+++. +||.|++++.++.+||+|||+++.....
T Consensus 76 ~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 76 TLVFEYL-D-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EEEEECC-S-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred EEEeccc-c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9999998 5 45555431 7899999999999999999999876543
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........||..| .++|||||||+++||+||+.||..
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3333344556555 689999999999999999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=214.64 Aligned_cols=207 Identities=15% Similarity=0.169 Sum_probs=143.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--c
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--A 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--~ 246 (408)
+.|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|++++. +|+|+++++++ +... .
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~----~~~~~~~ 82 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAI----EEETTTR 82 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEE----EECTTTC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEe----eccCCCC
Confidence 46888899999999999999985 488999999975332 223567889999987 78888888776 4433 3
Q ss_pred cchhhhhhcccchhhhhhhc------------------------------------cCcccccc----ccCCceEEeecc
Q 037624 247 CFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIG----LRELEAFVADFG 286 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l----~~~~~~ki~DfG 286 (408)
..++++||+ ++|+|.+++. +||.|+++ +.++.+||+|||
T Consensus 83 ~~~lv~e~~-~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 83 HKVLIMEFC-PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp CEEEEECCC-TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred eeEEEEecC-CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 678999999 8888877652 68889988 677789999999
Q ss_pred cccccCCCCCeeeecccCCCC--------------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccc----
Q 037624 287 MTMHLYCDSSNLTLLAGTYGY--------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD---- 342 (408)
Q Consensus 287 la~~~~~~~~~~~~~~gt~~y--------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~---- 342 (408)
+++...... ......||..| .++|||||||++|||+||+.||.............
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GCEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 998764332 23345788888 26899999999999999999986322111000000
Q ss_pred --cc-ch---hhhc------cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 --QN-IM---LLDV------LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 --~~-~~---~~~~------~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .. +... .++.+.... .........+.+++..|++.||++|++
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~ll~~~L~~dP~~R~s 296 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGLQVLLTPVLANILEADQEKCWG 296 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHHHHHHHHHHHHHSCCCTTTSCC
T ss_pred cCCCcccchhheeccCCCcccCccCCccc-ccchHHHhhchHHHHHhhccChhhhcc
Confidence 00 00 0000 001111111 223455566778899999999999944
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=209.77 Aligned_cols=209 Identities=16% Similarity=0.232 Sum_probs=139.7
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeee-cCCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVC-IKDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~-~~~~ 246 (408)
++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++.. +|+|++++++...... ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc------chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 5788899999999999999988 6889999998642 2345555555532 8899988887654433 3344
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------------cCccccccccCCceEEeec
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
..++++||+ ++|+|.+++. +||.|++++.++.+||+||
T Consensus 86 ~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 86 EYLLVMEYY-PNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EEEEEECCC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred eEEEEEecC-CCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 678999999 8888876652 5788999999999999999
Q ss_pred ccccccCCCC--------CeeeecccCCCC-------------------cccchhhhhHHHHHHHhCCCCCcccccccCC
Q 037624 286 GMTMHLYCDS--------SNLTLLAGTYGY-------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS 338 (408)
Q Consensus 286 Gla~~~~~~~--------~~~~~~~gt~~y-------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~ 338 (408)
|+++...... .......||..| .++|||||||++|||+||+.|+.........
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 9998764321 112345688877 3689999999999999998876432221111
Q ss_pred cccc--------ccchhh-----hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 339 SSSD--------QNIMLL-----DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 339 ~~~~--------~~~~~~-----~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
.... ...... ....+.+.... .........+.+++..||+.||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQ 307 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchH
Confidence 0000 000000 11112222111 11123455688999999999999995543
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-26 Score=215.18 Aligned_cols=205 Identities=20% Similarity=0.213 Sum_probs=146.9
Q ss_pred cHHHHHHHHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCccee
Q 037624 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETL 234 (408)
Q Consensus 163 ~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l 234 (408)
..+++....++|...+.||+|+||.||+|+.. +++.||||.+... ........|.+|++++. +|+|++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 33445556778999999999999999999864 3678999999743 22334567999999997 88888888
Q ss_pred eeEeEeeecCCccchhhhhhcccchhhhhhhc-------------------------------------------cCccc
Q 037624 235 LSFMDFVCIKDACFWFMNTWRGEACSVFCTMI-------------------------------------------MKPLS 271 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------~k~~~ 271 (408)
+++ +......++++||+ ++++|.+++. ++|.|
T Consensus 94 ~~~----~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N 168 (322)
T 1p4o_A 94 LGV----VSQGQPTLVIMELM-TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN 168 (322)
T ss_dssp EEE----ECSSSSCEEEEECC-TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred EEE----EccCCccEEEEEeC-CCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccce
Confidence 887 77778889999999 8877766541 68889
Q ss_pred cccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCccccccc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLS 336 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~ 336 (408)
++++.++.+||+|||+++......... ....||..| .++|||||||+++||+| |+.|+.....
T Consensus 169 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-- 246 (322)
T 1p4o_A 169 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-- 246 (322)
T ss_dssp EEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--
T ss_pred EEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--
Confidence 999999999999999998764332111 223455555 68999999999999999 8899864211
Q ss_pred CCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+......... ......+.+++..||+.+|++|++
T Consensus 247 -------~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps 286 (322)
T 1p4o_A 247 -------EQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNPKMRPS 286 (322)
T ss_dssp -------HHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred -------HHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCCcccCcC
Confidence 1111222222221110 122334668889999999999943
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-26 Score=209.35 Aligned_cols=200 Identities=20% Similarity=0.237 Sum_probs=141.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|++++. +|+|++++++++. ......
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYDRII--DRTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--EGGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc-CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEe--cCCCce
Confidence 367889999999999999999984 68899999997533 23345677999999987 7888888777511 234567
Q ss_pred chhhhhhcccchhhhhhh------------------------------------------ccCccccccccCCceEEeec
Q 037624 248 FWFMNTWRGEACSVFCTM------------------------------------------IMKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l------------------------------------------~~k~~~~~l~~~~~~ki~Df 285 (408)
.++++||+ ++++|.+++ +++|.|++++.++.+||+||
T Consensus 82 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 82 LYIVMEYC-EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEEEECC-TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEEEeCC-CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 88999998 777776554 15778888999999999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~ 353 (408)
|+++.............||..| .++||||||++++||+||+.||...... .....+.+.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~i~~~ 231 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---------ELAGKIREG 231 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHT
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH---------HHHHHHhhc
Confidence 9998765443323345677777 5799999999999999999998643210 001111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..... .......+.+++..||+.+|++|++
T Consensus 232 ~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps 261 (279)
T 2w5a_A 232 KFRRI----PYRYSDELNEIITRMLNLKDYHRPS 261 (279)
T ss_dssp CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccccC----CcccCHHHHHHHHHHcCCCcccCCC
Confidence 11100 0012234668889999999999944
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=207.72 Aligned_cols=196 Identities=20% Similarity=0.276 Sum_probs=145.5
Q ss_pred HHhhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..++|...+.||+|+||.||+|+... +..||+|.+... ....+.|.+|++++. +|+|+++++++ +....
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~~~ 82 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREP 82 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEE----ECSSS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEE----EccCC
Confidence 45688899999999999999999854 888999999642 234678999999987 88888888888 77888
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 83 ~~~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 83 PFYIITEFM-TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp SEEEEEECC-TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred CEEEEEEcC-CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 889999999 8888877662 7889999999999999999999876
Q ss_pred CCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 292 YCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 292 ~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
...... .....||..| .++||||||++++||+| |+.||...... .+.+.+......
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----------~~~~~~~~~~~~ 231 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----------QVYELLEKDYRM 231 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----------GHHHHHHTTCCC
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----------HHHHHHhccCCC
Confidence 544322 2234455556 58999999999999999 99998643211 111111111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .......+.+++..|++.||++|++
T Consensus 232 ~~---~~~~~~~l~~li~~~l~~dp~~Rps 258 (288)
T 3kfa_A 232 ER---PEGCPEKVYELMRACWQWNPSDRPS 258 (288)
T ss_dssp CC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CC---CCCCCHHHHHHHHHHhCCChhhCcC
Confidence 00 0122345678889999999999944
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=216.31 Aligned_cols=153 Identities=24% Similarity=0.325 Sum_probs=116.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC--
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD-- 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~-- 245 (408)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|++++. +|+|+++++++ +...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~----~~~~~~ 99 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDL----IIPDDL 99 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEE----CCCSCT
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEE----EecCCC
Confidence 35788999999999999999997 458899999997532 33345678999999997 78887777776 4433
Q ss_pred ---ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccc
Q 037624 246 ---ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 246 ---~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
...++|+||+ + ++|..++. +||.|++++.++.+||+|||+|+
T Consensus 100 ~~~~~~~lv~e~~-~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 100 LKFDELYIVLEIA-D-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp TTCCCEEEEEECC-S-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CcCCeEEEEEecC-C-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 4678999988 4 46666542 79999999999999999999998
Q ss_pred ccCCCCC----------------------eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 290 HLYCDSS----------------------NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 290 ~~~~~~~----------------------~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
....... ..+..+||.+| .++|||||||+++||+||..|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 7653321 12456788888 68899999999999999766653
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=219.14 Aligned_cols=152 Identities=23% Similarity=0.265 Sum_probs=103.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-cCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC-IKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~-~~~~~ 247 (408)
++|...+.||+|+||+||+|+.. +|+.||||++... ..+....+.+.+|++++. +|+|++++++++.... .....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 67999999999999999999874 6889999999653 233345678999999997 7888887777621000 22246
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++|+||+ + ++|..++. +||.|++++.++++||+|||+|+.....
T Consensus 132 ~~lv~e~~-~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 132 LYVVLEIA-D-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp EEEEECCC-S-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred EEEEEecc-c-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 78899987 3 45555431 7999999999999999999999876422
Q ss_pred C---------------------------CeeeecccCCCC-------------cccchhhhhHHHHHHHhCC
Q 037624 295 S---------------------------SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGR 326 (408)
Q Consensus 295 ~---------------------------~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~ 326 (408)
. ...+..+||.+| .++|||||||+++||+||.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 1 112445788888 6899999999999999943
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=204.76 Aligned_cols=194 Identities=16% Similarity=0.247 Sum_probs=140.8
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|...+.||+|+||.||+|...+++.||||.+.... ...+.|.+|++++. +|+|+++++++ +. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~-~~~~ 82 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAV----VT-QEPI 82 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----EC-SSSC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc----ccHHHHHHHHHHHHhCCCcCcceEEEE----Ec-CCCc
Confidence 35788899999999999999999888899999997532 23578999999987 88888888776 44 3457
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||+ ++++|.+++. ++|.|+++++++.+||+|||+++....
T Consensus 83 ~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 83 YIITEYM-ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEEEECC-TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecC-CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 8899999 8888877652 788899999999999999999987654
Q ss_pred CCCee-eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 294 DSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 294 ~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
..... ....||..| .++|||||||+++||+| |+.||...... .....+... .....
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---------~~~~~~~~~-~~~~~ 231 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERG-YRMVR 231 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---------HHHHHHHTT-CCCCC
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---------HHHHHHhcc-cCCCC
Confidence 32211 223456666 58999999999999999 99998642211 111111111 11000
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..|++.+|++|++
T Consensus 232 ---~~~~~~~l~~li~~~l~~~p~~Rps 256 (279)
T 1qpc_A 232 ---PDNCPEELYQLMRLCWKERPEDRPT 256 (279)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ---cccccHHHHHHHHHHhccChhhCCC
Confidence 0112345678889999999999954
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-26 Score=213.80 Aligned_cols=198 Identities=15% Similarity=0.126 Sum_probs=139.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|++++. .|+|+++++++ +.....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~~h~~i~~~~~~----~~~~~~ 79 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-----RAPQLHLEYRFYKQLGSGDGIPQVYYF----GPCGKY 79 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-----SSCCHHHHHHHHHHHCSCTTSCCEEEE----EEETTE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-----chHHHHHHHHHHHHhhCCCCCCEEEEE----EecCCc
Confidence 5788899999999999999997 568899999986532 1346888888876 78888888877 666777
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCc-----eEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELE-----AFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~-----~ki~DfGla 288 (408)
.++++||+ +++|.+++. +||.|++++.++. +||+|||++
T Consensus 80 ~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 80 NAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEEEECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred cEEEEEeC--CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 88999998 456655441 7899999998777 999999999
Q ss_pred cccCCCCCe-------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 289 MHLYCDSSN-------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 289 ~~~~~~~~~-------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
+........ .....||..| .++|||||||+++||+||+.||....... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~------~~~~~~~ 231 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT------LKERYQK 231 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS------HHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc------HHHHHHH
Confidence 876443221 2356789888 58999999999999999999987432110 0001111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+.....+......... .+.+++..||+.+|.+|++
T Consensus 232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~ 268 (330)
T 2izr_A 232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPD 268 (330)
T ss_dssp HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCC
T ss_pred HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCC
Confidence 111111000000000122 6788899999999999944
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=206.64 Aligned_cols=196 Identities=16% Similarity=0.225 Sum_probs=137.1
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
+|.....||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++. +|+|+++++++ +......+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGS----FSENGFIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEE----EEETTEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeE----EEeCCcEE
Confidence 344556899999999999997 568899999997532 234577899999987 88888888887 67777888
Q ss_pred hhhhhcccchhhhhhhc------------------------------------cCcccccccc-CCceEEeecccccccC
Q 037624 250 FMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLR-ELEAFVADFGMTMHLY 292 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~-~~~~ki~DfGla~~~~ 292 (408)
+++||+ ++++|.+++. ++|.|++++. ++.+||+|||+++...
T Consensus 96 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 96 IFMEQV-PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EEEECC-SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEEEeC-CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 999999 8888776652 6788888886 8999999999998765
Q ss_pred CCCCeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 293 CDSSNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
..........||..| .++|||||||+++||+||+.||........ ...........+.+..
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~- 249 (295)
T 2clq_A 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA----AMFKVGMFKVHPEIPE- 249 (295)
T ss_dssp C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH----HHHHHHHHCCCCCCCT-
T ss_pred CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH----HHHhhccccccccccc-
Confidence 433223344566666 579999999999999999999864221100 0000001111222221
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 250 ------~~~~~~~~li~~~l~~dp~~Rps 272 (295)
T 2clq_A 250 ------SMSAEAKAFILKCFEPDPDKRAC 272 (295)
T ss_dssp ------TSCHHHHHHHHHTTCSSTTTSCC
T ss_pred ------cCCHHHHHHHHHHccCChhhCCC
Confidence 11234667889999999999954
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=215.65 Aligned_cols=157 Identities=24% Similarity=0.303 Sum_probs=111.3
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.++. .|+|++++++++. ....
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~--~~~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLR--ADND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--CTTS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEe--cCCC
Confidence 457899999999999999999997 568899999986532 23344567889999886 3888888877721 1233
Q ss_pred ccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
...++|+||+ + ++|...+. +||.|++++.++.+||+|||+|+....
T Consensus 84 ~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 84 RDVYLVFDYM-E-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp SCEEEEEECC-S-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred CEEEEEeccc-C-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 4678999999 5 45655441 799999999999999999999987532
Q ss_pred C---------------------CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 D---------------------SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~---------------------~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. ....+..+||.+| .++|||||||+++||+||+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 1 1112345677777 679999999999999999999964
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-25 Score=208.35 Aligned_cols=197 Identities=17% Similarity=0.228 Sum_probs=138.5
Q ss_pred Hhhcccce-eecccceeEEEEEEe---CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKY-CFGTGGYGSVYIAQL---TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~-~iG~G~~G~Vy~~~~---~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.++|...+ .||+|+||.||+|.. .+++.||||++.... .+....+.|.+|++++. +|+|+++++++ + .
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~-~ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGI----C-E 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEE----E-E
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEE----E-C
Confidence 35677777 899999999999965 346789999997542 23344678999999987 78888888777 5 4
Q ss_pred Cccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 89 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 89 AESWMLVMEMA-ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp SSSEEEEEECC-TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCCcEEEEEeC-CCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 55678999999 8888887652 7899999999999999999999877
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....||..| .++|||||||+++||+| |+.||...... .+...+....
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----------~~~~~~~~~~ 237 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----------EVTAMLEKGE 237 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----------HHHHHHHTTC
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----------HHHHHHHcCC
Confidence 5443322 223455666 58999999999999999 99998643211 0111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.... .......+.+++..||+.||++|++
T Consensus 238 ~~~~---~~~~~~~l~~li~~~l~~dp~~Rps 266 (291)
T 1xbb_A 238 RMGC---PAGCPREMYDLMNLCWTYDVENRPG 266 (291)
T ss_dssp CCCC---CTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCChhhCcC
Confidence 1100 0122345678889999999999954
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=210.93 Aligned_cols=204 Identities=16% Similarity=0.161 Sum_probs=143.0
Q ss_pred cccceeecccceeEEEEEEeC-----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC--
Q 037624 174 FDIKYCFGTGGYGSVYIAQLT-----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-- 244 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-- 244 (408)
|...+.||+|+||+||++.+. +++.||||++... ......+.|.+|++++. +|+|+++++++ +..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~ 106 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGC----CEDAG 106 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EEETT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEE----EecCC
Confidence 478899999999999998752 5789999999753 23345677999999987 88888888777 443
Q ss_pred Cccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccC
Q 037624 245 DACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
....++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++...
T Consensus 107 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 107 AASLQLVMEYV-PLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp TTEEEEEECCC-TTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred CceEEEEEecc-cCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 45678999999 8888887762 78999999999999999999998875
Q ss_pred CCCCe---eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc-----cCCccccccchhhhccC
Q 037624 293 CDSSN---LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL-----SSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 293 ~~~~~---~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~d 352 (408)
..... .....||..| .++|||||||+++||+||+.|+...... ...........+.+.++
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 44322 1234566666 6899999999999999999998632110 00000011111222222
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+. .......+.+++..||+.||++|++
T Consensus 266 ~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps 297 (318)
T 3lxp_A 266 RGERLPR---PDKCPAEVYHLMKNCWETEASFRPT 297 (318)
T ss_dssp TTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cccCCCC---CccccHHHHHHHHHHcCCCcccCcC
Confidence 2222111 1123345778889999999999944
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-26 Score=209.55 Aligned_cols=198 Identities=16% Similarity=0.228 Sum_probs=131.6
Q ss_pred hhcccceeecccceeEEEEEEeC--CCc--EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT--SSK--VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~--~g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|...+.||+|+||.||+|++. +++ .||||.++..........+.|.+|++++. +|+|+++++++ +..+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~ 93 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV----VLTP 93 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEE----ECSS
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEE----EccC
Confidence 57888999999999999999863 333 68999997644334456678999999987 78888888777 5544
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
. .++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 94 ~-~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 94 P-MKMVTELA-PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp S-CEEEEECC-TTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred C-ceeeEecc-cCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 4 67888998 8888876652 7899999999999999999999887
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....||..| .++|||||||+++||+| |+.||..... ......+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------~~~~~~~~~~~~ 242 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---------SQILHKIDKEGE 242 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHHHHHTSCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH---------HHHHHHHHccCC
Confidence 5443221 234566666 68999999999999999 9999864321 111112211111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. .......+.+++..||+.+|++|++
T Consensus 243 ~~~~---~~~~~~~l~~li~~~l~~~p~~Rps 271 (291)
T 1u46_A 243 RLPR---PEDCPQDIYNVMVQCWAHKPEDRPT 271 (291)
T ss_dssp CCCC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCC---CcCcCHHHHHHHHHHccCCcccCcC
Confidence 1110 0122345678889999999999944
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-26 Score=215.95 Aligned_cols=194 Identities=19% Similarity=0.276 Sum_probs=129.0
Q ss_pred hcccceeecccceeEEEEEEeC--CC--cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec-CC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT--SS--KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI-KD 245 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~--~g--~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~-~~ 245 (408)
.|...+.||+|+||.||+|+.. ++ ..||||.++.. .+....+.|.+|+.++. +|+|+++++++ +. .+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~----~~~~~ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGI----CLRSE 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEE----ECCCS
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEE----EEcCC
Confidence 4666789999999999999873 22 36899998642 33445678999999987 78888888776 54 34
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++|+|.+++. +||.|+++++++.+||+|||+++..
T Consensus 164 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 164 GSPLVVLPYM-KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp SCCEEEEECC-TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred CCeEEEEECC-CCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 5778999999 8888887762 7899999999999999999999876
Q ss_pred CCCCCe----eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCC
Q 037624 292 YCDSSN----LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 292 ~~~~~~----~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
...... .....||..| .++|||||||++|||+| |..||........ ...+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~---------~~~~~~~~ 313 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---------TVYLLQGR 313 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH---------HHHHHTTC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH---------HHHHHcCC
Confidence 432211 1234455566 68999999999999999 6677754321110 11111111
Q ss_pred -CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 -LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 -l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+ ..+...+.+++..||+.+|++|++
T Consensus 314 ~~~~p-----~~~~~~l~~li~~cl~~dp~~RPs 342 (373)
T 3c1x_A 314 RLLQP-----EYCPDPLYEVMLKCWHPKAEMRPS 342 (373)
T ss_dssp CCCCC-----TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCC-----CCCCHHHHHHHHHHcCCChhhCcC
Confidence 1111 112335678889999999999944
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=208.19 Aligned_cols=202 Identities=19% Similarity=0.234 Sum_probs=137.2
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCC-----CcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENE-----EPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
..++|...+.||+|+||.||+|+.. +++.||||.+...... .......+.+|++++. +|+|++++.++
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~---- 83 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF---- 83 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEE----
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeE----
Confidence 3468999999999999999999984 5889999998653211 1123456889999987 78888888777
Q ss_pred ecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC---ceEEeec
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL---EAFVADF 285 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~---~~ki~Df 285 (408)
+..+. .++++||+ ++++|.+++. ++|.|++++.++ .+||+||
T Consensus 84 ~~~~~-~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 84 FDAED-YYIVLELM-EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp EESSS-EEEEEECC-TTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred EcCCc-eEEEEecC-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 44443 78899999 8888876652 788999988554 4999999
Q ss_pred ccccccCCCCCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV 350 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 350 (408)
|+++...... ......||..| .++|||||||+++||+||+.||........ ....+
T Consensus 162 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~ 232 (322)
T 2ycf_A 162 GHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--------LKDQI 232 (322)
T ss_dssp TTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--------HHHHH
T ss_pred ccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--------HHHHH
Confidence 9998764321 12234566666 589999999999999999999864321110 00111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+...... ..........+.+++..|++.||++|++
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rps 268 (322)
T 2ycf_A 233 TSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFT 268 (322)
T ss_dssp HHTCCCCC-HHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HhCccccC-chhhhhcCHHHHHHHHHHcccCHhhCCC
Confidence 11111100 0111123445778889999999999944
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=214.01 Aligned_cols=151 Identities=23% Similarity=0.270 Sum_probs=122.7
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|... +++.||+|++... ......+.+.+|++++. +|+|+++++++ +..+...
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 106 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGA----FYSDGEI 106 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEE----EEETTEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc--cCHHHHHHHHHHHHHHHHCCCCCEEEEeEE----EEECCEE
Confidence 57889999999999999999985 6889999999753 23345678999999987 78888888877 6677888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.....
T Consensus 107 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 107 SICMEHM-DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp EEEECCC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EEEEECC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999 8888876652 6889999999999999999999765322
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......||..| .++|||||||+++||+||+.||..
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 12335678777 689999999999999999999863
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-25 Score=209.49 Aligned_cols=187 Identities=11% Similarity=0.095 Sum_probs=136.1
Q ss_pred HHhhcccceeecccceeEEEEEE------eCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c---cCCcceeeeEe
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQ------LTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P---KYDIETLLSFM 238 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~---~~n~~~l~~~~ 238 (408)
..++|...+.||+|+||+||+|. ..+++.||||++... ...++..|++++. + |+|++.++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~- 135 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSA- 135 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEE-
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhhee-
Confidence 35678899999999999999994 456889999998642 2456777777665 3 6666666666
Q ss_pred EeeecCCccchhhhhhcccchhhhhhhc--------------------------------------cCcccccccc----
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCTMI--------------------------------------MKPLSWIGLR---- 276 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------------~k~~~~~l~~---- 276 (408)
+......++|+||+ ++|+|.+++. +||.|++++.
T Consensus 136 ---~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 136 ---HLFQNGSVLVGELY-SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp ---EECSSCEEEEECCC-CSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred ---eecCCCcEEEEecc-CCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence 67777889999999 8898887762 7899999987
Q ss_pred -------CCceEEeecccccccCC--CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc
Q 037624 277 -------ELEAFVADFGMTMHLYC--DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL 335 (408)
Q Consensus 277 -------~~~~ki~DfGla~~~~~--~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~ 335 (408)
++.+||+|||+|+.+.. .....+..+||.+| .++|||||||++|||+||+.||......
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 291 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence 89999999999976542 22334567899998 6899999999999999999998532110
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP 385 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R 385 (408)
.. ..+..+... . ..+ .+.++...|++.+|.+|
T Consensus 292 --------~~----~~~~~~~~~--~-~~~---~~~~~~~~~l~~~p~~r 323 (365)
T 3e7e_A 292 --------EC----KPEGLFRRL--P-HLD---MWNEFFHVMLNIPDCHH 323 (365)
T ss_dssp --------EE----EECSCCTTC--S-SHH---HHHHHHHHHHCCCCTTC
T ss_pred --------ce----eechhcccc--C-cHH---HHHHHHHHHcCCCCCCc
Confidence 00 011111110 0 112 23456678999999999
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=204.31 Aligned_cols=197 Identities=19% Similarity=0.253 Sum_probs=138.2
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+.. +|+.||||.+...........+.+.+|++++. +|+|+++++++ +......
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~~ 86 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV----ISTPTDF 86 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEE----EecCCeE
Confidence 46888899999999999999985 68999999986533222234567889999886 88888888887 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++......
T Consensus 87 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 87 FMVMEYV-SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EEEEECC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EEEEecc-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999 8888877652 78899999999999999999998764332
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchh
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 362 (408)
......||..| .++||||||++++||+||+.||+..... .....+.......+ .
T Consensus 166 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~--~- 232 (276)
T 2h6d_A 166 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---------TLFKKIRGGVFYIP--E- 232 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCC--T-
T ss_pred -ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---------HHHHHhhcCcccCc--h-
Confidence 12233455555 5799999999999999999998642110 00111111111110 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 363 VVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 363 ~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..|++.||++|++.
T Consensus 233 --~~~~~l~~li~~~l~~~p~~Rps~ 256 (276)
T 2h6d_A 233 --YLNRSVATLLMHMLQVDPLKRATI 256 (276)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred --hcCHHHHHHHHHHccCChhhCCCH
Confidence 112346678899999999999553
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=211.17 Aligned_cols=195 Identities=19% Similarity=0.233 Sum_probs=134.2
Q ss_pred hcccceeecccceeEEEEEEeCC-----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS-----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~-----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
+|...+.||+|+||.||+|.... +..||||.+.... .......|.+|++++. +|+|+++++++ +...
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~ 118 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGV----ISKY 118 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE----ECSS
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEE----EecC
Confidence 45567899999999999998743 2369999997532 3334567999999987 88888888888 7778
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 119 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 119 KPMMIITEYM-ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp SSEEEEEECC-TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred CCcEEEEeCC-CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 8889999999 8888877662 7889999999999999999999876
Q ss_pred CCCCCe---eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSN---LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~---~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
...... .....||..| .++|||||||+++||+| |+.||..... ......+.+. .
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---------~~~~~~~~~~-~ 267 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---------HEVMKAINDG-F 267 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHHHHHTT-C
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH---------HHHHHHHHCC-C
Confidence 543211 1122345555 68999999999999999 9999863211 1111112111 1
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. .......+.+++..||+.+|++|++
T Consensus 268 ~~~~---~~~~~~~l~~li~~~l~~~p~~Rps 296 (333)
T 1mqb_A 268 RLPT---PMDCPSAIYQLMMQCWQQERARRPK 296 (333)
T ss_dssp CCCC---CTTCBHHHHHHHHHHTCSSTTTSCC
T ss_pred cCCC---cccCCHHHHHHHHHHcCCChhhCcC
Confidence 1100 0122345678889999999999944
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-25 Score=205.61 Aligned_cols=197 Identities=22% Similarity=0.298 Sum_probs=139.8
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..+.|+..+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|++++. +|+|+++++++ +....
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~ 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGS----YFKNT 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEE----EEETT
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEE----EEeCC
Confidence 4567999999999999999999985 48899999997532 2467899999987 78888888887 66777
Q ss_pred cchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 247 CFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
..++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++...
T Consensus 98 ~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 98 DLWIVMEYC-GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEEEECC-TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EEEEEeecC-CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 889999999 8888876652 78889999999999999999998765
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
..........||..| .++|||||||+++||+||+.||........ .........+....+
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~-- 248 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA------IFMIPTNPPPTFRKP-- 248 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCSSG--
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHhcCCCcccCCc--
Confidence 443333445677766 689999999999999999999864321110 000111111112111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+.+++..||+.||++|++
T Consensus 249 ---~~~~~~l~~li~~~l~~dp~~Rpt 272 (314)
T 3com_A 249 ---ELWSDNFTDFVKQCLVKSPEQRAT 272 (314)
T ss_dssp ---GGSCHHHHHHHHHHTCSCTTTSCC
T ss_pred ---ccCCHHHHHHHHHHccCChhhCcC
Confidence 112335668889999999999944
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=206.57 Aligned_cols=201 Identities=19% Similarity=0.212 Sum_probs=145.2
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCC------cchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEE------PASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~------~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
.++|...+.||+|+||.||+|+.. +|+.||||.+....... ....+.+.+|++++. .|+|+++++++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~--- 92 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT--- 92 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE---
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee---
Confidence 367889999999999999999984 58899999997533111 123467889999886 48898888888
Q ss_pred eecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeeccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGM 287 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGl 287 (408)
+..+...++++||+ ++++|.+++. ++|.|++++.++.+||+|||+
T Consensus 93 -~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 93 -YETNTFFFLVFDLM-KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp -EECSSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred -eccCCeEEEEEecc-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 77788899999999 8888887762 788999999999999999999
Q ss_pred ccccCCCCCeeeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
++...... ......||..| .++||||||++++||+||+.||...... .....
T Consensus 171 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~ 240 (298)
T 1phk_A 171 SCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---------LMLRM 240 (298)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHH
T ss_pred hhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---------HHHHH
Confidence 98765332 22334566555 4889999999999999999998642211 11111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.......+. .........+.+++..|++.||++|++
T Consensus 241 ~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps 277 (298)
T 1phk_A 241 IMSGNYQFGS-PEWDDYSDTVKDLVSRFLVVQPQKRYT 277 (298)
T ss_dssp HHHTCCCCCT-TTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred HhcCCcccCc-ccccccCHHHHHHHHHHccCCcccCCC
Confidence 1111111100 111122345778889999999999954
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-26 Score=210.40 Aligned_cols=206 Identities=17% Similarity=0.187 Sum_probs=141.3
Q ss_pred hhcccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+.|+..+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|++++. +|+|+++++++ +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~ 94 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGI----CTE 94 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEE----EEC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeE----Eec
Confidence 3578889999999999999984 468899999997543 2234578999999986 78888887777 444
Q ss_pred C--ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccc
Q 037624 245 D--ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 245 ~--~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
. ...++++||+ ++++|.+++. ++|.|++++.++.+||+|||++
T Consensus 95 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 95 DGGNGIKLIMEFL-PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp ---CCEEEEEECC-TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CCCceEEEEEEeC-CCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccc
Confidence 4 5678999999 8888887762 7899999999999999999999
Q ss_pred cccCCCCCe---eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc-----cCCccccccchhh
Q 037624 289 MHLYCDSSN---LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL-----SSSSSSDQNIMLL 348 (408)
Q Consensus 289 ~~~~~~~~~---~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~-----~~~~~~~~~~~~~ 348 (408)
+........ .....||..| .++|||||||+++||+||+.|+...... ...........+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 887554332 1334566666 5899999999999999999986422100 0000001111111
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+......+. .......+.+++..||+.||++|++
T Consensus 254 ~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps 289 (302)
T 4e5w_A 254 NTLKEGKRLPC---PPNCPDEVYQLMRKCWEFQPSNRTS 289 (302)
T ss_dssp HHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred HHHhccCCCCC---CCCCCHHHHHHHHHHcCCCCCCCCC
Confidence 11111111110 1122345678889999999999954
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=209.40 Aligned_cols=189 Identities=20% Similarity=0.360 Sum_probs=128.8
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++. +|+|+++++++ +.+ ..+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~--~~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGA----CLN--PVC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEB----CTT--TTE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEE----EcC--CcE
Confidence 47888899999999999999984 778999998642 24578999999987 78888888776 543 367
Q ss_pred hhhhhcccchhhhhhhc---------------------------------------cCccccccccCCc-eEEeeccccc
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------------MKPLSWIGLRELE-AFVADFGMTM 289 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------------~k~~~~~l~~~~~-~ki~DfGla~ 289 (408)
+++||+ ++++|.+++. +||.|++++.++. +||+|||+++
T Consensus 76 lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 76 LVMEYA-EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154 (307)
T ss_dssp EEEECC-TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred EEEEcC-CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence 889998 7777766542 5778888887775 7999999998
Q ss_pred ccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 290 HLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 290 ~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
..... .....||..| .++|||||||+++||+||+.||+....... ...........+....
T Consensus 155 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~ 227 (307)
T 2eva_A 155 DIQTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF----RIMWAVHNGTRPPLIK 227 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH----HHHHHHHTTCCCCCBT
T ss_pred ccccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH----HHHHHHhcCCCCCccc
Confidence 65422 2234578777 689999999999999999999864311000 0000001111111111
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 228 -------~~~~~l~~li~~~l~~dp~~Rps 250 (307)
T 2eva_A 228 -------NLPKPIESLMTRCWSKDPSQRPS 250 (307)
T ss_dssp -------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred -------ccCHHHHHHHHHHhcCChhhCcC
Confidence 12234668889999999999943
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-26 Score=212.70 Aligned_cols=209 Identities=19% Similarity=0.262 Sum_probs=140.0
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeE
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSF 237 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~ 237 (408)
+.+.++....+.|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++. +|+|+++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 34445556778899999999999999999998 568899999986532 23467889988876 68888888777
Q ss_pred eEeee--cCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCce
Q 037624 238 MDFVC--IKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEA 280 (408)
Q Consensus 238 ~~~~~--~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ 280 (408)
+.... ......++++||+ ++++|.+++. ++|.|++++.++.+
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFC-GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp EEECC--CCCCEEEEEEECC-TTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred EeeccCccccceEEEEEEcC-CCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCE
Confidence 32110 1145778999999 8888776652 68889999999999
Q ss_pred EEeecccccccCCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccc
Q 037624 281 FVADFGMTMHLYCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 281 ki~DfGla~~~~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 343 (408)
||+|||+++.............||..| .++|||||||++|||+||+.||........
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------ 242 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------ 242 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH------
Confidence 999999998764332222334566555 579999999999999999999864321110
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.....+..... .....+.+++..||+.||++|++
T Consensus 243 ~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps 280 (326)
T 2x7f_A 243 LFLIPRNPAPRLKSK------KWSKKFQSFIESCLVKNHSQRPA 280 (326)
T ss_dssp HHHHHHSCCCCCSCS------CSCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHhhcCccccCCcc------ccCHHHHHHHHHHhccChhhCCC
Confidence 000111111111111 11234667888999999999954
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-25 Score=206.70 Aligned_cols=159 Identities=20% Similarity=0.185 Sum_probs=117.8
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccC--CCcchhhHHHHHHHHhc-----ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWEN--EEPASTRSFQNEVDILY-----PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~ 241 (408)
.+++|...+.||+|+||+||+|+. .+|+.||||++..... ........+.+|++++. .|+|++++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999997 5688999999975332 11223356777877765 499999888873221
Q ss_pred ecC-Cccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeec
Q 037624 242 CIK-DACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 242 ~~~-~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
... ....++++||+ + ++|.+++. +||.|++++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 87 RTDREIKVTLVFEHV-D-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CSSSEEEEEEEEECC-C-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCCceeEEEEehhh-h-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 111 11467888888 4 46655441 7899999999999999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+++...... ......||..| .++|||||||+++||+||+.||..
T Consensus 165 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 221 (308)
T 3g33_A 165 GLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 221 (308)
T ss_dssp SCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred ccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 9998764332 23456788888 689999999999999999999864
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-26 Score=216.02 Aligned_cols=210 Identities=11% Similarity=0.066 Sum_probs=134.6
Q ss_pred HHhhcccceeecccceeEEEEEEeCC------CcEEEEEecccccCCCc--------chhhHHHHHHHHhc--ccCCcce
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTS------SKVIALKKLHHWENEEP--------ASTRSFQNEVDILY--PKYDIET 233 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~~--------~~~~~~~~E~~~l~--~~~n~~~ 233 (408)
.+++|...+.||+|+||.||+|.... ++.||||.+........ .....+..|+..+. +|+|+++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34589999999999999999999854 47899999864221000 00011222333332 5788888
Q ss_pred eeeEeEeeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccc--cC
Q 037624 234 LLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL--RE 277 (408)
Q Consensus 234 l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~--~~ 277 (408)
++++...........++++||+ +++|.+++. +||.|++++ .+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~--g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE--EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred EEeeeeeccCCcceEEEEEeCC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence 8777332122235578999998 567766552 799999998 88
Q ss_pred CceEEeecccccccCCCCCe-------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCC
Q 037624 278 LEAFVADFGMTMHLYCDSSN-------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSS 338 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~-------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~ 338 (408)
+.+||+|||+++.+...... .....||..| .++|||||||++|||+||+.||.........
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~ 270 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY 270 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence 99999999999876433211 1334588888 6899999999999999999999742111000
Q ss_pred ---ccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 339 ---SSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 339 ---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+.+++++.+... .....+.+++..||+.+|++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~RP~ 316 (364)
T 3op5_A 271 VRDSKIRYRENIASLMDKCFPAA------NAPGEIAKYMETVKLLDYTEKPL 316 (364)
T ss_dssp HHHHHHHHHHCHHHHHHHHSCTT------CCCHHHHHHHHHHHTCCTTCCCC
T ss_pred HHHHHHHhhhhHHHHHHHhcccc------cCHHHHHHHHHHHhcCCCCCCCC
Confidence 00001111223333332211 11345678888999999999944
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=208.03 Aligned_cols=198 Identities=22% Similarity=0.269 Sum_probs=137.3
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.|.+|++++. +|+|+++++++ +.....
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 90 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGA----YYHDGK 90 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEE----EECC-C
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeee----eeeCCe
Confidence 357888999999999999999985 58899999987532 234678999999987 88998888888 777788
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ +++++..++. ++|.|++++.++.+||+|||++.....
T Consensus 91 ~~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 91 LWIMIEFC-PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EEEEEECC-TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEEEEEeC-CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 89999999 8888876541 788999999999999999999764321
Q ss_pred CCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 294 DSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 294 ~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
.........||..| .++|||||||+++||+||+.|+........ .........+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~ 243 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSDPPTLL 243 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCS
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH------HHHHhccCCcccC
Confidence 11111223444444 589999999999999999999864321110 0001111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .......+.+++..||+.||++|++
T Consensus 244 ~-----~~~~~~~l~~li~~~l~~dp~~Rps 269 (302)
T 2j7t_A 244 T-----PSKWSVEFRDFLKIALDKNPETRPS 269 (302)
T ss_dssp S-----GGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred C-----ccccCHHHHHHHHHHcccChhhCCC
Confidence 1 1122334668889999999999944
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=211.15 Aligned_cols=197 Identities=16% Similarity=0.210 Sum_probs=141.9
Q ss_pred HhhcccceeecccceeEEEEEEeC--------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeE
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT--------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMD 239 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~ 239 (408)
.++|...+.||+|+||.||+|+.. ++..||||++... ......+.+.+|++++. +|+|+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~-- 109 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-- 109 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE--
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC--CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEE--
Confidence 468889999999999999999873 4678999999753 23344677899999886 78898888888
Q ss_pred eeecCCccchhhhhhcccchhhhhhh-------------------------------------------------ccCcc
Q 037624 240 FVCIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPL 270 (408)
Q Consensus 240 ~~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~ 270 (408)
+......++++||+ ++++|.+++ ++||.
T Consensus 110 --~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~ 186 (334)
T 2pvf_A 110 --CTQDGPLYVIVEYA-SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186 (334)
T ss_dssp --ECSSSCCEEEEECC-TTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred --EccCCceEEEEECC-CCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccc
Confidence 77888899999999 888876653 16888
Q ss_pred ccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~ 335 (408)
|++++.++.+||+|||+++......... ....||..| .++|||||||+++||+| |+.||......
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 266 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH
Confidence 8899999999999999998765433221 233456666 68999999999999999 99998643210
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. ...+.....+.... .....+.+++..||+.+|++|++
T Consensus 267 ~~------~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps 305 (334)
T 2pvf_A 267 EL------FKLLKEGHRMDKPA-------NCTNELYMMMRDCWHAVPSQRPT 305 (334)
T ss_dssp HH------HHHHHHTCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HH------HHHHhcCCCCCCCc-------cCCHHHHHHHHHHccCChhhCcC
Confidence 00 00011111111111 12335678889999999999944
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=210.18 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=144.1
Q ss_pred cHHHHHHHHhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcce
Q 037624 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIET 233 (408)
Q Consensus 163 ~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~ 233 (408)
...+.....++|...+.||+|+||.||+|+. .+++.||||.+... ......+.+.+|++++. +|+|+++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC--CCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 3344555568899999999999999999984 34678999999753 22334567899999886 5788887
Q ss_pred eeeEeEeeecC-Cccchhhhhhcccchhhhhhh-----------------------------------------------
Q 037624 234 LLSFMDFVCIK-DACFWFMNTWRGEACSVFCTM----------------------------------------------- 265 (408)
Q Consensus 234 l~~~~~~~~~~-~~~~~lv~e~~~~~g~l~~~l----------------------------------------------- 265 (408)
++++ +.. +...++++||+ ++++|.+++
T Consensus 96 ~~~~----~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~ 170 (316)
T 2xir_A 96 LLGA----CTKPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 170 (316)
T ss_dssp EEEE----ECCTTSCCEEEEECC-TTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEE----EecCCCceEEEEEcC-CCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 7776 544 44588999999 887776553
Q ss_pred --ccCccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCC
Q 037624 266 --IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQP 328 (408)
Q Consensus 266 --~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p 328 (408)
+++|.|++++.++++||+|||+++........ .....||..| .++|||||||+++||+| |+.|
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p 250 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCC
Confidence 16788888999999999999999876543322 2234566666 68999999999999999 9999
Q ss_pred CcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 329 GELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
|........ ....+.......... .....+.+++..||+.+|++|++
T Consensus 251 ~~~~~~~~~-----~~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps 297 (316)
T 2xir_A 251 YPGVKIDEE-----FCRRLKEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPT 297 (316)
T ss_dssp STTCCCSHH-----HHHHHHHTCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CcccchhHH-----HHHHhccCccCCCCC-------CCCHHHHHHHHHHcCCChhhCcC
Confidence 864321100 000011111111111 11234668889999999999954
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=210.49 Aligned_cols=195 Identities=16% Similarity=0.271 Sum_probs=131.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcE----EEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKV----IALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~----vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||.||+|+.. +++. ||+|.+... ......+.+.+|+.++. +|+|+++++++ +..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGI----CLT 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCCBTTBCCCCEE----EES
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCCCCCeeEEEEE----Eec
Confidence 57888999999999999999973 4543 577777542 23345678999999997 88888888887 555
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+. .+++++|+ ++|+|.+++. +||.|++++.++.+||+|||+++.
T Consensus 89 ~~-~~~v~~~~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 89 ST-VQLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEECCC-SSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CC-ceEEEEec-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 44 56677888 7787776652 789999999999999999999987
Q ss_pred cCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .....||..| .++|||||||++|||+| |+.||...... .+...+....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----------~~~~~~~~~~ 236 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----------EISSILEKGE 236 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----------GHHHHHHTTC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----------HHHHHHHcCC
Confidence 6433222 1233455556 68999999999999999 99998643211 1112221111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+. .......+.+++..||+.||++|++
T Consensus 237 ~~~~---~~~~~~~l~~li~~~l~~dp~~Rps 265 (327)
T 3lzb_A 237 RLPQ---PPICTIDVYMIMRKCWMIDADSRPK 265 (327)
T ss_dssp CCCC---CTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCC---CccCCHHHHHHHHHHcCCChhHCcC
Confidence 1110 0112334678889999999999944
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-26 Score=212.36 Aligned_cols=207 Identities=19% Similarity=0.223 Sum_probs=143.7
Q ss_pred hhcccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||.||+|++ .+++.||||++... .....+.|.+|++++. +|+|++++.++.. ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~ 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSY--GPG 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEe--cCC
Confidence 5788899999999999999984 45889999999752 3344567999999986 7777777776611 224
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++++||+ ++++|.+++. +||.|++++.++.+||+|||+++.
T Consensus 98 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 98 RQSLRLVMEYL-PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp SCEEEEEEECC-TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred CceEEEEEeec-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence 56688999999 8888877652 789999999999999999999987
Q ss_pred cCCCCCee---eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccc-----cCCccccccchhhhc
Q 037624 291 LYCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSL-----SSSSSSDQNIMLLDV 350 (408)
Q Consensus 291 ~~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~ 350 (408)
........ ....||..| .++|||||||+++||+||+.|+...... ...........+.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 75443221 234566666 6899999999999999999997532110 000000000111222
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+......+. .......+.+++..||+.||++|++
T Consensus 257 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps 290 (327)
T 3lxl_A 257 LEEGQRLPA---PPACPAEVHELMKLCWAPSPQDRPS 290 (327)
T ss_dssp HHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhcccCCCC---CCcccHHHHHHHHHHcCCChhhCcC
Confidence 222222111 1123345778889999999999944
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-25 Score=204.36 Aligned_cols=207 Identities=16% Similarity=0.258 Sum_probs=139.2
Q ss_pred hhccc-ceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 172 EDFDI-KYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 172 ~~f~~-~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
+.|.. .+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++. +|+|+++++++ +....
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~----~~~~~ 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEF----FEEED 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEE----EEETT
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEE----EeeCC
Confidence 34555 36799999999999997 468899999997532 234577899999885 68888888887 67778
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCc---eEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELE---AFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~---~ki~DfGla~~ 290 (408)
..++++||+ ++++|.+++. +||.|++++.++. +||+|||+++.
T Consensus 85 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 85 RFYLVFEKM-RGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEEEEEEcC-CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 899999999 8888877662 7889999986665 99999999986
Q ss_pred cCCCCC-------eeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCcccc----
Q 037624 291 LYCDSS-------NLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD---- 342 (408)
Q Consensus 291 ~~~~~~-------~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~---- 342 (408)
...... ......||..| .++|||||||+++||+||+.||.........+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 11234578777 47899999999999999999996532211100000
Q ss_pred --ccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 343 --QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 343 --~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.......+. .........+.+++..|++.||++|++
T Consensus 244 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps 289 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPD-KDWAHISCAAKDLISKLLVRDAKQRLS 289 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred hHHHHHHHHHhccCcccCc-hhcccCCHHHHHHHHHHhhCChhhCCC
Confidence 01111222222222110 111122345778899999999999954
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-25 Score=205.12 Aligned_cols=197 Identities=17% Similarity=0.269 Sum_probs=140.9
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|++++. +|+|++++.++ +.....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 80 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDI----YESTTH 80 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEE----EECSSE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhh----cccCCE
Confidence 467899999999999999999984 688999999975322 22456889999887 88888888887 777788
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCcccccc---ccCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIG---LRELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l---~~~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++++|.+++. ++|.|+++ ++++.+||+|||+++..
T Consensus 81 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 81 YYLVMQLV-SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EEEEECCC-CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEEEEcC-CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 89999999 8888876652 78899988 67899999999999865
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
... ......||..| .++|||||||+++||+||+.||...... .....+.......+.
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~i~~~~~~~~~ 228 (304)
T 2jam_A 160 QNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---------KLFEKIKEGYYEFES 228 (304)
T ss_dssp CCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---------HHHHHHHHCCCCCCT
T ss_pred CCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHcCCCCCCc
Confidence 322 12334577776 5899999999999999999998642211 111111111111000
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~dp~~Rps 255 (304)
T 2jam_A 229 -PFWDDISESAKDFICHLLEKDPNERYT 255 (304)
T ss_dssp -TTTTTSCHHHHHHHHHHHCSSTTTSCC
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcC
Confidence 001112335668889999999999944
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=205.24 Aligned_cols=195 Identities=18% Similarity=0.230 Sum_probs=139.7
Q ss_pred hhcccce-eecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKY-CFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~-~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|.... .||+|+||.||+|+.. ++..||||.++.. ......+.+.+|++++. +|+|+++++++ + ..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~-~~ 81 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGV----C-QA 81 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----E-ES
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEE----e-cC
Confidence 3555555 8999999999999863 5778999999753 23345678999999987 78888888877 5 34
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++..
T Consensus 82 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 82 EALMLVMEMA-GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp SSEEEEEECC-TTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeC-CCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 5578999999 8888887662 7889999999999999999999877
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....||..| .++|||||||+++||+| |+.||........ ...+.....+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~~i~~~~~~~~ 234 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------MAFIEQGKRMEC 234 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH------HHHHHTTCCCCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH------HHHHhcCCcCCC
Confidence 5433221 223456666 68999999999999999 9999864321100 000111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. .....+.+++..||+.+|++|++
T Consensus 235 ~~-------~~~~~l~~li~~~l~~~p~~Rps 259 (287)
T 1u59_A 235 PP-------ECPPELYALMSDCWIYKWEDRPD 259 (287)
T ss_dssp CT-------TCCHHHHHHHHHTTCSSGGGSCC
T ss_pred CC-------CcCHHHHHHHHHHcCCChhhCcC
Confidence 11 22345678889999999999944
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-25 Score=205.03 Aligned_cols=198 Identities=18% Similarity=0.195 Sum_probs=125.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHH-HHhc--ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEV-DILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~-~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... .......+..|. ..+. .|+|+++++++ +..+.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~----~~~~~ 79 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--NSQEQKRLLMDLDISMRTVDCPFTVTFYGA----LFREG 79 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----CHHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EECSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc--CcHHHHHHHHHHHHHHHhCCCCeEEEEeee----eeccC
Confidence 46789999999999999999998 568899999997532 112223333343 3343 78888888887 77777
Q ss_pred cchhhhhhcccchhhhhhh--------------------------------------ccCccccccccCCceEEeecccc
Q 037624 247 CFWFMNTWRGEACSVFCTM--------------------------------------IMKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l--------------------------------------~~k~~~~~l~~~~~~ki~DfGla 288 (408)
..++++||+ ++ ++.+++ ++||.|++++.++.+||+|||++
T Consensus 80 ~~~lv~e~~-~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 80 DVWICMELM-DT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157 (290)
T ss_dssp SEEEEEECC-SE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred CEEEEEehh-cc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCc
Confidence 889999998 53 443322 17889999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC
Q 037624 289 MHLYCDSSNLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
+...... ......||..| .++|||||||+++||+||+.||+.... ....+.....
T Consensus 158 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~ 228 (290)
T 3fme_A 158 GYLVDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--------PFQQLKQVVE 228 (290)
T ss_dssp -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC--------HHHHHHHHHH
T ss_pred ccccccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc--------hHHHHHHHhc
Confidence 8764332 12233566666 478999999999999999999863211 1111112221
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
....... .......+.+++..|++.||++|++.
T Consensus 229 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~ 261 (290)
T 3fme_A 229 EPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTY 261 (290)
T ss_dssp SCCCCCC---TTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCcc---cccCCHHHHHHHHHHhhcChhhCcCH
Confidence 1111100 01123346788899999999999553
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=207.97 Aligned_cols=153 Identities=18% Similarity=0.182 Sum_probs=110.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC---
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--- 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--- 245 (408)
++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.++. +|+|+++++++ +...
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~----~~~~~~~ 99 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNV----FTPQKSL 99 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEE----ECSCCST
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEe----ecccccc
Confidence 5788899999999999999987 458899999997532 23344567889999986 78888888777 4333
Q ss_pred ---ccchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 246 ---ACFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ---~~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++ ++.+.+ ++||.|++++.++.+||+|||+++..
T Consensus 100 ~~~~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 100 EEFQDVYIVMELM-DA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp TTCCEEEEEEECC-SE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ccccceEEEEEcC-CC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 2678999998 53 444433 17999999999999999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.... ......||..| .++|||||||+++||+||+.||...
T Consensus 178 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 178 GTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 4321 23345678777 6899999999999999999998643
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-25 Score=205.22 Aligned_cols=196 Identities=16% Similarity=0.182 Sum_probs=133.1
Q ss_pred hcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC-
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD- 245 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~- 245 (408)
.|...+.||+|+||+||+|+..+ +..||+|.+... ......+.|.+|++++. +|+|+++++++ +...
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~ 95 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGI----MLPPE 95 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEE----ECCSS
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEE----EecCC
Confidence 35556889999999999998632 237999998742 23345678999999987 78888888777 5444
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ .+++|.+++. +||.|+++++++.+||+|||+++..
T Consensus 96 ~~~~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 96 GLPHVLLPYM-CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp SCCEEEECCC-TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred CCcEEEEecc-cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 4448899998 8888877662 7889999999999999999999865
Q ss_pred CCCC----CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDS----SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~----~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
.... .......||..| .++|||||||+++||+||..|+..... ...+...+....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~---------~~~~~~~~~~~~ 245 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID---------PFDLTHFLAQGR 245 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---------GGGHHHHHHTTC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC---------HHHHHHHhhcCC
Confidence 4321 111233455555 689999999999999996666432111 001111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+... .....+.+++..||+.+|++|++
T Consensus 246 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rps 274 (298)
T 3pls_A 246 RLPQPE---YCPDSLYQVMQQCWEADPAVRPT 274 (298)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCCc---cchHHHHHHHHHHccCChhhCcC
Confidence 110001 12234678889999999999954
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-25 Score=202.82 Aligned_cols=205 Identities=15% Similarity=0.210 Sum_probs=135.7
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|...+.||+|+||.||+|.. .|+.||||.++... ..+.|.+|++++. +|+|+++++++ +.......
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~---~~~~~~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGV---IVEEKGGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEE---ECCC--CC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEE---EEcCCCce
Confidence 35788899999999999999998 48899999986422 3578999999996 77777777766 23344578
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++....
T Consensus 91 ~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 91 YIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp EEEECCC-TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EEEEecC-CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 8999999 8888876652 788999999999999999999986543
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.. ....+|..| .++||||||++++||+| |+.||...... .....+. .......
T Consensus 170 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---------~~~~~~~-~~~~~~~- 235 (278)
T 1byg_A 170 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---------DVVPRVE-KGYKMDA- 235 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---------GHHHHHT-TTCCCCC-
T ss_pred cc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---------HHHHHHh-cCCCCCC-
Confidence 21 223456666 68999999999999999 99998643211 0011111 1111100
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHhhh
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRNQ 401 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~~~ 401 (408)
.......+.+++..||+.||++|++.......++.++..
T Consensus 236 --~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 236 --PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 012234566888999999999995543333333444433
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-25 Score=204.46 Aligned_cols=196 Identities=17% Similarity=0.156 Sum_probs=136.3
Q ss_pred HhhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
.++|...+.||+|+||.||+|+..+ +..||||.+.... .....+.|.+|++++. +|+|+++++++ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----~~~ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGI----IEE 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEE----ECS
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEE----EcC
Confidence 4678889999999999999998643 3469999987532 2335678999999987 88888888877 444
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.
T Consensus 85 -~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 85 -EPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp -SSCEEEEECC-TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred -CCCEEEEecC-CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 3457889999 8888876662 788999999999999999999987
Q ss_pred cCCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 291 LYCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 291 ~~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
....... .....||..| .++|||||||+++||+| |+.||........ ...+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~------~~~~~~~~~~~~~ 236 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGDRLPKP 236 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH------HHHHHHTCCCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH------HHHHhcCCCCCCC
Confidence 6433211 2233455556 67999999999999999 9999863211100 0001111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++..||+.+|++|++
T Consensus 237 ~-------~~~~~l~~li~~~l~~~p~~Rps 260 (281)
T 3cc6_A 237 D-------LCPPVLYTLMTRCWDYDPSDRPR 260 (281)
T ss_dssp T-------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred C-------CCCHHHHHHHHHHccCCchhCcC
Confidence 1 12234668889999999999944
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-25 Score=208.70 Aligned_cols=207 Identities=19% Similarity=0.232 Sum_probs=142.3
Q ss_pred hhcccceeecccceeEEEEEEe-----CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||.||+|++ .+|+.||||++... .....+.|.+|++++. +|+|++++.++ +..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~ 113 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGV----CYS 113 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEE----ECC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEE----EEe
Confidence 4688889999999999999984 46889999999752 3345678999999997 78888887776 443
Q ss_pred C--ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccc
Q 037624 245 D--ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 245 ~--~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
. ...++++||+ ++++|.+++. ++|.|++++.++.+||+|||++
T Consensus 114 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 114 AGRRNLKLIMEYL-PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp ----CCEEEECCC-TTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred cCCCceEEEEECC-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence 3 3678999999 8888877652 7889999999999999999999
Q ss_pred cccCCCCCee---eecccCCCC------------cccchhhhhHHHHHHHhCCCCCccccc-c----cCCc-cccccchh
Q 037624 289 MHLYCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSS-L----SSSS-SSDQNIML 347 (408)
Q Consensus 289 ~~~~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~-~----~~~~-~~~~~~~~ 347 (408)
+......... ....||..| .++|||||||+++||+||+.|+..... . .... .......+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 8875443221 223455555 689999999999999999998753210 0 0000 00000011
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCCc
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKP 389 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~ 389 (408)
.+.+......+. .......+.+++..||+.||++|++..
T Consensus 273 ~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ 311 (326)
T 2w1i_A 273 IELLKNNGRLPR---PDGCPDEIYMIMTECWNNNVNQRPSFR 311 (326)
T ss_dssp HHHHHTTCCCCC---CTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHhhcCCCCCC---CCcccHHHHHHHHHHcCCChhhCcCHH
Confidence 222222111110 112334577888999999999995533
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-25 Score=211.17 Aligned_cols=167 Identities=13% Similarity=0.162 Sum_probs=120.9
Q ss_pred ccHHHHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCC--------cchhhHHHHHHHHhc--ccCCc
Q 037624 162 FVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE--------PASTRSFQNEVDILY--PKYDI 231 (408)
Q Consensus 162 ~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~--------~~~~~~~~~E~~~l~--~~~n~ 231 (408)
....++....++|...+.||+|+||.||+|...+|+.||||++....... ....+.+.+|++++. +|+|+
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34567888899999999999999999999999889999999996543221 112367899999987 88888
Q ss_pred ceeeeEeEeee-cCCccchhhhhhcccchhhhhhhc----------------------------------cCcccccccc
Q 037624 232 ETLLSFMDFVC-IKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLR 276 (408)
Q Consensus 232 ~~l~~~~~~~~-~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~ 276 (408)
+++++++.... ......++++||+ + |++.+.+. ++|.|++++.
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELM-R-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECC-S-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred cceeeeEEeccCCCcceEEEEEccC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC
Confidence 88888732211 2334578999998 5 45554431 7899999999
Q ss_pred CCceEEeecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 277 ~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
++.+||+|||+++...... ......||..| .++|||||||+++||+||+.||..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 236 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236 (362)
T ss_dssp TCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence 9999999999998653322 22334555555 679999999999999999999864
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-25 Score=207.58 Aligned_cols=203 Identities=19% Similarity=0.273 Sum_probs=133.3
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeE
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMD 239 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~ 239 (408)
++....++|...+.||+|+||.||+|... .+..||||.+.... ......+.|.+|+.++. +|+|+++++++
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~-- 104 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGV-- 104 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEE--
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcCCCCCeeeeeEE--
Confidence 34445678999999999999999999873 34589999997532 23344577999999987 88888888887
Q ss_pred eeecCCc-----cchhhhhhcccchhhhhhhc---------------------------------------cCccccccc
Q 037624 240 FVCIKDA-----CFWFMNTWRGEACSVFCTMI---------------------------------------MKPLSWIGL 275 (408)
Q Consensus 240 ~~~~~~~-----~~~lv~e~~~~~g~l~~~l~---------------------------------------~k~~~~~l~ 275 (408)
+.... ..++++||+ ++++|..++. ++|.|++++
T Consensus 105 --~~~~~~~~~~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~ 181 (313)
T 3brb_A 105 --CIEMSSQGIPKPMVILPFM-KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR 181 (313)
T ss_dssp --EEC-------CEEEEEECC-TTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC
T ss_pred --EeeccccCCcccEEEEecc-cCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc
Confidence 44433 348899999 8888876651 788999999
Q ss_pred cCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSS 340 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 340 (408)
.++.+||+|||+++........ .....|+..| .++|||||||+++||+| |+.||......
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----- 256 (313)
T 3brb_A 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----- 256 (313)
T ss_dssp TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----
T ss_pred CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----
Confidence 9999999999999876433211 1223445555 68999999999999999 88888643211
Q ss_pred ccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 341 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+........ .......+.+++..||+.+|++|++
T Consensus 257 ----~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps 295 (313)
T 3brb_A 257 ----EMYDYLLHGHRLKQ----PEDCLDELYEIMYSCWRTDPLDRPT 295 (313)
T ss_dssp ----GHHHHHHTTCCCCC----BTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred ----HHHHHHHcCCCCCC----CccccHHHHHHHHHHcCCChhhCcC
Confidence 11111111111110 0122345778889999999999954
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-25 Score=210.58 Aligned_cols=193 Identities=12% Similarity=0.058 Sum_probs=131.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHh---c--ccCCcceeeeEe----Ee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDIL---Y--PKYDIETLLSFM----DF 240 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l---~--~~~n~~~l~~~~----~~ 240 (408)
.++|...+.||+|+||.||+|+. .+|+.||||++...........+.|.+|++++ . +|+|++++++.+ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999997 56899999999764444445678899999544 3 677777766321 22
Q ss_pred eecCCc----------------cchhhhhhcccchhhhhhhc--------------------------------------
Q 037624 241 VCIKDA----------------CFWFMNTWRGEACSVFCTMI-------------------------------------- 266 (408)
Q Consensus 241 ~~~~~~----------------~~~lv~e~~~~~g~l~~~l~-------------------------------------- 266 (408)
+...+. ..++++||+ . |+|.+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 229 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-Q-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 229 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-S-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-C-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 111111 256788887 3 56654431
Q ss_pred --cCccccccccCCceEEeecccccccCCCCCeeeecccCCCC-----------------------cccchhhhhHHHHH
Q 037624 267 --MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-----------------------EKCDVYSFGVVALE 321 (408)
Q Consensus 267 --~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y-----------------------~k~DVySfGvvl~E 321 (408)
+||.|++++.++++||+|||+++.... ......| ..| .++|||||||++||
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 789999999999999999999986432 2334455 555 47899999999999
Q ss_pred HHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 322 ILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 322 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
|+||+.||........ ...+... .. .....+.+++..||+.||++|++
T Consensus 306 lltg~~Pf~~~~~~~~---------~~~~~~~-~~--------~~~~~~~~li~~~L~~dp~~Rpt 353 (377)
T 3byv_A 306 IWCADLPITKDAALGG---------SEWIFRS-CK--------NIPQPVRALLEGFLRYPKEDRLL 353 (377)
T ss_dssp HHHSSCCC------CC---------SGGGGSS-CC--------CCCHHHHHHHHHHTCSSGGGCCC
T ss_pred HHHCCCCCcccccccc---------hhhhhhh-cc--------CCCHHHHHHHHHHcCCCchhCCC
Confidence 9999999864322111 1111111 11 01234667889999999999954
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=199.41 Aligned_cols=193 Identities=13% Similarity=0.137 Sum_probs=140.5
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
.+++|...+.||+|+||.||+|+.. +++.||||++.... ........+.+|+..+. +|+|+++++++ +...
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~----~~~~ 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL-AGSVDEQNALREVYAHAVLGQHSHVVRYFSA----WAED 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCC-TTSHHHHHHHHHHHHHHHSCSCTTBCCEEEE----EEET
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccc-cccHHHHHHHHHHHHHHHhCCCCCeeeeeee----eecC
Confidence 4578999999999999999999985 68999999997533 22334567888888776 78888888887 7777
Q ss_pred ccchhhhhhcccchhhhhhhc-------------------------------------cCccccccc-------------
Q 037624 246 ACFWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGL------------- 275 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~------------- 275 (408)
...++++||+ ++++|.+++. +||.|++++
T Consensus 84 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~ 162 (289)
T 1x8b_A 84 DHMLIQNEYC-NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD 162 (289)
T ss_dssp TEEEEEEECC-TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------
T ss_pred CeEEEEEEec-CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccc
Confidence 8889999999 8888877652 788899887
Q ss_pred ------cCCceEEeecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccccccc
Q 037624 276 ------RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLS 336 (408)
Q Consensus 276 ------~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~ 336 (408)
....+||+|||+++...... ...||..| .++|||||||+++||++|+.|+......
T Consensus 163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~- 237 (289)
T 1x8b_A 163 EDDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW- 237 (289)
T ss_dssp -------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-
T ss_pred cccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-
Confidence 34479999999998765332 12466655 5899999999999999999875422110
Q ss_pred CCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
..+..-..+.+.. .....+.+++..||+.||++|++.
T Consensus 238 --------~~~~~~~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~ 274 (289)
T 1x8b_A 238 --------HEIRQGRLPRIPQ-------VLSQEFTELLKVMIHPDPERRPSA 274 (289)
T ss_dssp --------HHHHTTCCCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred --------HHHHcCCCCCCCc-------ccCHHHHHHHHHHhCCCcccCCCH
Confidence 0011111122221 112346678889999999999553
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-25 Score=204.08 Aligned_cols=201 Identities=15% Similarity=0.165 Sum_probs=138.3
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|++++. +|++++..+.++ ......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~---~~~~~~ 79 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWC---GAEGDY 79 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-----SCCHHHHHHHHHHHHTTSTTCCCEEEE---EEETTE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-----chhHHHHHHHHHHHhhcCCCCCccccc---cCCCCc
Confidence 46789999999999999999997 678999999986532 2356888998886 666665555442 345667
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCcccccc---ccCCceEEeecccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIG---LRELEAFVADFGMTMH 290 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l---~~~~~~ki~DfGla~~ 290 (408)
.++++||+ +++|.+++. +||.|+++ ++++.+||+|||+++.
T Consensus 80 ~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 80 NVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEEEECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred eEEEEEec--CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 78899988 456655441 78999999 4889999999999987
Q ss_pred cCCCCCe-------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc
Q 037624 291 LYCDSSN-------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL 351 (408)
Q Consensus 291 ~~~~~~~-------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 351 (408)
....... .....||..| .++|||||||+++||+||+.||......... .....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~~~ 231 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR------QKYERIS 231 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS------SHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh------hhhhhhc
Confidence 6543321 2345788888 5899999999999999999999753221110 0111111
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 352 DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 352 d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
......+...........+.+++..||+.||++|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 267 (296)
T 3uzp_A 232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD 267 (296)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCC
T ss_pred ccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCC
Confidence 111110000001112345778889999999999954
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=199.94 Aligned_cols=190 Identities=18% Similarity=0.273 Sum_probs=133.9
Q ss_pred hhcccc-eeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 172 EDFDIK-YCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 172 ~~f~~~-~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
++|... +.||+|+||.||+|.. .+++.||||++.. ...+.+|++++. .|+|++++++++........
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 456665 7799999999999998 5688999999863 245677877763 89999999988654445577
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCcccccccc---CCceEEeecccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR---ELEAFVADFGMT 288 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~---~~~~ki~DfGla 288 (408)
..++++||+ ++++|.+++. +||.|++++. ++.+||+|||++
T Consensus 89 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 89 CLLIVMECL-DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEEECCC-CSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred eEEEEEeec-CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 889999999 8888877662 6888999886 789999999999
Q ss_pred cccCCCCCeeeecccCCCC-cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHH
Q 037624 289 MHLYCDSSNLTLLAGTYGY-EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y-~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 367 (408)
+..... .| .++|||||||+++||+||+.||............ ...+.......+ ........
T Consensus 168 ~~~~~~-----------~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~ 230 (299)
T 3m2w_A 168 KETTGE-----------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-----KTRIRMGQYEFP-NPEWSEVS 230 (299)
T ss_dssp EECTTC-----------GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS-----CCSSCTTCCSSC-HHHHTTSC
T ss_pred cccccc-----------cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH-----HHHHhhccccCC-chhcccCC
Confidence 875422 12 6899999999999999999998643221110000 001111111110 01111234
Q ss_pred HHHHHHHHhhccCCCCCcCC
Q 037624 368 VLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 368 ~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.+++..||+.||++|++
T Consensus 231 ~~~~~li~~~l~~dP~~Rps 250 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMT 250 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHHHHcccChhhCCC
Confidence 45778889999999999955
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-25 Score=210.48 Aligned_cols=158 Identities=21% Similarity=0.208 Sum_probs=122.4
Q ss_pred cccHHHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-----cCCcc
Q 037624 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-----KYDIE 232 (408)
Q Consensus 161 ~~~~~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-----~~n~~ 232 (408)
.+++.+.....++|...+.||+|+||+||+|+. .+++.||||++... ....+.+..|++++. + |+|++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 455555555678999999999999999999998 56889999998632 234566778888875 3 77777
Q ss_pred eeeeEeEeeecCCccchhhhhhcccchhhhhhhc-----------------------------------cCcccccccc-
Q 037624 233 TLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR- 276 (408)
Q Consensus 233 ~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~- 276 (408)
+++++ +......++++||+ +++|.+++. +||.|++++.
T Consensus 100 ~~~~~----~~~~~~~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGK----FMYYDHMCLIFEPL--GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEE----EEETTEEEEEECCC--CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCT
T ss_pred cccce----eeECCeeEEEEcCC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccc
Confidence 77776 56667788899987 455555441 7899999864
Q ss_pred ------------------------CCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHH
Q 037624 277 ------------------------ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVAL 320 (408)
Q Consensus 277 ------------------------~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~ 320 (408)
++.+||+|||+++...... ....||..| .++|||||||+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH---GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC---CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC---cCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 7899999999998754322 345677777 7899999999999
Q ss_pred HHHhCCCCCcc
Q 037624 321 EILMGRQPGEL 331 (408)
Q Consensus 321 Elltg~~p~~~ 331 (408)
||+||+.||..
T Consensus 251 ell~g~~pf~~ 261 (360)
T 3llt_A 251 ELYTGSLLFRT 261 (360)
T ss_dssp HHHHSSCSCCC
T ss_pred HHHHCCCCCCC
Confidence 99999999864
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=207.55 Aligned_cols=151 Identities=21% Similarity=0.238 Sum_probs=111.7
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC---
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--- 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--- 245 (408)
+.|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++++. +|+|+++++++ +...
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~----~~~~~~~ 99 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDV----FTPDETL 99 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEE----ECSCSST
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceee----EecCCcc
Confidence 5688889999999999999998 568999999996532 23344567899999997 78888888777 4333
Q ss_pred ---ccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccc
Q 037624 246 ---ACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 246 ---~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++++||+ +++|..++. +||.|++++.++.+||+|||+++.
T Consensus 100 ~~~~~~~lv~e~~--~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 100 DDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp TTCCCCEEEEECC--SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ccCceEEEEEecC--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 3458899988 345554431 789999999999999999999987
Q ss_pred cCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 291 LYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.... .+...||..| .++||||+||+++||+||+.||...
T Consensus 178 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 178 ADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp CCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 6432 2334566655 6899999999999999999998643
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-25 Score=205.30 Aligned_cols=196 Identities=21% Similarity=0.247 Sum_probs=126.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHH-Hhc--ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVD-ILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~-~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||.||+|... +|+.||||++.... .......+..|+. ++. +|+|+++++++ +.....
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~h~niv~~~~~----~~~~~~ 95 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCPYIVQFYGA----LFREGD 95 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCCCTTBCCEEEE----EECSSE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCCCCcEeeeeeE----EEeCCc
Confidence 57888899999999999999984 68899999997532 2233456667776 443 78888888887 667778
Q ss_pred chhhhhhcccchhhhhhh---------------------------------------ccCccccccccCCceEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTM---------------------------------------IMKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l---------------------------------------~~k~~~~~l~~~~~~ki~DfGla 288 (408)
.++++||+ ++ ++.+++ +++|.|++++.++.+||+|||++
T Consensus 96 ~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 96 CWICMELM-ST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173 (327)
T ss_dssp EEEEECCC-SE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred eEEEEeec-CC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence 88999998 43 322211 27889999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC
Q 037624 289 MHLYCDSSNLTLLAGTYGY----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
+...... ......||..| .++|||||||+++||+||+.||........ .+..+..
T Consensus 174 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~~ 244 (327)
T 3aln_A 174 GQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD--------QLTQVVK 244 (327)
T ss_dssp CC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------CCCCC
T ss_pred eeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH--------HHHHHhc
Confidence 8764322 12223455555 589999999999999999999864321110 0111111
Q ss_pred ---CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 ---PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ---~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+... ........+.+++..||+.||++|++
T Consensus 245 ~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps 279 (327)
T 3aln_A 245 GDPPQLSNS---EEREFSPSFINFVNLCLTKDESKRPK 279 (327)
T ss_dssp SCCCCCCCC---SSCCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCCCCCc---ccccCCHHHHHHHHHHhhCChhhCcC
Confidence 111110 00112335678889999999999954
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=201.00 Aligned_cols=195 Identities=11% Similarity=-0.018 Sum_probs=139.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|...+.||+|+||.||+|+.. +|+.||||.+......+....+.|.+|+.++. +|+|+++++++ +..++..
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~----~~~~~~~ 106 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDV----VHTRAGG 106 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEE----EEETTEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEE----EEECCcE
Confidence 46888899999999999999985 48999999998654444445678999999886 78888888777 6667788
Q ss_pred hhhhhhcccchhhhhhhc-------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
++++||+ ++++|.+++. +||.|++++.++.+||+++|.....
T Consensus 107 ~lv~e~~-~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~------ 179 (286)
T 3uqc_A 107 LVVAEWI-RGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDA------ 179 (286)
T ss_dssp EEEEECC-CEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTTC------
T ss_pred EEEEEec-CCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCCC------
Confidence 9999999 8888887762 7899999999999999977654211
Q ss_pred eeecccCCCCcccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhh
Q 037624 298 LTLLAGTYGYEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFAC 377 (408)
Q Consensus 298 ~~~~~gt~~y~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C 377 (408)
. .++|||||||++|||+||+.||........... ....+....... ..........+.+++..|
T Consensus 180 --------~-~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~ 243 (286)
T 3uqc_A 180 --------N-PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP------AERDTAGQPIEP-ADIDRDIPFQISAVAARS 243 (286)
T ss_dssp --------C-HHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE------CCBCTTSCBCCH-HHHCTTSCHHHHHHHHHH
T ss_pred --------C-chhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH------HHHHhccCCCCh-hhcccCCCHHHHHHHHHH
Confidence 1 699999999999999999999975432211100 000011111100 011112234467888999
Q ss_pred ccCCCCCc-CCCccccc
Q 037624 378 LRSNPKTP-MQKPFHEI 393 (408)
Q Consensus 378 ~~~~P~~R-m~~~~~~~ 393 (408)
|+.||++| +.+.+.++
T Consensus 244 l~~dP~~Rs~~el~~~L 260 (286)
T 3uqc_A 244 VQGDGGIRSASTLLNLM 260 (286)
T ss_dssp HCTTSSCCCHHHHHHHH
T ss_pred cccCCccCCHHHHHHHH
Confidence 99999999 33343333
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-25 Score=205.06 Aligned_cols=203 Identities=15% Similarity=0.163 Sum_probs=135.0
Q ss_pred HHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
...++|...+.||+|+||.||+|+. .+++.||||.+.... ..+.+.+|++++. +|++++..+..+ ....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~---~~~~ 77 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWC---GAEG 77 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEE---EEET
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeee---cCCC
Confidence 3457899999999999999999997 568899999875432 2345778888876 666666655541 3456
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCcccccc---ccCCceEEeecccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIG---LRELEAFVADFGMT 288 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l---~~~~~~ki~DfGla 288 (408)
...++++||+ +++|.+++. +||.|+++ ++++.+||+|||++
T Consensus 78 ~~~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 78 DYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp TEEEEEEECC--CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred CceEEEEEcc--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 6778899987 456655441 78999999 78899999999999
Q ss_pred cccCCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 289 MHLYCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 289 ~~~~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
+....... ......||..| .++|||||||+++||+||+.||......... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~ 229 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR------QKYER 229 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS------SHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh------hhhhh
Confidence 87654322 11345678777 5899999999999999999999753322110 00111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.......+...........+.+++..||+.+|++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 267 (296)
T 4hgt_A 230 ISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD 267 (296)
T ss_dssp HHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCC
T ss_pred hhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCC
Confidence 11111111000000112345778889999999999954
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=206.86 Aligned_cols=151 Identities=23% Similarity=0.275 Sum_probs=114.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc-
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC- 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~- 247 (408)
++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.++. +|+|+++++++ +.....
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~----~~~~~~~ 116 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDV----FTPASSL 116 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEE----ECSCSSS
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhh----eeccCCc
Confidence 5788889999999999999997 468899999997532 23344677889999987 88888888887 544443
Q ss_pred -----chhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 248 -----FWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 248 -----~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
.++++||+ + +++...+ ++||.|++++.++.+||+|||+++..
T Consensus 117 ~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 117 RNFYDFYLVMPFM-Q-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp TTCCCCEEEEECC-C-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred ccceeEEEEEccc-c-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 37889988 4 4555433 17999999999999999999999865
Q ss_pred CCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
... .....||..| .++|||||||+++||+||+.||...
T Consensus 195 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 195 DAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 432 2335667766 6899999999999999999999643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=206.90 Aligned_cols=157 Identities=18% Similarity=0.195 Sum_probs=118.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee----ecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV----CIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~----~~~ 244 (408)
++|...+.||+|+||.||+|+. .+|+.||||++.... ........+.+|++++. +|+|++++++++... ...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSS-CSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 5789999999999999999998 568999999986543 22334567889999987 888888888873321 111
Q ss_pred Cccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++|+||+ ++ ++...+ ++||.|++++.++.+||+|||+++.
T Consensus 96 ~~~~~lv~e~~-~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 96 KGSIYLVFDFC-EH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp -CEEEEEEECC-SE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CceEEEEEecc-CC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 44678999998 53 333222 1799999999999999999999987
Q ss_pred cCCCC----CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDS----SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~----~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... .......||..| .++|||||||+++||+||+.||..
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 64221 112344566666 689999999999999999999864
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-25 Score=217.37 Aligned_cols=200 Identities=15% Similarity=0.199 Sum_probs=136.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||.||+|+. .+++.||||++..... ..++.+|++++. +|.+++..+.++ +......
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~---~~~~~~~ 78 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWF---GVEGDYN 78 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEE---EEETTEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEE---EeeCCEE
Confidence 5788999999999999999997 5689999998764321 245778888876 454444433332 5566677
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCcccccc---ccCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIG---LRELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l---~~~~~~ki~DfGla~~~ 291 (408)
++++||+ +++|.+++. +||.|+++ +.++.+||+|||+++..
T Consensus 79 ~lvme~~--g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 79 VLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp EEEEECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEEECC--CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 8899987 556655441 79999999 58899999999999877
Q ss_pred CCCCCe-------eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC
Q 037624 292 YCDSSN-------LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 292 ~~~~~~-------~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
...... .....||..| .++|||||||++|||+||+.||....... ....+..+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~------~~~~~~~i~~ 230 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYEKISE 230 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS------HHHHHHHHHH
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh------HHHHHHHHhh
Confidence 543321 1256789888 58899999999999999999997532111 0011111111
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+..............+.+++..||+.+|++|++
T Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs 265 (483)
T 3sv0_A 231 KKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPD 265 (483)
T ss_dssp HHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCC
T ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcC
Confidence 11110000111122346788999999999999943
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=202.72 Aligned_cols=203 Identities=20% Similarity=0.327 Sum_probs=139.5
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c--cCCcceeeeEeEee
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P--KYDIETLLSFMDFV 241 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~--~~n~~~l~~~~~~~ 241 (408)
.+....++|...+.||+|+||.||+|...+++.||||.+.... .+....+.+.+|++++. + |+|+++++++
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~---- 96 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY---- 96 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE----
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEE----
Confidence 3334456789999999999999999999889999999997532 23345678899999886 3 5888888877
Q ss_pred ecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
+......++++|+ .+++|.+++. ++|.|++++ ++.+||+|||++
T Consensus 97 ~~~~~~~~lv~e~--~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~ 173 (313)
T 3cek_A 97 EITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173 (313)
T ss_dssp EECSSEEEEEECC--CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSS
T ss_pred eecCCEEEEEEec--CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccc
Confidence 7777788888884 4667766552 688888885 589999999999
Q ss_pred cccCCCCCe--eeecccCCCC-----------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccc
Q 037624 289 MHLYCDSSN--LTLLAGTYGY-----------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 289 ~~~~~~~~~--~~~~~gt~~y-----------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 343 (408)
+........ .....||..| .++|||||||+++||+||+.||.... ..
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~ 245 (313)
T 3cek_A 174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--------NQ 245 (313)
T ss_dssp CC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC--------SH
T ss_pred ccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH--------HH
Confidence 876433221 1234566665 37999999999999999999986421 11
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+..+.++......... ....+.+++..||+.||++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps 286 (313)
T 3cek_A 246 ISKLHAIIDPNHEIEFPDI---PEKDLQDVLKCCLKRDPKQRIS 286 (313)
T ss_dssp HHHHHHHHCTTSCCCCCCC---SCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHHhcccccCCccc---chHHHHHHHHHHccCCcccCcC
Confidence 1123334443332211111 1234667888999999999954
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-25 Score=213.37 Aligned_cols=216 Identities=13% Similarity=0.058 Sum_probs=134.4
Q ss_pred hhcccceeecccceeEEEEEEeC----CCcEEEEEecccccCCC--------cchhhHHHHHHHHhc--ccCCcceeeeE
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT----SSKVIALKKLHHWENEE--------PASTRSFQNEVDILY--PKYDIETLLSF 237 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~--------~~~~~~~~~E~~~l~--~~~n~~~l~~~ 237 (408)
++|...+.||+|+||.||+|+.. ++..||||++....... ....+.+.+|+..+. +|+|+++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888999999999999999985 57789999987532100 011234666777665 78888888877
Q ss_pred eEeeecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC--ceEE
Q 037624 238 MDFVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL--EAFV 282 (408)
Q Consensus 238 ~~~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~--~~ki 282 (408)
...........++++||+ +++|.+++. +||.|++++.++ .+||
T Consensus 117 ~~~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL 194 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL--GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYL 194 (345)
T ss_dssp EEEESSSCEEEEEEEECE--EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEE
T ss_pred cccccCCCcEEEEEEecc--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEE
Confidence 332222267789999998 567766552 789999998777 9999
Q ss_pred eecccccccCCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccc
Q 037624 283 ADFGMTMHLYCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 283 ~DfGla~~~~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 343 (408)
+|||+++.+..... ......||..| .++|||||||++|||+||+.||........ .
T Consensus 195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-----~ 269 (345)
T 2v62_A 195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV-----A 269 (345)
T ss_dssp CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH-----H
T ss_pred EeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH-----H
Confidence 99999987643211 11345788888 689999999999999999999953211000 0
Q ss_pred cchhhhccCCCCCCccchh--HHHHHHHHHHHHHhhccCCCCCc--CCCcccccc
Q 037624 344 NIMLLDVLDPRLSPPVDRM--VVRDIVLVSTILFACLRSNPKTP--MQKPFHEIS 394 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~--~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~~ 394 (408)
.........+.+....... .......+.+++..||+.+|++| +.+++..++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 0000011111111000000 00223357788899999999999 444444444
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.9e-25 Score=207.17 Aligned_cols=153 Identities=20% Similarity=0.267 Sum_probs=123.3
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcch--------------hhHHHHHHHHhc--ccCCcceee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPAS--------------TRSFQNEVDILY--PKYDIETLL 235 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~--------------~~~~~~E~~~l~--~~~n~~~l~ 235 (408)
++|...+.||+|+||.||+|+. +|+.||||++.......... .+.|.+|++++. +|+|+++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5788999999999999999999 89999999997543222111 178999999997 888988888
Q ss_pred eEeEeeecCCccchhhhhhcccchhhhhh------h------------------------------------ccCccccc
Q 037624 236 SFMDFVCIKDACFWFMNTWRGEACSVFCT------M------------------------------------IMKPLSWI 273 (408)
Q Consensus 236 ~~~~~~~~~~~~~~lv~e~~~~~g~l~~~------l------------------------------------~~k~~~~~ 273 (408)
++ +......++++||+ ++++|.++ + +++|.|++
T Consensus 110 ~~----~~~~~~~~lv~e~~-~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 110 GI----ITNYDEVYIIYEYM-ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp EE----EESSSEEEEEEECC-TTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred EE----EeeCCeEEEEEecc-CCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 88 77788899999999 88887765 2 16788888
Q ss_pred cccCCceEEeecccccccCCCCCeeeecccCCCC-------------c-ccchhhhhHHHHHHHhCCCCCccc
Q 037624 274 GLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------------E-KCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 274 l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y-------------~-k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
++.++++||+|||+++..... ......||..| . ++|||||||+++||+||+.||...
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999876432 22334556555 2 899999999999999999998643
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=206.17 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=107.2
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
.+.....++|...+.||+|+||.||+|+. .+|+.||||++.... .....+.+|++.+. +|+|++++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----RFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc----cccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 45667788999999999999999999998 468899999986432 22345566666554 899999998884321
Q ss_pred ec---CCccchhhhhhcccchhhh---h-----------------------------------hhccCcccccccc-CCc
Q 037624 242 CI---KDACFWFMNTWRGEACSVF---C-----------------------------------TMIMKPLSWIGLR-ELE 279 (408)
Q Consensus 242 ~~---~~~~~~lv~e~~~~~g~l~---~-----------------------------------~l~~k~~~~~l~~-~~~ 279 (408)
.. .....++++||+ +++.+. . |.++||.|++++. ++.
T Consensus 92 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CSSCTTCEEEEEEEECC-SCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE
T ss_pred ccccccceeEEEEeecc-cccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc
Confidence 11 112367788887 443111 0 0027899999986 899
Q ss_pred eEEeecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 280 AFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+||+|||+++...... ......||..| .++|||||||++|||+||+.||..
T Consensus 171 ~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 234 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234 (360)
T ss_dssp EEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence 9999999998765432 22334566655 689999999999999999999864
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=203.40 Aligned_cols=159 Identities=19% Similarity=0.230 Sum_probs=119.9
Q ss_pred HHHhhcccceeecccceeEEEEEEe--CCCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEee
Q 037624 169 EATEDFDIKYCFGTGGYGSVYIAQL--TSSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFV 241 (408)
Q Consensus 169 ~at~~f~~~~~iG~G~~G~Vy~~~~--~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~ 241 (408)
.+.++|...+.||+|+||.||+|+. .+|+.||||++..... .......+.+|++++. .|+|++++++++...
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC-TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcc-cccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 4557899999999999999999998 4688999999975432 2223346677777664 688888888873321
Q ss_pred e-cCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeec
Q 037624 242 C-IKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADF 285 (408)
Q Consensus 242 ~-~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~Df 285 (408)
. ......++++||+ + |+|.+++. ++|.|++++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 87 RTDRETKLTLVFEHV-D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp ECSSEEEEEEEEECC-S-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred ccCCCceEEEEEecC-C-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence 1 1456678899998 5 46665541 7889999999999999999
Q ss_pred ccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 286 GMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 286 Gla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+++...... ......||..| .++|||||||+++||+||+.||..
T Consensus 165 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (326)
T 1blx_A 165 GLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221 (326)
T ss_dssp CSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9998764322 22345677777 689999999999999999999864
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=205.02 Aligned_cols=195 Identities=18% Similarity=0.253 Sum_probs=134.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcE--EEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKV--IALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~--vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
++|...+.||+|+||.||+|+.. +|.. ||||.+.... .....+.+.+|++++. +|+|+++++++ +...
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~----~~~~ 98 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGA----CEHR 98 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEE----EEET
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhcee----eeeC
Confidence 57888999999999999999974 4554 4999987432 2334567999999986 67888877777 6777
Q ss_pred ccchhhhhhcccchhhhhhh-------------------------------------------------ccCcccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTM-------------------------------------------------IMKPLSWIGLR 276 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l-------------------------------------------------~~k~~~~~l~~ 276 (408)
...++++||+ ++++|.+++ +++|.|++++.
T Consensus 99 ~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~ 177 (327)
T 1fvr_A 99 GYLYLAIEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 177 (327)
T ss_dssp TEEEEEECCC-TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred CceEEEEecC-CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC
Confidence 8889999999 888876654 16888999999
Q ss_pred CCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccc
Q 037624 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQ 343 (408)
Q Consensus 277 ~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 343 (408)
++.+||+|||+++...... ......+|..| .++|||||||+++||+| |+.||........
T Consensus 178 ~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~------ 250 (327)
T 1fvr_A 178 NYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------ 250 (327)
T ss_dssp GGCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH------
T ss_pred CCeEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH------
Confidence 9999999999997543211 11233456666 68999999999999999 9999864321100
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.....+.... .....+.+++..||+.+|++|++
T Consensus 251 ~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps 287 (327)
T 1fvr_A 251 YEKLPQGYRLEKPL-------NCDDEVYDLMRQCWREKPYERPS 287 (327)
T ss_dssp HHHGGGTCCCCCCT-------TBCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHhhcCCCCCCCC-------CCCHHHHHHHHHHccCChhhCcC
Confidence 00011111111111 12234678889999999999954
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=202.42 Aligned_cols=203 Identities=18% Similarity=0.271 Sum_probs=124.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|++++. +|+|+++++++ +.....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~~ 87 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTS----FVVKDE 87 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEE----EESSSC
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEE----EeecCC
Confidence 45788899999999999999997 4688999999865321 234567889999987 78888888877 777778
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------------cCccccccccCCceEEeecc
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------------MKPLSWIGLRELEAFVADFG 286 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------------~k~~~~~l~~~~~~ki~DfG 286 (408)
.++++||+ ++++|.+++. ++|.|++++.++.+||+|||
T Consensus 88 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 88 LWLVMKLL-SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEEEECC-TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred cEEEehhc-cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEecc
Confidence 89999999 8887765531 68889999999999999999
Q ss_pred cccccCCCCC-----eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccc--cccch
Q 037624 287 MTMHLYCDSS-----NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSS--DQNIM 346 (408)
Q Consensus 287 la~~~~~~~~-----~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--~~~~~ 346 (408)
+++....... ......||..| .++|||||||+++||+||+.||............ .....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence 9987643221 11335677777 6899999999999999999998643221110000 00000
Q ss_pred h-hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 347 L-LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 347 ~-~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ....++.... .....+.+++..||+.||++|++
T Consensus 247 ~~~~~~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps 281 (303)
T 2vwi_A 247 LETGVQDKEMLK-------KYGKSFRKMISLCLQKDPEKRPT 281 (303)
T ss_dssp TTC-----CCCC-------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred cccccccchhhh-------hhhHHHHHHHHHHccCChhhCcC
Confidence 0 0011111111 11234668889999999999944
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-24 Score=198.51 Aligned_cols=202 Identities=20% Similarity=0.273 Sum_probs=143.9
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|++++. +|+|+++++++ +....
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----~~~~~ 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEI----LEDSS 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSS
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhccCCCccEEEEE----EeCCC
Confidence 3468999999999999999999985 688999999975432 2334678999999987 88888888887 77778
Q ss_pred cchhhhhhcccchhhhhhhc---------------------------------cCcccccccc---CCceEEeecccccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLR---ELEAFVADFGMTMH 290 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~---~~~~ki~DfGla~~ 290 (408)
..++++||+ ++++|.+++. ++|.|++++. +..+||+|||+++.
T Consensus 95 ~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 95 SFYIVGELY-TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEEEECCC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred eEEEEEEcc-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 889999999 8888866541 7888998864 45799999999987
Q ss_pred cCCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
...... .....||..| .++||||||++++||+||+.||...... .....+.......+.
T Consensus 174 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~ 243 (287)
T 2wei_A 174 FQQNTK-MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY---------DILKRVETGKYAFDL 243 (287)
T ss_dssp BCCCSS-CSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCCS
T ss_pred ecCCCc-cccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHcCCCCCCc
Confidence 643321 2223455555 6899999999999999999998643211 011111111111100
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.........+.+++..|++.+|++|++.
T Consensus 244 -~~~~~~~~~~~~li~~~l~~dp~~Rps~ 271 (287)
T 2wei_A 244 -PQWRTISDDAKDLIRKMLTFHPSLRITA 271 (287)
T ss_dssp -GGGTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred -hhhhhcCHHHHHHHHHHcccChhhCcCH
Confidence 1111123356788899999999999653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-24 Score=201.93 Aligned_cols=197 Identities=17% Similarity=0.209 Sum_probs=134.7
Q ss_pred hhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
..|...+.||+|+||+||+|+..+ +..||+|.+... ......+.|.+|+.++. +|+|+++++++ +...+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~---~~~~~ 99 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGI---CLRSE 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEE---ECCSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeE---EEcCC
Confidence 357778999999999999999743 236899998752 23345678999999986 78888777776 23345
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
...++++||+ ++++|.+++. +||.|+++++++.+||+|||+++..
T Consensus 100 ~~~~~v~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 100 GSPLVVLPYM-KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp SCCEEEEECC-TTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred CceEEEEeCC-CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccc
Confidence 5778999999 8888887762 7889999999999999999999876
Q ss_pred CCCCC----eeeecccCCCC------------cccchhhhhHHHHHHHhC-CCCCcccccccCCccccccchhhhccCCC
Q 037624 292 YCDSS----NLTLLAGTYGY------------EKCDVYSFGVVALEILMG-RQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 292 ~~~~~----~~~~~~gt~~y------------~k~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
..... ......||..| .++|||||||+++||+|| ..|+....... ....+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---------~~~~~~~~~ 249 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---------ITVYLLQGR 249 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---------HHHHHHTTC
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---------HHHHHhcCC
Confidence 43221 12334556666 689999999999999995 55554321111 011111111
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..... . .....+.+++..||+.+|++|++
T Consensus 250 ~~~~~-~---~~~~~l~~li~~~l~~~p~~Rps 278 (298)
T 3f66_A 250 RLLQP-E---YCPDPLYEVMLKCWHPKAEMRPS 278 (298)
T ss_dssp CCCCC-T---TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCC-c---cCCHHHHHHHHHHcCCChhhCcC
Confidence 11000 1 11234678889999999999954
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-25 Score=206.33 Aligned_cols=197 Identities=20% Similarity=0.207 Sum_probs=136.7
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
.++|...+.||+|+||.||+|+. .+++.||||.+... ........|.+|+.++. +|+|+++++++ +
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~ 102 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGV----S 102 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----E
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCCCCCCCeEEEE----E
Confidence 35788899999999999999984 34678999999642 23344567899999887 88888888888 7
Q ss_pred cCCccchhhhhhcccchhhhhhhc----------------------------------------cCccccccc---cCCc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGL---RELE 279 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~---~~~~ 279 (408)
......++++||+ ++++|.+++. ++|.|++++ ++..
T Consensus 103 ~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 103 LQSLPRFILMELM-AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp CSSSSCEEEEECC-TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred cCCCCcEEEEecC-CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcce
Confidence 7778889999999 8888876652 678888888 4556
Q ss_pred eEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCcccccc
Q 037624 280 AFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQN 344 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 344 (408)
+||+|||+++........ .....||..| .++|||||||+++||+| |+.||..... .
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---------~ 252 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------Q 252 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---------H
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---------H
Confidence 999999999865432211 1234566666 68999999999999999 9999864211 1
Q ss_pred chhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 345 IMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 345 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+........ .......+.+++..||+.||++|++
T Consensus 253 ~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps 291 (327)
T 2yfx_A 253 EVLEFVTSGGRMDP----PKNCPGPVYRIMTQCWQHQPEDRPN 291 (327)
T ss_dssp HHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHhcCCCCCC----CCCCCHHHHHHHHHHhcCChhhCcC
Confidence 11111111111100 0112335668889999999999944
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-25 Score=208.49 Aligned_cols=202 Identities=17% Similarity=0.245 Sum_probs=137.8
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++. +|+|++++++++.........
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 35788999999999999999998 56899999998642 3345678899999987 888888888873321224457
Q ss_pred chhhhhhcccchhhhhhhc-------------------------------------cCccccccccCCceEEeecccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI-------------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-------------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
.++++||+ ++++|.+++. ++|.|++++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 105 AWLLLPFF-KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEEEECC-TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred eEEEEEeC-CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 78999999 8888866542 788999999999999999999876
Q ss_pred cCCCCCe---------eeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccch
Q 037624 291 LYCDSSN---------LTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIM 346 (408)
Q Consensus 291 ~~~~~~~---------~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~ 346 (408)
....... .....||..| .++|||||||++|||+||+.||+....... .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--------~ 255 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--------S 255 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--------C
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--------h
Confidence 5321100 0122345554 589999999999999999999864211110 0
Q ss_pred hhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 347 LLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 347 ~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...........+.. ......+.+++..||+.||++|++
T Consensus 256 ~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps 293 (317)
T 2buj_A 256 VALAVQNQLSIPQS---PRHSSALWQLLNSMMTVDPHQRPH 293 (317)
T ss_dssp HHHHHHCC--CCCC---TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhHHhhccCCCCcc---ccCCHHHHHHHHHHhhcChhhCCC
Confidence 00111111111000 112234678889999999999944
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-25 Score=204.25 Aligned_cols=188 Identities=16% Similarity=0.216 Sum_probs=135.6
Q ss_pred hhcccceeecccceeEEEEEEeCC-C-------cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-S-------KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV 241 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g-------~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~ 241 (408)
++|...+.||+|+||.||+|+... + ..||+|.+.... ....+.|.+|++++. +|+|+++++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~---- 80 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGV---- 80 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEE----
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEE----
Confidence 578888999999999999998743 3 469999986532 234678999999987 88888888888
Q ss_pred ecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCc--------
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELE-------- 279 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~-------- 279 (408)
+..+...++++||+ ++++|.+++. +||.|++++.++.
T Consensus 81 ~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 81 CVCGDENILVQEFV-KFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ECCTTCCEEEEECC-TTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EEeCCCCEEEEECC-CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence 77788889999999 8888887762 7889999987776
Q ss_pred eEEeecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCC-CcccccccCCccccccc
Q 037624 280 AFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQP-GELLSSLSSSSSSDQNI 345 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p-~~~~~~~~~~~~~~~~~ 345 (408)
+||+|||+++..... ....||..| .++|||||||+++||+||..| +..... ..
T Consensus 160 ~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~---------~~ 226 (289)
T 4fvq_A 160 IKLSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS---------QR 226 (289)
T ss_dssp EEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---------HH
T ss_pred eeeccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch---------HH
Confidence 999999999765322 223456655 689999999999999996554 432111 00
Q ss_pred hhhhcc-CCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 346 MLLDVL-DPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 346 ~~~~~~-d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...... .+.+.... ...+.+++..||+.||++|++
T Consensus 227 ~~~~~~~~~~~~~~~-------~~~l~~li~~~l~~dp~~Rps 262 (289)
T 4fvq_A 227 KLQFYEDRHQLPAPK-------AAELANLINNCMDYEPDHRPS 262 (289)
T ss_dssp HHHHHHTTCCCCCCS-------SCTTHHHHHHHSCSSGGGSCC
T ss_pred HHHHhhccCCCCCCC-------CHHHHHHHHHHcCCChhHCcC
Confidence 001111 11111111 123567888999999999944
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-24 Score=201.47 Aligned_cols=147 Identities=16% Similarity=0.207 Sum_probs=117.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-cCCcceeeeEeEeeecC--C
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-KYDIETLLSFMDFVCIK--D 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-~~n~~~l~~~~~~~~~~--~ 245 (408)
++|...+.||+|+||+||+|+. .+++.||||++... ..+.+.+|++++. + |+|++++.++ +.. .
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~----~~~~~~ 105 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADI----VKDPVS 105 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEE----EECTTT
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeee----eccCCC
Confidence 6788999999999999999987 56889999998642 2467899999987 3 8888888777 444 5
Q ss_pred ccchhhhhhcccchhhhhhhc------------------------------cCccccccccCC-ceEEeecccccccCCC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI------------------------------MKPLSWIGLREL-EAFVADFGMTMHLYCD 294 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~------------------------------~k~~~~~l~~~~-~~ki~DfGla~~~~~~ 294 (408)
...++++||+ +++++..++. +||.|++++.++ .+||+|||+++.....
T Consensus 106 ~~~~lv~e~~-~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 106 RTPALVFEHV-NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp CCEEEEEECC-CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CceEEEEecc-CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 5678999999 8887766542 799999999665 8999999999876433
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
.. .....||..| .++|||||||+++||+||+.||.
T Consensus 185 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 185 QE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp CC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred Cc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 22 2334555555 68999999999999999999984
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-24 Score=200.31 Aligned_cols=199 Identities=16% Similarity=0.135 Sum_probs=136.5
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCC-CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENE-EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|...+.||+|+||.||+|.. .+++.||||.+...... .....+.+.+|++++. +|+|++++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~ 81 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLY--NEEKQ 81 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE--CC---
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEE--cCCCC
Confidence 35788899999999999999998 45889999999753211 1234577999999997 7888887777621 14455
Q ss_pred cchhhhhhcccchhhhhhh-----------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 247 CFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||+ +++ +.+.+ +++|.|++++.++.+||+|||+++..
T Consensus 82 ~~~lv~e~~-~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 82 KMYMVMEYC-VCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp CEEEEEECC-SEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEehhc-cCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 778999998 554 22222 17899999999999999999999876
Q ss_pred CCCC--CeeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDS--SNLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~--~~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
.... .......||..| .++|||||||+++||+||+.||...... .....+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~i~~~~~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---------KLFENIGKGSY 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHCCC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---------HHHHHHhcCCC
Confidence 4322 222344577766 4799999999999999999998643211 01111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+ ......+.+++..||+.||++|++
T Consensus 231 ~~~-----~~~~~~l~~li~~~l~~dp~~Rps 257 (305)
T 2wtk_C 231 AIP-----GDCGPPLSDLLKGMLEYEPAKRFS 257 (305)
T ss_dssp CCC-----SSSCHHHHHHHHHHTCSSTTTSCC
T ss_pred CCC-----CccCHHHHHHHHHHccCChhhCCC
Confidence 111 012234667889999999999954
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-24 Score=208.64 Aligned_cols=156 Identities=19% Similarity=0.240 Sum_probs=112.2
Q ss_pred HHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC- 242 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~- 242 (408)
+....++|...+.||+|+||+||+|+. .+|+.||||++.... +...+|++++. +|+|++++++++....
T Consensus 2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-------RYKNRELDIMKVLDHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHHcCCCCccchhheeeecCc
Confidence 345567899999999999999999997 568999999986422 22347888886 7888888877732110
Q ss_pred ---------------------------------cCCccchhhhhhcccchhhhhhh------------------------
Q 037624 243 ---------------------------------IKDACFWFMNTWRGEACSVFCTM------------------------ 265 (408)
Q Consensus 243 ---------------------------------~~~~~~~lv~e~~~~~g~l~~~l------------------------ 265 (408)
......++++||+ ++ +|.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~ 152 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV-PD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFR 152 (383)
T ss_dssp -----------------------------------CCEEEEEECCC-SE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecC-Cc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 2233467899998 53 433322
Q ss_pred -------------ccCccccccc-cCCceEEeecccccccCCCCCeeeecccCCCC-------------cccchhhhhHH
Q 037624 266 -------------IMKPLSWIGL-RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVV 318 (408)
Q Consensus 266 -------------~~k~~~~~l~-~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvv 318 (408)
++||.|++++ +++.+||+|||+++...... ......||..| .++|||||||+
T Consensus 153 aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 153 AVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 1789999998 68999999999998764332 22334566666 68999999999
Q ss_pred HHHHHhCCCCCccc
Q 037624 319 ALEILMGRQPGELL 332 (408)
Q Consensus 319 l~Elltg~~p~~~~ 332 (408)
++||++|+.||...
T Consensus 232 l~ell~g~~pf~~~ 245 (383)
T 3eb0_A 232 FGELILGKPLFSGE 245 (383)
T ss_dssp HHHHHHSSCSSCCS
T ss_pred HHHHHhCCCCCCCC
Confidence 99999999999643
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-25 Score=200.81 Aligned_cols=190 Identities=22% Similarity=0.276 Sum_probs=140.3
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-----
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC----- 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~----- 242 (408)
.++|...+.||+|+||.||+|+.. +|+.||+|++... .+.+.+|++++. +|+|++++.+++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-------SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-------cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 467999999999999999999985 6899999999752 145778888886 8999998888743321
Q ss_pred -------cCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCce
Q 037624 243 -------IKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEA 280 (408)
Q Consensus 243 -------~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ 280 (408)
......++++||+ ++++|.+++. ++|.|+++++++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFC-DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ------CCEEEEEEEEECCC-CSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccccCcceEEEEEecc-CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCE
Confidence 1244578999999 8888877662 78889999999999
Q ss_pred EEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhh
Q 037624 281 FVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLL 348 (408)
Q Consensus 281 ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 348 (408)
||+|||+++...... ......||..| .++|||||||+++||+||..|+..... ...
T Consensus 162 kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----------~~~ 229 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-----------FFT 229 (284)
T ss_dssp EECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-----------HHH
T ss_pred EECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-----------HHH
Confidence 999999998765432 22345678777 689999999999999999998642210 011
Q ss_pred hccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 349 ~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+.+..+.... ...+.+++..||+.||++|++
T Consensus 230 ~~~~~~~~~~~-------~~~~~~li~~~l~~dp~~Rps 261 (284)
T 2a19_B 230 DLRDGIISDIF-------DKKEKTLLQKLLSKKPEDRPN 261 (284)
T ss_dssp HHHTTCCCTTS-------CHHHHHHHHHHTCSSGGGSCC
T ss_pred HhhcccccccC-------CHHHHHHHHHHccCChhhCcC
Confidence 11222222111 123557888999999999954
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-24 Score=223.09 Aligned_cols=197 Identities=16% Similarity=0.211 Sum_probs=139.0
Q ss_pred HHhhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~ 243 (408)
..++|...+.||+|+||.||+|.... +..||||++... ......+.|.+|+.++. +|+|+++++++ +.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~----~~ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGV----IT 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EC
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE----Ee
Confidence 35678889999999999999999742 457999998642 23344578999999987 88888888877 54
Q ss_pred CCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTM 289 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~ 289 (408)
++..++++||+ ++|+|.+++. +||.|++++.++.+||+|||+++
T Consensus 462 -~~~~~lv~E~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 462 -ENPVWIIMELC-TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp -SSSCEEEEECC-TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred -cCceEEEEEcC-CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 34578999999 8888887662 78999999999999999999998
Q ss_pred ccCCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 290 HLYCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 290 ~~~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
........ .....||..| .++|||||||++|||+| |+.||...... .....+.+...
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---------~~~~~i~~~~~ 610 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---------DVIGRIENGER 610 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---------HHHHHHHHTCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---------HHHHHHHcCCC
Confidence 76433221 1234455666 68999999999999997 99998643211 11111111110
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. . +......+.+++..||+.||++|++
T Consensus 611 ~~-~---~~~~~~~l~~li~~~l~~dP~~RPs 638 (656)
T 2j0j_A 611 LP-M---PPNCPPTLYSLMTKCWAYDPSRRPR 638 (656)
T ss_dssp CC-C---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CC-C---CccccHHHHHHHHHHcCCChhHCcC
Confidence 00 0 0122345678889999999999954
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=204.36 Aligned_cols=158 Identities=20% Similarity=0.234 Sum_probs=120.3
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-cCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC-IKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~-~~~~ 246 (408)
.++|...+.||+|+||.||+|... +++.||||++... ......+.+.+|++++. +|+|++++++++.... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 457889999999999999999974 6889999999742 23334577899999987 8888888887732111 1123
Q ss_pred cchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
..++++||+ + ++|.+++. +||.|++++.++.+||+|||+++.....
T Consensus 104 ~~~iv~e~~-~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 104 DVYIVQDLM-E-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp CEEEEEECC-S-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred eEEEEEccc-C-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 578899998 4 46655441 7899999999999999999999876533
Q ss_pred CCe---eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 295 SSN---LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 295 ~~~---~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
... .....||..| .++|||||||+++||+||+.||...
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 211 2334677776 6789999999999999999998643
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-24 Score=202.84 Aligned_cols=203 Identities=18% Similarity=0.222 Sum_probs=128.3
Q ss_pred Hhhcccc-eeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIK-YCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~-~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|... +.||+|+||.||+|+.. +|+.||||++... ....+++..+...+ .|+|++++++++..........
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQAS-GGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHT-TSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhc-CCCChHHHHHHHhhccCCCceE
Confidence 4578874 46999999999999985 6899999998642 22334455555555 8999999999966544456678
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCcccccccc---CCceEEeecccccc
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR---ELEAFVADFGMTMH 290 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~---~~~~ki~DfGla~~ 290 (408)
++++||+ ++|+|.+++. ++|.|++++. ++.+||+|||+++.
T Consensus 102 ~lv~e~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 102 LIIMECM-EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEEEECC-TTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEecc-CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999 8888877662 6888888874 55699999999987
Q ss_pred cCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 291 LYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
.... ......||..| .++|||||||+++||+||+.||................ .........
T Consensus 181 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~- 254 (336)
T 3fhr_A 181 TTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI---RLGQYGFPN- 254 (336)
T ss_dssp C------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------CCCT-
T ss_pred cccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhh---hccccccCc-
Confidence 6432 22345677777 68999999999999999999986432111100000000 000001111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 255 --~~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (336)
T 3fhr_A 255 --PEWSEVSEDAKQLIRLLLKTDPTERLT 281 (336)
T ss_dssp --TTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred --hhhccCCHHHHHHHHHHCCCChhHCcC
Confidence 001122334668889999999999954
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-24 Score=206.09 Aligned_cols=155 Identities=21% Similarity=0.229 Sum_probs=103.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee--ecCCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV--CIKDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~--~~~~~ 246 (408)
++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++++. +|+|++++++++... .....
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 5788899999999999999986 568899999996532 23344567889999987 788888887772210 01124
Q ss_pred cchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 247 CFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
..+++++++ +++|..++ ++||.|++++.++.+||+|||+++.....
T Consensus 108 ~~~lv~e~~--~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~ 185 (367)
T 2fst_X 108 DVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185 (367)
T ss_dssp CCEEEEECC--CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred eEEEEeccc--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence 567788887 24444332 27999999999999999999999875432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
.+...||..| .++|||||||+++||+||+.||...
T Consensus 186 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2334677766 6899999999999999999998643
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-24 Score=199.92 Aligned_cols=156 Identities=20% Similarity=0.240 Sum_probs=112.2
Q ss_pred hhcccceeecccceeEEEEEEeCC-CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEe--------
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDF-------- 240 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~-------- 240 (408)
++|...+.||+|+||.||+|.... |+.||||++... +....+.+.+|++++. +|+|++++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 468888999999999999999854 889999998642 3345678999999997 78888887776311
Q ss_pred --eecCCccchhhhhhcccchhhhhhhc--------------------------------cCccccccc-cCCceEEeec
Q 037624 241 --VCIKDACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGL-RELEAFVADF 285 (408)
Q Consensus 241 --~~~~~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~-~~~~~ki~Df 285 (408)
.+......++++||+ + |+|.+++. ++|.|++++ +++.+||+||
T Consensus 88 ~~~~~~~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYM-E-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp ---CCSCSEEEEEEECC-S-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cccccccCceeEEeecc-C-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 013345678999998 5 56766542 788999997 6789999999
Q ss_pred ccccccCCCCC---eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 286 GMTMHLYCDSS---NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 286 Gla~~~~~~~~---~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
|+++....... ......||..| .++|||||||+++||+||+.||...
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 99987643211 12234556666 5789999999999999999998643
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=209.82 Aligned_cols=151 Identities=21% Similarity=0.300 Sum_probs=103.5
Q ss_pred hhccc-ceeecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDI-KYCFGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~-~~~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
+.|.. .++||+|+||+||+|+.. +++.||||++.... ....+.+|++++. +|+|++++++++. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~ 92 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFL--SHAD 92 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-----CCHHHHHHHHHHHHCCCTTBCCCCEEEE--ETTT
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-----CCHHHHHHHHHHHhcCCCCeeeEeeEEe--cCCC
Confidence 44554 457999999999999975 47789999996432 2357889999987 8888888887721 1446
Q ss_pred ccchhhhhhcccchhhhhhh------------------------------------------ccCcccccc----ccCCc
Q 037624 246 ACFWFMNTWRGEACSVFCTM------------------------------------------IMKPLSWIG----LRELE 279 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l------------------------------------------~~k~~~~~l----~~~~~ 279 (408)
...++++||+ ++ ++.+.+ ++||.|+++ +.++.
T Consensus 93 ~~~~lv~e~~-~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 93 RKVWLLFDYA-EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp TEEEEEEECC-SE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred CeEEEEEeCC-CC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence 6788899998 43 332221 278999999 67899
Q ss_pred eEEeecccccccCCCC---CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 280 AFVADFGMTMHLYCDS---SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~---~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+||+|||+++...... .......||..| .++|||||||++|||+||+.||..
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999998765322 122446778777 579999999999999999999953
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.6e-24 Score=201.72 Aligned_cols=151 Identities=23% Similarity=0.268 Sum_probs=114.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc--
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA-- 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~-- 246 (408)
++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|+.++. +|+|+++++++ +....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~~ 98 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDV----FTPASSL 98 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEE----ECSCSSG
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhhe----Eeccccc
Confidence 4688889999999999999998 468999999997532 23344567889999987 78888888877 44433
Q ss_pred ----cchhhhhhcccchhhhhhh-------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 247 ----CFWFMNTWRGEACSVFCTM-------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ----~~~lv~e~~~~~g~l~~~l-------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||+ + ++|...+ +++|.|++++.++.+||+|||+++..
T Consensus 99 ~~~~~~~lv~e~~-~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 99 RNFYDFYLVMPFM-Q-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp GGCCCCEEEEECC-S-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ccceeEEEEeccc-c-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 247888988 4 4665543 17899999999999999999999875
Q ss_pred CCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
... .....||..| .++|||||||+++||+||+.||...
T Consensus 177 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 177 DAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred CCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 432 2234566666 6899999999999999999998643
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=202.05 Aligned_cols=154 Identities=21% Similarity=0.324 Sum_probs=118.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC---
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK--- 244 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~--- 244 (408)
.++|...+.||+|+||.||+|+.. +|+.||||++... ........+.+|++++. +|+|+++++++ +..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~----~~~~~~ 83 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNI----QRPDSF 83 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEE----CCCSCS
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeee----eccccc
Confidence 467889999999999999999984 6889999999642 23334567889999987 88888888777 433
Q ss_pred --Cccchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 --DACFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 --~~~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++++||+ + ++|.+++. ++|.|++++.++.+||+|||+++.
T Consensus 84 ~~~~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 84 ENFNEVYIIQELM-Q-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp TTCCCEEEEECCC-S-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CccceEEEEEecc-C-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 25678899998 4 46655441 789999999999999999999987
Q ss_pred cCCCCCe----------eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 291 LYCDSSN----------LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 291 ~~~~~~~----------~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
....... .....||..| .++|||||||+++||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 6432111 1224567666 5799999999999999999998643
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-24 Score=207.10 Aligned_cols=150 Identities=17% Similarity=0.175 Sum_probs=113.4
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~~~~ 245 (408)
..|...+.||+|+||.||+|... +++.||||++... ....+.+.+|++++. .+.++++++.++++ +...
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~-~~~~ 171 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN-FTFR 171 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE-EEET
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEee-cccC
Confidence 46888999999999999999874 5889999999642 233567788888775 22344455555444 5556
Q ss_pred ccchhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCc--eEEeecccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELE--AFVADFGMT 288 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~--~ki~DfGla 288 (408)
...++++||+ + ++|.+++. +||.|++++.++. +||+|||++
T Consensus 172 ~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 172 NHICMTFELL-S-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp TEEEEEECCC-C-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred CeEEEEEecc-C-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 7788889988 4 45554431 7999999998877 999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+..... .....||..| .++|||||||+++||+||+.||..
T Consensus 250 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 250 CYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp EETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 765432 2345677777 689999999999999999999864
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=7e-24 Score=199.75 Aligned_cols=196 Identities=18% Similarity=0.179 Sum_probs=127.7
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee----e
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV----C 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~----~ 242 (408)
..+|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++. .|+|+++++++.... .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 34788899999999999999997 46889999998542 2334567889998886 488888888773221 1
Q ss_pred cCCccchhhhhhcccchhhhhhh--------------------------------------ccCccccccccCCceEEee
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM--------------------------------------IMKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l--------------------------------------~~k~~~~~l~~~~~~ki~D 284 (408)
......++++||+ + |+|.+++ ++||.|++++.++++||+|
T Consensus 104 ~~~~~~~lv~e~~-~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 104 TGQAEFLLLTELC-K-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp TSSEEEEEEEECC-S-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred cCCceEEEEEEec-C-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEec
Confidence 3344578888887 4 4554433 2688899999999999999
Q ss_pred cccccccCCCCCe------------eeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccC
Q 037624 285 FGMTMHLYCDSSN------------LTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSS 337 (408)
Q Consensus 285 fGla~~~~~~~~~------------~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~ 337 (408)
||+++........ .....||..| .++|||||||++|||+||+.||........
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 261 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI 261 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence 9999876533211 0123466665 489999999999999999999864321111
Q ss_pred CccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 338 SSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 338 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........... .....+.+++..||+.||++|++
T Consensus 262 ---------~~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps 295 (337)
T 3ll6_A 262 ---------VNGKYSIPPHD-------TQYTVFHSLIRAMLQVNPEERLS 295 (337)
T ss_dssp -------------CCCCTTC-------CSSGGGHHHHHHHSCSSGGGSCC
T ss_pred ---------hcCcccCCccc-------ccchHHHHHHHHHccCChhhCcC
Confidence 00001100000 01122557888999999999954
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=200.73 Aligned_cols=192 Identities=19% Similarity=0.210 Sum_probs=139.5
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCc---chhhHHHHHHHHhc----ccCCcceeeeEeEee
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEP---ASTRSFQNEVDILY----PKYDIETLLSFMDFV 241 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~---~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~ 241 (408)
..++|...+.||+|+||.||+|+. .+++.||||++........ ...+.+.+|+.++. .|+|+++++++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~---- 116 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW---- 116 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE----
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE----
Confidence 346799999999999999999987 5688999999976432221 12345677888876 35888888888
Q ss_pred ecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccc-cCCceEEeeccc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL-RELEAFVADFGM 287 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~-~~~~~ki~DfGl 287 (408)
+......++++|++...++|.+++. ++|.|++++ +++.+||+|||+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 7777788889998844477776552 789999998 789999999999
Q ss_pred ccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCC
Q 037624 288 TMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPR 354 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ 354 (408)
++..... ......||..| .++|||||||+++||+||+.||....... ... ..
T Consensus 197 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----------~~~--~~ 261 (320)
T 3a99_A 197 GALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-----------RGQ--VF 261 (320)
T ss_dssp CEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-----------HCC--CC
T ss_pred ccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh-----------ccc--cc
Confidence 9876532 22345677777 57899999999999999999986421110 000 00
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
... .....+.+++..||+.||++|++
T Consensus 262 ~~~-------~~~~~~~~li~~~l~~dp~~Rps 287 (320)
T 3a99_A 262 FRQ-------RVSSECQHLIRWCLALRPSDRPT 287 (320)
T ss_dssp CSS-------CCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccc-------cCCHHHHHHHHHHccCChhhCcC
Confidence 111 11224667888999999999944
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-24 Score=197.05 Aligned_cols=199 Identities=20% Similarity=0.273 Sum_probs=133.0
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEe------
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDF------ 240 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~------ 240 (408)
-.++|+..+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|++++. +|+|++++++++..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 356899999999999999999997 46889999999642 234577899999997 78888877766211
Q ss_pred ---eecCCccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEe
Q 037624 241 ---VCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVA 283 (408)
Q Consensus 241 ---~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~ 283 (408)
........++++||+ ++++|.+++. ++|.|++++.++.+||+
T Consensus 80 ~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYC-ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ------CEEEEEEEEECC-CSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred hhcccccCCceEEEEecC-CCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEe
Confidence 012245678999999 8888877652 78889999999999999
Q ss_pred ecccccccCCCC--------------CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccccccc
Q 037624 284 DFGMTMHLYCDS--------------SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLS 336 (408)
Q Consensus 284 DfGla~~~~~~~--------------~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~ 336 (408)
|||+++...... .......||..| .++|||||||++|||+| |+.....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~-- 233 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME-- 233 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH--
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh--
Confidence 999998764221 112234566666 68999999999999998 4431100
Q ss_pred CCccccccchhhhccC--CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 337 SSSSSDQNIMLLDVLD--PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.. ..+.. .........+.+++..|++.||++|++
T Consensus 234 ------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps 277 (303)
T 1zy4_A 234 ------RVNILKKLRSVSIEFPP---DFDDNKMKVEKKIIRLLIDHDPNKRPG 277 (303)
T ss_dssp ------HHHHHHHHHSTTCCCCT---TCCTTTSHHHHHHHHHHTCSSGGGSCC
T ss_pred ------HHHHHHhccccccccCc---cccccchHHHHHHHHHHHhcCcccCcC
Confidence 0000111111 11111 111122344668889999999999954
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-25 Score=207.95 Aligned_cols=200 Identities=15% Similarity=0.070 Sum_probs=134.7
Q ss_pred hhcccceeecccceeEEEEEEeCC---------CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCccee------
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS---------SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETL------ 234 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l------ 234 (408)
++|...+.||+|+||.||+|+... ++.||||.+... +.+.+|++++. +|+|++++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 578899999999999999999853 789999998642 46788888886 77777652
Q ss_pred ------eeEeEeeecCCccchhhhhhcccchhhhhhhc-----------------------------------cCccccc
Q 037624 235 ------LSFMDFVCIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWI 273 (408)
Q Consensus 235 ------~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~ 273 (408)
..++++....+...++++||+ +++|.+++. +||.|++
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC--CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred CCccCccchhhccccCCcEEEEEecCC--CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 223444344467788999988 567766652 7889999
Q ss_pred cccCC--ceEEeecccccccCCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 274 GLREL--EAFVADFGMTMHLYCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 274 l~~~~--~~ki~DfGla~~~~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
++.++ .+||+|||+++....... ......||..| .++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99887 999999999987653221 11334788888 5899999999999999999998753
Q ss_pred ccccC-Cccccc--cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 333 SSLSS-SSSSDQ--NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 333 ~~~~~-~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..... ...... ........++.... ......+.+++..||+.||++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps 323 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPCGHW------IRPSETLQKYLKVVMALTYEEKPP 323 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTTSCE------ECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CcCHHHHHHHHHhccCChhhhhhhcccc------CCCcHHHHHHHHHHHhCChhhCCC
Confidence 21100 000000 00000111111000 011245678889999999999944
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-23 Score=203.30 Aligned_cols=152 Identities=16% Similarity=0.172 Sum_probs=111.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-----cCCcceeeeEeEeee-
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-----KYDIETLLSFMDFVC- 242 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-----~~n~~~l~~~~~~~~- 242 (408)
++|...+.||+|+||+||+|+. .+++.||||++... ....+.+.+|++++. + |+++++++.+++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 6799999999999999999987 55889999999642 234567889999886 3 223444444444332
Q ss_pred --cCCccchhhhhhcccchhhhhhh-----------------------------------ccCccccccccCC-------
Q 037624 243 --IKDACFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIGLREL------- 278 (408)
Q Consensus 243 --~~~~~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l~~~~------- 278 (408)
......++|+||+ .++.+.... ++||.|++++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 2456778888887 333222111 2788999988654
Q ss_pred ------------------------------------------ceEEeecccccccCCCCCeeeecccCCCC---------
Q 037624 279 ------------------------------------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY--------- 307 (408)
Q Consensus 279 ------------------------------------------~~ki~DfGla~~~~~~~~~~~~~~gt~~y--------- 307 (408)
.+||+|||+++..... .+...||..|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTS
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcCC
Confidence 8999999999876433 2334677777
Q ss_pred ---cccchhhhhHHHHHHHhCCCCCcc
Q 037624 308 ---EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 308 ---~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.++|||||||++|||+||+.||..
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~ 295 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEP 295 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence 689999999999999999999864
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.1e-24 Score=203.02 Aligned_cols=149 Identities=18% Similarity=0.194 Sum_probs=113.0
Q ss_pred HHhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCC-----cceeeeEeEe
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYD-----IETLLSFMDF 240 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n-----~~~l~~~~~~ 240 (408)
..++|...+.||+|+||+||+|+.. +++.||||+++.. ....+++.+|++++. .|++ ++.+.++
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~--- 124 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH--- 124 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE---
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeee---
Confidence 3578999999999999999999974 5889999999642 233566777887765 3443 5555555
Q ss_pred eecCCccchhhhhhcccchhhhhhh-------------------------------------ccCccccccc--cCCceE
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTM-------------------------------------IMKPLSWIGL--RELEAF 281 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------~~k~~~~~l~--~~~~~k 281 (408)
+......++|+||+ + ++|.+++ ++||.|+++. .++.+|
T Consensus 125 -~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 125 -FMFRNHLCLVFEML-S-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp -EEETTEEEEEEECC-C-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEE
T ss_pred -eccCCceEEEEecC-C-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEE
Confidence 55567788888988 4 3554433 1788999984 578899
Q ss_pred EeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 282 VADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 282 i~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
|+|||+++..... .....||..| .++|||||||+++||+||+.||..
T Consensus 202 L~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 202 IVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp ECCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEeccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999876432 2334677766 689999999999999999999964
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-25 Score=204.82 Aligned_cols=197 Identities=15% Similarity=0.213 Sum_probs=134.8
Q ss_pred HHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
..++|...+.||+|+||.||+|...+ .||+|.+.... ......+.|.+|+.++. +|+|+++++++ +.....
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~----~~~~~~ 103 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFMGA----CMSPPH 103 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCS-CCCCCCCCCCTTGGGGTTCCCTTBCCCCEE----EECSSC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCC-CCHHHHHHHHHHHHHHhcCCCCCEeEEEEE----EecCCc
Confidence 34678889999999999999999854 49999997543 22334566888998887 88898888888 777788
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++++||+ ++++|.+++. ++|.|++++ ++.+||+|||+++....
T Consensus 104 ~~iv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 104 LAIITSLC-KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EEEECBCC-CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eEEEeecc-cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 89999999 8888887763 678888887 67999999999876532
Q ss_pred CC-----CeeeecccCCCC---------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchh
Q 037624 294 DS-----SNLTLLAGTYGY---------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIML 347 (408)
Q Consensus 294 ~~-----~~~~~~~gt~~y---------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 347 (408)
.. .......||..| .++|||||||+++||+||+.||........ ...+
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~ 255 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI------IWQM 255 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH------HHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHh
Confidence 11 111223455554 478999999999999999999864321100 0001
Q ss_pred hhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 348 ~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+..... .....+.+++..||+.+|++|++
T Consensus 256 ~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rpt 289 (319)
T 2y4i_B 256 GTGMKPNLSQI------GMGKEISDILLFCWAFEQEERPT 289 (319)
T ss_dssp HTTCCCCCCCS------SCCTTHHHHHHHHHCSSTTTSCC
T ss_pred ccCCCCCCCcC------CCCHHHHHHHHHHhcCChhhCcC
Confidence 11112222110 11223668889999999999944
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=201.28 Aligned_cols=152 Identities=18% Similarity=0.183 Sum_probs=110.7
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee--cCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC--IKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~--~~~~~ 247 (408)
.+|...+.||+|+||+||+|+...+..||+|++.... +...+|++++. +|+|++++.+++.... .....
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~-------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc-------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 3588889999999999999999777779999986422 12236888876 8888888877732211 12223
Q ss_pred chhhhhhcccchhhhhhh------------------------------------ccCccccccc-cCCceEEeecccccc
Q 037624 248 FWFMNTWRGEACSVFCTM------------------------------------IMKPLSWIGL-RELEAFVADFGMTMH 290 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l------------------------------------~~k~~~~~l~-~~~~~ki~DfGla~~ 290 (408)
.++++||+ +++.+.... ++||.|++++ .++.+||+|||+|+.
T Consensus 113 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 113 LNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeecc-CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 67899998 544221110 2799999999 899999999999987
Q ss_pred cCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 291 LYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
...... .....||..| .++|||||||+++||++|+.||...
T Consensus 192 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 192 LIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp CCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 643322 2234556555 6899999999999999999999643
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=204.57 Aligned_cols=150 Identities=22% Similarity=0.260 Sum_probs=109.3
Q ss_pred hcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec--CCcc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI--KDAC 247 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~--~~~~ 247 (408)
.|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++. +|+|++++.+++..... ....
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 5788899999999999999985 58999999986421 22346888886 78888888776322111 1223
Q ss_pred chhhhhhcccchhhhhhh-------------------------------------ccCccccccccC-CceEEeeccccc
Q 037624 248 FWFMNTWRGEACSVFCTM-------------------------------------IMKPLSWIGLRE-LEAFVADFGMTM 289 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l-------------------------------------~~k~~~~~l~~~-~~~ki~DfGla~ 289 (408)
.++++||+ +++ +...+ ++||.|++++.+ +.+||+|||+++
T Consensus 128 ~~lv~e~~-~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 128 LNLVLDYV-PET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEEECC-CEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeehhcc-ccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 56788888 442 21110 289999999954 678999999998
Q ss_pred ccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCccc
Q 037624 290 HLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELL 332 (408)
Q Consensus 290 ~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~ 332 (408)
....... .....||..| .++|||||||++|||+||+.||...
T Consensus 206 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 206 QLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp ECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 7643322 2334677776 6889999999999999999999643
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-23 Score=203.27 Aligned_cols=192 Identities=17% Similarity=0.194 Sum_probs=130.4
Q ss_pred cccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCccchh
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++. +|+|+++++++ +..+...++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~----~~~~~~~~l 86 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCS----ETTDRFLYI 86 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEE----EECSSEEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEE----EecCCeEEE
Confidence 3446889999999998776678999999998642 2356788998885 68888888777 777788899
Q ss_pred hhhhcccchhhhhhhc----------------------------------------cCcccccccc-------------C
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLR-------------E 277 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~-------------~ 277 (408)
++||+ + |+|.+++. +||.|++++. +
T Consensus 87 v~E~~-~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 87 ALELC-N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp EECCC-S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred EEecC-C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCc
Confidence 99998 4 46654431 7888888864 4
Q ss_pred CceEEeecccccccCCCCCe----eeecccCCCC-------------------cccchhhhhHHHHHHHh-CCCCCcccc
Q 037624 278 LEAFVADFGMTMHLYCDSSN----LTLLAGTYGY-------------------EKCDVYSFGVVALEILM-GRQPGELLS 333 (408)
Q Consensus 278 ~~~ki~DfGla~~~~~~~~~----~~~~~gt~~y-------------------~k~DVySfGvvl~Ellt-g~~p~~~~~ 333 (408)
+++||+|||+++........ .....||.+| .++|||||||+++||+| |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 58999999999987543221 2345677777 36999999999999999 999986421
Q ss_pred cccCCccccccchhhhccC-CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 334 SLSSSSSSDQNIMLLDVLD-PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.. ....+....+ +.+.. .........+.+++..|++.||++|++
T Consensus 245 ~~-------~~~i~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps 289 (434)
T 2rio_A 245 SR-------ESNIIRGIFSLDEMKC---LHDRSLIAEATDLISQMIDHDPLKRPT 289 (434)
T ss_dssp TH-------HHHHHHTCCCCCCCTT---CCCHHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred hh-------HHHHhcCCCCcccccc---cccccchHHHHHHHHHHhhCChhhCCC
Confidence 10 0000111111 11111 111233456778899999999999944
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=195.82 Aligned_cols=195 Identities=20% Similarity=0.248 Sum_probs=131.8
Q ss_pred HHHHHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCc---chhhHHHHHHHHhc------ccCCcceeee
Q 037624 167 IIEATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEP---ASTRSFQNEVDILY------PKYDIETLLS 236 (408)
Q Consensus 167 l~~at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~---~~~~~~~~E~~~l~------~~~n~~~l~~ 236 (408)
.....++|...+.||+|+||.||+|+. .+++.||||++........ .....+.+|+.++. +|+|++++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999987 5688999999975432111 12334566777664 4888888887
Q ss_pred EeEeeecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccc-cCCceEE
Q 037624 237 FMDFVCIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL-RELEAFV 282 (408)
Q Consensus 237 ~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~-~~~~~ki 282 (408)
+ +......++++|+...+++|.+++. +++.|++++ +++.+||
T Consensus 106 ~----~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 W----FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp E----C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEE
T ss_pred E----EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEE
Confidence 7 6667777888888327888877652 788999998 8899999
Q ss_pred eecccccccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhh
Q 037624 283 ADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 283 ~DfGla~~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
+|||+++...... .....||..| .++|||||||+++||+||+.||.....
T Consensus 182 ~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------------- 244 (312)
T 2iwi_A 182 IDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------------- 244 (312)
T ss_dssp CCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---------------
T ss_pred EEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH---------------
Confidence 9999998765432 3345678777 379999999999999999999863211
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+.....+ . .....+.+++..||+.+|++|++
T Consensus 245 ~~~~~~~~~--~---~~~~~~~~li~~~l~~~p~~Rps 277 (312)
T 2iwi_A 245 ILEAELHFP--A---HVSPDCCALIRRCLAPKPSSRPS 277 (312)
T ss_dssp HHHTCCCCC--T---TSCHHHHHHHHHHTCSSTTTSCC
T ss_pred HhhhccCCc--c---cCCHHHHHHHHHHccCChhhCcC
Confidence 111111110 0 11234567888999999999944
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=204.06 Aligned_cols=194 Identities=16% Similarity=0.200 Sum_probs=130.4
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|++++. +|+|+++++++ +.....
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~l~~~----~~~~~~ 92 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC------FSFADREVQLLRESDEHPNVIRYFCT----EKDRQF 92 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT------EEECHHHHHHHHHSCCCTTBCCEEEE----EEETTE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH------HHHHHHHHHHHHhccCCCCcCeEEEE----EecCCE
Confidence 34688889999999999665555678999999996422 234668888886 68888888777 677778
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccc-----cCCceEEeecccc
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL-----RELEAFVADFGMT 288 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~-----~~~~~ki~DfGla 288 (408)
.++++||+ + |+|.+++. +||.|+++. ....+||+|||++
T Consensus 93 ~~lv~E~~-~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 93 QYIAIELC-A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EEEEEECC-S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EEEEEECC-C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 89999998 4 46665552 788999984 3456889999999
Q ss_pred cccCCCCC---eeeecccCCCC---------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhh
Q 037624 289 MHLYCDSS---NLTLLAGTYGY---------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLD 349 (408)
Q Consensus 289 ~~~~~~~~---~~~~~~gt~~y---------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 349 (408)
+....... ......||.+| .++|||||||+++||+| |+.||...... .......
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~~ 243 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILLG 243 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHTT
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHhc
Confidence 87754321 23456788888 37999999999999999 99998532110 0000001
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 350 VLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 350 ~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
........+ .......+.+++..||+.||++|++
T Consensus 244 ~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps 277 (432)
T 3p23_A 244 ACSLDCLHP----EKHEDVIARELIEKMIAMDPQKRPS 277 (432)
T ss_dssp CCCCTTSCT----TCHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred cCCccccCc----cccccHHHHHHHHHHHhCCHhhCCC
Confidence 111111111 1122334568889999999999944
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=194.29 Aligned_cols=195 Identities=19% Similarity=0.227 Sum_probs=119.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHH-HHhc--ccCCcceeeeEeEeeecCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEV-DILY--PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~-~~l~--~~~n~~~l~~~~~~~~~~~~ 246 (408)
.++|...+.||+|+||.||+|+.. +|+.||||++.... .......+..|. .++. +|+|+++++++ +..+.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~----~~~~~ 97 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--NKEENKRILMDLDVVLKSHDCPYIVQCFGT----FITNT 97 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEE----EECSS
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCceeeEEEE----EecCC
Confidence 357888999999999999999984 68899999997532 112223333443 3343 78888888887 67777
Q ss_pred cchhhhhhcccchhhhhh-----------------------------------hccCccccccccCCceEEeeccccccc
Q 037624 247 CFWFMNTWRGEACSVFCT-----------------------------------MIMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~-----------------------------------l~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||++ . .+... .+++|.|++++.++++||+|||+++..
T Consensus 98 ~~~lv~e~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 98 DVFIAMELMG-T-CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EEEEEECCCS-E-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred cEEEEEeccC-C-cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 8888888873 1 11100 027899999999999999999999766
Q ss_pred CCCCCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC--
Q 037624 292 YCDSSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD-- 352 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d-- 352 (408)
.... ......||..| .++|||||||+++||+||+.||..... ....+..+..
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~ 246 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--------DFEVLTKVLQEE 246 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--------HHHHHHHHHHSC
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--------cHHHHHHHhccC
Confidence 4322 22234566666 479999999999999999999864211 0011111111
Q ss_pred -CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 -PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 -~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+... ......+.+++..||+.||++|++
T Consensus 247 ~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps 277 (318)
T 2dyl_A 247 PPLLPGH-----MGFSGDFQSFVKDCLTKDHRKRPK 277 (318)
T ss_dssp CCCCCSS-----SCCCHHHHHHHHHHTCSCTTTSCC
T ss_pred CCCCCcc-----CCCCHHHHHHHHHHccCChhHCcC
Confidence 111110 011234667889999999999944
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-23 Score=213.92 Aligned_cols=184 Identities=17% Similarity=0.245 Sum_probs=137.4
Q ss_pred hhcccceeecccceeEEEEEEeC--CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT--SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~--~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||.||+|... +|+.||||++... .+....+.|.+|++++. +|+|+++++++ +.....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~----~~~~~~ 153 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNF----VEHTDR 153 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEE----EEEECT
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeee----EeecCC
Confidence 67999999999999999999985 5889999998642 23345567899999997 78888888887 333332
Q ss_pred -----chhhhhhcccchhhhhhhc-------------------------------cCccccccccCCceEEeeccccccc
Q 037624 248 -----FWFMNTWRGEACSVFCTMI-------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 248 -----~~lv~e~~~~~g~l~~~l~-------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
.++|+||+ ++++|.+++. +||.|++++.+ .+||+|||+++..
T Consensus 154 ~~~~~~~lv~E~~-~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 154 HGDPVGYIVMEYV-GGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp TSCEEEEEEEECC-CCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred CCCceeEEEEEeC-CCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 68999999 8888876542 78999999875 9999999999876
Q ss_pred CCCCCeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 292 YCDSSNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... ....||++| .++|||||||+++||++|..|+..... . .+...
T Consensus 232 ~~~----~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~-~-----------------~~~~~-- 287 (681)
T 2pzi_A 232 NSF----GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYV-D-----------------GLPED-- 287 (681)
T ss_dssp TCC----SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEEC-S-----------------SCCTT--
T ss_pred ccC----CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccc-c-----------------ccccc--
Confidence 433 345789888 589999999999999999888653110 0 00000
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..||+.||++|++
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~ 314 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFT 314 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCS
T ss_pred ccccccCHHHHHHHhhhccCChhhCCC
Confidence 111222345778889999999999954
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-23 Score=210.90 Aligned_cols=212 Identities=18% Similarity=0.175 Sum_probs=139.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee--ecCCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV--CIKDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~--~~~~~ 246 (408)
++|...+.||+|+||.||+|.. .+|+.||||++... ......+.|.+|++++. +|+|++++.++.... +..+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 6799999999999999999998 45889999998753 23345677999999997 888888887772210 12266
Q ss_pred cchhhhhhcccchhhhhhhc------------------------------------cCccccccccCC---ceEEeeccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI------------------------------------MKPLSWIGLREL---EAFVADFGM 287 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~------------------------------------~k~~~~~l~~~~---~~ki~DfGl 287 (408)
..++++||+ ++|+|.+++. ++|.|++++.++ .+||+|||+
T Consensus 92 ~~~LVmEy~-~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 92 LPLLAMEYC-EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SCCCEEECC-SSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred eEEEEEEeC-CCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 778999999 8888877652 678888888554 499999999
Q ss_pred ccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCcc-c----cccchhhhc
Q 037624 288 TMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSS-S----DQNIMLLDV 350 (408)
Q Consensus 288 a~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~----~~~~~~~~~ 350 (408)
++...... ......||.+| .++|||||||++|||+||+.||........+.. . .......+.
T Consensus 171 a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 171 AKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred cccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 98765432 22345677777 689999999999999999999864211100000 0 000000010
Q ss_pred cC------CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 351 LD------PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 351 ~d------~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.. ..+..+ ..........+.+++..|++.||++|+++
T Consensus 250 l~g~~~~~~~lp~p-~~l~~~ls~~L~dLI~~mL~~DP~kRPTa 292 (676)
T 3qa8_A 250 LTGAVKFSSVLPTP-NHLSGILAGKLERWLQCMLMWHQRQRGTD 292 (676)
T ss_dssp CSSSCCCCSSSCCS-CCCCGGGHHHHHHHHHHHSCSSCC---CC
T ss_pred hccccccccccCCc-hhhchhhhHHHHHHHHHHccCCHhhCcCH
Confidence 11 111111 01122344567788899999999999443
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-23 Score=193.82 Aligned_cols=147 Identities=19% Similarity=0.273 Sum_probs=112.4
Q ss_pred hhcccceeecccceeEEEEEEe--CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCC------cceeeeEeEee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL--TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYD------IETLLSFMDFV 241 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~--~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n------~~~l~~~~~~~ 241 (408)
++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++. +|++ +++++++
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~---- 85 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW---- 85 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEE----
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecc----
Confidence 4788899999999999999987 36889999998642 234567888998886 4443 5555555
Q ss_pred ecCCccchhhhhhcccchhhhhhhc-----------------------------------cCcccccccc----------
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR---------- 276 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~---------- 276 (408)
+......++++||+ ++++.+++. +||.|++++.
T Consensus 86 ~~~~~~~~lv~e~~--~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 86 FEHHGHICIVFELL--GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp EEETTEEEEEEECC--CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred cccCCcEEEEEcCC--CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCc
Confidence 56667788999988 345554431 7888998875
Q ss_pred ---------CCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 277 ---------ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 277 ---------~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
++.+||+|||+++..... .....||..| .++|||||||+++||+||+.||..
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 236 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 678999999999875432 2334677766 689999999999999999999864
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-23 Score=195.04 Aligned_cols=151 Identities=17% Similarity=0.173 Sum_probs=111.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-----------cCCcceeeeE
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-----------KYDIETLLSF 237 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-----------~~n~~~l~~~ 237 (408)
++|...+.||+|+||+||+|+. .+++.||||++... ....+.+.+|++++. . |+|+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 4788899999999999999997 56889999998642 234567888888875 2 7788888887
Q ss_pred eEeeecCCccchhhhhhcccchhhhhhh------------------------------------ccCccccccc------
Q 037624 238 MDFVCIKDACFWFMNTWRGEACSVFCTM------------------------------------IMKPLSWIGL------ 275 (408)
Q Consensus 238 ~~~~~~~~~~~~lv~e~~~~~g~l~~~l------------------------------------~~k~~~~~l~------ 275 (408)
+..........++++||+ +++|.+++ ++||.|++++
T Consensus 95 ~~~~~~~~~~~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL--GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEETTEEEEEEEECCC--CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred hhccCCCCceEEEEEecC--CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 443222233667777776 23333322 2788899984
Q ss_pred cCCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 276 RELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 276 ~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.++.+||+|||+++..... .....||..| .++|||||||+++||+||+.||..
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp TEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4458999999999876432 2334677777 689999999999999999999964
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-22 Score=192.87 Aligned_cols=194 Identities=12% Similarity=0.051 Sum_probs=120.5
Q ss_pred HHhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--cc-CCccee------eeEeE
Q 037624 170 ATEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PK-YDIETL------LSFMD 239 (408)
Q Consensus 170 at~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~-~n~~~l------~~~~~ 239 (408)
.+.+|...+.||+|+||+||+|+. .+|+.||||++...........+.|.+|+.++. +| .|...+ +...+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345677889999999999999996 568999999987544334445678999999886 33 111100 00000
Q ss_pred eeec-----------C-----Cccchhhhhhcccchhhhhhh--------------------------------------
Q 037624 240 FVCI-----------K-----DACFWFMNTWRGEACSVFCTM-------------------------------------- 265 (408)
Q Consensus 240 ~~~~-----------~-----~~~~~lv~e~~~~~g~l~~~l-------------------------------------- 265 (408)
.... . ....+++++++ .++|.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ii 233 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM--QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV 233 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh--cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 0000 0 00112222211 12222111
Q ss_pred --ccCccccccccCCceEEeecccccccCCCCCeeeecccCCCC----------------------cccchhhhhHHHHH
Q 037624 266 --IMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY----------------------EKCDVYSFGVVALE 321 (408)
Q Consensus 266 --~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y----------------------~k~DVySfGvvl~E 321 (408)
++||.|++++.++.+||+|||+++..... ....+| ..| .++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 38999999999999999999999865422 334456 666 18999999999999
Q ss_pred HHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 322 ILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 322 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
|+||+.||........ ...++..... ....+.+++..||+.||++|++
T Consensus 310 lltg~~Pf~~~~~~~~---------~~~~~~~~~~---------~~~~~~~li~~~l~~dP~~Rpt 357 (413)
T 3dzo_A 310 IWCADLPNTDDAALGG---------SEWIFRSCKN---------IPQPVRALLEGFLRYPKEDRLL 357 (413)
T ss_dssp HHHSSCCCCTTGGGSC---------SGGGGSSCCC---------CCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHCCCCCCCcchhhh---------HHHHHhhccc---------CCHHHHHHHHHHccCChhhCcC
Confidence 9999999864322111 1112221111 1134668888999999999944
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-22 Score=188.84 Aligned_cols=150 Identities=21% Similarity=0.228 Sum_probs=110.0
Q ss_pred hhcccceeecccceeEEEEEEeC-CC-cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCc---ceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SS-KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDI---ETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g-~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~---~~l~~~~~~~~~~ 244 (408)
++|...+.||+|+||.||+|... ++ +.||||+++.. ....+.+.+|++++. +|++. ..++.++++ +..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~-~~~ 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDW-FNF 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE-EEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee-eee
Confidence 57888999999999999999974 34 68999999642 234567888988886 44442 123333333 555
Q ss_pred Cccchhhhhhcccchhhhhhh-----------------------------------ccCcccccc---------------
Q 037624 245 DACFWFMNTWRGEACSVFCTM-----------------------------------IMKPLSWIG--------------- 274 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l-----------------------------------~~k~~~~~l--------------- 274 (408)
....++++||+ .++ +.+++ ++||.|+++
T Consensus 94 ~~~~~lv~e~~-~~~-l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 94 HGHMCIAFELL-GKN-TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp TTEEEEEEECC-CCB-HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred CCeEEEEEecc-CCC-hHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence 66778888988 433 32222 178999998
Q ss_pred ----ccCCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 275 ----LRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 275 ----~~~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+.++.+||+|||+++..... .....||..| .++|||||||+++||+||+.||..
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 56889999999999875432 2335677777 689999999999999999999864
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.7e-21 Score=180.77 Aligned_cols=198 Identities=12% Similarity=-0.000 Sum_probs=131.8
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCC-----CcchhhHHHHHHHHhc--c---------cCCccee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENE-----EPASTRSFQNEVDILY--P---------KYDIETL 234 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~-----~~~~~~~~~~E~~~l~--~---------~~n~~~l 234 (408)
.++|...+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|++++. + |+|++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 7899999999764321 2234477889988875 2 5555554
Q ss_pred eeEe--------------Eeeec------------CCccchhhhhhcccchhhhhhh-----------------------
Q 037624 235 LSFM--------------DFVCI------------KDACFWFMNTWRGEACSVFCTM----------------------- 265 (408)
Q Consensus 235 ~~~~--------------~~~~~------------~~~~~~lv~e~~~~~g~l~~~l----------------------- 265 (408)
.+.. +++.. .....++|+||+ ++|++...+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~-~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE-FGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE-CCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec-CCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 4431 11110 256788999998 777544433
Q ss_pred ----------ccCccccccccCC--------------------ceEEeecccccccCCCCCeeeecccCCCC--------
Q 037624 266 ----------IMKPLSWIGLREL--------------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY-------- 307 (408)
Q Consensus 266 ----------~~k~~~~~l~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~gt~~y-------- 307 (408)
++||.|++++.++ .+||+|||+|+..... ...||..|
T Consensus 177 lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 177 AEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGGCC
T ss_pred HHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhhcC
Confidence 1789999999776 9999999999976432 24678777
Q ss_pred ---cccchhhhhHH-HHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCC
Q 037624 308 ---EKCDVYSFGVV-ALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSN 381 (408)
Q Consensus 308 ---~k~DVySfGvv-l~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~ 381 (408)
.++||||+|++ ..++++|..||....+... ...........+.... ..........+.+++..|++.|
T Consensus 252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY----LTDKMLKQMTFKTKCN--TPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH----HHHHHHHTCCCSSCCC--SHHHHHHHHHHHHHHHHGGGSS
T ss_pred CCccceehhhhhCCCCcccccccCCCcchhhhhH----HHHhhhhhhccCcccc--hhhhhhcCHHHHHHHHHHhccC
Confidence 58999998777 7788999999854211110 0000000111111111 1333455667889999999976
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.5e-17 Score=172.12 Aligned_cols=98 Identities=37% Similarity=0.560 Sum_probs=95.4
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|..++++++|+.||||+|+++|.+|.++++++.| .|||++|+|+|.||.+++++++|+.|||++|+++|.+|..++.+
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 67889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred c-cceeEeeccccccCCCcc
Q 037624 81 P-LSYLDLSFNDLSGGIPKH 99 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~ 99 (408)
+ |+.|++++|+++|.+|..
T Consensus 704 ~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CCCSEEECCSSEEEEECCSS
T ss_pred CCCCEEECcCCcccccCCCc
Confidence 9 999999999999999975
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.7e-17 Score=164.29 Aligned_cols=145 Identities=13% Similarity=-0.015 Sum_probs=95.8
Q ss_pred eecccceeEEEEEEe-CCCcEEEEEecccccCC-------CcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 179 CFGTGGYGSVYIAQL-TSSKVIALKKLHHWENE-------EPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 179 ~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~-------~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
..+.|+.|.++.++- --|+.+|||.+...... .....++|.+|+++|. .|+|+++++.+ ..++..
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~----~ed~~~ 316 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH----GENAQS 316 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE----EECSSE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE----EEECCE
Confidence 356677776665543 34788999999753211 1234567999999997 67888888888 788889
Q ss_pred chhhhhhcccchhhhhhhc------------------------------cCccccccccCCceEEeecccccccCCCCCe
Q 037624 248 FWFMNTWRGEACSVFCTMI------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN 297 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~ 297 (408)
.|+||||+ ++++|.+.+. +||.|+++++++++||+|||+|+....+...
T Consensus 317 ~yLVMEyv-~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~ 395 (569)
T 4azs_A 317 GWLVMEKL-PGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395 (569)
T ss_dssp EEEEEECC-CSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CC
T ss_pred EEEEEecC-CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc
Confidence 99999999 9999999883 8999999999999999999999987655555
Q ss_pred eeecccCCCC-----------cccchhhhhHHHHHHHhCCCC
Q 037624 298 LTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQP 328 (408)
Q Consensus 298 ~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p 328 (408)
.++.+||++| .++|+||.|++++++.++..+
T Consensus 396 ~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 396 PTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp SHHHHHHHHHHHHHHC-----------------CCCCTTHHH
T ss_pred ccCceechhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence 5667888888 578999999998887766544
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=9.6e-16 Score=160.08 Aligned_cols=70 Identities=44% Similarity=0.578 Sum_probs=41.1
Q ss_pred ccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEeeccccccCCCcccccc
Q 037624 34 TSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 34 ~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
++| .|||++|+++|.+|.+++++++|+.|+|++|+++|.+|..++.++ |+.||+++|+++|.+|..+..+
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 344 455555555555665666666666666666666666666666665 6666666666666666555444
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.9e-15 Score=130.53 Aligned_cols=102 Identities=25% Similarity=0.262 Sum_probs=78.2
Q ss_pred CCccccCCccCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
||..+.. +|+.|+|++|++++..|. .++.+++| .|+|++|+|++..|..|.++++|++|+|++|++++..|..+..
T Consensus 23 ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 100 (192)
T 1w8a_A 23 IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG 100 (192)
T ss_dssp CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTT
T ss_pred CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcC
Confidence 5665543 788888888888754443 37788888 8888888888777888888888888888888888777777888
Q ss_pred cc-cceeEeeccccccCCCcccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
++ |+.|++++|++++..|..+..+..
T Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~ 127 (192)
T 1w8a_A 101 LHQLKTLNLYDNQISCVMPGSFEHLNS 127 (192)
T ss_dssp CTTCCEEECCSSCCCEECTTSSTTCTT
T ss_pred CCCCCEEECCCCcCCeeCHHHhhcCCC
Confidence 88 888888888888877776665543
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.59 E-value=9.7e-16 Score=142.85 Aligned_cols=103 Identities=33% Similarity=0.552 Sum_probs=91.9
Q ss_pred CCccccCCccCCeEeccC-CccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLEIGSLRNLVSLYLSG-NNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~-N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+|+.|+++++|++|+|++ |+++|.+|..++++++| +|+|++|+++|.+|..++++++|++|+|++|.++|.+|..++.
T Consensus 68 ~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred cChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 688899999999999995 99999999999999999 8999999999999999999999999999999999999999999
Q ss_pred cc-cceeEeeccccccCCCccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
++ |+.|++++|.++|.+|..+..+.
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~ 173 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCC
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhh
Confidence 98 99999999999988888776543
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-15 Score=140.23 Aligned_cols=104 Identities=22% Similarity=0.246 Sum_probs=83.6
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||.+++++++|+.|+|++|+++ .+|..++.+++| .|+|++|++.|.+|..++++++|+.|+|++|++.+.+|..++.
T Consensus 197 ~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~ 275 (328)
T 4fcg_A 197 SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHR 275 (328)
T ss_dssp CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGG
T ss_pred cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhc
Confidence 36777888888888888888888 477778888888 7888888888888888888888888888888888888888888
Q ss_pred cc-cceeEeeccccccCCCcccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
++ |+.|++++|++.+.+|..+..+..
T Consensus 276 l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 276 LTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp CTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred CCCCCEEeCCCCCchhhccHHHhhccC
Confidence 88 888888888888888887766554
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-15 Score=141.52 Aligned_cols=103 Identities=33% Similarity=0.549 Sum_probs=97.0
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
.+|.+|+++++|++|+|++|+++|.+|..++.+++| +|+|++|+++|.+|..++++++|++|+|++|+++|.+|..++.
T Consensus 92 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 171 (313)
T 1ogq_A 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171 (313)
T ss_dssp CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC
T ss_pred cCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhh
Confidence 378899999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred cc--cceeEeeccccccCCCcccccc
Q 037624 80 LP--LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 80 ~~--l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
++ |+.|++++|.+++.+|..+...
T Consensus 172 l~~~L~~L~L~~N~l~~~~~~~~~~l 197 (313)
T 1ogq_A 172 FSKLFTSMTISRNRLTGKIPPTFANL 197 (313)
T ss_dssp CCTTCCEEECCSSEEEEECCGGGGGC
T ss_pred hhhcCcEEECcCCeeeccCChHHhCC
Confidence 86 9999999999999999887654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=125.41 Aligned_cols=92 Identities=27% Similarity=0.319 Sum_probs=87.4
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++++++|++|+|++|++++..|..+..+++| .|+|++|+|++..|..+.++++|++|+|++|++++.+|..+..++ |+
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC
Confidence 8899999999999999998889999999999 999999999988888899999999999999999999999999999 99
Q ss_pred eeEeeccccccCCC
Q 037624 84 YLDLSFNDLSGGIP 97 (408)
Q Consensus 84 ~l~l~~n~l~g~~p 97 (408)
.|++++|++++..+
T Consensus 130 ~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 130 SLNLASNPFNCNCH 143 (192)
T ss_dssp EEECTTCCBCCSGG
T ss_pred EEEeCCCCccCcCc
Confidence 99999999997654
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-14 Score=121.98 Aligned_cols=95 Identities=25% Similarity=0.261 Sum_probs=79.3
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||.++. ++|+.|+|++|+|++..|..|..+++| +|+|++|+|++..|..+.++++|++|+|++|+|++..|..+..
T Consensus 23 ~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 100 (170)
T 3g39_A 23 SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDN 100 (170)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcC
Confidence 3676664 789999999999997778889999999 8999999999555556788999999999999999777777888
Q ss_pred cc-cceeEeeccccccCCC
Q 037624 80 LP-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p 97 (408)
++ |+.|++++|++++..+
T Consensus 101 l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 101 LKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CTTCCEEECCSSCBCTTBG
T ss_pred CCCCCEEEeCCCCCCCCch
Confidence 88 9999999999886543
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-14 Score=121.61 Aligned_cols=94 Identities=22% Similarity=0.272 Sum_probs=77.5
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||.++. ++|+.|+|++|+|++..|..|+.+++| .|+|++|+|++..|..+.++++|++|+|++|+|++..|..+..
T Consensus 26 ~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 103 (174)
T 2r9u_A 26 SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDN 103 (174)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhcc
Confidence 4677765 789999999999997778889999999 8999999999543334688999999999999999666666888
Q ss_pred cc-cceeEeeccccccCC
Q 037624 80 LP-LSYLDLSFNDLSGGI 96 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~ 96 (408)
++ |+.|++++|++....
T Consensus 104 l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 104 LKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CTTCSEEECCSSCBCTTB
T ss_pred ccCCCEEEeCCCCccccc
Confidence 88 999999999988543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-14 Score=126.79 Aligned_cols=102 Identities=19% Similarity=0.146 Sum_probs=84.0
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
|+++++|+.|+|++|++++..|..|..+++| .|+|++|++++..|..+.++++|++|+|++|++++..|..+..++ |+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 6788888888888888887666688888888 888888888866666788888888999998888888888888888 88
Q ss_pred eeEeeccccccCCCcccccccccc
Q 037624 84 YLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 84 ~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
.|++++|++++..|..+..+...+
T Consensus 133 ~L~L~~N~l~~~~~~~~~~l~~L~ 156 (220)
T 2v70_A 133 LLSLYDNQITTVAPGAFDTLHSLS 156 (220)
T ss_dssp EEECTTSCCCCBCTTTTTTCTTCC
T ss_pred EEECCCCcCCEECHHHhcCCCCCC
Confidence 889988888887787776654433
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.8e-14 Score=123.18 Aligned_cols=104 Identities=26% Similarity=0.303 Sum_probs=89.2
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||.++. ++|+.|+|++|+++ .+|..+..+++| .|+|++|++++..|..|.++++|++|+|++|++++..|..+..
T Consensus 24 ~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 100 (193)
T 2wfh_A 24 VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDG 100 (193)
T ss_dssp SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT
T ss_pred cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCC
Confidence 3676654 68999999999999 899999999999 9999999999777778999999999999999999888888999
Q ss_pred cc-cceeEeeccccccCCCcccccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
++ |+.|++++|.++...+..+..+...+
T Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (193)
T 2wfh_A 101 LKSLRLLSLHGNDISVVPEGAFNDLSALS 129 (193)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTCTTCC
T ss_pred CCCCCEEECCCCCCCeeChhhhhcCcccc
Confidence 99 99999999999976665666554433
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.6e-14 Score=121.85 Aligned_cols=95 Identities=26% Similarity=0.262 Sum_probs=84.7
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
.||..|.++++|+.|+|++|++++..|..|..+++| .|+|++|+|++..|..|..+++|+.|+|++|.+++..+..+..
T Consensus 45 ~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 124 (193)
T 2wfh_A 45 LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFND 124 (193)
T ss_dssp SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT
T ss_pred hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhc
Confidence 478889999999999999999997777789999999 9999999999777778999999999999999999666667888
Q ss_pred cc-cceeEeeccccccC
Q 037624 80 LP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~ 95 (408)
++ |+.|++++|++.+.
T Consensus 125 l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 125 LSALSHLAIGANPLYCD 141 (193)
T ss_dssp CTTCCEEECCSSCEECS
T ss_pred CccccEEEeCCCCeecC
Confidence 98 99999999998854
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.1e-14 Score=125.66 Aligned_cols=94 Identities=20% Similarity=0.155 Sum_probs=87.8
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
..|+++++|++|+|++|++++..|..+..+++| +|+|++|++++..|..+..+++|++|+|++|++++..|..+..++
T Consensus 75 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 154 (220)
T 2v70_A 75 GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 154 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTT
T ss_pred HHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCC
Confidence 468999999999999999997777779999999 999999999988899999999999999999999999999999999
Q ss_pred cceeEeeccccccCCC
Q 037624 82 LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p 97 (408)
|+.|++++|++++..+
T Consensus 155 L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 155 LSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCEEECCSCCEECSGG
T ss_pred CCEEEecCcCCcCCCc
Confidence 9999999999997654
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.4e-14 Score=124.05 Aligned_cols=99 Identities=22% Similarity=0.196 Sum_probs=71.1
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
.|..+++|+.|+|++|++++..|..|..+++| .|+|++|+|+ .+|. .+..+++|++|+|++|++++..|..+..++
T Consensus 51 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 129 (220)
T 2v9t_B 51 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 129 (220)
T ss_dssp SSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred HhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCC
Confidence 46677777777777777776667777777777 7777777777 4454 356677777777777777777777777777
Q ss_pred cceeEeeccccccCCCccccccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
|+.|++++|.+++..+..+..+.
T Consensus 130 L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 130 LNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCT
T ss_pred CCEEECCCCcCCEECHHHHhCCC
Confidence 77777777777766665555443
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.49 E-value=4.1e-14 Score=132.65 Aligned_cols=101 Identities=25% Similarity=0.417 Sum_probs=74.7
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
.||++++++++|++|+|++|+++ .+|..++.+++| +|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 95 ~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~ 172 (328)
T 4fcg_A 95 QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172 (328)
T ss_dssp SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEE
T ss_pred hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhh
Confidence 36777777777777777777777 777777777777 7777777777 77777777777777777777777777776654
Q ss_pred ---------cc-cceeEeeccccccCCCccccccc
Q 037624 80 ---------LP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 80 ---------~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
++ |+.|++++|.++ .+|..+..+.
T Consensus 173 ~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~ 206 (328)
T 4fcg_A 173 TDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQ 206 (328)
T ss_dssp EC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCT
T ss_pred ccchhhhccCCCCCEEECcCCCcC-cchHhhcCCC
Confidence 66 777777777777 6666655444
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-14 Score=144.14 Aligned_cols=147 Identities=11% Similarity=0.049 Sum_probs=105.3
Q ss_pred cceeecccceeEEEEEEeCCCcEEEEEecccccCCCc-----chhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 176 IKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEP-----ASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~-----~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
..+.||+|+||.||+|.. .++.+|+|+......... ...+.|.+|++++. +|+|++.+..+ +......
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~----~~~~~~~ 414 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIF----DVDLDNK 414 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEE----EEETTTT
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEE----EEeCCcc
Confidence 356899999999999965 567889998754222111 12455899999997 88888866555 4566677
Q ss_pred hhhhhhcccchhhhhhhc-------------------------cCccccccccCCceEEeecccccccCCCCCe------
Q 037624 249 WFMNTWRGEACSVFCTMI-------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN------ 297 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~------ 297 (408)
++++||+ ++++|.+++. +||.|+++++ ++||+|||+++........
T Consensus 415 ~lVmE~~-~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~ 491 (540)
T 3en9_A 415 RIMMSYI-NGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIV 491 (540)
T ss_dssp EEEEECC-CSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHH
T ss_pred EEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhh
Confidence 9999999 8899887652 7999999988 9999999999987543221
Q ss_pred -eeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 298 -LTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 298 -~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
.....||+.| .++|+||..+-.+|-+.++.+|.
T Consensus 492 ~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 492 FKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred hhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1356899888 56899999998888888877763
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.9e-15 Score=148.12 Aligned_cols=31 Identities=10% Similarity=-0.035 Sum_probs=24.2
Q ss_pred chhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 213 ASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 213 ~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
...++|.+|+++++ +|+|+++++|| |.....
T Consensus 321 ~g~~eF~~Eve~L~~i~HrNLV~L~gy----C~s~~~ 353 (487)
T 3oja_A 321 QGSETERLECERENQARQREIDALKEQ----YRTVID 353 (487)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHH----TCCCCC
T ss_pred ccHHHHHHHHHHHhcccccchhhHHHH----hcChHH
Confidence 34678999999998 99999999999 877654
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.4e-14 Score=141.27 Aligned_cols=93 Identities=27% Similarity=0.285 Sum_probs=81.6
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccC-CCcccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI-PYPLGV 79 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~-p~~~~~ 79 (408)
||. |+++++|+.|+|++|+|+ .+|..++.+++| .|+|++|+|++ +| .+++|++|+.|+|++|+|++.+ |..++.
T Consensus 456 lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~ 531 (567)
T 1dce_A 456 LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVS 531 (567)
T ss_dssp CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGG
T ss_pred CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhc
Confidence 676 888999999999999999 889999999999 89999999995 78 7889999999999999999877 888999
Q ss_pred cc-cceeEeeccccccCCCc
Q 037624 80 LP-LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~ 98 (408)
++ |+.|++++|++++..|.
T Consensus 532 l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 532 CPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCEEEecCCcCCCCccH
Confidence 98 99999999999877654
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.8e-14 Score=132.15 Aligned_cols=94 Identities=22% Similarity=0.168 Sum_probs=80.3
Q ss_pred CCCccccCCccCCeEeccC-CccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccc
Q 037624 1 TIPLEIGSLRNLVSLYLSG-NNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~-N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+||. |+.+++|+.|+|++ |+|++..|..|++|++| .|+|++|+|+|..|..|++|++|+.|||++|+|++..|..+.
T Consensus 23 ~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 101 (347)
T 2ifg_A 23 SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ 101 (347)
T ss_dssp TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC
T ss_pred ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcc
Confidence 4788 99999999999996 99997666789999999 899999999988888889999999999999999966555566
Q ss_pred ccccceeEeeccccccC
Q 037624 79 VLPLSYLDLSFNDLSGG 95 (408)
Q Consensus 79 ~~~l~~l~l~~n~l~g~ 95 (408)
.++|+.|++++|.+...
T Consensus 102 ~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 102 GLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCCCEEECCSSCCCCC
T ss_pred cCCceEEEeeCCCccCC
Confidence 66699999999998754
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-14 Score=147.24 Aligned_cols=76 Identities=18% Similarity=0.354 Sum_probs=45.0
Q ss_pred CChhhcccccc-EEEccccccccc-----------------cCcccc--CCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 26 IPSSLGRLTSC-TLTLSNNKLSGS-----------------IPSEIG--NLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 26 ~p~~~~~l~~L-~L~ls~N~l~g~-----------------iP~~~~--~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
||.+++++++| +|+|++|+|+|. +|..++ ++++|++|+|++|+++|.+|..++.++ |+.
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 55556666666 566666666654 666655 666666666666666666666666665 666
Q ss_pred eEeeccc-ccc-CCCcccc
Q 037624 85 LDLSFND-LSG-GIPKHLT 101 (408)
Q Consensus 85 l~l~~n~-l~g-~~p~~~~ 101 (408)
|++++|. ++| .+|..+.
T Consensus 278 L~Ls~n~~l~~~~lp~~~~ 296 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQ 296 (636)
T ss_dssp EECTTCTTSCHHHHHHHHH
T ss_pred EECcCCCCCccccchHHHH
Confidence 6666665 555 5554443
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-13 Score=121.16 Aligned_cols=89 Identities=26% Similarity=0.336 Sum_probs=44.1
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccccC-ccccCCCCCCEEEccCccccccCCCcccccc-cceeE
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIP-SEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP-~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~ 86 (408)
++|+.|+|++|++++..|..+..+++| .|+|++|+|+ .+| ..+..+++|++|+|++|+|++..|..+..++ |+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 455555555555554445455555555 5555555554 233 2344555555555555555544444444454 55555
Q ss_pred eeccccccCCCccc
Q 037624 87 LSFNDLSGGIPKHL 100 (408)
Q Consensus 87 l~~n~l~g~~p~~~ 100 (408)
+++|.++ .+|..+
T Consensus 119 Ls~N~l~-~lp~~~ 131 (229)
T 3e6j_A 119 MCCNKLT-ELPRGI 131 (229)
T ss_dssp CCSSCCC-SCCTTG
T ss_pred ccCCccc-ccCccc
Confidence 5555554 344433
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-14 Score=146.42 Aligned_cols=101 Identities=16% Similarity=0.265 Sum_probs=81.1
Q ss_pred CCccccCCccCCeEeccCCccccC-----------------CChhhc--ccccc-EEEccccccccccCccccCCCCCCE
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGS-----------------IPSSLG--RLTSC-TLTLSNNKLSGSIPSEIGNLQELSH 61 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~-----------------~p~~~~--~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~ 61 (408)
||++|+++++|++|+|++|+|+|. +|.+++ ++++| +|+|++|+++|.+|..++++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 677888888888888888888875 888888 88888 8888888888888888888888888
Q ss_pred EEccCcc-ccc-cCCCccccc------c-cceeEeeccccccCCCc--ccccc
Q 037624 62 LDSRHIF-IKG-TIPYPLGVL------P-LSYLDLSFNDLSGGIPK--HLTTK 103 (408)
Q Consensus 62 l~l~~N~-~~g-~~p~~~~~~------~-l~~l~l~~n~l~g~~p~--~~~~~ 103 (408)
|+|++|+ ++| .+|..++.+ + |+.|++++|.++ .+|. .+..+
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 8888887 888 788777775 6 888888888877 6776 55544
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=120.73 Aligned_cols=103 Identities=19% Similarity=0.170 Sum_probs=90.1
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||..+. ++|+.|+|++|++++..|..+..+++| .|+|++|++++..|..|.++++|++|+|++|+|++..+..+..
T Consensus 25 ~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~ 102 (220)
T 2v9t_B 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEG 102 (220)
T ss_dssp SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccC
Confidence 3677665 689999999999997666689999999 9999999999888999999999999999999999655566788
Q ss_pred cc-cceeEeeccccccCCCcccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
++ |+.|++++|.+++..|..+..+..
T Consensus 103 l~~L~~L~L~~N~l~~~~~~~~~~l~~ 129 (220)
T 2v9t_B 103 LFSLQLLLLNANKINCLRVDAFQDLHN 129 (220)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCCCCEEECCCCCCCEeCHHHcCCCCC
Confidence 99 999999999999988887765543
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.3e-14 Score=116.60 Aligned_cols=92 Identities=26% Similarity=0.243 Sum_probs=45.9
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCcccccc-CCCcccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGT-IPYPLGV 79 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~-~p~~~~~ 79 (408)
+|..++.+++|+.|+|++|.+++. ..++.+++| .|+|++|++++.+|..+..+++|++|+|++|.+++. .|..++.
T Consensus 34 ~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~ 111 (149)
T 2je0_A 34 LEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKK 111 (149)
T ss_dssp CCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGG
T ss_pred HHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhh
Confidence 344445555555555555555532 344555555 555555555544454444455555555555555542 2344455
Q ss_pred cc-cceeEeeccccccC
Q 037624 80 LP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~ 95 (408)
++ |+.|++++|.+++.
T Consensus 112 l~~L~~L~l~~N~l~~~ 128 (149)
T 2je0_A 112 LENLKSLDLFNCEVTNL 128 (149)
T ss_dssp CTTCCEEECTTCGGGGS
T ss_pred CCCCCEEeCcCCcccch
Confidence 55 55555555555443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.1e-14 Score=145.64 Aligned_cols=99 Identities=33% Similarity=0.501 Sum_probs=84.5
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
.||.+++++++|+.|+|++|.|+ .+|..|+.|++| .|+|++|+|+ .||..|++|++|++|+|++|.|+ .+|..++.
T Consensus 238 ~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~ 314 (727)
T 4b8c_D 238 NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGN 314 (727)
T ss_dssp CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTS
T ss_pred CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhc
Confidence 37788888888889999998888 888888888888 8999999888 88888888889999999999887 78888888
Q ss_pred cc-cceeEeeccccccCCCccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTT 102 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~ 102 (408)
++ |+.|+|++|.+++.+|..+..
T Consensus 315 l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 315 LCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp CTTCCCEECTTSCCCSHHHHHHHH
T ss_pred CCCccEEeCCCCccCCCChHHHhh
Confidence 88 889999988888887776543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-13 Score=120.15 Aligned_cols=103 Identities=25% Similarity=0.205 Sum_probs=88.1
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..|.++++|+.|+|++|+|++..+..+..+++| .|+|++|+|++..|..+..+++|+.|+|++|+|+ .+|..+..++
T Consensus 57 ~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 135 (229)
T 3e6j_A 57 PGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLT 135 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCT
T ss_pred HHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCC
Confidence 5668899999999999999984444557899999 9999999999655556789999999999999999 8999999999
Q ss_pred -cceeEeeccccccCCCccccccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTKLRR 106 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~~~~ 106 (408)
|+.|++++|++++..+..+..+...
T Consensus 136 ~L~~L~L~~N~l~~~~~~~~~~l~~L 161 (229)
T 3e6j_A 136 HLTHLALDQNQLKSIPHGAFDRLSSL 161 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCC
Confidence 9999999999997766666555443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=122.01 Aligned_cols=88 Identities=22% Similarity=0.123 Sum_probs=44.0
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEe
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDL 87 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l 87 (408)
++|+.|+|++|++++..|..++++++| .|+|++|++++..|..+.++++|++|+|++|++++..|..+..++ |+.|++
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 345555555555554444445555555 555555555544444445555555555555555544444444454 555555
Q ss_pred eccccccCCC
Q 037624 88 SFNDLSGGIP 97 (408)
Q Consensus 88 ~~n~l~g~~p 97 (408)
++|.+++..+
T Consensus 115 ~~N~l~~~~~ 124 (251)
T 3m19_A 115 GGNQLKSLPS 124 (251)
T ss_dssp CSSCCCCCCT
T ss_pred CCCcCCCcCh
Confidence 5555554333
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-13 Score=116.05 Aligned_cols=102 Identities=21% Similarity=0.169 Sum_probs=80.7
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|..+. ++|+.|+|++|++++..|..++.+++| +|+|++|++++..|..++++++|++|+|++|++++..|..+..+
T Consensus 22 ~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 99 (177)
T 2o6r_A 22 VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKL 99 (177)
T ss_dssp CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCC
Confidence 555443 689999999999996555567889999 89999999995555567889999999999999997777778888
Q ss_pred c-cceeEeeccccccCCCcccccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
+ |+.|++++|.+++..+..+..+..
T Consensus 100 ~~L~~L~l~~N~l~~~~~~~~~~l~~ 125 (177)
T 2o6r_A 100 TQLKELALDTNQLKSVPDGIFDRLTS 125 (177)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred cccCEEECcCCcceEeCHHHhcCCcc
Confidence 8 999999999998655544454433
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.5e-13 Score=121.28 Aligned_cols=101 Identities=24% Similarity=0.159 Sum_probs=75.3
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..|+++++|++|+|++|++++..|..+..+++| +|+|++|++++..|..+..+++|++|+|++|++++..|..+..++
T Consensus 52 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 131 (251)
T 3m19_A 52 DATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLT 131 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCC
Confidence 3457788888888888888887666677888888 788888888855555677788888888888888866666667777
Q ss_pred -cceeEeeccccccCCCcccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
|+.|++++|.+++..|..+..+
T Consensus 132 ~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 132 KLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTC
T ss_pred cccEEECcCCcCCccCHHHcCcC
Confidence 8888888888776665555444
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-14 Score=149.27 Aligned_cols=76 Identities=24% Similarity=0.314 Sum_probs=45.3
Q ss_pred CChhhcccccc-EEEcccccccc-----------------ccCcccc--CCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 26 IPSSLGRLTSC-TLTLSNNKLSG-----------------SIPSEIG--NLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 26 ~p~~~~~l~~L-~L~ls~N~l~g-----------------~iP~~~~--~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
||..++++++| .|+|++|+|+| .+|+.++ ++++|++|+|++|++.|.+|..++.++ |+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 55556666666 56666666665 2666655 666666666666666666666666666 666
Q ss_pred eEeeccc-ccc-CCCcccc
Q 037624 85 LDLSFND-LSG-GIPKHLT 101 (408)
Q Consensus 85 l~l~~n~-l~g-~~p~~~~ 101 (408)
|++++|+ ++| .+|..+.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~ 538 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWT 538 (876)
T ss_dssp EECTTCTTSCHHHHHHHHH
T ss_pred EECcCCCCcccccchHHHH
Confidence 6666665 555 5554443
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.4e-13 Score=113.33 Aligned_cols=96 Identities=24% Similarity=0.226 Sum_probs=81.4
Q ss_pred CCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+|++ ++++++|++|+|++|++++..|..++.+++| .|+|++|++++..|..+.++++|++|+|++|++++..+..+..
T Consensus 43 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 122 (177)
T 2o6r_A 43 LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDR 122 (177)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcC
Confidence 4444 6889999999999999995555567899999 9999999999666666889999999999999999666666788
Q ss_pred cc-cceeEeeccccccCCC
Q 037624 80 LP-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p 97 (408)
++ |+.|++++|++++..|
T Consensus 123 l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 123 LTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTCCEEECCSSCBCCCHH
T ss_pred CcccCEEEecCCCeeccCc
Confidence 88 9999999999987655
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.5e-13 Score=115.50 Aligned_cols=87 Identities=24% Similarity=0.162 Sum_probs=41.4
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
+|++|+|++|++++..+..++.+++| .|+|++|++++..|..+.++++|++|+|++|++++..|..+..++ |+.|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555553333334455555 555555555522222344455555555555555543333444444 5555555
Q ss_pred ccccccCCC
Q 037624 89 FNDLSGGIP 97 (408)
Q Consensus 89 ~n~l~g~~p 97 (408)
+|.+++..+
T Consensus 109 ~N~l~~~~~ 117 (208)
T 2o6s_A 109 TNQLQSLPD 117 (208)
T ss_dssp SSCCCCCCT
T ss_pred CCcCcccCH
Confidence 555554333
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.40 E-value=7.3e-13 Score=120.71 Aligned_cols=98 Identities=27% Similarity=0.300 Sum_probs=60.7
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.++++++|++|+|++|++++..|..++.+++| +|+|++|++++..|..++++++|++|+|++|++++..|..++.++ |
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC
Confidence 45666666666666666665444455666666 666666666654444566666666666666666655555556666 6
Q ss_pred ceeEeeccccccCCCccccc
Q 037624 83 SYLDLSFNDLSGGIPKHLTT 102 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~~~~ 102 (408)
+.|++++|.+++..|..+..
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~ 179 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDK 179 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTT
T ss_pred CEEECCCCCcCccCHHHhcC
Confidence 66666666666555544433
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-13 Score=114.36 Aligned_cols=86 Identities=26% Similarity=0.244 Sum_probs=63.5
Q ss_pred CCccCCeEeccCCccc-cCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 8 SLRNLVSLYLSGNNLT-GSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~-g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
..++|+.|+|++|+++ |.+|..+..+++| .|+|++|++++. ..++.+++|++|+|++|++++.+|..+..++ |+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3467777777777777 7777777777777 777777777743 5677777777777777777776777666677 777
Q ss_pred eEeeccccccC
Q 037624 85 LDLSFNDLSGG 95 (408)
Q Consensus 85 l~l~~n~l~g~ 95 (408)
|++++|.+++.
T Consensus 100 L~Ls~N~l~~~ 110 (168)
T 2ell_A 100 LNLSGNKLKDI 110 (168)
T ss_dssp EECBSSSCCSS
T ss_pred EeccCCccCcc
Confidence 77777777753
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.38 E-value=9.6e-14 Score=145.38 Aligned_cols=102 Identities=22% Similarity=0.285 Sum_probs=84.0
Q ss_pred CCccccCCccCCeEeccCCcccc-----------------CCChhhc--ccccc-EEEccccccccccCccccCCCCCCE
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTG-----------------SIPSSLG--RLTSC-TLTLSNNKLSGSIPSEIGNLQELSH 61 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g-----------------~~p~~~~--~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~ 61 (408)
||++|++|++|+.|+|++|+|+| .+|..++ ++++| .|+|++|+++|.+|..+++|++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78888888899999999998887 4888877 88888 8999988888888888888888999
Q ss_pred EEccCcc-ccc-cCCCccccc-------c-cceeEeeccccccCCCc--cccccc
Q 037624 62 LDSRHIF-IKG-TIPYPLGVL-------P-LSYLDLSFNDLSGGIPK--HLTTKL 104 (408)
Q Consensus 62 l~l~~N~-~~g-~~p~~~~~~-------~-l~~l~l~~n~l~g~~p~--~~~~~~ 104 (408)
|+|++|+ ++| .+|..++.+ + |+.|++++|.++ .+|. .+..+.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 9999887 888 788765544 4 888888888888 7777 555543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-12 Score=119.23 Aligned_cols=99 Identities=27% Similarity=0.255 Sum_probs=80.7
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
++++.+++|++|+|++|.+++ + +.++.+++| +|+|++|++++..|..++++++|++|+|++|++++..|..++.++
T Consensus 57 ~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 134 (272)
T 3rfs_A 57 QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTN 134 (272)
T ss_dssp TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCC
Confidence 357788899999999999885 4 478888899 899999999866666678899999999999999877777788888
Q ss_pred cceeEeeccccccCCCccccccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
|+.|++++|.+++..|..+..+.
T Consensus 135 L~~L~L~~n~l~~~~~~~~~~l~ 157 (272)
T 3rfs_A 135 LTYLNLAHNQLQSLPKGVFDKLT 157 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEEECCCCccCccCHHHhccCc
Confidence 99999999998877666555443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-12 Score=114.37 Aligned_cols=104 Identities=25% Similarity=0.246 Sum_probs=86.4
Q ss_pred CCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+|++ ++++++|++|+|++|++++..+..+..+++| +|+|++|++++..|..+.++++|++|+|++|++++..|..+..
T Consensus 43 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 122 (208)
T 2o6s_A 43 LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDK 122 (208)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhcc
Confidence 4444 6899999999999999995555567899999 9999999999555556789999999999999999777777889
Q ss_pred cc-cceeEeeccccccCCCcccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
++ |+.|++++|.+++..+..+..+..
T Consensus 123 l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 123 LTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred CCcCCEEECCCCccceeCHHHhccCCC
Confidence 99 999999999999766655555443
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.7e-13 Score=128.78 Aligned_cols=104 Identities=23% Similarity=0.161 Sum_probs=80.8
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|..++++++|+.|+|++|++++..|..++.+++| .|+|++|++++..|..++++++|++|+|++|++++..|..+..+
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 35567788888888888888887777788888888 88888888886667778888888888888888887778888888
Q ss_pred c-cceeEeeccccccCCCcccccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
+ |+.|++++|++++..+..+..+..
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~ 396 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTS 396 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred ccccEEECCCCccccCCHhHhccCCc
Confidence 8 888888888888655544444433
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-12 Score=119.51 Aligned_cols=92 Identities=27% Similarity=0.169 Sum_probs=42.0
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|..+..+++|++|+|++|++++..|..|..+++| .|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+
T Consensus 92 l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 171 (290)
T 1p9a_G 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL 171 (290)
T ss_dssp CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTC
T ss_pred CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCc
Confidence 34444444455555555555543333344444455 45555555543322333444455555555555543333333444
Q ss_pred c-cceeEeeccccc
Q 037624 81 P-LSYLDLSFNDLS 93 (408)
Q Consensus 81 ~-l~~l~l~~n~l~ 93 (408)
+ |+.|++++|+++
T Consensus 172 ~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 172 ENLDTLLLQENSLY 185 (290)
T ss_dssp TTCCEEECCSSCCC
T ss_pred CCCCEEECCCCcCC
Confidence 4 555555555544
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=9.3e-13 Score=134.06 Aligned_cols=101 Identities=24% Similarity=0.294 Sum_probs=81.0
Q ss_pred CccccCCccCCeEeccCCccc-cCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLT-GSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~-g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
|..+..+++|+.|+|++|++. +.+|..+..+++| .|||++|+|++..|..|+++++|++|+|++|+|++..|..+..+
T Consensus 462 ~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 541 (635)
T 4g8a_A 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 541 (635)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC
T ss_pred ccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC
Confidence 445677788888888888744 4567778888888 88888888887778888888888888888888888777788888
Q ss_pred c-cceeEeeccccccCCCcccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+ |+.|++++|++++..|..+..+
T Consensus 542 ~~L~~L~Ls~N~l~~~~~~~l~~l 565 (635)
T 4g8a_A 542 NSLQVLDYSLNHIMTSKKQELQHF 565 (635)
T ss_dssp TTCCEEECTTSCCCBCCSSCTTCC
T ss_pred CCCCEEECCCCcCCCCCHHHHHhh
Confidence 8 8888888888888888776554
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=121.17 Aligned_cols=97 Identities=23% Similarity=0.271 Sum_probs=66.5
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEcccccccc-ccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSG-SIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g-~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
.+.++++|++|+|++|.+++..|..+..+++| .|+|++|++++ .+|..+..+++|++|+|++|.+++..|..+..++
T Consensus 121 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 200 (306)
T 2z66_A 121 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 200 (306)
T ss_dssp TTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCC
Confidence 46667777777777777776666667777777 67777777765 4666677777777777777777766666666666
Q ss_pred cceeEeeccccccCCCcccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLT 101 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~ 101 (408)
|+.|++++|.+++..+..+.
T Consensus 201 L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 201 LQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp CCEEECTTSCCSBCCSGGGT
T ss_pred CCEEECCCCccCccChhhcc
Confidence 77777777776655444443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=135.57 Aligned_cols=101 Identities=24% Similarity=0.246 Sum_probs=89.6
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..+..+++|+.|+|++|.++ .+|..++.+++| .|+|++|+|+ .||..|++|++|++|+|++|.|+ .+|..++.++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 556889999999999999999 999999999999 9999999999 99999999999999999999999 8999999999
Q ss_pred -cceeEeeccccccCCCcccccccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
|+.|+|++|.++ .+|..+..+...+
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~ 319 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQ 319 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCC
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCcc
Confidence 999999999997 7888777665443
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-12 Score=127.34 Aligned_cols=96 Identities=22% Similarity=0.132 Sum_probs=89.4
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..|+++++|+.|+|++|.+++..|..++.+++| .|+|++|++++..|..+.++++|++|+|++|++++..+..+..++
T Consensus 316 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 395 (455)
T 3v47_A 316 DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLT 395 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred hhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCC
Confidence 5678999999999999999998888899999999 999999999988899999999999999999999977667788999
Q ss_pred -cceeEeeccccccCCCc
Q 037624 82 -LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~ 98 (408)
|+.|++++|++++..|.
T Consensus 396 ~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 396 SLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TCCEEECCSSCBCCCTTT
T ss_pred cccEEEccCCCcccCCCc
Confidence 99999999999998884
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=118.12 Aligned_cols=101 Identities=23% Similarity=0.128 Sum_probs=77.3
Q ss_pred CccccCCccCCeEeccCCc-cccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNN-LTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~-l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
|..++++++|++|+|++|. +++..|..+..+++| +|+|++|++++..|..+.++++|++|+|++|.+++..+..++.+
T Consensus 73 ~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 5567788888888888887 664447778888888 88888888887667778888888888888888886666667778
Q ss_pred c-cceeEeeccccccCCCcccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+ |+.|++++|.+++..+..+..+
T Consensus 153 ~~L~~L~l~~n~l~~~~~~~~~~l 176 (285)
T 1ozn_A 153 GNLTHLFLHGNRISSVPERAFRGL 176 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCccEEECCCCcccccCHHHhcCc
Confidence 7 8888888888876555545444
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=118.98 Aligned_cols=119 Identities=12% Similarity=0.013 Sum_probs=88.2
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCc---------------chhhHHHHHHHHhcccCC
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEP---------------ASTRSFQNEVDILYPKYD 230 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~---------------~~~~~~~~E~~~l~~~~n 230 (408)
.+......|...+.||+|+||.||+|...+|+.||||.++....... .....|.+|++++.+-.|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 34444455667799999999999999997799999999964321110 134578999999972225
Q ss_pred cceeeeEeEeeecCCccchhhhhhcccchhhhhhh--------------------------ccCccccccccCCceEEee
Q 037624 231 IETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM--------------------------IMKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 231 ~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l--------------------------~~k~~~~~l~~~~~~ki~D 284 (408)
+++.++++ .+..++++||+ ++++|.+.. ++||.|++++ ++++||+|
T Consensus 164 -~~v~~~~~-----~~~~~lvmE~~-~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 164 -LAVPKVYA-----WEGNAVLMELI-DAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp -SSSCCEEE-----EETTEEEEECC-CCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred -CCcCeEEe-----ccceEEEEEec-CCCcHHHcchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 77777632 24568999999 888887621 1799999999 99999999
Q ss_pred cccccccC
Q 037624 285 FGMTMHLY 292 (408)
Q Consensus 285 fGla~~~~ 292 (408)
||+|+...
T Consensus 236 FG~a~~~~ 243 (282)
T 1zar_A 236 FPQSVEVG 243 (282)
T ss_dssp CTTCEETT
T ss_pred CCCCeECC
Confidence 99998654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-12 Score=112.74 Aligned_cols=93 Identities=20% Similarity=0.285 Sum_probs=65.5
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+| ++..+++|++|+|++|.++ .+..+..+++| +|+|++|++++..|..++.+++|++|+|++|++++..|..++.+
T Consensus 59 l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l 135 (197)
T 4ezg_A 59 LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTL 135 (197)
T ss_dssp CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTC
T ss_pred hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhC
Confidence 45 5677777777777777554 33467777777 77777777776677777777777777777777777677777777
Q ss_pred c-cceeEeeccccccCCC
Q 037624 81 P-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p 97 (408)
+ |+.|++++|.+.+.+|
T Consensus 136 ~~L~~L~L~~n~~i~~~~ 153 (197)
T 4ezg_A 136 PKVNSIDLSYNGAITDIM 153 (197)
T ss_dssp SSCCEEECCSCTBCCCCG
T ss_pred CCCCEEEccCCCCccccH
Confidence 7 7777777776333444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-12 Score=108.21 Aligned_cols=94 Identities=21% Similarity=0.216 Sum_probs=82.0
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
+.+.|++++|+|+ .+|..+. +.| .|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..++ |+.|+++
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4689999999999 7998774 788 999999999988788999999999999999999977777788999 9999999
Q ss_pred ccccccCCCcccccccccc
Q 037624 89 FNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 89 ~n~l~g~~p~~~~~~~~~~ 107 (408)
+|++++..+..+..+...+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~ 105 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLT 105 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCC
T ss_pred CCccCEeCHHHhcCCCCCC
Confidence 9999987776676655443
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-12 Score=118.21 Aligned_cols=103 Identities=23% Similarity=0.173 Sum_probs=82.5
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..+..+++|++|+|++|++++..|..+..+++| .|+|++|++++..|..++++++|+.|+|++|++++..+..+..++
T Consensus 98 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 177 (285)
T 1ozn_A 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 177 (285)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCcc
Confidence 5567888888888888888887777788888888 888888888855555688888888888888888866666788888
Q ss_pred -cceeEeeccccccCCCcccccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
|+.|++++|.+++..|..+..+..
T Consensus 178 ~L~~L~l~~n~l~~~~~~~~~~l~~ 202 (285)
T 1ozn_A 178 SLDRLLLHQNRVAHVHPHAFRDLGR 202 (285)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTT
T ss_pred ccCEEECCCCcccccCHhHccCccc
Confidence 888888888888877777665543
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-12 Score=131.47 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=60.9
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+|.++++|++|||++|+|++..|.+|.+|++| +|+|++|+|++..|..|.+|++|++|+|++|++++..|..++.++ |
T Consensus 71 ~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L 150 (635)
T 4g8a_A 71 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 150 (635)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCccc
Confidence 46666666666776666664444556666666 677777666633334566666677777777766655555566666 7
Q ss_pred ceeEeecccccc-CCCccccc
Q 037624 83 SYLDLSFNDLSG-GIPKHLTT 102 (408)
Q Consensus 83 ~~l~l~~n~l~g-~~p~~~~~ 102 (408)
+.|++++|.+++ ..|..+..
T Consensus 151 ~~L~Ls~N~l~~~~~~~~~~~ 171 (635)
T 4g8a_A 151 KELNVAHNLIQSFKLPEYFSN 171 (635)
T ss_dssp CEEECCSSCCCCCCCCGGGGG
T ss_pred CeeccccCccccCCCchhhcc
Confidence 777777766654 34444433
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.32 E-value=8.8e-13 Score=108.65 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=83.4
Q ss_pred CCccCCeEeccCCccc-cCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 8 SLRNLVSLYLSGNNLT-GSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~-g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
..++|+.|+|++|.++ |.+|..++.+++| .|+|++|++++. ..++++++|++|+|++|.+++.+|..+..++ |+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999999 8999999999999 999999999955 7899999999999999999988999888899 999
Q ss_pred eEeeccccccC-CCccccccc
Q 037624 85 LDLSFNDLSGG-IPKHLTTKL 104 (408)
Q Consensus 85 l~l~~n~l~g~-~p~~~~~~~ 104 (408)
|++++|.+++. .|..+..+.
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~ 113 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLE 113 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCT
T ss_pred EECCCCcCCChHHHHHHhhCC
Confidence 99999999873 334454443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.6e-12 Score=114.67 Aligned_cols=102 Identities=26% Similarity=0.362 Sum_probs=81.5
Q ss_pred CCc-cccCCccCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccc
Q 037624 2 IPL-EIGSLRNLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 2 ip~-~~~~l~~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+|+ .|+++++|++|+|++|+++ .+|. .+..+++| +|+|++|++++..|..+.++++|++|+|++|++++..|..++
T Consensus 52 ~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 130 (270)
T 2o6q_A 52 LPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFD 130 (270)
T ss_dssp CCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTT
T ss_pred eCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhC
Confidence 444 6888999999999999998 5554 45789999 899999999855555678899999999999999987777888
Q ss_pred ccc-cceeEeeccccccCCCccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
.++ |+.|++++|.+++..+..+..+.
T Consensus 131 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 131 SLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cCcCCCEEECCCCcCCccCHhHccCCc
Confidence 888 99999999998876655555443
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.6e-12 Score=107.27 Aligned_cols=93 Identities=20% Similarity=0.155 Sum_probs=80.1
Q ss_pred CCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEeec
Q 037624 12 LVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSF 89 (408)
Q Consensus 12 l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~ 89 (408)
-+.+++++|+++ .+|..+. +.| .|+|++|+|++..|..|+++++|++|+|++|+|++..|..+..++ |+.|++++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999997 8998775 789 999999999988888999999999999999999976666678999 99999999
Q ss_pred cccccCCCcccccccccc
Q 037624 90 NDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 90 n~l~g~~p~~~~~~~~~~ 107 (408)
|++++..+..+..+...+
T Consensus 91 N~l~~l~~~~~~~l~~L~ 108 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLT 108 (174)
T ss_dssp SCCCCCCTTTTTTCTTCS
T ss_pred CccceeCHHHhccccCCC
Confidence 999976665566554433
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-12 Score=117.70 Aligned_cols=104 Identities=20% Similarity=0.172 Sum_probs=90.9
Q ss_pred CCccccCCccCCeEeccCCccccCCC-hhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccc-cCCCccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG-TIPYPLG 78 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p-~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g-~~p~~~~ 78 (408)
+|..+..+++|++|+|++|++++..+ ..+..+++| .|+|++|++++..|..+.++++|++|+|++|.+++ .+|..+.
T Consensus 93 l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 172 (306)
T 2z66_A 93 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 172 (306)
T ss_dssp EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHh
Confidence 57778899999999999999995444 578899999 99999999998888889999999999999999987 6889999
Q ss_pred ccc-cceeEeeccccccCCCcccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
.++ |+.|++++|.+++..|..+..+..
T Consensus 173 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 200 (306)
T 2z66_A 173 ELRNLTFLDLSQCQLEQLSPTAFNSLSS 200 (306)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hCcCCCEEECCCCCcCCcCHHHhcCCCC
Confidence 999 999999999999887877765543
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-12 Score=108.64 Aligned_cols=94 Identities=28% Similarity=0.240 Sum_probs=83.6
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccC-CCcccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI-PYPLGV 79 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~-p~~~~~ 79 (408)
||..+..+++|+.|+|++|.+++. ..++.+++| .|+|++|++++.+|..+.++++|++|+|++|.+++.. +..+..
T Consensus 41 i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~ 118 (168)
T 2ell_A 41 IEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKK 118 (168)
T ss_dssp CSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSS
T ss_pred HHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhc
Confidence 688889999999999999999954 789999999 9999999999878988888999999999999998642 278889
Q ss_pred cc-cceeEeeccccccCCC
Q 037624 80 LP-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p 97 (408)
++ |+.|++++|.+++..+
T Consensus 119 l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 119 LECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CSCCCEEECCSSGGGTSTT
T ss_pred CCCCCEEEeeCCcCcchHH
Confidence 99 9999999999997655
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.2e-12 Score=110.53 Aligned_cols=94 Identities=20% Similarity=0.225 Sum_probs=69.5
Q ss_pred cCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
+.+++|+.|+|++|.++ .+| .+..+++| .|+|++|.++ .+ +.+..+++|++|+|++|.+++..|..++.++ |+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45677888888888887 677 67778888 7888888665 33 4677788888888888888777777777777 888
Q ss_pred eEeeccccccCCCccccccc
Q 037624 85 LDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 85 l~l~~n~l~g~~p~~~~~~~ 104 (408)
|++++|.+++..|..+..+.
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~ 136 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLP 136 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCS
T ss_pred EEecCCccCcHhHHHHhhCC
Confidence 88888887776666555443
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.1e-12 Score=115.24 Aligned_cols=98 Identities=20% Similarity=0.025 Sum_probs=55.8
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||..+. ++|++|+|++|++++..|..+.++++| .|+|++|++++..|..+.++++|++|+|++|.+++..|..+..+
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 444432 356666666666664444456666666 66666666664444455666666666666666665555556666
Q ss_pred c-cceeEeeccccccCCCcccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLT 101 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~ 101 (408)
+ |+.|++++|.+++..+..+.
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~ 121 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIG 121 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCT
T ss_pred ccccEEECCCCCccccCchhcc
Confidence 5 66666666666554443333
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=4e-12 Score=129.06 Aligned_cols=101 Identities=19% Similarity=0.253 Sum_probs=74.4
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
..|+++++|++|+|++|++++..|..|+++++| +|+|++|++++..|..|+++++|++|+|++|.+++..|..++.++
T Consensus 50 ~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 129 (606)
T 3vq2_A 50 YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLIT 129 (606)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTT
T ss_pred hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCC
Confidence 357777777778887777776667777777777 778877777766677777777777777777777766667777777
Q ss_pred cceeEeecccccc-CCCccccccc
Q 037624 82 LSYLDLSFNDLSG-GIPKHLTTKL 104 (408)
Q Consensus 82 l~~l~l~~n~l~g-~~p~~~~~~~ 104 (408)
|++|++++|.+++ .+|..+..+.
T Consensus 130 L~~L~L~~n~l~~~~lp~~~~~l~ 153 (606)
T 3vq2_A 130 LKKLNVAHNFIHSCKLPAYFSNLT 153 (606)
T ss_dssp CCEEECCSSCCCCCCCCGGGGTCT
T ss_pred CCEEeCCCCcccceechHhHhhcC
Confidence 7777777777765 5566665543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-12 Score=116.86 Aligned_cols=97 Identities=30% Similarity=0.236 Sum_probs=65.7
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..|.++++|+.|+|++|++++ +|.. +.+++| .|+|++|+++ .+|..+..+++|++|+|++|++++..|..+..++
T Consensus 48 ~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~ 124 (290)
T 1p9a_G 48 LATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124 (290)
T ss_dssp GGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT
T ss_pred HHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCC
Confidence 3457777777777777777773 4433 566777 7777777776 6777777777777777777777765556677777
Q ss_pred -cceeEeeccccccCCCccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTT 102 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~ 102 (408)
|+.|++++|++++..+..+..
T Consensus 125 ~L~~L~L~~N~l~~~~~~~~~~ 146 (290)
T 1p9a_G 125 ELQELYLKGNELKTLPPGLLTP 146 (290)
T ss_dssp TCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCEEECCCCCCCccChhhccc
Confidence 777777777777555544443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.30 E-value=7.4e-12 Score=113.84 Aligned_cols=102 Identities=22% Similarity=0.220 Sum_probs=78.4
Q ss_pred CCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+|++ +.++++|++|+|++|++++..|..+..+++| .|+|++|++++..|..++++++|++|+|++|.+++..+..+..
T Consensus 76 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 76 LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccC
Confidence 4555 4678888888888888885555567888888 8888888888666667788888888888888888666666778
Q ss_pred cc-cceeEeeccccccCCCcccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
++ |+.|++++|.+++..+..+..+
T Consensus 156 l~~L~~L~L~~n~l~~~~~~~~~~l 180 (270)
T 2o6q_A 156 LTSLKELRLYNNQLKRVPEGAFDKL 180 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CcccceeEecCCcCcEeChhHhccC
Confidence 88 8888888888887666555544
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.9e-12 Score=120.10 Aligned_cols=87 Identities=29% Similarity=0.168 Sum_probs=51.5
Q ss_pred CCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-ccee
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYL 85 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l 85 (408)
++++|+.|+|++|+|++..|..|..+++| .|+|++|+|++..|..|.++++|+.|+|++|++++..|..+..++ |+.|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 55666666666666664444456666666 566666666644444555666666666666666655555666666 6666
Q ss_pred Eeecccccc
Q 037624 86 DLSFNDLSG 94 (408)
Q Consensus 86 ~l~~n~l~g 94 (408)
+|++|.+++
T Consensus 142 ~L~~N~l~~ 150 (361)
T 2xot_A 142 YLSQNQISR 150 (361)
T ss_dssp ECCSSCCCS
T ss_pred ECCCCcCCe
Confidence 666666654
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.1e-12 Score=115.83 Aligned_cols=103 Identities=19% Similarity=0.232 Sum_probs=90.1
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
..++++++|++|+|++|++++..|..+..+++| +|+|++|++++..|..+.++++|++|++++|.+++..+..++.++
T Consensus 46 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 125 (276)
T 2z62_A 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125 (276)
T ss_dssp TTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTT
T ss_pred hHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCC
Confidence 368899999999999999997667789999999 999999999977778899999999999999999987777899999
Q ss_pred cceeEeecccccc-CCCccccccccc
Q 037624 82 LSYLDLSFNDLSG-GIPKHLTTKLRR 106 (408)
Q Consensus 82 l~~l~l~~n~l~g-~~p~~~~~~~~~ 106 (408)
|+.|++++|.+++ .+|..+..+...
T Consensus 126 L~~L~l~~n~l~~~~l~~~~~~l~~L 151 (276)
T 2z62_A 126 LKELNVAHNLIQSFKLPEYFSNLTNL 151 (276)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTC
T ss_pred CCEEECcCCccceecCchhhccCCCC
Confidence 9999999999987 468777665443
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-12 Score=121.53 Aligned_cols=87 Identities=26% Similarity=0.251 Sum_probs=69.6
Q ss_pred CCccCCeEeccCCccccCCChhh--cccccc-EEEccccccccccCccccCC-----CCCCEEEccCccccccCCCcccc
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSL--GRLTSC-TLTLSNNKLSGSIPSEIGNL-----QELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~--~~l~~L-~L~ls~N~l~g~iP~~~~~l-----~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
++++|++|+|++|+++|.+|..+ +.+++| .|+|++|++++. |..++.+ ++|++|+|++|++++..|..++.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 67888888888888888888776 778888 888888888865 7777776 78888888888888777778888
Q ss_pred cc-cceeEeeccccccC
Q 037624 80 LP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~ 95 (408)
++ |+.|++++|.+.+.
T Consensus 172 l~~L~~L~Ls~N~l~~~ 188 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGE 188 (312)
T ss_dssp CSSCCEEECCSCTTCHH
T ss_pred CCCCCEEECCCCCcCcc
Confidence 88 88888888887654
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.6e-12 Score=128.62 Aligned_cols=101 Identities=30% Similarity=0.355 Sum_probs=91.1
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccc-cCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG-TIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g-~~p~~~~~~ 80 (408)
|..|+++++|++|+|++|.+++..|..|+++++| +|+|++|++++..|..++++++|++|+|++|.+++ .+|..++.+
T Consensus 73 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l 152 (606)
T 3vq2_A 73 DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNL 152 (606)
T ss_dssp TTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTC
T ss_pred HHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhc
Confidence 5678999999999999999998789999999999 99999999996666889999999999999999986 689999999
Q ss_pred c-cceeEeeccccccCCCcccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+ |+.|++++|.+++..|..+..+
T Consensus 153 ~~L~~L~Ls~n~l~~~~~~~~~~l 176 (606)
T 3vq2_A 153 TNLVHVDLSYNYIQTITVNDLQFL 176 (606)
T ss_dssp TTCCEEECCSSCCCEECTTTTHHH
T ss_pred CCCCEEEccCCcceecChhhhhhh
Confidence 9 9999999999998877766544
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4e-12 Score=127.41 Aligned_cols=84 Identities=25% Similarity=0.211 Sum_probs=40.8
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEe
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDL 87 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l 87 (408)
++|++|+|++|++++..|.+++++++| +|+|++|++++..|..|+++++|++|+|++|.+++..|..++.++ |++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 345555555555544444444455555 455555555444444444555555555555555444444444444 555555
Q ss_pred eccccc
Q 037624 88 SFNDLS 93 (408)
Q Consensus 88 ~~n~l~ 93 (408)
++|.++
T Consensus 106 s~n~l~ 111 (549)
T 2z81_A 106 MGNPYQ 111 (549)
T ss_dssp TTCCCS
T ss_pred CCCccc
Confidence 555444
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=6.5e-12 Score=119.25 Aligned_cols=103 Identities=22% Similarity=0.138 Sum_probs=88.9
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhc-ccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLG-RLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~-~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+||..+. ..++.|+|++|+|++..+..+. .+++| .|+|++|+|++..|..|.++++|++|+|++|+|++..|..+.
T Consensus 32 ~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 109 (361)
T 2xot_A 32 NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS 109 (361)
T ss_dssp SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhC
Confidence 3676654 4689999999999976666676 89999 999999999976667899999999999999999988888899
Q ss_pred ccc-cceeEeeccccccCCCcccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
.++ |+.|+|++|.+++..|..+..+..
T Consensus 110 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 137 (361)
T 2xot_A 110 DLQALEVLLLYNNHIVVVDRNAFEDMAQ 137 (361)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCcCCCEEECCCCcccEECHHHhCCccc
Confidence 999 999999999999887877766543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=6.3e-12 Score=126.22 Aligned_cols=91 Identities=26% Similarity=0.316 Sum_probs=83.4
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
.|+.|+|++|+|++ +|. ++.+++| .|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .++.++ |+.|+++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999995 886 9999999 9999999999 999999999999999999999997 77 899999 9999999
Q ss_pred ccccccCC-Cccccccccc
Q 037624 89 FNDLSGGI-PKHLTTKLRR 106 (408)
Q Consensus 89 ~n~l~g~~-p~~~~~~~~~ 106 (408)
+|++++.. |..+..+...
T Consensus 517 ~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTC
T ss_pred CCCCCCCCCcHHHhcCCCC
Confidence 99999887 8887766543
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.9e-12 Score=127.34 Aligned_cols=104 Identities=21% Similarity=0.249 Sum_probs=92.6
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccc-cccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLS-GSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~-g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
..+.++++|++|+|++|.+++.+|..+..+++| .|+|++|+++ +.+|..+..+++|++|+|++|++++..|..+..++
T Consensus 415 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 494 (570)
T 2z63_A 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494 (570)
T ss_dssp CTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhccc
Confidence 357889999999999999998899999999999 9999999998 78999999999999999999999998899999999
Q ss_pred -cceeEeeccccccCCCcccccccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
|+.|++++|.+++..|..+..+...+
T Consensus 495 ~L~~L~l~~n~l~~~~~~~~~~l~~L~ 521 (570)
T 2z63_A 495 SLQVLNMASNQLKSVPDGIFDRLTSLQ 521 (570)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred CCCEEeCCCCcCCCCCHHHhhcccCCc
Confidence 99999999999988777776554443
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.7e-12 Score=128.42 Aligned_cols=102 Identities=17% Similarity=0.116 Sum_probs=74.8
Q ss_pred CCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
||+. ++++++|+.|+|++|.+++..|..|+.+++| .|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.
T Consensus 66 lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 145 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHN 145 (597)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhcc
Confidence 3444 4667788888888888886666677888888 7888888888666666778888888888888887544445677
Q ss_pred cc-cceeEeeccccccCCCcccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
++ |+.|++++|.+++..|..+..+
T Consensus 146 l~~L~~L~Ls~N~l~~~~~~~~~~l 170 (597)
T 3oja_B 146 TPKLTTLSMSNNNLERIEDDTFQAT 170 (597)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTC
T ss_pred CCCCCEEEeeCCcCCCCChhhhhcC
Confidence 77 8888888888877777666554
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.9e-12 Score=125.42 Aligned_cols=102 Identities=26% Similarity=0.245 Sum_probs=81.9
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
.||.++. ++|+.|+|++|++++..|..+.++++| +|+|++|++++..|..|+++++|++|||++|+++ .+|.. .
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 88 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--P 88 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--C
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--c
Confidence 3677766 788888999888887666788888888 8888888888777888888888888888888888 57766 6
Q ss_pred cc-cceeEeecccccc-CCCcccccccccc
Q 037624 80 LP-LSYLDLSFNDLSG-GIPKHLTTKLRRK 107 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g-~~p~~~~~~~~~~ 107 (408)
++ |++|++++|.+++ .+|..+..+...+
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred cCCccEEeccCCccccccchhhhccCCcce
Confidence 77 8888888888887 5777776665443
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=9.4e-12 Score=122.61 Aligned_cols=100 Identities=25% Similarity=0.201 Sum_probs=60.5
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
..|.++++|++|+|++|.+++..|..|+++++| +|+|++|++++..+..+.++++|++|+|++|.+++..|..+..++
T Consensus 50 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 129 (477)
T 2id5_A 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYN 129 (477)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHcccccc
Confidence 345666666666666666665556666666666 666666666632223455666666666666666666666666666
Q ss_pred cceeEeeccccccCCCcccccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
|+.|++++|.+++..|..+..+
T Consensus 130 L~~L~l~~n~l~~~~~~~~~~l 151 (477)
T 2id5_A 130 LKSLEVGDNDLVYISHRAFSGL 151 (477)
T ss_dssp CCEEEECCTTCCEECTTSSTTC
T ss_pred CCEEECCCCccceeChhhccCC
Confidence 6666666666665555554443
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=121.43 Aligned_cols=100 Identities=19% Similarity=0.134 Sum_probs=84.1
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||.++. ++|+.|+|++|++++..|..|.++++| .|+|++|++++..|..|.++++|++|+|++|++++..|..+..+
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 566554 689999999999998888889999999 89999999997777889999999999999999997777778888
Q ss_pred c-cceeEeeccccccCCCcccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+ |+.|++++|.++...+..+..+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l 170 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRV 170 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTC
T ss_pred CCCCEEECCCCCcceeCHhHHhcC
Confidence 8 9999999999886555555444
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.3e-11 Score=125.11 Aligned_cols=97 Identities=21% Similarity=0.200 Sum_probs=86.7
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcc-ccCCCCCCEEEccCccccccCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSE-IGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~-~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
|..|+++++|+.|+|++|.+++..|..|+.+++| +|+|++|+|+ .+|.. |+++++|++|+|++|.+++..|..++.+
T Consensus 92 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 170 (597)
T 3oja_B 92 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT 170 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC
T ss_pred hHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcC
Confidence 4579999999999999999998778888999999 9999999999 56654 6899999999999999999999999999
Q ss_pred c-cceeEeeccccccCCCccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHL 100 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~ 100 (408)
+ |+.|++++|.+++..+..+
T Consensus 171 ~~L~~L~L~~N~l~~~~~~~l 191 (597)
T 3oja_B 171 TSLQNLQLSSNRLTHVDLSLI 191 (597)
T ss_dssp TTCCEEECTTSCCSBCCGGGC
T ss_pred CcCcEEECcCCCCCCcChhhh
Confidence 9 9999999999997644433
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.1e-12 Score=118.09 Aligned_cols=92 Identities=18% Similarity=0.148 Sum_probs=81.7
Q ss_pred CCccc--cCCccCCeEeccCCccccCCChhhccc-----ccc-EEEccccccccccCccccCCCCCCEEEccCcccccc-
Q 037624 2 IPLEI--GSLRNLVSLYLSGNNLTGSIPSSLGRL-----TSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGT- 72 (408)
Q Consensus 2 ip~~~--~~l~~l~~L~l~~N~l~g~~p~~~~~l-----~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~- 72 (408)
+|..+ +.+++|++|+|++|++++. |..++.+ ++| +|+|++|++++..|..++++++|++|+|++|+++|.
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 111 APPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp CCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred hHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 67776 8999999999999999976 9889888 899 999999999987779999999999999999999876
Q ss_pred -CCCcc--cccc-cceeEeecccccc
Q 037624 73 -IPYPL--GVLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 73 -~p~~~--~~~~-l~~l~l~~n~l~g 94 (408)
+|..+ +.++ |+.|++++|.+++
T Consensus 190 ~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 190 GLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp HHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred HHHHHHHhccCCCCCEEECCCCcCcc
Confidence 34445 7888 9999999999873
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-11 Score=130.60 Aligned_cols=94 Identities=21% Similarity=0.153 Sum_probs=53.9
Q ss_pred CccccCCccCCeEeccCCccccCC-Chhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCc--cc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSI-PSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYP--LG 78 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~-p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~--~~ 78 (408)
|..|+++++|++|||++|.+.+.+ |..|+++++| +|+|++|++++..|..|+++++|++|+|++|.+++.+|.. ++
T Consensus 41 ~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 120 (844)
T 3j0a_A 41 ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFR 120 (844)
T ss_dssp SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCS
T ss_pred hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCcccc
Confidence 444555566666666665555455 4455566666 5666666666555556666666666666666665555443 55
Q ss_pred ccc-cceeEeeccccccCC
Q 037624 79 VLP-LSYLDLSFNDLSGGI 96 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~ 96 (408)
.++ |+.|++++|.+++..
T Consensus 121 ~L~~L~~L~Ls~N~l~~~~ 139 (844)
T 3j0a_A 121 NLKALTRLDLSKNQIRSLY 139 (844)
T ss_dssp SCSSCCEEEEESCCCCCCC
T ss_pred ccCCCCEEECCCCcccccc
Confidence 555 666666666555443
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-11 Score=124.44 Aligned_cols=104 Identities=20% Similarity=0.176 Sum_probs=87.7
Q ss_pred CCccccCCccCCeEeccCCccccCCC-hhhcccccc-EEEccccccccccCccccCCCCCCEEEccCcccc-ccCCCccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK-GTIPYPLG 78 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p-~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~-g~~p~~~~ 78 (408)
+|+.++.+++|+.|+|++|.+++..| ..+..+++| .|+|++|++++.+|..+.++++|+.|+|++|.++ +.+|..+.
T Consensus 388 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 467 (570)
T 2z63_A 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467 (570)
T ss_dssp EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh
Confidence 35568888999999999999987666 467888999 8999999999888888889999999999999987 67888888
Q ss_pred ccc-cceeEeeccccccCCCcccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
.++ |+.|++++|.+++..|..+..+..
T Consensus 468 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 495 (570)
T 2z63_A 468 ELRNLTFLDLSQCQLEQLSPTAFNSLSS 495 (570)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cccCCCEEECCCCccccCChhhhhcccC
Confidence 888 999999999998887877765543
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-11 Score=125.76 Aligned_cols=92 Identities=23% Similarity=0.115 Sum_probs=66.4
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..|+++++|++|+|++|++++..|..|+++++| +|+|++|++++..|..++++++|++|+|++|.+++..|..++.++
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~ 129 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQK 129 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCT
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCC
Confidence 4456777777777777777776667777777777 777777777766677777777777777777777765566677777
Q ss_pred -cceeEeecccccc
Q 037624 82 -LSYLDLSFNDLSG 94 (408)
Q Consensus 82 -l~~l~l~~n~l~g 94 (408)
|++|++++|.+++
T Consensus 130 ~L~~L~L~~n~l~~ 143 (606)
T 3t6q_A 130 TLESLYLGSNHISS 143 (606)
T ss_dssp TCCEEECCSSCCCC
T ss_pred cccEEECCCCcccc
Confidence 7777777777766
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=9.3e-12 Score=124.78 Aligned_cols=95 Identities=22% Similarity=0.147 Sum_probs=71.7
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccc-cCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG-TIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g-~~p~~~~~~ 80 (408)
|..|+++++|++|+|++|++++..|..|+++++| +|+|++|++++..|..++++++|++|+|++|.+++ .+|..++.+
T Consensus 43 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 122 (549)
T 2z81_A 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNL 122 (549)
T ss_dssp SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTC
T ss_pred hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhcc
Confidence 4567788888888888888887777778888888 78888888886555567888888888888888876 456677777
Q ss_pred c-cceeEeeccccccCCC
Q 037624 81 P-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p 97 (408)
+ |+.|++++|.+.+.+|
T Consensus 123 ~~L~~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 123 TNLQTLRIGNVETFSEIR 140 (549)
T ss_dssp TTCCEEEEEESSSCCEEC
T ss_pred CCccEEECCCCccccccC
Confidence 7 7777777777555554
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=9.1e-12 Score=131.37 Aligned_cols=100 Identities=24% Similarity=0.210 Sum_probs=89.2
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcc--ccCCCCCCEEEccCccccccCC-Cccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSE--IGNLQELSHLDSRHIFIKGTIP-YPLG 78 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~--~~~l~~L~~l~l~~N~~~g~~p-~~~~ 78 (408)
|..|+++++|++|+|++|++++..|..|+++++| +|+|++|++++.+|.. ++++++|++|||++|.+++..| ..++
T Consensus 66 ~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 145 (844)
T 3j0a_A 66 KEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG 145 (844)
T ss_dssp TTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG
T ss_pred HHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh
Confidence 6679999999999999999998889999999999 9999999999888876 8999999999999999988765 5789
Q ss_pred ccc-cceeEeeccccccCCCccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTT 102 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~ 102 (408)
+++ |+.|++++|.+++..|..+..
T Consensus 146 ~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 146 KLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hCCCCCEEECCCCcCCeeCHHHccc
Confidence 999 999999999998887776654
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-11 Score=125.40 Aligned_cols=101 Identities=17% Similarity=0.010 Sum_probs=90.9
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||..+.. ++++|||++|++++..|..|+++++| +|+|++|++++..|..|+++++|++|+|++|++++..|..++.
T Consensus 26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 36777653 79999999999998889999999999 9999999999888999999999999999999999999999999
Q ss_pred cc-cceeEeeccccccCCCcccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
++ |++|++++|.+++..|..+..+
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l 128 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQ 128 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTC
T ss_pred cccccEeeccccCcccCCcchhccC
Confidence 99 9999999999998655555443
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=122.87 Aligned_cols=99 Identities=25% Similarity=0.267 Sum_probs=72.4
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||.++. ++|+.|+|++|++++..|.+++++++| +|+|++|++++..|..|+++++|++|||++|+++ .+|.. .+
T Consensus 46 ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 46 VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CC
T ss_pred CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--cc
Confidence 566554 678888888888886556677888888 7888888888666777888888888888888877 56665 56
Q ss_pred c-cceeEeecccccc-CCCcccccccc
Q 037624 81 P-LSYLDLSFNDLSG-GIPKHLTTKLR 105 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g-~~p~~~~~~~~ 105 (408)
+ |+.|++++|.+++ ++|..+..+..
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~ 147 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTK 147 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTT
T ss_pred ccCCEEECCCCCccccCchHhhcccCc
Confidence 6 8888888888776 44566655543
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.1e-11 Score=118.93 Aligned_cols=100 Identities=28% Similarity=0.230 Sum_probs=81.3
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.|.++++|+.|+|++|+++ .+| .+..+++| .|+|++|++++..|..|.++++|+.|+|++|++++..|..+..++ |
T Consensus 180 ~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 180 AFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp TTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred hhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 4677888888888888888 677 57788888 888888888877788888888999999999998888888888888 9
Q ss_pred ceeEeeccccccCCCccccccccc
Q 037624 83 SYLDLSFNDLSGGIPKHLTTKLRR 106 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~~~~~~~~ 106 (408)
+.|++++|++++..+..+..+...
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTC
T ss_pred CEEECCCCCCCccChhHhccccCC
Confidence 999999998887666655554433
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=113.95 Aligned_cols=96 Identities=25% Similarity=0.315 Sum_probs=62.2
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..+.++++|+.|+|++|+++ .+|..+. ++| .|+|++|++++..|..+..+++|+.|+|++|.+++..|..+..++
T Consensus 164 ~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 240 (330)
T 1xku_A 164 NGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 240 (330)
T ss_dssp TTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGST
T ss_pred hhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCC
Confidence 445666777777777777776 4665443 566 666666666665566666666666666666666666665666666
Q ss_pred -cceeEeeccccccCCCccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTT 102 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~ 102 (408)
|+.|++++|.++ .+|..+..
T Consensus 241 ~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 241 HLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp TCCEEECCSSCCS-SCCTTTTT
T ss_pred CCCEEECCCCcCc-cCChhhcc
Confidence 666666666666 55555443
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4.4e-13 Score=116.13 Aligned_cols=84 Identities=25% Similarity=0.248 Sum_probs=48.9
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.++++++|++|+|++|++++ +| .+..+++| .|+|++|+++ .+|..+..+++|++|+|++|++++ +| .+..++ |
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 55556666666666666653 55 55556666 5666666665 555555555566666666666654 33 355555 6
Q ss_pred ceeEeeccccc
Q 037624 83 SYLDLSFNDLS 93 (408)
Q Consensus 83 ~~l~l~~n~l~ 93 (408)
+.|++++|.++
T Consensus 118 ~~L~l~~N~i~ 128 (198)
T 1ds9_A 118 RVLYMSNNKIT 128 (198)
T ss_dssp SEEEESEEECC
T ss_pred CEEECCCCcCC
Confidence 66666666555
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-11 Score=120.33 Aligned_cols=101 Identities=22% Similarity=0.138 Sum_probs=88.8
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..|+++++|++|+|++|++++..+..+.++++| +|+|++|++++..|..+.++++|+.|+|++|.+++..|..+..++
T Consensus 73 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 152 (477)
T 2id5_A 73 PGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 152 (477)
T ss_dssp TTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCT
T ss_pred hhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCC
Confidence 6779999999999999999994444457899999 999999999988899999999999999999999999999999999
Q ss_pred -cceeEeeccccccCCCcccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
|+.|++++|.+++..+..+..+
T Consensus 153 ~L~~L~l~~n~l~~~~~~~l~~l 175 (477)
T 2id5_A 153 SLEQLTLEKCNLTSIPTEALSHL 175 (477)
T ss_dssp TCCEEEEESCCCSSCCHHHHTTC
T ss_pred CCCEEECCCCcCcccChhHhccc
Confidence 9999999999987655545444
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=118.13 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=76.3
Q ss_pred CCcc-ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLE-IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~-~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
||+. +..+++|++|+|++|.+++..|..++.+++| +|+|++|++++..|..++++++|++|+|++|.++...+..++.
T Consensus 60 l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 139 (390)
T 3o6n_A 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHN 139 (390)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcC
Confidence 4554 5677888888888888886666678888888 8888888888666667788888888888888888433333577
Q ss_pred cc-cceeEeeccccccCCCccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
++ |+.|++++|.+++..|..+..+.
T Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~ 165 (390)
T 3o6n_A 140 TPKLTTLSMSNNNLERIEDDTFQATT 165 (390)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTSSCT
T ss_pred CCCCcEEECCCCccCccChhhccCCC
Confidence 77 88888888888876666555443
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.6e-11 Score=115.70 Aligned_cols=88 Identities=25% Similarity=0.235 Sum_probs=79.0
Q ss_pred CeEeccCC-ccccCCChhhcccccc-EEEccc-cccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 13 VSLYLSGN-NLTGSIPSSLGRLTSC-TLTLSN-NKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 13 ~~L~l~~N-~l~g~~p~~~~~l~~L-~L~ls~-N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
..+++++| +|+ .||. +..+++| .|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|+.++ |+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 46799998 999 6999 9999999 999996 999977668899999999999999999999999999999 9999999
Q ss_pred ccccccCCCccccc
Q 037624 89 FNDLSGGIPKHLTT 102 (408)
Q Consensus 89 ~n~l~g~~p~~~~~ 102 (408)
+|+|++..+..+..
T Consensus 89 ~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 89 FNALESLSWKTVQG 102 (347)
T ss_dssp SSCCSCCCSTTTCS
T ss_pred CCccceeCHHHccc
Confidence 99999766655543
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-11 Score=124.97 Aligned_cols=98 Identities=23% Similarity=0.191 Sum_probs=77.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
.|+++++|++|+|++|.+++..|..++++++| +|+|++|+++ .+|. .|+++++|++|+|++|++++..|..++.++
T Consensus 44 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 122 (680)
T 1ziw_A 44 NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122 (680)
T ss_dssp GGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTT
T ss_pred HHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCC
Confidence 47788888888888888887778888888888 8888888888 4554 588888888888888888876667788888
Q ss_pred cceeEeeccccccCCCcccccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
|++|++++|.+++..|..+..+
T Consensus 123 L~~L~Ls~n~l~~~~~~~~~~l 144 (680)
T 1ziw_A 123 LITLDLSHNGLSSTKLGTQVQL 144 (680)
T ss_dssp CCEEECCSSCCSCCCCCSSSCC
T ss_pred CCEEECCCCcccccCchhhccc
Confidence 8888888888887777665443
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.20 E-value=2.8e-11 Score=118.45 Aligned_cols=99 Identities=24% Similarity=0.208 Sum_probs=82.0
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.+.++++|+.|+|++|+++ .+| .+..+++| .|+|++|++++..|..|.++++|+.|+|++|++++..|..+..++ |
T Consensus 191 ~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 268 (452)
T 3zyi_A 191 AFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASL 268 (452)
T ss_dssp TTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCC
Confidence 3677888888888888888 566 57888888 899999999987788899999999999999999988888888888 9
Q ss_pred ceeEeeccccccCCCcccccccc
Q 037624 83 SYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
+.|++++|++++..+..+..+..
T Consensus 269 ~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 269 VELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp CEEECCSSCCSCCCTTSSTTCTT
T ss_pred CEEECCCCcCCccChHHhccccC
Confidence 99999999998766665555443
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.1e-11 Score=117.72 Aligned_cols=100 Identities=20% Similarity=0.095 Sum_probs=77.3
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||.++. ++++.|+|++|++++..|..|.++++| .|+|++|++++..|..|.++++|++|+|++|++++..+..+..+
T Consensus 58 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (440)
T 3zyj_A 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL 135 (440)
T ss_dssp CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSC
T ss_pred CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcc
Confidence 566654 678888888888887777788888888 88888888886666778888888888888888886666678888
Q ss_pred c-cceeEeeccccccCCCcccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+ |+.|++++|.++...+..+..+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l 159 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRI 159 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTC
T ss_pred ccCceeeCCCCcccccCHHHhhhC
Confidence 8 8888888888876555555443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.2e-11 Score=114.12 Aligned_cols=90 Identities=20% Similarity=0.172 Sum_probs=60.4
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEe
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDL 87 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l 87 (408)
++|+.|+|++|.+++..|..+..+++| .|+|++|++++..|..+..+++|+.|+|++|+++ .+|..+..++ |+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 466666666666665555666677777 6777777777555556677777777777777776 6666666666 777777
Q ss_pred eccccccCCCccc
Q 037624 88 SFNDLSGGIPKHL 100 (408)
Q Consensus 88 ~~n~l~g~~p~~~ 100 (408)
++|++++..+..+
T Consensus 272 ~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 272 HTNNITKVGVNDF 284 (332)
T ss_dssp CSSCCCBCCTTSS
T ss_pred CCCCCCccChhHc
Confidence 7777765544443
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-11 Score=123.09 Aligned_cols=88 Identities=30% Similarity=0.257 Sum_probs=81.8
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccc-cCCCcccccc
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG-TIPYPLGVLP 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g-~~p~~~~~~~ 81 (408)
..|.++++|++|+|++|++++..|..|+++++| +|||++|+++ .+|.. .+++|++|+|++|.+++ .+|..++.++
T Consensus 39 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~ 115 (520)
T 2z7x_B 39 SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMS 115 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCT
T ss_pred hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCC
Confidence 578999999999999999998889999999999 9999999999 78887 89999999999999997 6889999999
Q ss_pred -cceeEeecccccc
Q 037624 82 -LSYLDLSFNDLSG 94 (408)
Q Consensus 82 -l~~l~l~~n~l~g 94 (408)
|+.|++++|.+++
T Consensus 116 ~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 116 QLKFLGLSTTHLEK 129 (520)
T ss_dssp TCCEEEEEESSCCG
T ss_pred cceEEEecCcccch
Confidence 9999999999876
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.1e-11 Score=103.41 Aligned_cols=89 Identities=21% Similarity=0.167 Sum_probs=71.2
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccc-cc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLT-SC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~-~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
++.++++|+.|+|++|+++ .+|. +..+. +| .|+|++|++++ + ..++.+++|++|+|++|.+++..|..+..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4667889999999999998 6764 55555 88 89999999995 4 5788999999999999999865445458888
Q ss_pred cceeEeeccccccCCCc
Q 037624 82 LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~ 98 (408)
|+.|++++|.++ .+|.
T Consensus 90 L~~L~L~~N~i~-~~~~ 105 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGD 105 (176)
T ss_dssp CCEEECCSCCCC-CGGG
T ss_pred CCEEECCCCcCC-cchh
Confidence 999999999985 4554
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.7e-11 Score=114.53 Aligned_cols=100 Identities=24% Similarity=0.224 Sum_probs=73.4
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
||.++. ++|++|+|++|++++..+..+.++++| .|+|++|++++..|..++++++|++|+|++|++++..+..++.+
T Consensus 46 iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 123 (353)
T 2z80_A 46 IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPL 123 (353)
T ss_dssp CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTC
T ss_pred cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCC
Confidence 566554 478888888888885445578888888 88888888887667778888888888888888885444447778
Q ss_pred c-cceeEeeccccccCCC-cccccc
Q 037624 81 P-LSYLDLSFNDLSGGIP-KHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p-~~~~~~ 103 (408)
+ |++|++++|.+++..+ ..+..+
T Consensus 124 ~~L~~L~L~~n~l~~l~~~~~~~~l 148 (353)
T 2z80_A 124 SSLTFLNLLGNPYKTLGETSLFSHL 148 (353)
T ss_dssp TTCSEEECTTCCCSSSCSSCSCTTC
T ss_pred ccCCEEECCCCCCcccCchhhhccC
Confidence 7 8888888888874333 244443
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-11 Score=114.27 Aligned_cols=97 Identities=26% Similarity=0.225 Sum_probs=74.5
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcc-ccCCCCCCEEEccCccccccCCC--ccccc
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSE-IGNLQELSHLDSRHIFIKGTIPY--PLGVL 80 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~-~~~l~~L~~l~l~~N~~~g~~p~--~~~~~ 80 (408)
.++++++|++|+|++|++++..|..++++++| +|+|++|+++ .+|.. ++++++|++|+|++|+++ .+|. .+..+
T Consensus 71 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l 148 (353)
T 2z80_A 71 DLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHL 148 (353)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTC
T ss_pred HhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccC
Confidence 57888888888888888887777778888888 8888888888 45554 788888888888888888 4554 67778
Q ss_pred c-cceeEeeccc-cccCCCcccccc
Q 037624 81 P-LSYLDLSFND-LSGGIPKHLTTK 103 (408)
Q Consensus 81 ~-l~~l~l~~n~-l~g~~p~~~~~~ 103 (408)
+ |+.|++++|+ +....|..+..+
T Consensus 149 ~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 149 TKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp TTCCEEEEEESSSCCEECTTTTTTC
T ss_pred CCCcEEECCCCccccccCHHHccCC
Confidence 8 8888888884 554445555444
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.4e-11 Score=121.14 Aligned_cols=90 Identities=24% Similarity=0.192 Sum_probs=82.4
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccc-cCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG-TIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g-~~p~~~~~~ 80 (408)
|..|+++++|++|+|++|++++..|..|+.+++| +|||++|+++ .+|.. .+++|++|+|++|++++ .+|..++.+
T Consensus 69 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l 145 (562)
T 3a79_B 69 MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNL 145 (562)
T ss_dssp GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGC
T ss_pred hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhccc
Confidence 3579999999999999999998889999999999 9999999999 89987 89999999999999997 567899999
Q ss_pred c-cceeEeeccccccC
Q 037624 81 P-LSYLDLSFNDLSGG 95 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~ 95 (408)
+ |+.|++++|.+++.
T Consensus 146 ~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 146 TKLTFLGLSAAKFRQL 161 (562)
T ss_dssp TTCCEEEEECSBCCTT
T ss_pred CcccEEecCCCccccC
Confidence 9 99999999998763
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=6e-11 Score=111.03 Aligned_cols=97 Identities=21% Similarity=0.256 Sum_probs=78.5
Q ss_pred cccCCccCCeEeccCCccc--cCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 5 EIGSLRNLVSLYLSGNNLT--GSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~--g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
.++++++|+.|+|++|.++ |..|..+..+++| .|+|++|+++ .+|..+. ++|+.|+|++|.+++..|..+..++
T Consensus 140 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~ 216 (330)
T 1xku_A 140 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLN 216 (330)
T ss_dssp HHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCT
T ss_pred HhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCC
Confidence 4778888888888888885 4677788888888 8888888888 6787665 7888888888888888888888888
Q ss_pred -cceeEeeccccccCCCccccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
|+.|++++|.+++..+..+..+.
T Consensus 217 ~L~~L~Ls~n~l~~~~~~~~~~l~ 240 (330)
T 1xku_A 217 NLAKLGLSFNSISAVDNGSLANTP 240 (330)
T ss_dssp TCCEEECCSSCCCEECTTTGGGST
T ss_pred CCCEEECCCCcCceeChhhccCCC
Confidence 88888888888877666665543
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=6.2e-11 Score=113.59 Aligned_cols=93 Identities=22% Similarity=0.214 Sum_probs=84.7
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcc-ccCCCCCCEEEccCccccccCCCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSE-IGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~-~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
|..|+.+++|++|+|++|++++..|..++.+++| +|+|++|+++ .+|.. ++++++|++|+|++|.+++..|..+..+
T Consensus 86 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 164 (390)
T 3o6n_A 86 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT 164 (390)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSC
T ss_pred hhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCC
Confidence 3478999999999999999998778889999999 9999999999 77776 5899999999999999998888889999
Q ss_pred c-cceeEeeccccccCC
Q 037624 81 P-LSYLDLSFNDLSGGI 96 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~ 96 (408)
+ |+.|++++|.+++..
T Consensus 165 ~~L~~L~l~~n~l~~~~ 181 (390)
T 3o6n_A 165 TSLQNLQLSSNRLTHVD 181 (390)
T ss_dssp TTCCEEECCSSCCSBCC
T ss_pred CCCCEEECCCCcCCccc
Confidence 9 999999999998653
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-11 Score=107.87 Aligned_cols=98 Identities=22% Similarity=0.270 Sum_probs=72.5
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccc-cccccCccccCCCCCCEEEccC-ccccccCCCccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNK-LSGSIPSEIGNLQELSHLDSRH-IFIKGTIPYPLG 78 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~-l~g~iP~~~~~l~~L~~l~l~~-N~~~g~~p~~~~ 78 (408)
||. +. ++|+.|+|++|++++..|..+..+++| .|+|++|+ +++.-|..+.++++|++|+|++ |++++..|..+.
T Consensus 26 ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~ 102 (239)
T 2xwt_C 26 IPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALK 102 (239)
T ss_dssp CCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEE
T ss_pred cCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhC
Confidence 555 33 378888888888885555578888888 88888886 7744444778888888888888 888866667778
Q ss_pred ccc-cceeEeeccccccCCCccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
.++ |+.|++++|.+++ +|. +....
T Consensus 103 ~l~~L~~L~l~~n~l~~-lp~-~~~l~ 127 (239)
T 2xwt_C 103 ELPLLKFLGIFNTGLKM-FPD-LTKVY 127 (239)
T ss_dssp CCTTCCEEEEEEECCCS-CCC-CTTCC
T ss_pred CCCCCCEEeCCCCCCcc-ccc-ccccc
Confidence 887 8888888888876 554 44333
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.16 E-value=4e-11 Score=106.87 Aligned_cols=102 Identities=20% Similarity=0.193 Sum_probs=84.5
Q ss_pred CCc-cccCCccCCeEeccCCc-cccCCChhhcccccc-EEEccc-cccccccCccccCCCCCCEEEccCccccccCCCcc
Q 037624 2 IPL-EIGSLRNLVSLYLSGNN-LTGSIPSSLGRLTSC-TLTLSN-NKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPL 77 (408)
Q Consensus 2 ip~-~~~~l~~l~~L~l~~N~-l~g~~p~~~~~l~~L-~L~ls~-N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~ 77 (408)
||+ .++++++|++|+|++|. +++..|..+..+++| .|+|++ |++++..|..+.++++|++|+|++|.+++ +|. +
T Consensus 46 i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~ 123 (239)
T 2xwt_C 46 IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-L 123 (239)
T ss_dssp ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-C
T ss_pred ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-c
Confidence 344 68899999999999997 885445589999999 999999 99995555689999999999999999996 777 7
Q ss_pred cccc-cc---eeEeecc-ccccCCCcccccccc
Q 037624 78 GVLP-LS---YLDLSFN-DLSGGIPKHLTTKLR 105 (408)
Q Consensus 78 ~~~~-l~---~l~l~~n-~l~g~~p~~~~~~~~ 105 (408)
+.++ |+ .|++++| .+++..+..+..+..
T Consensus 124 ~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~ 156 (239)
T 2xwt_C 124 TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCN 156 (239)
T ss_dssp TTCCBCCSEEEEEEESCTTCCEECTTTTTTTBS
T ss_pred ccccccccccEEECCCCcchhhcCcccccchhc
Confidence 8888 87 9999999 888666655654443
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=5.3e-11 Score=122.50 Aligned_cols=101 Identities=19% Similarity=0.199 Sum_probs=89.7
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||.++. ++|++|+|++|++++..|..++++++| +|+|++|++++..|..++++++|++|+|++|.+++..+..++.
T Consensus 18 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 18 QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 3777765 799999999999997666789999999 9999999999888999999999999999999999655557999
Q ss_pred cc-cceeEeeccccccCCCcccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
++ |++|++++|.+++..|..+..+
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l 120 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQ 120 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTC
T ss_pred CCCCCEEECCCCccCccChhHcccc
Confidence 99 9999999999998777776654
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-11 Score=103.44 Aligned_cols=89 Identities=21% Similarity=0.315 Sum_probs=76.1
Q ss_pred cccCCc-cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccc-cCCCCCCEEEccCccccccCCC--cccc
Q 037624 5 EIGSLR-NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEI-GNLQELSHLDSRHIFIKGTIPY--PLGV 79 (408)
Q Consensus 5 ~~~~l~-~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~-~~l~~L~~l~l~~N~~~g~~p~--~~~~ 79 (408)
.+..+. +|+.|+|++|++++ + ..++.+++| +|+|++|+++ .+|+.+ +.+++|++|+|++|+++ .+|. .+..
T Consensus 36 ~~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~ 111 (176)
T 1a9n_A 36 NLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLAS 111 (176)
T ss_dssp CGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGG
T ss_pred HhhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhc
Confidence 355555 99999999999995 4 589999999 9999999999 566554 89999999999999996 6776 7889
Q ss_pred cc-cceeEeeccccccCCCc
Q 037624 80 LP-LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~ 98 (408)
++ |+.|++++|+++. +|.
T Consensus 112 l~~L~~L~l~~N~i~~-~~~ 130 (176)
T 1a9n_A 112 LKSLTYLCILRNPVTN-KKH 130 (176)
T ss_dssp CTTCCEEECCSSGGGG-STT
T ss_pred CCCCCEEEecCCCCCC-cHh
Confidence 99 9999999999984 454
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.15 E-value=8.9e-11 Score=109.97 Aligned_cols=101 Identities=21% Similarity=0.139 Sum_probs=86.6
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc-
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL- 80 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~- 80 (408)
|..+..+++|+.|+|++|++++..|..++.+++| .|+|++|+++ .+|..+..+++|+.|+|++|++++..+..+...
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 3578999999999999999998777789999999 9999999999 999999999999999999999997766666543
Q ss_pred -----c-cceeEeeccccc--cCCCccccccc
Q 037624 81 -----P-LSYLDLSFNDLS--GGIPKHLTTKL 104 (408)
Q Consensus 81 -----~-l~~l~l~~n~l~--g~~p~~~~~~~ 104 (408)
. |+.|++++|++. +..|..+....
T Consensus 289 ~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp CCSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred cccccccccceEeecCcccccccCcccccccc
Confidence 4 899999999987 45555555443
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=111.94 Aligned_cols=95 Identities=23% Similarity=0.250 Sum_probs=55.4
Q ss_pred CccccCCccCCeEeccCCccccC--CC--hhhcccccc-EEEccccccccccCc---c-ccCCCCCCEEEccCccccccC
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGS--IP--SSLGRLTSC-TLTLSNNKLSGSIPS---E-IGNLQELSHLDSRHIFIKGTI 73 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~--~p--~~~~~l~~L-~L~ls~N~l~g~iP~---~-~~~l~~L~~l~l~~N~~~g~~ 73 (408)
|..++++++|++|||++|+++|. +| ..++.+++| +|+|++|+++ .+|. . ++++++|++|||++|++++.+
T Consensus 162 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 240 (310)
T 4glp_A 162 CEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATV 240 (310)
T ss_dssp TTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCC
T ss_pred HHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccc
Confidence 34567777777777777776642 22 122456666 6666666665 3332 1 345566666666666666655
Q ss_pred CCccccc---c-cceeEeeccccccCCCcc
Q 037624 74 PYPLGVL---P-LSYLDLSFNDLSGGIPKH 99 (408)
Q Consensus 74 p~~~~~~---~-l~~l~l~~n~l~g~~p~~ 99 (408)
|..++.+ + |+.|++++|.++ .+|..
T Consensus 241 p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~ 269 (310)
T 4glp_A 241 NPSAPRCMWSSALNSLNLSFAGLE-QVPKG 269 (310)
T ss_dssp CSCCSSCCCCTTCCCEECCSSCCC-SCCSC
T ss_pred hhhHHhccCcCcCCEEECCCCCCC-chhhh
Confidence 6555554 4 666666666666 44443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.5e-11 Score=116.88 Aligned_cols=84 Identities=26% Similarity=0.227 Sum_probs=44.7
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcccc-CCCCCCEEEccCccccccCCCcccccc-ccee
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIG-NLQELSHLDSRHIFIKGTIPYPLGVLP-LSYL 85 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~-~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l 85 (408)
+++|+.|+|++|.+++..|..++.+++| .|+|++|++++.+|..+. ++++|+.|+|++|.|++..+ ...++ |+.|
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L 196 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTL 196 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEE
Confidence 3445555555555555555555555555 556666555555555554 45555555555555554422 12344 5555
Q ss_pred Eeecccccc
Q 037624 86 DLSFNDLSG 94 (408)
Q Consensus 86 ~l~~n~l~g 94 (408)
++++|.+++
T Consensus 197 ~Ls~N~l~~ 205 (487)
T 3oja_A 197 DLSSNKLAF 205 (487)
T ss_dssp ECCSSCCCE
T ss_pred ECCCCCCCC
Confidence 555555554
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.6e-11 Score=109.37 Aligned_cols=86 Identities=22% Similarity=0.145 Sum_probs=73.9
Q ss_pred CccCCeEeccCCccccCCChhh--cccccc-EEEccccccccccC----ccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSL--GRLTSC-TLTLSNNKLSGSIP----SEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~--~~l~~L-~L~ls~N~l~g~iP----~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
+++|+.|+|++|.++|.+|..+ +.+++| +|+|++|++++.+| ..+..+++|++|+|++|++++..|..++.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4679999999999998899888 889999 89999999997766 3456788999999999999888888888888
Q ss_pred -cceeEeecccccc
Q 037624 82 -LSYLDLSFNDLSG 94 (408)
Q Consensus 82 -l~~l~l~~n~l~g 94 (408)
|++|++++|++.+
T Consensus 170 ~L~~L~Ls~N~l~~ 183 (310)
T 4glp_A 170 ALTSLDLSDNPGLG 183 (310)
T ss_dssp TCCEEECCSCTTCH
T ss_pred CCCEEECCCCCCcc
Confidence 9999999998765
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-10 Score=102.76 Aligned_cols=82 Identities=23% Similarity=0.281 Sum_probs=49.4
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
+..+++|+.|+|++|+++ .+| .+..+++| .|+|++|+++ .+|. +.++++|+.|+|++|++++ +|.... + |+
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCC
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccCC-cCcccc--Cccc
Confidence 445566666666666666 555 56666666 6666666666 3443 6666666666666666664 333222 4 66
Q ss_pred eeEeecccccc
Q 037624 84 YLDLSFNDLSG 94 (408)
Q Consensus 84 ~l~l~~n~l~g 94 (408)
.|++++|.+++
T Consensus 110 ~L~L~~N~l~~ 120 (263)
T 1xeu_A 110 RLFLDNNELRD 120 (263)
T ss_dssp EEECCSSCCSB
T ss_pred EEEccCCccCC
Confidence 66666666654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.3e-10 Score=100.65 Aligned_cols=83 Identities=25% Similarity=0.273 Sum_probs=51.9
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+++.+++|+.|+|++|+++ .+|. +..+++| .|+|++|+++ .+|.... ++|+.|+|++|++++ +| .+..++ |
T Consensus 58 ~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L 130 (263)
T 1xeu_A 58 GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNL 130 (263)
T ss_dssp TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTC
T ss_pred HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEccCCccCC-Ch-hhcCcccc
Confidence 5677777888888888877 4554 7777777 7777777777 3554222 556666666665553 22 355555 5
Q ss_pred ceeEeecccccc
Q 037624 83 SYLDLSFNDLSG 94 (408)
Q Consensus 83 ~~l~l~~n~l~g 94 (408)
+.|++++|.+++
T Consensus 131 ~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 131 EILSIRNNKLKS 142 (263)
T ss_dssp CEEECTTSCCCB
T ss_pred cEEECCCCcCCC
Confidence 555555555554
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.03 E-value=9.1e-11 Score=117.45 Aligned_cols=54 Identities=28% Similarity=0.348 Sum_probs=26.1
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCcccc
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK 70 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~ 70 (408)
+++|+.|+|++|+|++ +|. .+++| .|+|++|+|++ +|. ++ ++|+.|+|++|+|+
T Consensus 139 l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 139 PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 4455555555555553 443 34445 45555555553 444 33 44444444444444
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-10 Score=107.72 Aligned_cols=93 Identities=18% Similarity=0.128 Sum_probs=52.3
Q ss_pred cccCCccCCeEeccCCccccCCChhhc-ccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLG-RLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~-~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
.++.+++|++|+|++|.+++..|..+. .+++| .|+|++|+++ .+|. ...+++|++|+|++|++++ +|..+..++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~ 215 (317)
T 3o53_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAG 215 (317)
T ss_dssp CTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEEC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTT
T ss_pred hhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-cccc-ccccccCCEEECCCCcCCc-chhhhcccCc
Confidence 455556666666666666654454443 45666 5666666665 2332 2236666666666666663 334466666
Q ss_pred cceeEeeccccccCCCcccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLT 101 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~ 101 (408)
|+.|++++|.++. +|..+.
T Consensus 216 L~~L~L~~N~l~~-l~~~~~ 234 (317)
T 3o53_A 216 VTWISLRNNKLVL-IEKALR 234 (317)
T ss_dssp CSEEECTTSCCCE-ECTTCC
T ss_pred ccEEECcCCcccc-hhhHhh
Confidence 6666666666663 444443
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-10 Score=105.03 Aligned_cols=87 Identities=32% Similarity=0.436 Sum_probs=70.2
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
++..+++|+.|+|++|+++ .+|. +..+++| .|+|++|++++ +| .+..+++|+.|+|++|++++ +|. +..++ |
T Consensus 58 ~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L 131 (308)
T 1h6u_A 58 GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNL 131 (308)
T ss_dssp TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTC
T ss_pred hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCC
Confidence 5778889999999999988 5665 8888888 89999998884 55 68888889999999998885 443 77888 8
Q ss_pred ceeEeeccccccCCC
Q 037624 83 SYLDLSFNDLSGGIP 97 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p 97 (408)
+.|++++|.+++..+
T Consensus 132 ~~L~l~~n~l~~~~~ 146 (308)
T 1h6u_A 132 QVLYLDLNQITNISP 146 (308)
T ss_dssp CEEECCSSCCCCCGG
T ss_pred CEEECCCCccCcCcc
Confidence 888888888876543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-10 Score=104.86 Aligned_cols=86 Identities=23% Similarity=0.311 Sum_probs=57.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.++.+++|+.|+|++|++++ +|. +..+++| .|+|++|++++ +|. ++.+++|+.|+|++|.+++. |. +..++ |
T Consensus 102 ~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L 175 (308)
T 1h6u_A 102 AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDL-TP-LANLSKL 175 (308)
T ss_dssp GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTC
T ss_pred hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCC-hh-hcCCCCC
Confidence 46677777777777777773 443 6777777 77777777773 443 66777777777777777643 33 66666 7
Q ss_pred ceeEeeccccccCC
Q 037624 83 SYLDLSFNDLSGGI 96 (408)
Q Consensus 83 ~~l~l~~n~l~g~~ 96 (408)
+.|++++|.+++..
T Consensus 176 ~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 176 TTLKADDNKISDIS 189 (308)
T ss_dssp CEEECCSSCCCCCG
T ss_pred CEEECCCCccCcCh
Confidence 77777777766543
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=1e-10 Score=108.85 Aligned_cols=94 Identities=23% Similarity=0.218 Sum_probs=79.6
Q ss_pred Cccc-cCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 3 PLEI-GSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 3 p~~~-~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
|..+ ..+++|++|+|++|.+++ +| ....+++| .|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~-~~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYD-VK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCE-EE-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCcc-cc-cccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 3444 478999999999999994 45 34458999 9999999999 67778999999999999999999 688889999
Q ss_pred c-cceeEeeccccc-cCCCccc
Q 037624 81 P-LSYLDLSFNDLS-GGIPKHL 100 (408)
Q Consensus 81 ~-l~~l~l~~n~l~-g~~p~~~ 100 (408)
+ |+.|++++|+++ +.+|.++
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHH
Confidence 9 999999999998 5444444
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.02 E-value=3.6e-11 Score=103.94 Aligned_cols=86 Identities=27% Similarity=0.398 Sum_probs=79.4
Q ss_pred ccCCccCCeEeccCCccccCCCh------hhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPS------SLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~------~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+....+++.++|+.|.++|.+|. .++.+++| .|+|++|++++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567899999999999999998 99999999 99999999995 88 8999999999999999999 7898888
Q ss_pred ccc-cceeEeecccccc
Q 037624 79 VLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g 94 (408)
.++ |+.|++++|.+++
T Consensus 91 ~~~~L~~L~L~~N~l~~ 107 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS 107 (198)
T ss_dssp HHHHCSEEEEEEEECCC
T ss_pred cCCcCCEEECcCCcCCc
Confidence 888 9999999999986
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4.6e-10 Score=103.11 Aligned_cols=86 Identities=30% Similarity=0.385 Sum_probs=56.8
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++++++|+.|+|++|.+++ +| .++.+++| .|+|++|++++ + +.+..+++|+.|+|++|++++. ..++.++ |+
T Consensus 86 l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 159 (291)
T 1h6t_A 86 LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLD 159 (291)
T ss_dssp GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCC
Confidence 6677777777777777763 44 36677777 67777777763 3 3566677777777777777643 4566666 77
Q ss_pred eeEeeccccccCCC
Q 037624 84 YLDLSFNDLSGGIP 97 (408)
Q Consensus 84 ~l~l~~n~l~g~~p 97 (408)
.|++++|.+++..|
T Consensus 160 ~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 160 TLSLEDNQISDIVP 173 (291)
T ss_dssp EEECCSSCCCCCGG
T ss_pred EEEccCCccccchh
Confidence 77777777665443
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4.3e-10 Score=103.36 Aligned_cols=85 Identities=34% Similarity=0.428 Sum_probs=74.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
++..+++|+.|+|++|++++ +|. ++.+++| .|+|++|++++ +| .++.+++|++|+|++|++++ + ..+..++ |
T Consensus 63 ~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L 136 (291)
T 1h6t_A 63 GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQL 136 (291)
T ss_dssp TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTC
T ss_pred hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCC
Confidence 47889999999999999995 555 9999999 99999999994 55 49999999999999999986 3 4688888 9
Q ss_pred ceeEeeccccccC
Q 037624 83 SYLDLSFNDLSGG 95 (408)
Q Consensus 83 ~~l~l~~n~l~g~ 95 (408)
+.|++++|.+++.
T Consensus 137 ~~L~l~~n~l~~~ 149 (291)
T 1h6t_A 137 ESLYLGNNKITDI 149 (291)
T ss_dssp CEEECCSSCCCCC
T ss_pred CEEEccCCcCCcc
Confidence 9999999999875
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-10 Score=114.29 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=14.9
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRL 33 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l 33 (408)
||++|++|++|++|+|++|.++|.+|.+++.+
T Consensus 26 iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l 57 (454)
T 1jl5_A 26 MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQ 57 (454)
T ss_dssp --------CCHHHHHHHHHHHHHTSCTTSCCC
T ss_pred CChhHhcccchhhhhccCCcccccCCcccccc
Confidence 56666666666666666666666666655543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.4e-10 Score=111.29 Aligned_cols=72 Identities=28% Similarity=0.426 Sum_probs=34.6
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEe
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDL 87 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l 87 (408)
++|+.|+|++|+|+ .+| ..+++| .|+|++|+|++ ||. +++ +|+.|+|++|+|++ +|. .++ |+.|++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 45555555555555 455 334555 55555555553 454 333 44455555554443 333 233 444444
Q ss_pred eccccc
Q 037624 88 SFNDLS 93 (408)
Q Consensus 88 ~~n~l~ 93 (408)
++|.++
T Consensus 148 s~N~l~ 153 (571)
T 3cvr_A 148 DNNQLT 153 (571)
T ss_dssp CSSCCS
T ss_pred CCCccC
Confidence 444444
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=98.98 E-value=6.6e-10 Score=112.27 Aligned_cols=83 Identities=34% Similarity=0.444 Sum_probs=38.4
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|+.|+|++|++++ + +.+..|++| .|+|++|++++ + ..++.|++|+.|+|++|.+++..| +..++ |+
T Consensus 105 l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 178 (605)
T 1m9s_A 105 LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 178 (605)
T ss_dssp STTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCCchh--hccCCCCC
Confidence 4444444444444444442 2 234444444 44444444442 2 334445555555555555544333 44444 55
Q ss_pred eeEeecccccc
Q 037624 84 YLDLSFNDLSG 94 (408)
Q Consensus 84 ~l~l~~n~l~g 94 (408)
.|+|++|++++
T Consensus 179 ~L~Ls~N~i~~ 189 (605)
T 1m9s_A 179 NLYLSKNHISD 189 (605)
T ss_dssp EEECCSSCCCB
T ss_pred EEECcCCCCCC
Confidence 55555555443
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=98.97 E-value=7e-10 Score=104.69 Aligned_cols=97 Identities=22% Similarity=0.242 Sum_probs=81.6
Q ss_pred CCCccccCCccCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCc-cccCCCCCCE-EEccCccccccCCCc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSH-LDSRHIFIKGTIPYP 76 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~-l~l~~N~~~g~~p~~ 76 (408)
+||.+| .++++.|+|++|+|+ .||. .|.++++| +|+|++|++.+.+|. .|.++++|.. ++++.|++++..|..
T Consensus 23 ~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 23 EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 478776 368999999999999 6765 68999999 999999999878886 5778988775 677789999888889
Q ss_pred ccccc-cceeEeeccccccCCCccc
Q 037624 77 LGVLP-LSYLDLSFNDLSGGIPKHL 100 (408)
Q Consensus 77 ~~~~~-l~~l~l~~n~l~g~~p~~~ 100 (408)
+..++ |+.|++++|.++...+..+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred hhhccccccccccccccccCCchhh
Confidence 99999 9999999999987655443
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=98.97 E-value=8.9e-10 Score=111.32 Aligned_cols=87 Identities=32% Similarity=0.421 Sum_probs=77.8
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
+.++.|++|+.|+|++|+|++ + ..++.|++| .|+|++|+|++..| +..|++|+.|+|++|+|++ +| .+..++
T Consensus 125 ~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~ 198 (605)
T 1m9s_A 125 NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKN 198 (605)
T ss_dssp GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTT
T ss_pred ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCC
Confidence 458899999999999999995 4 689999999 99999999997666 9999999999999999996 44 588999
Q ss_pred cceeEeeccccccCC
Q 037624 82 LSYLDLSFNDLSGGI 96 (408)
Q Consensus 82 l~~l~l~~n~l~g~~ 96 (408)
|+.|+|++|++++..
T Consensus 199 L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 199 LDVLELFSQECLNKP 213 (605)
T ss_dssp CSEEECCSEEEECCC
T ss_pred CCEEEccCCcCcCCc
Confidence 999999999998753
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.97 E-value=9.2e-10 Score=107.72 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=48.5
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+++++++|++|+|++|.+++ +| .++.+++| .|+|++|++++ +| ++.+++|++|+|++|.+++. | ++.++ |
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 45556666666666666663 44 46666666 66666666663 34 55666666666666666542 2 55555 6
Q ss_pred ceeEeecccccc
Q 037624 83 SYLDLSFNDLSG 94 (408)
Q Consensus 83 ~~l~l~~n~l~g 94 (408)
+.|++++|.+++
T Consensus 109 ~~L~L~~N~l~~ 120 (457)
T 3bz5_A 109 TYLNCDTNKLTK 120 (457)
T ss_dssp CEEECCSSCCSC
T ss_pred CEEECCCCcCCe
Confidence 666666666554
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.3e-10 Score=105.78 Aligned_cols=88 Identities=26% Similarity=0.311 Sum_probs=79.0
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
+..+++|+.|+|++|.+++ + +.+..+++| .|+|++|++++ +| .+..+++|+.|+|++|.+++..|..++.++ |+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 7889999999999999994 5 478899999 99999999994 54 588999999999999999999999999999 99
Q ss_pred eeEeeccccccCCC
Q 037624 84 YLDLSFNDLSGGIP 97 (408)
Q Consensus 84 ~l~l~~n~l~g~~p 97 (408)
.|++++|++++..|
T Consensus 315 ~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 315 TLFLSQNHITDIRP 328 (347)
T ss_dssp EEECCSSSCCCCGG
T ss_pred EEEccCCccccccC
Confidence 99999999998766
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=98.96 E-value=5.3e-11 Score=113.94 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=72.9
Q ss_pred cccCCccCCeEeccCCccc--c---CCChhhcccccc-EEEccccccc----cccCccccCCCCCCEEEccCcccccc--
Q 037624 5 EIGSLRNLVSLYLSGNNLT--G---SIPSSLGRLTSC-TLTLSNNKLS----GSIPSEIGNLQELSHLDSRHIFIKGT-- 72 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~--g---~~p~~~~~l~~L-~L~ls~N~l~----g~iP~~~~~l~~L~~l~l~~N~~~g~-- 72 (408)
.+..+++|++|+|++|+++ | .+|..+..+++| .|+|++|+++ +.+|..+..+++|++|+|++|.+++.
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 4567788888888888887 3 344477788888 8888888886 67888888888888888888888766
Q ss_pred --CCCcc--cccc-cceeEeecccccc----CCCccc
Q 037624 73 --IPYPL--GVLP-LSYLDLSFNDLSG----GIPKHL 100 (408)
Q Consensus 73 --~p~~~--~~~~-l~~l~l~~n~l~g----~~p~~~ 100 (408)
+|..+ +.++ |+.|++++|.+++ .+|..+
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 56665 3367 8888888888887 366554
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=98.94 E-value=7.6e-10 Score=104.10 Aligned_cols=94 Identities=23% Similarity=0.294 Sum_probs=80.3
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|+.|+|++|+++ .+|. +..+++| .|+|++|++++ + +.+..+++|++|+|++|.+++. | .+..++ |+
T Consensus 217 ~~~~~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~ 290 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLN 290 (347)
T ss_dssp GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCS
T ss_pred hhcCCcCCEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCC
Confidence 778999999999999999 5665 8999999 99999999994 5 4689999999999999999864 3 578888 99
Q ss_pred eeEeeccccccCCCcccccccc
Q 037624 84 YLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 84 ~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
.|++++|.+++..|..+..+..
T Consensus 291 ~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 291 SLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp EEECCSSCCCGGGHHHHHTCTT
T ss_pred EEECcCCcCCCcChhHhhcccc
Confidence 9999999999887776665543
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=98.94 E-value=9.1e-10 Score=108.09 Aligned_cols=86 Identities=27% Similarity=0.356 Sum_probs=60.6
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|+.|+|++|++++ +|. ++.+++| .|+|++|++++..| +..+++|+.|++++|.+++. ..+..++ |+
T Consensus 283 ~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 356 (466)
T 1o6v_A 283 LAGLTALTNLELNENQLED-ISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNIN 356 (466)
T ss_dssp GTTCTTCSEEECCSSCCSC-CGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCC
T ss_pred ccCCCccCeEEcCCCcccC-chh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCC
Confidence 6677777888888887774 332 6777777 77777777775544 66777777777777777754 3566666 77
Q ss_pred eeEeeccccccCCC
Q 037624 84 YLDLSFNDLSGGIP 97 (408)
Q Consensus 84 ~l~l~~n~l~g~~p 97 (408)
.|++++|++++..|
T Consensus 357 ~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 357 WLSAGHNQISDLTP 370 (466)
T ss_dssp EEECCSSCCCBCGG
T ss_pred EEeCCCCccCccch
Confidence 77777777776655
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=98.93 E-value=8.6e-10 Score=107.83 Aligned_cols=60 Identities=28% Similarity=0.417 Sum_probs=31.6
Q ss_pred cc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEeecccccc--CCCccccc
Q 037624 35 SC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG--GIPKHLTT 102 (408)
Q Consensus 35 ~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~g--~~p~~~~~ 102 (408)
+| .|+|++|++++ +|.. +++|++|+|++|+++ .+|. .++ |+.|++++|++++ .+|.++..
T Consensus 318 ~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~ 381 (454)
T 1jl5_A 318 SLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED 381 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE
T ss_pred cCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh
Confidence 45 55555555553 5543 355555555555555 3444 234 5555555555555 45554443
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.5e-10 Score=108.50 Aligned_cols=84 Identities=15% Similarity=0.140 Sum_probs=58.7
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccc-cCccccCCCCCCEEEccCccccccCCCcccccc-cceeE
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGS-IPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~-iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~ 86 (408)
++++.|+|++|.+++..|. +..+++| .|+|++|++++. +|..+.++++|++|+|++|.+++..|..++.++ |+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6677777777777755543 5567777 777777777655 676777777777777777777777777777777 77777
Q ss_pred eecc-cccc
Q 037624 87 LSFN-DLSG 94 (408)
Q Consensus 87 l~~n-~l~g 94 (408)
+++| .+++
T Consensus 149 L~~~~~l~~ 157 (336)
T 2ast_B 149 LSGCSGFSE 157 (336)
T ss_dssp CTTCBSCCH
T ss_pred CCCCCCCCH
Confidence 7777 4554
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.5e-09 Score=106.45 Aligned_cols=84 Identities=30% Similarity=0.368 Sum_probs=71.5
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|+.|+|++|.+++ +|. +..+++| .|+|++|++++. |. ++.+++|+.|+|++|++++..| +..++ |+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 7788999999999999995 554 8889999 899999999954 43 8889999999999999997766 67888 99
Q ss_pred eeEeeccccccC
Q 037624 84 YLDLSFNDLSGG 95 (408)
Q Consensus 84 ~l~l~~n~l~g~ 95 (408)
.|++++|.+++.
T Consensus 335 ~L~l~~n~l~~~ 346 (466)
T 1o6v_A 335 RLFFYNNKVSDV 346 (466)
T ss_dssp EEECCSSCCCCC
T ss_pred EeECCCCccCCc
Confidence 999999998875
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.4e-09 Score=104.77 Aligned_cols=85 Identities=21% Similarity=0.253 Sum_probs=53.6
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|+.|+|++|++++ +| ++.+++| .|+|++|++++ + .++.+++|+.|+|++|++++ +| ++.++ |+
T Consensus 166 ~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~ 236 (457)
T 3bz5_A 166 VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLT 236 (457)
T ss_dssp CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSC-C--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCS
T ss_pred cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCe-e--ccccCCCCCEEECcCCcccc-cC--ccccCCCC
Confidence 4556666666666666663 44 5666666 66666666664 3 26666777777777777765 55 56666 77
Q ss_pred eeEeeccccccCCCcc
Q 037624 84 YLDLSFNDLSGGIPKH 99 (408)
Q Consensus 84 ~l~l~~n~l~g~~p~~ 99 (408)
.|++++|++++..+..
T Consensus 237 ~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 237 YFDCSVNPLTELDVST 252 (457)
T ss_dssp EEECCSSCCSCCCCTT
T ss_pred EEEeeCCcCCCcCHHH
Confidence 7777777776654433
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.90 E-value=7.5e-10 Score=112.10 Aligned_cols=81 Identities=31% Similarity=0.322 Sum_probs=37.4
Q ss_pred cCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEee
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLS 88 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~ 88 (408)
+|+.|+|++|+|+ .+| ..+++| .|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..++ |+.|+++
T Consensus 222 ~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 3444444444444 233 233444 4444444444 3443 3344555555555554 4444455555 5555555
Q ss_pred ccccccCCCccc
Q 037624 89 FNDLSGGIPKHL 100 (408)
Q Consensus 89 ~n~l~g~~p~~~ 100 (408)
+|++++..|..+
T Consensus 293 ~N~l~~~~~~~l 304 (622)
T 3g06_A 293 GNPLSERTLQAL 304 (622)
T ss_dssp SCCCCHHHHHHH
T ss_pred CCCCCCcCHHHH
Confidence 555554444433
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.5e-09 Score=97.93 Aligned_cols=109 Identities=14% Similarity=0.094 Sum_probs=71.5
Q ss_pred cccceeecccceeEEEEEEe-CCCcE--EEEEecccccCCCc---------------------chhhHHHHHHHHhc--c
Q 037624 174 FDIKYCFGTGGYGSVYIAQL-TSSKV--IALKKLHHWENEEP---------------------ASTRSFQNEVDILY--P 227 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~-~~g~~--vAvK~~~~~~~~~~---------------------~~~~~~~~E~~~l~--~ 227 (408)
|...+.||+|+||.||+|.. .+|+. ||||.++....... .....+.+|++.+. .
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56678999999999999998 78988 99998754211100 01136788998886 4
Q ss_pred cCC--cceeeeEeEeeecCCccchhhhhhcccch----hhhhh-------------------------------hccCcc
Q 037624 228 KYD--IETLLSFMDFVCIKDACFWFMNTWRGEAC----SVFCT-------------------------------MIMKPL 270 (408)
Q Consensus 228 ~~n--~~~l~~~~~~~~~~~~~~~lv~e~~~~~g----~l~~~-------------------------------l~~k~~ 270 (408)
|++ ++.++.+ ...++||||++.+| +|.+. -++||.
T Consensus 129 ~~~i~~p~~~~~--------~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~ 200 (258)
T 1zth_A 129 EAGVSVPQPYTY--------MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEY 200 (258)
T ss_dssp HTTCCCCCEEEE--------ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred hCCCCCCeEEEc--------CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 543 3443332 23456666662112 22211 127899
Q ss_pred ccccccCCceEEeecccccccC
Q 037624 271 SWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~ 292 (408)
|+++++ .++|+|||+|....
T Consensus 201 NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SEEESS--SEEECCCTTCEETT
T ss_pred HEEEcC--cEEEEECcccccCC
Confidence 999887 99999999998764
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.82 E-value=2.1e-09 Score=96.66 Aligned_cols=66 Identities=24% Similarity=0.182 Sum_probs=30.4
Q ss_pred ccccc-EEEcccccccc--ccCccccCCCCCCEEEccCccccccC-CCcccccccceeEeeccccccCCC
Q 037624 32 RLTSC-TLTLSNNKLSG--SIPSEIGNLQELSHLDSRHIFIKGTI-PYPLGVLPLSYLDLSFNDLSGGIP 97 (408)
Q Consensus 32 ~l~~L-~L~ls~N~l~g--~iP~~~~~l~~L~~l~l~~N~~~g~~-p~~~~~~~l~~l~l~~n~l~g~~p 97 (408)
++++| .|+||+|+|++ .+|..+..+++|+.|+|++|+|++.- -..+..+.|+.|+|++|++++..|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCccccC
Confidence 34455 55555555554 34444445555555555555554330 011111124555555555554443
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=98.82 E-value=5e-10 Score=107.14 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=79.1
Q ss_pred CCccccCCccCCeEeccCCccccCCC----hhhcccccc-EEEcccc---ccccccCccc-------cCCCCCCEEEccC
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIP----SSLGRLTSC-TLTLSNN---KLSGSIPSEI-------GNLQELSHLDSRH 66 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p----~~~~~l~~L-~L~ls~N---~l~g~iP~~~-------~~l~~L~~l~l~~ 66 (408)
++..+..+++|+.|+|++|++++..+ ..+..+++| .|+|++| +++|.+|..+ .++++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 56677888999999999999987644 446688999 9999985 6677888766 6889999999999
Q ss_pred ccccc----cCCCcccccc-cceeEeeccccccCCC
Q 037624 67 IFIKG----TIPYPLGVLP-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 67 N~~~g----~~p~~~~~~~-l~~l~l~~n~l~g~~p 97 (408)
|.+++ .+|..+..++ |+.|++++|.+++..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 99987 5788888888 9999999999874433
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.1e-10 Score=106.15 Aligned_cols=98 Identities=23% Similarity=0.207 Sum_probs=77.9
Q ss_pred CccccCCccCCeEeccCCccccCCC----hhhcccc-cc-EEEccccccccccCccccCC-----CCCCEEEccCccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIP----SSLGRLT-SC-TLTLSNNKLSGSIPSEIGNL-----QELSHLDSRHIFIKG 71 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p----~~~~~l~-~L-~L~ls~N~l~g~iP~~~~~l-----~~L~~l~l~~N~~~g 71 (408)
|..+...++|++|||++|.+++.-+ ..+..++ +| .|+|++|++++..|..+..+ ++|++|+|++|.+++
T Consensus 15 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 94 (362)
T 3goz_A 15 EEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSY 94 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCCh
Confidence 3344555669999999999996555 6778888 89 89999999997777777775 899999999999998
Q ss_pred cCCCccccc-----c-cceeEeeccccccCCCccc
Q 037624 72 TIPYPLGVL-----P-LSYLDLSFNDLSGGIPKHL 100 (408)
Q Consensus 72 ~~p~~~~~~-----~-l~~l~l~~n~l~g~~p~~~ 100 (408)
..+..+... + |+.|++++|.+++..+..+
T Consensus 95 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 129 (362)
T 3goz_A 95 KSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF 129 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred HHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH
Confidence 777755544 6 9999999999987655443
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=98.80 E-value=4.2e-10 Score=105.34 Aligned_cols=88 Identities=18% Similarity=0.215 Sum_probs=61.1
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEcccc-cccc-ccCccccCCCCCCEEEccCc-ccccc-CCCcc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNN-KLSG-SIPSEIGNLQELSHLDSRHI-FIKGT-IPYPL 77 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N-~l~g-~iP~~~~~l~~L~~l~l~~N-~~~g~-~p~~~ 77 (408)
|..+..+++|++|+|++|.+++.+|..++.+++| .|+|++| .+++ .+|..+.++++|++|+|++| .+++. +|..+
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 4456677777777777777777777777777777 7777777 5665 36666777777777777777 77653 45555
Q ss_pred cccc--cceeEeecc
Q 037624 78 GVLP--LSYLDLSFN 90 (408)
Q Consensus 78 ~~~~--l~~l~l~~n 90 (408)
..++ |+.|++++|
T Consensus 191 ~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 191 AHVSETITQLNLSGY 205 (336)
T ss_dssp HHSCTTCCEEECCSC
T ss_pred HhcccCCCEEEeCCC
Confidence 5554 677777776
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.71 E-value=3.1e-08 Score=100.23 Aligned_cols=88 Identities=25% Similarity=0.323 Sum_probs=56.7
Q ss_pred ccCCeEeccCCccccCCChhhcc-----------------cccc-EEEccccccccccCccccCCCCCCEEEccCccccc
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGR-----------------LTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKG 71 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~-----------------l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g 71 (408)
++|+.|+|++|++++ +|..+.+ +++| .|+|++|+|+ .+| ..+++|+.|+|++|+|+
T Consensus 181 ~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~- 254 (622)
T 3g06_A 181 SGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLT- 254 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-
T ss_pred CCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCC-
Confidence 666777777777763 4432211 1456 6777777777 366 34567777777777777
Q ss_pred cCCCcccccc-cceeEeeccccccCCCcccccccccc
Q 037624 72 TIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 72 ~~p~~~~~~~-l~~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
.+|. .++ |+.|++++|+++ .+|..+..+...+
T Consensus 255 ~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~ 287 (622)
T 3g06_A 255 SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSET 287 (622)
T ss_dssp CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTC
T ss_pred cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccC
Confidence 5665 445 888888888888 6677666554433
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.1e-08 Score=96.50 Aligned_cols=93 Identities=19% Similarity=0.101 Sum_probs=76.5
Q ss_pred CCc-cccCCccCCeEeccCCccccCCCh-hhcccccc--EEEccccccccccCccccCCCCCCEEEccCccccccCCCcc
Q 037624 2 IPL-EIGSLRNLVSLYLSGNNLTGSIPS-SLGRLTSC--TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPL 77 (408)
Q Consensus 2 ip~-~~~~l~~l~~L~l~~N~l~g~~p~-~~~~l~~L--~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~ 77 (408)
||+ .|.+|++|++|+|++|++.+.+|. .|.++++| .++++.|++++..|..+..+++|++|++++|++++..+..+
T Consensus 45 i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 45 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhh
Confidence 565 489999999999999999878876 57889988 48888999996667789999999999999999997666666
Q ss_pred cccc-cceeEeecc-cccc
Q 037624 78 GVLP-LSYLDLSFN-DLSG 94 (408)
Q Consensus 78 ~~~~-l~~l~l~~n-~l~g 94 (408)
.... +..++++++ .+..
T Consensus 125 ~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 125 IHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp CCBSSCEEEEEESCTTCCE
T ss_pred cccchhhhhhhcccccccc
Confidence 5555 888888764 4443
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.8e-09 Score=100.11 Aligned_cols=94 Identities=23% Similarity=0.189 Sum_probs=77.0
Q ss_pred ccccCCc-cCCeEeccCCccccCCChhhccc-----ccc-EEEccccccccccCccccC----C-CCCCEEEccCccccc
Q 037624 4 LEIGSLR-NLVSLYLSGNNLTGSIPSSLGRL-----TSC-TLTLSNNKLSGSIPSEIGN----L-QELSHLDSRHIFIKG 71 (408)
Q Consensus 4 ~~~~~l~-~l~~L~l~~N~l~g~~p~~~~~l-----~~L-~L~ls~N~l~g~iP~~~~~----l-~~L~~l~l~~N~~~g 71 (408)
..+..++ +|++|+|++|++++..+..+..+ ++| .|+|++|++++..|..++. + ++|++|+|++|.+++
T Consensus 44 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 44 QAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp HHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 3466788 89999999999998888888886 899 9999999999777765554 4 899999999999987
Q ss_pred cCCCcccc-----cc-cceeEeeccccccCCC
Q 037624 72 TIPYPLGV-----LP-LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 72 ~~p~~~~~-----~~-l~~l~l~~n~l~g~~p 97 (408)
..+..+.. .. |+.|++++|.++...+
T Consensus 124 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 124 KSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp SCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 76655443 24 9999999999986443
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.65 E-value=3.8e-09 Score=94.92 Aligned_cols=78 Identities=27% Similarity=0.294 Sum_probs=65.0
Q ss_pred cCCccCCeEeccCCcccc--CCChhhcccccc-EEEccccccccccCccccCCC--CCCEEEccCccccccCCC------
Q 037624 7 GSLRNLVSLYLSGNNLTG--SIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQ--ELSHLDSRHIFIKGTIPY------ 75 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g--~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~--~L~~l~l~~N~~~g~~p~------ 75 (408)
.++++|+.|+||+|+|++ .+|..+..+++| .|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 357899999999999998 677888999999 999999999954 4466665 999999999999998874
Q ss_pred -cccccc-cceeE
Q 037624 76 -PLGVLP-LSYLD 86 (408)
Q Consensus 76 -~~~~~~-l~~l~ 86 (408)
.+..++ |+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 245666 77765
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.49 E-value=3e-09 Score=103.96 Aligned_cols=91 Identities=19% Similarity=0.122 Sum_probs=67.3
Q ss_pred CCccCCeEeccCCccccC----CChhhcccccc-EEEccccccccccCccccC-----CCCCCEEEccCcccccc----C
Q 037624 8 SLRNLVSLYLSGNNLTGS----IPSSLGRLTSC-TLTLSNNKLSGSIPSEIGN-----LQELSHLDSRHIFIKGT----I 73 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~----~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~-----l~~L~~l~l~~N~~~g~----~ 73 (408)
.+++|+.|+|++|++++. +|..+..+++| .|+|++|.+++.-+..+.. .++|+.|+|++|.+++. +
T Consensus 254 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 333 (461)
T 1z7x_W 254 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 333 (461)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH
Confidence 578888999999888854 77778888888 8888888887554444443 26888888888888765 5
Q ss_pred CCcccccc-cceeEeeccccccCCCc
Q 037624 74 PYPLGVLP-LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 74 p~~~~~~~-l~~l~l~~n~l~g~~p~ 98 (408)
|..+..++ |+.|++++|.+++..+.
T Consensus 334 ~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 334 SSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HHHHhhCCCccEEEccCCccccccHH
Confidence 55666667 88888888877754433
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-08 Score=98.98 Aligned_cols=103 Identities=17% Similarity=0.100 Sum_probs=77.2
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhccc-----ccc-EEEccccccccc----cCccccCCCCCCEEEccCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRL-----TSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKG 71 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l-----~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g 71 (408)
+|..+.++++|+.|+|++|.+++.-+..+... ++| .|+|++|++++. +|..+..+++|++|+|++|.+++
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 34556778999999999999886555555443 688 899999998865 67777888999999999999887
Q ss_pred cCCCcccc-----cc-cceeEeecccccc----CCCccccccc
Q 037624 72 TIPYPLGV-----LP-LSYLDLSFNDLSG----GIPKHLTTKL 104 (408)
Q Consensus 72 ~~p~~~~~-----~~-l~~l~l~~n~l~g----~~p~~~~~~~ 104 (408)
..+..+.. .+ |+.|++++|.+++ .+|..+....
T Consensus 356 ~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~ 398 (461)
T 1z7x_W 356 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH 398 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCC
Confidence 65555543 45 8999999998885 5565554433
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.46 E-value=4.9e-08 Score=92.24 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=30.4
Q ss_pred cccceeecccceeEEEEEEeCCCcEEEEEeccc
Q 037624 174 FDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHH 206 (408)
Q Consensus 174 f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~ 206 (408)
|...+.||+|+||.||+|..++|+.||||.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~ 129 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL 129 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence 788899999999999999999999999998754
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.9e-08 Score=92.66 Aligned_cols=61 Identities=23% Similarity=0.238 Sum_probs=25.6
Q ss_pred ccCCeEeccCCcccc----CCChhhcccccc-EEEcccccccc----ccCccccCCCCCCEEEccCcccc
Q 037624 10 RNLVSLYLSGNNLTG----SIPSSLGRLTSC-TLTLSNNKLSG----SIPSEIGNLQELSHLDSRHIFIK 70 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g----~~p~~~~~l~~L-~L~ls~N~l~g----~iP~~~~~l~~L~~l~l~~N~~~ 70 (408)
++|+.|+|++|.|+. .++..+..+++| +|||++|+++. .++..+..+++|+.|+|++|.++
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 344444444444432 122333344444 44444444432 12333344444444444444443
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.22 E-value=7.7e-08 Score=97.01 Aligned_cols=86 Identities=20% Similarity=0.105 Sum_probs=42.1
Q ss_pred CccCCeEeccCC--ccccCCChhhcc-cccc-EEEcccccccc-ccCccccCCCCCCEEEccCcccccc-CCCcccccc-
Q 037624 9 LRNLVSLYLSGN--NLTGSIPSSLGR-LTSC-TLTLSNNKLSG-SIPSEIGNLQELSHLDSRHIFIKGT-IPYPLGVLP- 81 (408)
Q Consensus 9 l~~l~~L~l~~N--~l~g~~p~~~~~-l~~L-~L~ls~N~l~g-~iP~~~~~l~~L~~l~l~~N~~~g~-~p~~~~~~~- 81 (408)
+++|+.|+|++| .+++..+..++. +++| .|+|++|++++ .+|..+..+++|++|+|++|.+++. ++..+..++
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 445555555422 244333333333 4555 55555555554 3444445555566666666655433 223333445
Q ss_pred cceeEeecccccc
Q 037624 82 LSYLDLSFNDLSG 94 (408)
Q Consensus 82 l~~l~l~~n~l~g 94 (408)
|+.|++++|+++.
T Consensus 515 L~~L~ls~n~it~ 527 (592)
T 3ogk_B 515 LRYLWVQGYRASM 527 (592)
T ss_dssp CCEEEEESCBCCT
T ss_pred cCeeECcCCcCCH
Confidence 5566666665543
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.7e-07 Score=88.97 Aligned_cols=85 Identities=15% Similarity=0.110 Sum_probs=57.2
Q ss_pred ccCCeEeccCCccccCCChhh-cccccc-EEEccccccccccCccc-----cCCCCCCEEEccCccccc----cCCCccc
Q 037624 10 RNLVSLYLSGNNLTGSIPSSL-GRLTSC-TLTLSNNKLSGSIPSEI-----GNLQELSHLDSRHIFIKG----TIPYPLG 78 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~-~~l~~L-~L~ls~N~l~g~iP~~~-----~~l~~L~~l~l~~N~~~g----~~p~~~~ 78 (408)
++|+.|+|++|.++..-...+ ..+++| .|+|++|+|+..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 688888888888874433333 346677 78888888874433333 245778888888888864 2444445
Q ss_pred ccc-cceeEeecccccc
Q 037624 79 VLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g 94 (408)
..+ |++|+|++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp TCSSCCEEECTTSSCHH
T ss_pred cCCCcCEEeCCCCCCCc
Confidence 566 8888888888764
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.2e-07 Score=79.11 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=69.5
Q ss_pred ccCCccCCeEeccCC-cccc----CCChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCcccccc---
Q 037624 6 IGSLRNLVSLYLSGN-NLTG----SIPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKGT--- 72 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N-~l~g----~~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g~--- 72 (408)
+...++|+.|+|++| .++. .+...+...+.| +|+|++|+++.. +...+...++|++|+|++|.++..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 566789999999999 8873 245566777889 999999998732 445566678999999999999753
Q ss_pred -CCCcccccc-cceeEe--eccccccC
Q 037624 73 -IPYPLGVLP-LSYLDL--SFNDLSGG 95 (408)
Q Consensus 73 -~p~~~~~~~-l~~l~l--~~n~l~g~ 95 (408)
+...+...+ |+.|++ ++|.+...
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 455667677 999999 78888743
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.09 E-value=6e-07 Score=76.32 Aligned_cols=88 Identities=15% Similarity=0.165 Sum_probs=62.4
Q ss_pred ccCCccCCeEeccCCcccc----CCChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEc--cCcccccc--
Q 037624 6 IGSLRNLVSLYLSGNNLTG----SIPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDS--RHIFIKGT-- 72 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g----~~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l--~~N~~~g~-- 72 (408)
+...++|++|+|++|.++. .+...+...+.| +|+|++|+++.. +...+...++|++|+| ++|.++..
T Consensus 61 L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~ 140 (185)
T 1io0_A 61 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE 140 (185)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred HHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHH
Confidence 4556788888888888863 244455666778 888888888743 5566777788888888 77888654
Q ss_pred --CCCcccccc-cceeEeeccccc
Q 037624 73 --IPYPLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 73 --~p~~~~~~~-l~~l~l~~n~l~ 93 (408)
+...+...+ |+.|++++|.+.
T Consensus 141 ~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 141 MEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCcCEEeccCCCCC
Confidence 333344446 888888888765
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=97.99 E-value=9.8e-07 Score=88.90 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=62.5
Q ss_pred cCCccCCeEeccCCccccC----CChhhcccccc-EEEccccccc----cccCccccCCCCCCEEEccCccccccCCCcc
Q 037624 7 GSLRNLVSLYLSGNNLTGS----IPSSLGRLTSC-TLTLSNNKLS----GSIPSEIGNLQELSHLDSRHIFIKGTIPYPL 77 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g~----~p~~~~~l~~L-~L~ls~N~l~----g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~ 77 (408)
.++++|++|+|++|.+++. ++..+..+++| .|+|++|.++ +.+|..+.++++|+.|+|++|.+.+ +|..+
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 3578888888888888765 44455677888 8888888886 4566666778888888888888875 66677
Q ss_pred cccc-cceeEeecc
Q 037624 78 GVLP-LSYLDLSFN 90 (408)
Q Consensus 78 ~~~~-l~~l~l~~n 90 (408)
..++ |+.|+++.+
T Consensus 240 ~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 240 KAAANLEEFCGGSL 253 (592)
T ss_dssp HHCTTCCEEEECBC
T ss_pred hhhhHHHhhccccc
Confidence 7777 888887753
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=74.75 Aligned_cols=93 Identities=20% Similarity=0.194 Sum_probs=78.2
Q ss_pred CccCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCc-cccCCCCCC-EEEccCccccccCCCcccccc-cc
Q 037624 9 LRNLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELS-HLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~-~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
+++|+.|+|++|+++ .||. .|.+|++| .|+|++| ++ .||+ .|.+|++|+ .|+|++ +++..-+..|..++ |+
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 789999999999999 6665 58899999 9999998 77 5665 788999999 999998 77755568899999 99
Q ss_pred eeEeeccccccCCCcccccccc
Q 037624 84 YLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 84 ~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
.++++.|+++..-+..|..+.+
T Consensus 301 ~l~l~~n~i~~I~~~aF~~~~~ 322 (329)
T 3sb4_A 301 YVLATGDKITTLGDELFGNGVP 322 (329)
T ss_dssp EEEECSSCCCEECTTTTCTTCC
T ss_pred EEEeCCCccCccchhhhcCCcc
Confidence 9999999998666666665543
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.88 E-value=8.8e-07 Score=89.24 Aligned_cols=85 Identities=16% Similarity=0.111 Sum_probs=56.0
Q ss_pred CCccCCeEecc--C----CccccCCC------hhhcccccc-EEEccccccccccCccccC-CCCCCEEEccCccccccC
Q 037624 8 SLRNLVSLYLS--G----NNLTGSIP------SSLGRLTSC-TLTLSNNKLSGSIPSEIGN-LQELSHLDSRHIFIKGTI 73 (408)
Q Consensus 8 ~l~~l~~L~l~--~----N~l~g~~p------~~~~~l~~L-~L~ls~N~l~g~iP~~~~~-l~~L~~l~l~~N~~~g~~ 73 (408)
++++|+.|+|+ + |+++ ..| .-+..+++| .|+|++ ++++..+..++. +++|+.|+|++|.+++..
T Consensus 395 ~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 395 NRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp HCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred hCCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHH
Confidence 46778888887 4 5555 222 225667777 788866 666555556665 777888888888776654
Q ss_pred CCcc-cccc-cceeEeecccccc
Q 037624 74 PYPL-GVLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 74 p~~~-~~~~-l~~l~l~~n~l~g 94 (408)
+..+ ..++ |+.|++++|.+++
T Consensus 473 ~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 473 MHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHhcCCCcCEEECcCCCCcH
Confidence 4444 4466 7788888877743
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0001 Score=68.32 Aligned_cols=49 Identities=16% Similarity=0.104 Sum_probs=32.3
Q ss_pred CCCCCEEEccCccccccCCCcccccc-cceeEeeccccccCCCcccccccc
Q 037624 56 LQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 56 l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
|++|+.|+|++|+++..-+..|..+. |+.+++.+| +...-+..|..+..
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~ 274 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGR 274 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChh
Confidence 67788888888888744445677777 888888777 55333444544443
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.63 E-value=1.1e-05 Score=81.15 Aligned_cols=84 Identities=19% Similarity=0.143 Sum_probs=58.6
Q ss_pred CCccCCeEeccCCccccCCChhhc-ccccc-EEEcccc-ccccc-cCccccCCCCCCEEEccCccccccCCCccc----c
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSLG-RLTSC-TLTLSNN-KLSGS-IPSEIGNLQELSHLDSRHIFIKGTIPYPLG----V 79 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~~-~l~~L-~L~ls~N-~l~g~-iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~----~ 79 (408)
.+++|+.|+|++|.+++..+..+. .+++| .|+|++| .++.. +|..+.++++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 466788888888888777776665 57888 7888887 45432 555555788888888888887665443332 4
Q ss_pred cc-cceeEeeccc
Q 037624 80 LP-LSYLDLSFND 91 (408)
Q Consensus 80 ~~-l~~l~l~~n~ 91 (408)
++ |+.|++++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 55 7788887775
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.60 E-value=1.7e-05 Score=74.66 Aligned_cols=87 Identities=20% Similarity=0.168 Sum_probs=60.5
Q ss_pred CccCCeEeccCCccccCCChhhc--ccccc-EEEccc--cccccc-----cCccc--cCCCCCCEEEccCccccccCCCc
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLG--RLTSC-TLTLSN--NKLSGS-----IPSEI--GNLQELSHLDSRHIFIKGTIPYP 76 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~--~l~~L-~L~ls~--N~l~g~-----iP~~~--~~l~~L~~l~l~~N~~~g~~p~~ 76 (408)
+++|+.|+|+.|.++......++ .+++| .|+|+. |...|. +-..+ ..+++|+.|+|++|.++...+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 78999999998887654444454 68889 888863 332222 11122 35789999999999987654433
Q ss_pred cc---ccc-cceeEeeccccccC
Q 037624 77 LG---VLP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 77 ~~---~~~-l~~l~l~~n~l~g~ 95 (408)
+. .++ |+.|+|+.|.++..
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHH
T ss_pred HHhCccCCCCCEEECCCCCCChH
Confidence 33 567 99999999988763
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.31 E-value=4.6e-05 Score=63.49 Aligned_cols=90 Identities=11% Similarity=0.062 Sum_probs=60.6
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccc-cccccCccccCC----CCCCEEEccCcc-ccccCC
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNK-LSGSIPSEIGNL----QELSHLDSRHIF-IKGTIP 74 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~-l~g~iP~~~~~l----~~L~~l~l~~N~-~~g~~p 74 (408)
+|...-.--+|+.||||++.++..=-..+..|++| .|+|+++. +|..-=..++.+ ++|+.|+|+++. +|..=-
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45543223468999999998874433457788999 89999985 663211234543 479999999974 654322
Q ss_pred Ccccccc-cceeEeeccc
Q 037624 75 YPLGVLP-LSYLDLSFND 91 (408)
Q Consensus 75 ~~~~~~~-l~~l~l~~n~ 91 (408)
..+..++ |+.|+++++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 3466778 9999998875
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.28 E-value=2.5e-05 Score=73.52 Aligned_cols=87 Identities=16% Similarity=0.197 Sum_probs=64.5
Q ss_pred CCccCCeEeccC--CccccC-----CChhh--cccccc-EEEccccccccccCcccc---CCCCCCEEEccCcccccc--
Q 037624 8 SLRNLVSLYLSG--NNLTGS-----IPSSL--GRLTSC-TLTLSNNKLSGSIPSEIG---NLQELSHLDSRHIFIKGT-- 72 (408)
Q Consensus 8 ~l~~l~~L~l~~--N~l~g~-----~p~~~--~~l~~L-~L~ls~N~l~g~iP~~~~---~l~~L~~l~l~~N~~~g~-- 72 (408)
.+++|+.|+|+. |...|. +...+ ..+++| .|+|++|.++...+..+. .+++|++|||+.|.+++.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 789999999964 332222 11122 357899 999999999865555444 588999999999999873
Q ss_pred --CCCcccccc-cceeEeecccccc
Q 037624 73 --IPYPLGVLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 73 --~p~~~~~~~-l~~l~l~~n~l~g 94 (408)
++..+..++ |+.|++++|.++.
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHhhcccCCcceEEECCCCcCCH
Confidence 556666778 9999999998764
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00038 Score=55.10 Aligned_cols=55 Identities=20% Similarity=0.206 Sum_probs=29.6
Q ss_pred EEEccccccc-cccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEeeccccc
Q 037624 37 TLTLSNNKLS-GSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 37 ~L~ls~N~l~-g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~ 93 (408)
.++.++|+|+ ..+|..+. ++|+.|+|++|+|+...+..+..++ |+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 34554332 2456666666666643334445555 666666666554
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00033 Score=55.41 Aligned_cols=55 Identities=20% Similarity=0.284 Sum_probs=45.2
Q ss_pred CeEeccCCccc-cCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCcccc
Q 037624 13 VSLYLSGNNLT-GSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIK 70 (408)
Q Consensus 13 ~~L~l~~N~l~-g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~ 70 (408)
..++.++++|+ ..+|..+. ++| .|+|++|+|+ .||. .|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 58899999997 56885432 358 9999999999 6666 5678999999999999885
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=62.71 Aligned_cols=86 Identities=7% Similarity=0.031 Sum_probs=48.9
Q ss_pred ccCCccCCeEeccCCccc-----cCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCccc
Q 037624 6 IGSLRNLVSLYLSGNNLT-----GSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~-----g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
|.++++|+.++|.+|.++ -.-+..|.+|++| .++|. |+++ .|+. .|.+|++|+.++|..| ++..-+.+|.
T Consensus 267 F~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~ 343 (401)
T 4fdw_A 267 FYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFN 343 (401)
T ss_dssp TTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSS
T ss_pred hhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCC
Confidence 455666666666666554 1123355666666 66666 3355 4443 5566677777777444 4423334455
Q ss_pred ccccceeEeecccccc
Q 037624 79 VLPLSYLDLSFNDLSG 94 (408)
Q Consensus 79 ~~~l~~l~l~~n~l~g 94 (408)
++.|+.+++++|.+.-
T Consensus 344 ~~~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 344 NTGIKEVKVEGTTPPQ 359 (401)
T ss_dssp SSCCCEEEECCSSCCB
T ss_pred CCCCCEEEEcCCCCcc
Confidence 5557777777765543
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00065 Score=60.22 Aligned_cols=79 Identities=11% Similarity=0.039 Sum_probs=51.2
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---cc-CCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PK-YDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~-~n~~~l~~~~~~~~~~~~~ 247 (408)
.++....+.+.|..+.||++...+|+.+++|..... ....+.+|++++. .+ ..+++++.+ ...++.
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~----~~~~~~ 89 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDV----VTEAGR 89 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEE----EECSSC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEe----ccCCCC
Confidence 345443333456669999998877888999997542 1345778888775 22 124556665 444555
Q ss_pred chhhhhhcccchhh
Q 037624 248 FWFMNTWRGEACSV 261 (408)
Q Consensus 248 ~~lv~e~~~~~g~l 261 (408)
.++++||+ ++.++
T Consensus 90 ~~~v~e~i-~G~~l 102 (264)
T 1nd4_A 90 DWLLLGEV-PGQDL 102 (264)
T ss_dssp EEEEEECC-SSEET
T ss_pred CEEEEEec-CCccc
Confidence 67888887 66555
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0095 Score=52.79 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=65.7
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC 242 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~ 242 (408)
.+...-++|.....++.|+.+.||++... ++.+++|........ ....+.+|++++. .+..+++++.+ +
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~----~ 79 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHF----E 79 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEE----E
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEE----E
Confidence 34455567887888898999999999864 678999998642211 1345888888885 45566777777 5
Q ss_pred cCCccchhhhhhcccchhhhhh
Q 037624 243 IKDACFWFMNTWRGEACSVFCT 264 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~ 264 (408)
...+..+++|||+ ++.++...
T Consensus 80 ~~~~~~~lv~e~i-~G~~l~~~ 100 (263)
T 3tm0_A 80 RHDGWSNLLMSEA-DGVLCSEE 100 (263)
T ss_dssp EETTEEEEEEECC-SSEEHHHH
T ss_pred ecCCceEEEEEec-CCeehhhc
Confidence 5667788999999 88887664
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0014 Score=55.60 Aligned_cols=84 Identities=13% Similarity=0.113 Sum_probs=59.3
Q ss_pred cCCccCCeEeccCC-cccc----CCChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCcccccc----
Q 037624 7 GSLRNLVSLYLSGN-NLTG----SIPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKGT---- 72 (408)
Q Consensus 7 ~~l~~l~~L~l~~N-~l~g----~~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g~---- 72 (408)
.+-++|+.|+|++| ++.. .|-..+..-+.| .|+|++|++.-. |-..+..-+.|+.|+|++|.|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34578999999986 7652 244456666788 899999999722 223344567899999999999743
Q ss_pred CCCcccccc-cceeEeecc
Q 037624 73 IPYPLGVLP-LSYLDLSFN 90 (408)
Q Consensus 73 ~p~~~~~~~-l~~l~l~~n 90 (408)
+-..+..-. |+.|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 223344445 999999865
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.013 Score=55.66 Aligned_cols=84 Identities=12% Similarity=0.167 Sum_probs=66.2
Q ss_pred cccCCccCCeEeccCCccccCCC-hhhcccccc-EEEccccccccccC-ccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSC-TLTLSNNKLSGSIP-SEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p-~~~~~l~~L-~L~ls~N~l~g~iP-~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
.|.++++|+.++|. |+++ .|+ ..|.+|++| .++|..| ++ .|+ ..|.+| +|+.+++++|.+.-..+..+..++
T Consensus 295 aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 295 CLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp TTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred HhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 47789999999999 5577 554 568889999 9999665 77 554 478889 999999999998866666677775
Q ss_pred --cceeEeeccccc
Q 037624 82 --LSYLDLSFNDLS 93 (408)
Q Consensus 82 --l~~l~l~~n~l~ 93 (408)
++.|++..|.+.
T Consensus 370 ~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 370 DDITVIRVPAESVE 383 (401)
T ss_dssp TTCCEEEECGGGHH
T ss_pred CCccEEEeCHHHHH
Confidence 788888777644
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.51 E-value=0.0035 Score=53.13 Aligned_cols=86 Identities=10% Similarity=0.138 Sum_probs=58.3
Q ss_pred ccCCccCCeEeccCCcccc----CCChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCc---ccccc-
Q 037624 6 IGSLRNLVSLYLSGNNLTG----SIPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHI---FIKGT- 72 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g----~~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N---~~~g~- 72 (408)
+..-++|+.|+|++|++.. .|-..+..-+.| .|+|+.|+|+.. |-..+..-+.|+.|+|++| .+...
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 4455789999999999983 244455566789 999999999833 2233455567999999975 33321
Q ss_pred ---CCCcccccc-cceeEeeccc
Q 037624 73 ---IPYPLGVLP-LSYLDLSFND 91 (408)
Q Consensus 73 ---~p~~~~~~~-l~~l~l~~n~ 91 (408)
+...+..-+ |+.|+++.|.
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHhCCCcCeEeccCCC
Confidence 333344445 8888887664
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.0052 Score=51.04 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=46.9
Q ss_pred cccCCccCCeEeccCCc-cccCCChhhccc----ccc-EEEccccc-cccccCccccCCCCCCEEEccCcc
Q 037624 5 EIGSLRNLVSLYLSGNN-LTGSIPSSLGRL----TSC-TLTLSNNK-LSGSIPSEIGNLQELSHLDSRHIF 68 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~-l~g~~p~~~~~l----~~L-~L~ls~N~-l~g~iP~~~~~l~~L~~l~l~~N~ 68 (408)
.+..+++|+.|+|+++. ++..-=..++.+ ++| .|+|+++. +|-.==..+.+|++|+.|+|+++.
T Consensus 80 ~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 80 HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 36789999999999985 663322345553 479 99999985 772211357889999999999975
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.057 Score=50.25 Aligned_cols=78 Identities=6% Similarity=0.149 Sum_probs=48.2
Q ss_pred cceeecccceeEEEEEEeCCCcEEEEEecc--cccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeeecCC---c
Q 037624 176 IKYCFGTGGYGSVYIAQLTSSKVIALKKLH--HWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVCIKD---A 246 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~--~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~~~---~ 246 (408)
..+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|.+++. .+..+++++.+ +.+. +
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~----~~~~~~~g 114 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYAL----CEDESVIG 114 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEE----ECCTTTTS
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEE----CCCCCccC
Confidence 35678999999999998865 567888875 32111 12346778888875 24456777776 5544 3
Q ss_pred cchhhhhhcccchhh
Q 037624 247 CFWFMNTWRGEACSV 261 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l 261 (408)
..+++|||+ ++..+
T Consensus 115 ~~~~vme~v-~G~~l 128 (359)
T 3dxp_A 115 RAFYIMEFV-SGRVL 128 (359)
T ss_dssp SCEEEEECC-CCBCC
T ss_pred CeEEEEEec-CCeec
Confidence 467788887 55444
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.82 E-value=0.1 Score=49.21 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=44.3
Q ss_pred ccCCccCCeEeccCCccccCCC-hhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p-~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
+..+.+|+.+.+.+| ++ .|+ .+|.+|++| .++|..+ ++ .|+. +|.+|.+|+.+++..| ++-.-..++..+.
T Consensus 293 F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 344556666666543 44 333 345666666 6666533 55 4443 5666677777776655 4422234555655
Q ss_pred cceeEeecc
Q 037624 82 LSYLDLSFN 90 (408)
Q Consensus 82 l~~l~l~~n 90 (408)
|+.+++..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 666666544
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=93.38 E-value=0.07 Score=50.35 Aligned_cols=82 Identities=13% Similarity=0.238 Sum_probs=62.1
Q ss_pred ccCCccCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCC-Ccccccc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIP-YPLGVLP 81 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p-~~~~~~~ 81 (408)
+.++++|+.+.+. +.++ .|+. .|.+|.+| .++|..| ++ .|++ +|.+|.+|+.+.|..+ ++ .|+ .+|.++.
T Consensus 284 F~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~ 357 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCT 357 (394)
T ss_dssp TTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCT
T ss_pred cccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCC
Confidence 5678899999996 4566 4554 57889999 8999865 66 5554 7888999999999755 65 454 4677888
Q ss_pred -cceeEeeccccc
Q 037624 82 -LSYLDLSFNDLS 93 (408)
Q Consensus 82 -l~~l~l~~n~l~ 93 (408)
|+.+++.+|...
T Consensus 358 ~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 358 ALNNIEYSGSRSQ 370 (394)
T ss_dssp TCCEEEESSCHHH
T ss_pred CCCEEEECCceee
Confidence 999999887543
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=92.71 E-value=0.2 Score=47.15 Aligned_cols=97 Identities=9% Similarity=0.095 Sum_probs=67.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
.|.++.+|+.+.+.++..+ .-...+.+|+.| .+++. +.++ .||. .|.+|.+|+.++|..| ++-.-..+|..+.
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 3567889999999876654 334568889999 89996 5566 6666 6788999999999865 5533345778888
Q ss_pred cceeEeeccccccCCCccccccccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLTTKLRR 106 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~~~~~~ 106 (408)
|+.+.+..+ ++.--...|..+...
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCC
Confidence 999998654 442223345444433
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=92.71 E-value=0.18 Score=47.12 Aligned_cols=81 Identities=20% Similarity=0.172 Sum_probs=50.7
Q ss_pred ccCCccCCeEeccCCccccCC-Chhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 6 IGSLRNLVSLYLSGNNLTGSI-PSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~-p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
+.++.+|+.+.+..+ ++ .| ...+.++.+| .+++..+ ++ .++. .+.+|++|+.+++.+|.++-.-+..+.+..
T Consensus 236 f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred ccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCC
Confidence 455677888777665 44 33 3355667777 6777544 44 4444 566777777777777777633345566666
Q ss_pred cceeEeecc
Q 037624 82 LSYLDLSFN 90 (408)
Q Consensus 82 l~~l~l~~n 90 (408)
|+.+++..+
T Consensus 312 L~~i~lp~~ 320 (379)
T 4h09_A 312 LSSVTLPTA 320 (379)
T ss_dssp CCEEECCTT
T ss_pred CCEEEcCcc
Confidence 777777543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=91.87 E-value=0.17 Score=47.57 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=54.7
Q ss_pred cccCCccCCeEeccCCccccCCC-hhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p-~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
.|.++++|+.++|.++ ++ .|+ .+|.+|++| .++|..| ++ .|+. +|.+|++|+.+++..| ++ .+...+.+..
T Consensus 315 aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~ 388 (394)
T 4fs7_A 315 AFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTT 388 (394)
T ss_dssp TTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTC
T ss_pred hhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC-CE-EhhheecCCC
Confidence 3678899999999754 76 564 578899999 9999877 77 6655 7889999999999865 32 3334455544
Q ss_pred -cce
Q 037624 82 -LSY 84 (408)
Q Consensus 82 -l~~ 84 (408)
|+.
T Consensus 389 ~L~~ 392 (394)
T 4fs7_A 389 KFKW 392 (394)
T ss_dssp EEEE
T ss_pred CCcE
Confidence 443
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=91.82 E-value=0.11 Score=47.00 Aligned_cols=41 Identities=24% Similarity=0.217 Sum_probs=29.4
Q ss_pred ceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc
Q 037624 177 KYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY 226 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~ 226 (408)
.+.++.|....||+.. ..+++|..... .....+.+|.+++.
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~ 65 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILK 65 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHH
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHH
Confidence 3568999999999863 45788886431 23467888998874
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=89.87 E-value=0.65 Score=43.22 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=58.7
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
+....+|+.+.+..+ +.-.-...+..+..| .+.+..| ++ .|+. .+.++.+|+.+++..+ ++..-...+..+. |
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccc
Confidence 445667777777655 331334456778888 7888765 55 4443 5677888888888654 4423334566667 8
Q ss_pred ceeEeeccccccCCCcccccc
Q 037624 83 SYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+.+++.++.++..-+..|...
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c 309 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDC 309 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTC
T ss_pred ccccccccccceehhhhhcCC
Confidence 888887776653333444443
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=88.11 E-value=0.72 Score=41.14 Aligned_cols=51 Identities=20% Similarity=0.109 Sum_probs=38.6
Q ss_pred hcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY 226 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~ 226 (408)
.......+|.|..+.||+.++.||+.|.||+-.... ......|.+|.+.|.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~---~~~~~~~~~Ea~~L~ 66 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA---PALDGLFRAEALGLD 66 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC---CCCTTHHHHHHHHHH
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC---cchhhHHHHHHHHHH
Confidence 344567789999999999999999999999865321 223456888988775
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=87.72 E-value=1.3 Score=38.83 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=51.0
Q ss_pred Hhhcccceeeccccee-EEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 171 TEDFDIKYCFGTGGYG-SVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G-~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
..+|.. ..+..|..| .||+.... ++..+.+|+-.. .....+.+|...|. .+.-+++++.+ +...
T Consensus 24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~----~~~~ 92 (272)
T 4gkh_A 24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHF----IRTP 92 (272)
T ss_dssp HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEE----EEET
T ss_pred ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEE----EEEC
Confidence 334443 234556555 69998774 456788887543 23456788888875 44446677777 6666
Q ss_pred ccchhhhhhcccchhh
Q 037624 246 ACFWFMNTWRGEACSV 261 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l 261 (408)
+..+++|+++ ++.++
T Consensus 93 ~~~~lvme~l-~G~~~ 107 (272)
T 4gkh_A 93 DDAWLLTTAI-PGKTA 107 (272)
T ss_dssp TEEEEEEECC-CSEEH
T ss_pred CeEEEEEEee-CCccc
Confidence 7778888888 65444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 408 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 7e-15 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-13 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-13 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-13 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-13 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-13 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-13 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 8e-13 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-12 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-12 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-12 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 9e-12 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-11 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-11 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-11 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-11 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-11 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-11 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 6e-11 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-10 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-10 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-10 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-10 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-10 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-10 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 5e-10 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-10 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 8e-10 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-09 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-09 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-09 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-09 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-08 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-04 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-09 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-09 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 7e-09 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-08 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-08 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-08 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 4e-08 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 5e-08 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-08 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 7e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-04 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-07 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-05 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-07 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 7e-07 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-06 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-06 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-06 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-06 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-06 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-06 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-06 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 7e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 9e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-05 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-05 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-05 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-05 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 6e-05 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-04 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-04 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.003 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.004 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.9 bits (176), Expect = 7e-15
Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 58/259 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL------ 225
+ G+G +G+VY + +A+K L+ P ++F+NEV +L
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNV-TAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 226 -----YPKYDIETLLSFMDFVC----------------IKDACFWFMNTWRGEACSVFCT 264
L + + T +G +
Sbjct: 65 NILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 265 MI---MKPLSWIGLRELEAFVADFGM--TMHLYCDSSNLTLLAGTYGY------------ 307
+I +K + +L + DFG+ + S L+G+ +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 308 ---EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364
+ DVY+FG+V E++ G+ P S+ ++++ ++ V LSP + ++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 365 RDIVLVSTILFACLRSNPK 383
+ ++ CL+
Sbjct: 237 NCPKAMKRLMAECLKKKRD 255
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (167), Expect = 1e-13
Identities = 37/256 (14%), Positives = 72/256 (28%), Gaps = 60/256 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDI------- 224
E ++ G G +G V++ + +A+K L S +F E +
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHE 72
Query: 225 ----LYPKYDIETLLSFMDFV---CIKDACFWFMNTWRGEACSVF----CTMIMKPLSWI 273
LY E + +++ + D + V M + +
Sbjct: 73 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 132
Query: 274 GL-------------RELEAFVADFGMTMHLYCD-SSNLTLLAGTYGY------------ 307
L VADFG+ + + + +
Sbjct: 133 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 192
Query: 308 EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367
K DV+SFG++ E+ + N +LD ++ P +
Sbjct: 193 IKSDVWSFGILLTELTTKGRV---------PYPGMVNREVLDQVERGYRMPCPPECPESL 243
Query: 368 VLVSTILFACLRSNPK 383
++ C R P+
Sbjct: 244 H---DLMCQCWRKEPE 256
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.0 bits (168), Expect = 1e-13
Identities = 50/284 (17%), Positives = 88/284 (30%), Gaps = 66/284 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
EDF + G G +G V++A+ + + A+K L E +L ++
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 231 IETLLSFMDFVCIKDACFWFMNTWRG----------------EACSVFCTMI-------- 266
L K+ F+ M G A +I
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121
Query: 267 -------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------ 307
+K + + ++ +ADFGM + GT Y
Sbjct: 122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYN 181
Query: 308 EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367
D +SFGV+ E+L+G+ P ++ + +D P +D+
Sbjct: 182 HSVDWWSFGVLLYEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDL 233
Query: 368 VLVSTILFACLRSNPKT-------PMQKP-FHEISISELRNQEM 403
++ P+ Q P F EI+ EL +E+
Sbjct: 234 LV------KLFVREPEKRLGVRGDIRQHPLFREINWEELERKEI 271
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.3 bits (164), Expect = 2e-13
Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 59/255 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDI------ 224
EDF+I G G +G+VY+A+ S ++ALK L + E+ + EV+I
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 225 -----LYPKYDIETLLSFMDFVCIKDACFWFMNTWRG----EACSVFCTMI--------- 266
LY + T + + + + + +
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125
Query: 267 ------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
+KP + + E +ADFG ++H SS T L GT Y E
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGRMHDE 183
Query: 309 KCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIV 368
K D++S GV+ E L+G+ P ++ + + I ++ P RD++
Sbjct: 184 KVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE----GARDLI 235
Query: 369 LVSTILFACLRSNPK 383
L+ NP
Sbjct: 236 S------RLLKHNPS 244
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.5 bits (164), Expect = 3e-13
Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 79/285 (27%)
Query: 162 FVFGDIIEATEDFD---------IKYCFGTGGYGSVYIAQLTSSK----VIALKKLHHWE 208
F F D EA +F I+ G G +G V L +A+K L
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 209 NEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMK 268
E+ R F +E I+ ++D ++ V + F
Sbjct: 67 TEK--QRRDFLSEASIMG-QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG 123
Query: 269 PLSWIGLR--------------------------------ELEAFVADFGMTMHLYCDSS 296
+ I L L V+DFG++ L D+S
Sbjct: 124 QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183
Query: 297 NLTLLA-----GTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSS 339
+ T + + DV+S+G+V E++ +
Sbjct: 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER-------PYWD 236
Query: 340 SSDQNIMLLDVLDPRLSPPVDRM-VVRDIVLVSTILFACLRSNPK 383
++Q+++ D RL PP+D + ++L C + +
Sbjct: 237 MTNQDVINAIEQDYRLPPPMDCPSALHQLML------DCWQKDRN 275
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.0 bits (163), Expect = 3e-13
Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 60/256 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL------ 225
+ G+G +G V++ + +A+K + E S F E +++
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHP 60
Query: 226 ---------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWIGLR 276
+ I + FM+ C+ D + E C + + ++++
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 277 ----------------ELEAFVADFGMTMHLYCDSSNLTL-LAGTYGY------------ 307
V+DFGMT + D + +
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 308 EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367
K DV+SFGV+ E+ + + N +++ + R+ +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKI---------PYENRSNSEVVEDISTGFRLYKPRLASTHV 231
Query: 368 VLVSTILFACLRSNPK 383
I+ C + P+
Sbjct: 232 Y---QIMNHCWKERPE 244
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.4 bits (164), Expect = 4e-13
Identities = 38/204 (18%), Positives = 65/204 (31%), Gaps = 50/204 (24%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPK 228
+DF+ G G G V+ S V+A K +H +PA E+ +L+ +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL--EIKPAIRNQIIRELQVLH-E 60
Query: 229 YDIETLLSFMDFVCIKDACFWFMNTWRG----------------EACSVFCTMI------ 266
+ ++ F M G V +I
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 267 ----------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY--------- 307
+KP + + E + DFG++ L S GT Y
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 178
Query: 308 ---EKCDVYSFGVVALEILMGRQP 328
+ D++S G+ +E+ +GR P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.9 bits (160), Expect = 8e-13
Identities = 36/258 (13%), Positives = 70/258 (27%), Gaps = 64/258 (24%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDI 231
+D GTG +G V + +A+K + E S F E ++
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMM-NLSH 58
Query: 232 ETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWIGL---------------- 275
E L+ + F + + L
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 276 ----------------RELEAFVADFGMTMHLYCDSSNLTL-LAGTYGY----------- 307
+ V+DFG++ ++ D ++ +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 308 -EKCDVYSFGVVALEIL-MGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365
K D+++FGV+ EI +G+ P E N + + L +
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYE----------RFTNSETAEHIAQGLRLYRPHLASE 228
Query: 366 DIVLVSTILFACLRSNPK 383
+ TI+++C
Sbjct: 229 KVY---TIMYSCWHEKAD 243
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.0 bits (158), Expect = 2e-12
Identities = 33/256 (12%), Positives = 85/256 (33%), Gaps = 58/256 (22%)
Query: 171 TEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKY 229
+ + G G G+VY A ++ + +A+++++ + + NE+ ++ +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMR-EN 74
Query: 230 DIETLLSFMDFVCIKDACFWFMNTWRG---------------EACSVFCTMI-------- 266
+++++D + D + M G + +V +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 267 -------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------ 307
+K + + + + DFG + + S + + GT +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 308 EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDI 367
K D++S G++A+E++ G P + + + L + +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP--------YLNENPLRALYLIATNGTPELQNPEKLSAIF 246
Query: 368 VLVSTILFACLRSNPK 383
L CL + +
Sbjct: 247 R---DFLNRCLDMDVE 259
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.7 bits (157), Expect = 2e-12
Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 64/258 (24%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDI 231
E + G G +G V++ +A+K L + S +F E +++ +
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMK-QLQH 67
Query: 232 ETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWIGLREL------------- 278
+ L+ V + G T L+ L ++
Sbjct: 68 QRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 279 -------------------EAFVADFGMTMHLYCDSSNL-TLLAGTYGY----------- 307
+ADFG+ + + +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 308 -EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM-VVR 365
K DV+SFG++ EI+ + ++ ++ R+ P + +
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRI-------PYPGMTNPEVIQNLERGYRMVRPDNCPEELY 240
Query: 366 DIVLVSTILFACLRSNPK 383
++ C + P+
Sbjct: 241 QLMR------LCWKERPE 252
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 5e-12
Identities = 44/266 (16%), Positives = 79/266 (29%), Gaps = 68/266 (25%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
ED+++ Y GTG YG + S K++ K+L + + A + +EV++L
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY-GSMTEAEKQMLVSEVNLLRELKH 62
Query: 226 ------YPKYDIET---LLSFMDFV-------CIKDACFWFMNTWRGEACSVFCTMIM-- 267
Y + T L M++ I V + +
Sbjct: 63 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122
Query: 268 ------------------KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-- 307
KP + + + DFG+ L D+S GT Y
Sbjct: 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 182
Query: 308 ----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357
EK D++S G + E+ P ++ S + + + R+
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALMPP------FTAFSQKELAGKIREGKFRRIPY 236
Query: 358 PVDRMVVRDIVLVSTILFACLRSNPK 383
+ I+ L
Sbjct: 237 RYSDELNE-------IITRMLNLKDY 255
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (152), Expect = 9e-12
Identities = 46/275 (16%), Positives = 85/275 (30%), Gaps = 66/275 (24%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDI------ 224
ED+D+ G G YG V +A + + +A+K + + + + E+ I
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNH 62
Query: 225 -----LYPKYDIETLLSFMDFVCIKDACFWFMNTWRG----EACSVFCTMI--------- 266
Y + C F + G +A F ++
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 267 ------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY----------- 307
+KP + + ++DFG+ ++ L + GT Y
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 308 --EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365
E DV+S G+V +L G L SD D + + + +
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGE--------LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234
Query: 366 DIVLVSTILFACLRSNPKTPMQKPFHEISISELRN 400
+ +L L NP I+I +++
Sbjct: 235 APL---ALLHKILVENPS-------ARITIPDIKK 259
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.4 bits (151), Expect = 1e-11
Identities = 45/289 (15%), Positives = 81/289 (28%), Gaps = 75/289 (25%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
D +K+ G G YG VY +A+K L E+ F E ++ +
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMK-EIK 71
Query: 231 IETLLSFMDFVCIKDACFWFMNTW-RGEACSVFCTMIMKPLSWIGLREL----------- 278
L+ + + + G + +S + L +
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 131
Query: 279 ---------------------EAFVADFGMTMHLYCDSSNLT--------------LLAG 303
VADFG++ + D+ L
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 304 TYGYEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363
+ K DV++FGV+ EI + ++L+
Sbjct: 192 KFS-IKSDVWAFGVLLWEIATYGMS---------PYPGIDLSQVYELLEKDYRMERPEGC 241
Query: 364 VRDIVLVSTILFACLRSNPKT-P--------MQKPFHEISISELRNQEM 403
+ ++ AC + NP P + F E SIS+ +E+
Sbjct: 242 PEKVY---ELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 287
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (150), Expect = 2e-11
Identities = 36/264 (13%), Positives = 66/264 (25%), Gaps = 67/264 (25%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-----KVIALKKLHHWENEEPASTRSFQNEVDILY 226
+ G G +G VY L +S +A+K L E+ F E I+
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK--QRVDFLGEAGIMG 64
Query: 227 PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWIGLREL-------- 278
++ ++ + A F S + L +
Sbjct: 65 -QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 123
Query: 279 ------------------------EAFVADFGMTMHLYCDSSNLTLLAGTYG-------- 306
V+DFG++ L D +G
Sbjct: 124 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 183
Query: 307 -------YEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359
DV+SFG+V E++ + N ++ ++ P
Sbjct: 184 AISYRKFTSASDVWSFGIVMWEVMTYGER---------PYWELSNHEVMKAINDGFRLPT 234
Query: 360 DRMVVRDIVLVSTILFACLRSNPK 383
I ++ C +
Sbjct: 235 PMDCPSAIY---QLMMQCWQQERA 255
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 61.8 bits (149), Expect = 2e-11
Identities = 39/201 (19%), Positives = 61/201 (30%), Gaps = 46/201 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDI 231
E + G G YG VY AQ + ALKK+ E E+ + E+ IL +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRL-EKEDEGIPSTTIREISILK-ELKH 59
Query: 232 ETLLSFMDFVCIKDACFWFMNTWRG----------------EACSVFCTMI--------- 266
++ D + K A S ++
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 267 ------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------- 307
+KP + + RE E +ADFG+ T T Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 308 EKCDVYSFGVVALEILMGRQP 328
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPL 200
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.1 bits (150), Expect = 2e-11
Identities = 33/200 (16%), Positives = 60/200 (30%), Gaps = 43/200 (21%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
DFD G G +G V + + ++ + A+K L E +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 226 ------YPKYDIETLLSFMDFVCIKDACFWFMNTWRG----EACSVFCTMI--------- 266
+ L F+ F+ ++ R A ++
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 267 ------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
+K + + ++ + DFG+ D + + GT Y
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 309 KCDVYSFGVVALEILMGRQP 328
D + GVV E++ GR P
Sbjct: 185 AVDWWGLGVVMYEMMCGRLP 204
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.6 bits (149), Expect = 3e-11
Identities = 46/261 (17%), Positives = 82/261 (31%), Gaps = 66/261 (25%)
Query: 171 TEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKY 229
+ F G G +G+VY A+ + +S+V+A+KK+ + + + EV L K
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ-KL 72
Query: 230 DIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWI-----------GLREL 278
+ + + + M G A + KPL + GL L
Sbjct: 73 RHPNTIQYRGCYLREHTAWLVMEYCLGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 279 ---------------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY---------- 307
+ DFG + +S GT +
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS----FVGTPYWMAPEVILAMD 187
Query: 308 -----EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362
K DV+S G+ +E+ + P L + ++ + P L
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPP------LFNMNAMSALYHIAQNESPALQSGHWSE 241
Query: 363 VVRDIVLVSTILFACLRSNPK 383
R+ V +CL+ P+
Sbjct: 242 YFRNFVD------SCLQKIPQ 256
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 5e-11
Identities = 45/275 (16%), Positives = 83/275 (30%), Gaps = 76/275 (27%)
Query: 159 DGRFV-FGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKV-IALKKLHHWENEEPASTR 216
DGRF+ F I G G + +VY T + V +A +L + +
Sbjct: 7 DGRFLKFDIEI------------GRGSFKTVYKGLDTETTVEVAWCELQD-RKLTKSERQ 53
Query: 217 SFQNEVDIL----------------YPKYDIETLLSFMDFVC---------------IKD 245
F+ E ++L + ++ + + IK
Sbjct: 54 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKV 113
Query: 246 ACFWFMNTWRG-EACSVFCTMI----MKPLS-WIGLRELEAFVADFGMTMHLYCDSSNLT 299
W +G + I +K + +I + D G+ +S
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK--RASFAK 171
Query: 300 LLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLL 348
+ GT + E DVY+FG+ LE+ P S + +
Sbjct: 172 AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYP--------YSECQNAAQIYR 223
Query: 349 DVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
V D++ + ++ I+ C+R N
Sbjct: 224 RVTSGVKPASFDKVAIPEVK---EIIEGCIRQNKD 255
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (146), Expect = 6e-11
Identities = 40/260 (15%), Positives = 77/260 (29%), Gaps = 59/260 (22%)
Query: 181 GTGGYGSVYIAQLTSS-KVIALKKLH--HWENEEPASTRSFQNEVDIL------------ 225
G G + +VY A+ ++ +++A+KK+ H + R+ E+ +L
Sbjct: 7 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 66
Query: 226 ---YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI---------------M 267
K +I + FM+ + + + +
Sbjct: 67 DAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL 126
Query: 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY-------------EKCDVYS 314
KP + + +ADFG+ + T T Y D+++
Sbjct: 127 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA 186
Query: 315 FGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTIL 374
G + E+L+ L S DQ + + L M S
Sbjct: 187 VGCILAELLLRVPF------LPGDSDLDQLTRIFETLGTPTEEQWPDM-------CSLPD 233
Query: 375 FACLRSNPKTPMQKPFHEIS 394
+ +S P P+ F
Sbjct: 234 YVTFKSFPGIPLHHIFSAAG 253
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (143), Expect = 1e-10
Identities = 41/263 (15%), Positives = 75/263 (28%), Gaps = 65/263 (24%)
Query: 171 TEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKY 229
+ ++I G G +G VY AQ + + A K + + + E+DIL
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID---TKSEEELEDYMVEIDILA-SC 66
Query: 230 DIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWI-----------GLREL 278
D ++ +D ++ + + G A + +PL+ L L
Sbjct: 67 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 126
Query: 279 EAF---------------------VADFGMTMHLYCDSSNLTLLAGTYGY---------- 307
+ADFG++ GT +
Sbjct: 127 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 186
Query: 308 -------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360
K DV+S G+ +E+ P L+ + ++ R S
Sbjct: 187 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 246
Query: 361 RMVVRDIVLVSTILFACLRSNPK 383
+ + CL N
Sbjct: 247 DFLKK-----------CLEKNVD 258
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.9 bits (142), Expect = 2e-10
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 74/281 (26%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL------ 225
++ + G G +G V + +KV A+K + + A+ ++F E ++
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYRGNKV-AVKCIKN-----DATAQAFLAEASVMTQLRHS 60
Query: 226 -------YPKYDIETLLSFMDFVC-----------------IKDACFWFMNTWRGEACSV 261
+ L +++ + ++
Sbjct: 61 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120
Query: 262 FCTMI---MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + + + + A V+DFG+T SS +
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKF 177
Query: 308 -EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM-VVR 365
K DV+SFG++ EI + ++++ ++ P V
Sbjct: 178 STKSDVWSFGILLWEIYSFGRV-------PYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY 230
Query: 366 DIVLVSTILFACLRSNPKTPMQKP-FHEI--SISELRNQEM 403
+++ C + +P F ++ + ++ E+
Sbjct: 231 EVMK------NCWHLDAA---MRPSFLQLREQLEHIKTHEL 262
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (142), Expect = 2e-10
Identities = 28/201 (13%), Positives = 63/201 (31%), Gaps = 45/201 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
+ ++ G G YG+V+ A+ + +++ALK++ ++++ S E+ +L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL-DDDDEGVPSSALREICLLKELKH 60
Query: 226 -----YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIM------------- 267
+ F + ++ G+ +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 268 -------KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------- 307
KP + + R E +A+FG+ + T Y
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 308 EKCDVYSFGVVALEILMGRQP 328
D++S G + E+ +P
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 3e-10
Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 60/250 (24%)
Query: 181 GTGGYGSVYIAQLTSS---KVIALKKLHHWENEEPASTRSFQNEVDIL-----------Y 226
G+G +G+V K +A+K L + E +PA E +++
Sbjct: 16 GSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 227 PKYDIETLLSFMDFVCI---------------KDACFWFMNTWRGEACSVFCTMI---MK 268
+ E+ + M+ + K+ G + +
Sbjct: 75 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA 134
Query: 269 PLSWIGLRELEAFVADFGMTMHLYCDSSNLTL---LAGTYGY------------EKCDVY 313
+ + + + A ++DFG++ L D + + K DV+
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 314 SFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTI 373
SFGV+ E Q + + R+ P R++ +
Sbjct: 195 SFGVLMWEAFSYGQK-------PYRGMKGSEVTAMLEKGERMGCPAG--CPREMY---DL 242
Query: 374 LFACLRSNPK 383
+ C + +
Sbjct: 243 MNLCWTYDVE 252
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.0 bits (139), Expect = 5e-10
Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 46/202 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
E+F G G YG VY A+ + +V+ALKK+ + E + E+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 60
Query: 226 -------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIM----------- 267
+ L +F+ F + G + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 268 --------KPLSWIGLRELEAFVADFGMTMHLYCDSSNLT-------------LLAGTYG 306
KP + + E +ADFG+ T LL Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 307 YEKCDVYSFGVVALEILMGRQP 328
D++S G + E++ R
Sbjct: 181 STAVDIWSLGCIFAEMVTRRAL 202
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (138), Expect = 5e-10
Identities = 35/261 (13%), Positives = 70/261 (26%), Gaps = 60/261 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK----VIALKKLHHWENEEPASTRSFQNEVDIL-- 225
+D + G G +G V + + +A+K L +P + F EV+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 226 ---------YPKYDIETLLSFMDFVC----------------IKDACFWFMNTWRGEAC- 259
Y + + + + + G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 260 --SVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL---LAGTYGY------- 307
F + + + + DFG+ L + + + + +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 308 -----EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362
D + FGV E+ Q + Q + +D RL P D
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQE------PWIGLNGSQILHKIDKEGERLPRPED-- 239
Query: 363 VVRDIVLVSTILFACLRSNPK 383
+DI ++ C P+
Sbjct: 240 CPQDIY---NVMVQCWAHKPE 257
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.7 bits (139), Expect = 5e-10
Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 45/202 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
EDF G G + +V +A+ L +S+ A+K L + E D++
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 226 ----------------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFC 263
++ + + F+
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 264 TMI---MKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY----------- 307
+I +KP + + ++ + DFG L +S GT Y
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 187
Query: 308 -EKCDVYSFGVVALEILMGRQP 328
+ D+++ G + +++ G P
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPP 209
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 57.4 bits (138), Expect = 6e-10
Identities = 42/263 (15%), Positives = 83/263 (31%), Gaps = 60/263 (22%)
Query: 171 TEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNEVDIL---- 225
++ +++ G GG V++A+ L + +A+K L +P+ F+ E
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 226 ---------------------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEA 258
+ ++ + K A + +
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125
Query: 259 CSVFCTMI---MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL---LAGTYGY----- 307
S +I +KP + + V DFG+ + +++T + GT Y
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185
Query: 308 -------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360
+ DVYS G V E+L G P S ++ V + + P
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT--------GDSPVSVAYQHVREDPIPPSAR 237
Query: 361 RMVVRDIVLVSTILFACLRSNPK 383
+ + ++ L NP+
Sbjct: 238 HEGLSA--DLDAVVLKALAKNPE 258
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (138), Expect = 8e-10
Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 61/263 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK----VIALKKLHHWE-NEEPASTRSFQNEVDIL- 225
E+F++ GTG YG V++ + S + A+K L ++ +T + E +L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 226 ------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI-----MK 268
Y L +D++ + R V + ++
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143
Query: 269 PLSWIGL--REL-----------EAFVADFGMTMHLYCDSSNLT--------------LL 301
L +G+ R++ + DFG++ D + +
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 203
Query: 302 AGTYGY-EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360
G G+ + D +S GV+ E+L G P + +S + + I+ + P+
Sbjct: 204 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA-- 261
Query: 361 RMVVRDIVLVSTILFACLRSNPK 383
+ +D++ L +PK
Sbjct: 262 --LAKDLIQ------RLLMKDPK 276
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.6 bits (136), Expect = 1e-09
Identities = 37/259 (14%), Positives = 80/259 (30%), Gaps = 59/259 (22%)
Query: 171 TEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL---- 225
+ +D + GTG + V +A+ + K++A+K + + S +NE+ +L
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA--KKALEGKEGSMENEIAVLHKIK 65
Query: 226 -----------------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVF 262
++ + F +DA
Sbjct: 66 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 125
Query: 263 CTMI------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY--------- 307
++ L + + + ++DFG++ + S L+ GT GY
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQK 184
Query: 308 ---EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364
+ D +S GV+A +L G P + + +L + P +
Sbjct: 185 PYSKAVDCWSIGVIAYILLCGYPP------FYDENDAKLFEQILKA-EYEFDSPYWDDIS 237
Query: 365 RDIVLVSTILFACLRSNPK 383
+ + +P+
Sbjct: 238 DSAK---DFIRHLMEKDPE 253
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.6 bits (136), Expect = 1e-09
Identities = 31/201 (15%), Positives = 55/201 (27%), Gaps = 48/201 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
+DF I GTG +G V++ + + + A+K L +E +L
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS-IVT 62
Query: 231 IETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWIGLR-------------- 276
++ F M+ G + + +
Sbjct: 63 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122
Query: 277 -----------------ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------ 307
+ DFG ++ L GT Y
Sbjct: 123 KDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYTLCGTPDYIAPEVVSTKPYN 179
Query: 308 EKCDVYSFGVVALEILMGRQP 328
+ D +SFG++ E+L G P
Sbjct: 180 KSIDWWSFGILIYEMLAGYTP 200
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.0 bits (134), Expect = 2e-09
Identities = 37/266 (13%), Positives = 78/266 (29%), Gaps = 64/266 (24%)
Query: 167 IIEATEDFDIKYCFGTGGYGSVYIAQLTSSK-----VIALKKLHHWENEEPASTRSFQNE 221
I++ T +F G+G +G+VY +A+K+L E P + + +E
Sbjct: 5 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 61
Query: 222 VDIL--------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIM 267
++ ++ + M F C+ D + + +C I
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 268 KPLSWIGLR----------------ELEAFVADFGMTMHLYCDSSNLTL--LAGTYGY-- 307
K ++++ R + DFG+ L + +
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 308 ----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357
+ DV+S+GV E++ + +L+
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMTFGSK---------PYDGIPASEISSILEKGERL 232
Query: 358 PVDRMVVRDIVLVSTILFACLRSNPK 383
P + D+ I+ C +
Sbjct: 233 PQPPICTIDVY---MIMVKCWMIDAD 255
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 3e-09
Identities = 37/252 (14%), Positives = 67/252 (26%), Gaps = 64/252 (25%)
Query: 181 GTGGYGSVYIAQLTSSK---VIALKKLHHWENEEPASTRSFQNEVDIL-----------Y 226
G G +GSV K +A+K L + E A T E I+
Sbjct: 18 GCGNFGSVRQGVYRMRKKQIDVAIKVLK--QGTEKADTEEMMREAQIMHQLDNPYIVRLI 75
Query: 227 PKYDIETLLSFMDFV----------------CIKDACFWFMNTWRGEACSVFCTMI---M 267
E L+ M+ + + G + +
Sbjct: 76 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135
Query: 268 KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTL---LAGTYGY------------EKCDV 312
+ + + A ++DFG++ L D S T + + DV
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 195
Query: 313 YSFGVVALEIL-MGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVS 371
+S+GV E L G++P + + P +
Sbjct: 196 WSYGVTMWEALSYGQKP------YKKMKGPEVMAFIEQGKRMECPPECPPELYA------ 243
Query: 372 TILFACLRSNPK 383
++ C +
Sbjct: 244 -LMSDCWIYKWE 254
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 4e-09
Identities = 34/261 (13%), Positives = 71/261 (27%), Gaps = 65/261 (24%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK----VIALKKLHHWENEEPASTRSFQNEVDILYP 227
E ++ C G G +G V+ S + +A+K + + F E +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMR- 63
Query: 228 KYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSW-----------IGLR 276
++D ++ + V ++ + M F + L L
Sbjct: 64 QFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 277 EL---------------------EAFVADFGMTMHLYCDSSNL-TLLAGTYGY------- 307
L + DFG++ ++ + + +
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 308 -----EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM 362
DV+ FGV EILM ++D + + + P
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVK-----PFQGVKNNDVIGRIENGERLPMPPNCPPT 237
Query: 363 VVRDIVLVSTILFACLRSNPK 383
+ ++ C +P
Sbjct: 238 LYS-------LMTKCWAYDPS 251
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 55.4 bits (132), Expect = 5e-09
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 9 LRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHI 67
L+NL L L NN++ P SSL +L L +NNK+S S + NL ++ L + H
Sbjct: 306 LKNLTYLTLYFNNISDISPVSSLTKLQ--RLFFANNKVSD--VSSLANLTNINWLSAGHN 361
Query: 68 FIKGTIPYPLGVLP-LSYLDLSFN 90
I PL L ++ L L+
Sbjct: 362 QISDLT--PLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 53.1 bits (126), Expect = 3e-08
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ SL L L+ + N ++ SSL LT+ L+ +N++S P + NL ++ L
Sbjct: 324 PVSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLG 379
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 26/118 (22%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69
NL L L+GN L +L LT+ L L+NN++S P + L +L+ L I
Sbjct: 220 NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 275
Query: 70 KGTIP---------------------YPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
P + L+YL L FN++S P TKL+R
Sbjct: 276 SNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 333
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNN 43
+ + +L N+ L N ++ P ++L R+T L L++
Sbjct: 342 SDVSSLANLTNINWLSAGHNQISDLTPLANLTRIT--QLGLNDQ 383
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 54.8 bits (130), Expect = 5e-09
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 16 YLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLD 63
L N + G++P L +L +L +S N L G IP + GNLQ
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSA 297
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 51.3 bits (121), Expect = 8e-08
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 40 LSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP 97
L NN++ G++P + L+ L L+ + G IP G L + N G P
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 50.1 bits (118), Expect = 2e-07
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIP 50
T+P + L+ L SL +S NNL G IP G L +NNK P
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 5e-09
Identities = 46/295 (15%), Positives = 84/295 (28%), Gaps = 94/295 (31%)
Query: 158 FDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHH---WENEEPA 213
+ ++ G ++ G+GG+GSVY ++ + +A+K + + E
Sbjct: 2 LESQYQVGPLL------------GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 49
Query: 214 STRSFQNEVDIL--------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRG--- 256
+ EV +L ++ + ++ F F+
Sbjct: 50 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 109
Query: 257 -----------------EACSVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT 299
C V I I L E + DFG L + T
Sbjct: 110 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYT 167
Query: 300 LLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIM 346
GT Y V+S G++ +++ G P E D+ I+
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------HDEEII 217
Query: 347 LLDV-LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRN 400
V R+S ++ CL P + E++N
Sbjct: 218 RGQVFFRQRVSSECQHLIRW-----------CLALRPS-------DRPTFEEIQN 254
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (130), Expect = 7e-09
Identities = 39/282 (13%), Positives = 80/282 (28%), Gaps = 75/282 (26%)
Query: 153 FSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHH---WE 208
F N D + G+ + G+G + V + S+ A K +
Sbjct: 3 FRQENVDDYYDTGEEL------------GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS 50
Query: 209 NEEPASTRSFQNEVDIL---------------YPKYDIETLLSFMDFVCIKDACFWFMNT 253
+ S + EV IL K D+ +L + + D +
Sbjct: 51 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL 110
Query: 254 WRGEACSVFCTMIMKPLSWI--------------------GLRELEAFVADFGMTMHLYC 293
EA I+ + ++ + + + DFG+ +
Sbjct: 111 TEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169
Query: 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSS 341
+ + GT + + D++S GV+ +L G P + +
Sbjct: 170 GNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL----GDTKQET 224
Query: 342 DQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
N+ ++ + +D + L +PK
Sbjct: 225 LANVSAVNYEFEDEYFSNTSALAKDFIR------RLLVKDPK 260
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (127), Expect = 1e-08
Identities = 46/307 (14%), Positives = 88/307 (28%), Gaps = 86/307 (28%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL------ 225
++ G G +G V+ + +V A+K RS+ E +I
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWRGEEV-AVKIFS------SREERSWFREAEIYQTVMLR 55
Query: 226 ------------YPKYDIETLLSFMDFVC--------------IKDACFWFMNTWRGEAC 259
L D+ ++ ++T G A
Sbjct: 56 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 115
Query: 260 SVFCTMIMKPLSWIGLRELEAF-----------VADFGMTMHLYCDSSNLTL----LAGT 304
+ + I R+L++ +AD G+ + + + + GT
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 305 YGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLS------SSSS 340
Y ++ D+Y+ G+V EI G + S
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235
Query: 341 SDQNIMLLDVLDPRLSPPVDRMVVRDIVL--VSTILFACLRSNPKTPMQKP-FHEI--SI 395
M V + +L P + L ++ I+ C +N + I ++
Sbjct: 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA---ARLTALRIKKTL 292
Query: 396 SELRNQE 402
S+L QE
Sbjct: 293 SQLSQQE 299
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (127), Expect = 2e-08
Identities = 37/275 (13%), Positives = 73/275 (26%), Gaps = 79/275 (28%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS---KVIALKKLHHWENEEPASTRSFQNEVDILYPK 228
D + G G +G V A++ A+K++ + +++ R F E+++L
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKL 67
Query: 229 YDIETLLSFMDFVCIKDACFWFM---------------NTWRGEACSVFCTMIMKPLSWI 273
+++ + + + + + LS
Sbjct: 68 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 127
Query: 274 GLRELEAFVA--------------------------------DFGMTMHLYCDSSNLTLL 301
L A VA DFG++ T+
Sbjct: 128 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG-QEVYVKKTMG 186
Query: 302 AGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLD 349
+ DV+S+GV+ EI+ + +
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-------PYCGMTCAELYEKL 239
Query: 350 VLDPRLSPPVDR-MVVRDIVLVSTILFACLRSNPK 383
RL P++ V D++ C R P
Sbjct: 240 PQGYRLEKPLNCDDEVYDLMR------QCWREKPY 268
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 2e-08
Identities = 40/257 (15%), Positives = 71/257 (27%), Gaps = 70/257 (27%)
Query: 181 GTGGYGSVYIAQLTSSK----VIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLS 236
G G +G VY L + A+K L+ + F E I+ + +LS
Sbjct: 36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMK-DFSHPNVLS 92
Query: 237 FMDFVCIKDACFWF-MNTWRGEACSVFCTMIMKPLSW-----IGLRELEAF--------- 281
+ + + + F + GL+ +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 152
Query: 282 ------------------VADFGMTMHLYCDS----SNLTLLAGTYGY------------ 307
VADFG+ +Y N T +
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 212
Query: 308 EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRM-VVRD 366
K DV+SFGV+ E++ P + +I + + RL P + +
Sbjct: 213 TKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE 265
Query: 367 IVLVSTILFACLRSNPK 383
++L C +
Sbjct: 266 VML------KCWHPKAE 276
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.4 bits (125), Expect = 4e-08
Identities = 30/205 (14%), Positives = 56/205 (27%), Gaps = 49/205 (23%)
Query: 169 EATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL-- 225
E E + I G G +G V+ TSS K K + ++ + E+ IL
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ----VLVKKEISILNI 57
Query: 226 ----------YPKYDIETLLSFMDFV----------------CIKDACFWFMNTWRG--- 256
+E L+ +F+ ++ +
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 257 --EACSVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------- 307
+ + + + R + +FG L + L Y
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH 177
Query: 308 ----EKCDVYSFGVVALEILMGRQP 328
D++S G + +L G P
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGINP 202
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.8 bits (123), Expect = 5e-08
Identities = 34/286 (11%), Positives = 75/286 (26%), Gaps = 88/286 (30%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS------KVIALKKLHHWENEEPASTRSFQNEVDIL 225
+ + G G +G V+ A+ ++A+K L + + FQ E ++
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALM 70
Query: 226 ------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIM------ 267
+ + +++ D + + CS+ + +
Sbjct: 71 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130
Query: 268 ----KPLSWIGLR--------------------------------ELEAFVADFGMTMHL 291
PLS + +ADFG++ ++
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 190
Query: 292 YCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSS 337
Y A + + DV+++GVV EI
Sbjct: 191 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ--------P 242
Query: 338 SSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
++ V D + + + + ++ C P
Sbjct: 243 YYGMAHEEVIYYVRDGNILACPENCPLE----LYNLMRLCWSKLPA 284
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.0 bits (124), Expect = 5e-08
Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 63/272 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
DF + G GG+G VY + + K+ A+K L + NE +L
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 226 ----------YPKYDIETLLSFMDFV-------CIKDACFWFMNTWRGEACSVFCTMI-- 266
Y + + L +D + + + R A + +
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 267 ---------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY---------- 307
+KP + + ++D G+ GT+GY
Sbjct: 124 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHASVGTHGYMAPEVLQKGV 181
Query: 308 ---EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364
D +S G + ++L G P ++ +D + ++ +
Sbjct: 182 AYDSSADWFSLGCMLFKLLRGHSPFR--------QHKTKDKHEIDRMTLTMAVELPDSFS 233
Query: 365 RDIVLVSTILFACLRSNPK---TPMQKPFHEI 393
++ ++L L+ + + + E+
Sbjct: 234 PELR---SLLEGLLQRDVNRRLGCLGRGAQEV 262
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.3 bits (122), Expect = 7e-08
Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 42/198 (21%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
+ FD GTG +G V + + S A+K L + + NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVN 99
Query: 231 IETLLSFMDFVCIKDACFWFMNTWRG----------------EACSVFCTMI-------- 266
L+ + M G A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 267 -------MKP----LSWIGLRELEAF-----VADFGMTMHLYCDSSNLTLLAGTYGYEKC 310
+KP + G ++ F V T+ ++ ++ +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219
Query: 311 DVYSFGVVALEILMGRQP 328
D ++ GV+ E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 7e-08
Identities = 41/292 (14%), Positives = 86/292 (29%), Gaps = 68/292 (23%)
Query: 148 RRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHH 206
R++ ++W R+ + G+G YGSV A + +A+KKL
Sbjct: 6 RQELNKTIWEVPERYQNLSPV------------GSGAYGSVCAAFDTKTGLRVAVKKLSR 53
Query: 207 WENEEPASTRSFQNEVDIL----------------YPKYDIETLLSFMDFVCIKDACFWF 250
+ + E+ +L + E ++ +
Sbjct: 54 -PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 112
Query: 251 MNTWRGEACSVFCTMI------------------MKPLSWIGLRELEAFVADFGMTMHLY 292
+ + V + +KP + + E + DFG+ H
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 293 CDSSNLT----------LLAGTYGYEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD 342
+ + +L + + D++S G + E+L GR + D
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL------FPGTDHID 226
Query: 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEIS 394
Q ++L + + P ++ + + L PK F +
Sbjct: 227 QLKLILRL----VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 274
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 51.4 bits (121), Expect = 7e-08
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
+L L +S N L +P+ RL L S N L+ +P NL++L
Sbjct: 283 PPSLEELNVSNNKLI-ELPALPPRLE--RLIASFNHLA-EVPELPQNLKQLH 330
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 48.3 bits (113), Expect = 9e-07
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQEL 59
+P L L S N+L +P L L + N L P ++++L
Sbjct: 298 ELPALPPRLERL---IASFNHLA-EVPELPQNLK--QLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.4 bits (108), Expect = 4e-06
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 10 RNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69
R L L+ L+ S+P L S L S N L+ +P +L+ L ++ +
Sbjct: 38 RQAHELELNNLGLS-SLPELPPHLES--LVASCNSLT-ELPELPQSLKSLLVDNNNLKAL 93
Query: 70 KGTIP 74
P
Sbjct: 94 SDLPP 98
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (119), Expect = 1e-07
Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 21/109 (19%)
Query: 11 NLVSLYLSGNNLTGS-IPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIF 68
++ SL + L+ + L L C + L + L+ + +I + L +
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA--LRVNPA---- 56
Query: 69 IKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLS 117
L+ L+L N+L + L+ ++ + L
Sbjct: 57 -------------LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 1e-04
Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 23/102 (22%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGR-LTSCT----LTLSNNKLSGSIPSEIGNLQELSHLDSR 65
L L+L+ +++ S SSL L + L LSNN L + ++ +
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES--VRQPGCL 427
Query: 66 HIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRK 107
L L L S + L + K
Sbjct: 428 ----------------LEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 3e-04
Identities = 9/75 (12%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGR-LTSCT----LTLSNNKLSGSIPSEIGNLQELS 60
+ L+ + L LT + + L L L +N+L + +
Sbjct: 23 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82
Query: 61 HLDSRHIFIKGTIPY 75
+ + ++
Sbjct: 83 SCKIQKLSLQNCCLT 97
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 9e-04
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC------TLTLSNNKLSGSIPSEIGN 55
+ + + +L L LS N L + L L L + S + +
Sbjct: 389 LAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQA 448
Query: 56 LQE 58
L++
Sbjct: 449 LEK 451
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 50.5 bits (120), Expect = 2e-07
Identities = 39/258 (15%), Positives = 78/258 (30%), Gaps = 60/258 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
+ +DI GTG +G V+ ++ A K + + + + E+ +
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLRH 82
Query: 226 -------YPKYDIETLLSFMDFVC----------------IKDACFWFMNTWRG-----E 257
D ++ +F+ +A + +G E
Sbjct: 83 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 142
Query: 258 ACSVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT------------LLAGTY 305
V + + + + R E + DFG+T HL S
Sbjct: 143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 202
Query: 306 GYEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVR 365
GY D++S GV++ +L G P + D+ + + D + +
Sbjct: 203 GY-YTDMWSVGVLSYILLSGLSPFG-------GENDDETLRNVKSCDWNMDDSAFSGISE 254
Query: 366 DIVLVSTILFACLRSNPK 383
D + L ++P
Sbjct: 255 DGK---DFIRKLLLADPN 269
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 3e-07
Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 55/212 (25%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQ--LTSSKVIALKKLHHWENEEPASTRSFQNEVDIL-- 225
A + ++ G G YG V+ A+ + +ALK++ + E S EV +L
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-QTGEEGMPLSTIREVAVLRH 63
Query: 226 -----------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIM- 267
+ D ET L+ + +D + + +M
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 123
Query: 268 -------------------KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY- 307
KP + + + +ADFG+ +Y LT + T Y
Sbjct: 124 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL-ARIYSFQMALTSVVVTLWYR 182
Query: 308 -----------EKCDVYSFGVVALEILMGRQP 328
D++S G + E+ +
Sbjct: 183 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 214
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.3 bits (116), Expect = 4e-07
Identities = 31/134 (23%), Positives = 45/134 (33%), Gaps = 4/134 (2%)
Query: 14 SLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI 73
+ S L +P L T+ L L NNK++ + NL+ L L + I
Sbjct: 14 VVQCSDLGLE-KVPKDLPPDTA-LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKIS 71
Query: 74 PYPLGVLP-LSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINAFLTFLILGILFF 132
P L L L LS N L +P+ + L+ I + L I+
Sbjct: 72 PGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE 130
Query: 133 LRCKKNKIITKRNS 146
L K N
Sbjct: 131 LGTNPLKSSGIENG 144
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.4 bits (106), Expect = 6e-06
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQEL 59
+P ++ + L L N +T L + TL L NNK+S P L +L
Sbjct: 24 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 60 SHLDSRHIFIKGTIP 74
L +K
Sbjct: 82 ERLYLSKNQLKELPE 96
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.5 bits (101), Expect = 3e-05
Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHL 62
+ G +L L+L GN +T +SL L + L LS N +S + N L L
Sbjct: 165 IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 224
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPK-HLTTKLRRKVTRLISIVLSINAF 121
+ + + + L N++S K + L N
Sbjct: 225 HLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
Query: 122 LTFLI 126
+ I
Sbjct: 285 QYWEI 289
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.3 bits (98), Expect = 5e-05
Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELS 60
+ +L+NL +L L N ++ P + L L LS N+L LQEL
Sbjct: 47 KDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELR 106
Query: 61 HLDSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSINA 120
++ ++ ++ L + + L + SG + + +L I ++
Sbjct: 107 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF-----QGMKKLSYIRIADTN 161
Query: 121 FLTFL--ILGILFFLRCKKNKI 140
T + L L NKI
Sbjct: 162 ITTIPQGLPPSLTELHLDGNKI 183
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (115), Expect = 5e-07
Identities = 30/281 (10%), Positives = 65/281 (23%), Gaps = 82/281 (29%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
G G +G V A ++ +A+K L + + +E+ +L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTEREALMSELKVL 80
Query: 226 -----YPK--------YDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIM----- 267
+ L ++ C D + CS IM
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 268 -------------------------------KPLSWIGLRELEAFVADFGMTMHLYCDSS 296
+ + + DFG+ + DS+
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 297 NL--TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSD 342
+ + + DV+S+G+ E+
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--------PGMP 252
Query: 343 QNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
+ ++ ++ I+ C ++P
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMY---DIMKTCWDADPL 290
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 7e-07
Identities = 42/281 (14%), Positives = 80/281 (28%), Gaps = 64/281 (22%)
Query: 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVD 223
G + + + G G YG V A + +A+KK+ +E++ + E+
Sbjct: 1 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT--YCQRTLREIK 58
Query: 224 IL----------------YPKYDIETLLSFMDFVCIKDACFWFMNTWR---GEACSVFCT 264
IL P + + + + D + + T C
Sbjct: 59 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGAD-LYKLLKTQHLSNDHICYFLYQ 117
Query: 265 MI---------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLT---------- 299
++ +KP + + + + DFG+ D +
Sbjct: 118 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 177
Query: 300 ------LLAGTYGYEKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP 353
+L + D++S G + E+L R DQ +L +L
Sbjct: 178 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI------FPGKHYLDQLNHILGILG- 230
Query: 354 RLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEIS 394
P + I L + L K P + F
Sbjct: 231 ---SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNAD 268
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 1e-06
Identities = 34/213 (15%), Positives = 59/213 (27%), Gaps = 57/213 (26%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
++ G G +G V+ A+ + + +ALKK+ ENE+ + E+ IL
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM-ENEKEGFPITALREIKILQLLKH 68
Query: 226 ---YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWI--------- 273
+I + C F A + ++ LS I
Sbjct: 69 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 128
Query: 274 GLRELEAF---------------------VADFGMTMHLYCDSS----NLTLLAGTYGY- 307
GL + +ADFG+ + T T Y
Sbjct: 129 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 188
Query: 308 ------------EKCDVYSFGVVALEILMGRQP 328
D++ G + E+
Sbjct: 189 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPI 221
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 47.7 bits (113), Expect = 1e-06
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 50/203 (24%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL----Y 226
+ +DI G+G +G V+ ++ +V K ++ P + +NE+ I+ +
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFIN---TPYPLDKYTVKNEISIMNQLHH 85
Query: 227 PK----YDI----ETLLSFMDFVC----------------IKDACFWFMNTWRG-----E 257
PK +D ++ ++F+ + + G E
Sbjct: 86 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 145
Query: 258 ACSVFCTMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY---------- 307
V + + + + + DFG+ L D + + T +
Sbjct: 146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-VKVTTATAEFAAPEIVDREP 204
Query: 308 --EKCDVYSFGVVALEILMGRQP 328
D+++ GV+ +L G P
Sbjct: 205 VGFYTDMWAIGVLGYVLLSGLSP 227
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.1 bits (111), Expect = 1e-06
Identities = 31/279 (11%), Positives = 70/279 (25%), Gaps = 79/279 (28%)
Query: 160 GRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSF 218
R+ G I G+G +G +Y+ + + + +A+K
Sbjct: 7 NRYRLGRKI------------GSGSFGDIYLGTDIAAGEEVAIKLEC-----VKTKHPQL 49
Query: 219 QNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWI----- 273
E I + + + + + G + + S
Sbjct: 50 HIESKIYK-MMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLL 108
Query: 274 ------GLREL------------------------EAFVADFGMTMHLYCDSSN------ 297
+ + ++ DFG+ ++
Sbjct: 109 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 168
Query: 298 -LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQN 344
L GT Y + D+ S G V + +G P ++ +
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP------WQGLKAATKR 222
Query: 345 IMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
+ + ++S P++ + +T L C
Sbjct: 223 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 2e-06
Identities = 33/287 (11%), Positives = 77/287 (26%), Gaps = 89/287 (31%)
Query: 172 EDFDIKYCFGTGGYGSVYIA------QLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
E+ + G+G +G V A + S +A+K L E + + + +E+ ++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK--EKADSSEREALMSELKMM 94
Query: 226 YPKYDIETLLSFMDFVCIKDACFWFM----------------------NTWRGEACSVFC 263
E +++ + + + +
Sbjct: 95 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 154
Query: 264 TMIMKPLSWI-----------GLREL---------------------EAFVADFGMTMHL 291
+ L++ G+ L + DFG+ +
Sbjct: 155 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 214
Query: 292 YCDSSNLTL--LAGTYGY------------EKCDVYSFGVVALEIL-MGRQPGELLSSLS 336
DS+ + + K DV+S+G++ EI +G P
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP-------- 266
Query: 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
+ ++ +I I+ +C + +
Sbjct: 267 -YPGIPVDANFYKLIQNGFKMDQPFYATEEIY---IIMQSCWAFDSR 309
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.2 bits (108), Expect = 2e-06
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
E+ + + + + NLT ++P L + T+ L LS N L + + L+ L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPKDTT-ILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 65 RH 66
Sbjct: 63 DR 64
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.002
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNK 44
+P ++ ++ L+LS N L ++L T T L L +
Sbjct: 24 ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE 66
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 46.2 bits (109), Expect = 3e-06
Identities = 34/219 (15%), Positives = 63/219 (28%), Gaps = 69/219 (31%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLH------HWENEEPASTRSFQNEVDI 224
E+++ K G G V + K A+K + E + EVDI
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 225 LYPKYDIETLLSFMDFVCIKDACFWFMNTW----------------------RGEACSVF 262
L + + + +KD + E +
Sbjct: 63 L------RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 116
Query: 263 CTMI---------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY 307
++ +KP + + ++ + DFG + L L + GT Y
Sbjct: 117 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPSY 175
Query: 308 ------------------EKCDVYSFGVVALEILMGRQP 328
++ D++S GV+ +L G P
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 214
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 46.4 bits (109), Expect = 3e-06
Identities = 34/282 (12%), Positives = 91/282 (32%), Gaps = 60/282 (21%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNEVDIL---YP 227
+D+ + G G Y V+ A +T+++ + +K L P + + E+ IL
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK------PVKKKKIKREIKILENLRG 88
Query: 228 KYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPLSWIGLRELEAF------ 281
+I TL + + F + + ++ T+ + + L+A
Sbjct: 89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 148
Query: 282 ----------------------VADFGMTMHLYCDSSNLTLLAGTYGY------------ 307
+ D+G+ + + + +
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRYFKGPELLVDYQMY 207
Query: 308 -EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRD 366
D++S G + ++ ++P + DQ + + VL + + + +
Sbjct: 208 DYSLDMWSLGCMLASMIFRKEP-----FFHGHDNYDQLVRIAKVLG---TEDLYDYIDKY 259
Query: 367 IVLVSTILFACLRSNPKTPMQKPFHEISISELRNQEMYFIEK 408
+ + L + + ++ H + + + + F++K
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 301
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (106), Expect = 7e-06
Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 48/212 (22%)
Query: 163 VFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRSFQNE 221
V + + G+G G V A + +A+KKL + + E
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRE 66
Query: 222 VDIL------------------YPKYDIETLLSFMDFVC------------IKDACFWFM 251
+ ++ + + + M+ + + +
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 126
Query: 252 NTWRGEACSVFCTMIM---KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY- 307
G +I KP + + + + DFG+ S +T T Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTSFMMTPYVVTRYYR 185
Query: 308 -----------EKCDVYSFGVVALEILMGRQP 328
E D++S G + E++ +
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (105), Expect = 9e-06
Identities = 33/226 (14%), Positives = 67/226 (29%), Gaps = 58/226 (25%)
Query: 148 RRDNEFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHH 206
R++ + W + + G+G YG+V A + +A+KKL+
Sbjct: 6 RQEVTKTAWEVRAVYRDLQPV------------GSGAYGAVCSAVDGRTGAKVAIKKLYR 53
Query: 207 WENEEPASTRSFQNEVDIL------------YPKYDIETLLSFMDFVCIKDACFWFMNTW 254
+ + E+ +L ETL F DF + +
Sbjct: 54 -PFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL 112
Query: 255 R-------GEACSVFCTMI---------------MKPLSWIGLRELEAFVADFGMTMHLY 292
+ M+ +KP + + E + DFG+
Sbjct: 113 MKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 172
Query: 293 CDSSNLT----------LLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+ + +L + D++S G + E++ G+
Sbjct: 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 218
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 41.6 bits (97), Expect = 2e-05
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 9/106 (8%)
Query: 15 LYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI 73
L+L+ +LT + L +L T L LS+N+L P+ + L+ L L + ++ +
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALE-NV 58
Query: 74 PYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLISIVLSIN 119
+ L L L N L RL+ + L N
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSC----PRLVLLNLQGN 100
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 41.6 bits (97), Expect = 2e-05
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELS 60
T+ + L + L LS N L P +L L + +++ ++ +
Sbjct: 11 TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVDGVANLPRLQE 69
Query: 61 HLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSG--GIPKHLTTKLRRKVTRLIS 113
L + + PL P L L+L N L GI + L L V+ +++
Sbjct: 70 LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML-PSVSSILT 124
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 43.3 bits (101), Expect = 3e-05
Identities = 33/293 (11%), Positives = 72/293 (24%), Gaps = 72/293 (24%)
Query: 159 DGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHW--------EN 209
+ G I G G +G ++ L +++ +A+K E
Sbjct: 4 GVHYKVGRRI------------GEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEY 51
Query: 210 EEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI--- 266
++ Y + + +D + + + +V
Sbjct: 52 RTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQML 111
Query: 267 ---------------MKPLSWIGLRELE-----AFVADFGMTMHLYCDSSN-------LT 299
+KP +++ R +V DFGM +
Sbjct: 112 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171
Query: 300 LLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIML 347
L+GT Y + D+ + G V + L G P ++
Sbjct: 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP------WQGLKAATNKQKY 225
Query: 348 LDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRN 400
+ + + S P+ + + P ++
Sbjct: 226 ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFD---ATPDYDYLQGLFSK 275
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 3e-05
Identities = 46/297 (15%), Positives = 80/297 (26%), Gaps = 89/297 (29%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
E + G G +G VY +A+K ++ E F NE ++
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVM 77
Query: 226 YPKYDIETLLSFMDFVCIKDACFWFM---------NTWRGEACSVFCTMIMKPLSWI--- 273
+++ ++ + V M + R ++ ++ P S
Sbjct: 78 K-EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136
Query: 274 --------GLREL---------------------EAFVADFGMTMHLYCDSSNL--TLLA 302
G+ L + DFGMT +Y
Sbjct: 137 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196
Query: 303 GTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV 350
+ DV+SFGVV EI + +L V
Sbjct: 197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ--------PYQGLSNEQVLRFV 248
Query: 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNP-------------KTPMQKPFHEIS 394
++ L D + ++ C + NP K M+ F E+S
Sbjct: 249 MEGGLLDKPDNCPDM----LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 301
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 5e-05
Identities = 29/282 (10%), Positives = 68/282 (24%), Gaps = 85/282 (30%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS--------KVIALKKLHHWENEEPASTRSFQNEVD 223
+ + G G +G V +A+ +A+K L E+ +E++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEME 70
Query: 224 IL-------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMIMKPL 270
++ L +++ + ++ R P
Sbjct: 71 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN-LREYLQARRPPGLEYSYNPSHNPE 129
Query: 271 SWIGLRELEAFVADFGMTMHLYCD---------SSNLTL--------------------- 300
+ ++L + M + N+ +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 301 -------LAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSS 341
+ + DV+SFGV+ EI
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS-------PYPGVP 242
Query: 342 DQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
+ + L R+ P + ++ ++ C + P
Sbjct: 243 VEELFKLLKEGHRMDKPSN--CTNELY---MMMRDCWHAVPS 279
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 6e-05
Identities = 39/209 (18%), Positives = 67/209 (32%), Gaps = 60/209 (28%)
Query: 173 DFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL------ 225
+ G G +G VY A+L S +++A+KK+ R E+ I+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 73
Query: 226 ------------YPKYDIETLLSFMDFVC------------------IKDACFWFMNTWR 255
K D L +D+V + + +R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 256 GEACSVFCTMI---MKPLSWIGLRELEAF-VADFGMTMHLYCDSSNLT-----------L 300
A + +KP + + + + DFG L N++ L
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 301 LAGTYGY-EKCDVYSFGVVALEILMGRQP 328
+ G Y DV+S G V E+L+G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPI 222
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (96), Expect = 1e-04
Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 50/247 (20%)
Query: 181 GTGGYGSVYIAQLTSS-KVIALKKLHHWE---NEEPASTRSFQNE-----VDILYPKYDI 231
G G G V + + ALK L E R+ Q VD+ Y
Sbjct: 21 GLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAG 80
Query: 232 ETLLSF-MDFV-----------------CIKDACFWFMNTWRGEAC---SVFCTMIMKP- 269
L M+ + ++A + +KP
Sbjct: 81 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 140
Query: 270 --LSWIGLRELEAFVADFGMTMHLYCDSSNLT-----------LLAGTYGYEKCDVYSFG 316
L + DFG +S T +L + CD++S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 317 VVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFA 376
V+ +L G P L+ S I + P V+ ++
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR------N 254
Query: 377 CLRSNPK 383
L++ P
Sbjct: 255 LLKTEPT 261
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 36/297 (12%), Positives = 81/297 (27%), Gaps = 79/297 (26%)
Query: 159 DGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQ-LTSSKVIALKKLHHWENEEPASTRS 217
D R++ + G G + +V++A+ + ++ +A+K + + T +
Sbjct: 12 DARYILVRKL------------GWGHFSTVWLAKDMVNNTHVAMKIVR----GDKVYTEA 55
Query: 218 FQNEVDIL-------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRG-------- 256
++E+ +L I LL + + G
Sbjct: 56 AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 115
Query: 257 ----------EACSVFCTMI-----MKPLSWIGLREL-----------------EAFVAD 284
+ ++ M I ++ + +AD
Sbjct: 116 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIAD 175
Query: 285 FGMTMHLYCDSSNLT---------LLAGTYGYEKCDVYSFGVVALEILMGRQPGELLSSL 335
G +N +L G D++S + E++ G E
Sbjct: 176 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 235
Query: 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQKPFHE 392
S + D ++++L S + S L + P++ E
Sbjct: 236 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 292
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (94), Expect = 2e-04
Identities = 31/280 (11%), Positives = 63/280 (22%), Gaps = 81/280 (28%)
Query: 172 EDFDIKYCFGTGGYGSVYIA------QLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
+ + G G +G V A + + + +A+K L R+ +E+ IL
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 70
Query: 226 YPKYDIETLLSFMDFVCIKDACFWFMNTW----------------RGEACSVFCTMIMKP 269
+++ + + + +
Sbjct: 71 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130
Query: 270 LSWI-----------GLREL---------------------EAFVADFGMTMHLYCDSSN 297
L+ G+ L + DFG+ +Y D
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 190
Query: 298 L--TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQ 343
+ + + DV+SFGV+ EI
Sbjct: 191 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS--------PYPGVKI 242
Query: 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPK 383
+ L ++ + C P
Sbjct: 243 DEEFCRRLKEGTRMRAPDYTTPEMY---QTMLDCWHGEPS 279
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 7e-04
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Query: 14 SLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD-SRHIFIKGT 72
+L L+G NL + L + + + + + H+D S + T
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVST 62
Query: 73 IPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
+ L L L L LS I L
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTL 91
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.001
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLD 63
+ +L L +L N ++ P +SL L + L NN++S P + N L +
Sbjct: 169 LANLSKLTTLKADDNKISDISPLASLPNLI--EVHLKNNQISDVSP--LANTSNLFIVT 223
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 36.5 bits (83), Expect = 0.003
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 5 EIGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSN 42
+ SL NL+ ++L N ++ P ++ L +TL+N
Sbjct: 190 PLASLPNLIEVHLKNNQISDVSPLANTSNLF--IVTLTN 226
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.4 bits (82), Expect = 0.004
Identities = 8/46 (17%), Positives = 12/46 (26%), Gaps = 2/46 (4%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCTLTLSNNKLSGSIPS 51
V L +S + L L S L +P+
Sbjct: 197 FHGASGPVILDISRTRIHSLPSYGLENLKKLR-ARSTYNLK-KLPT 240
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 408 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.98 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.98 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.98 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.98 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.97 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.97 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.97 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.97 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.97 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.97 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.97 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.97 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.97 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.97 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.97 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.97 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.97 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.97 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.97 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.97 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.97 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.97 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.97 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.97 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.97 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.96 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.96 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.96 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.96 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.95 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.95 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.95 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.95 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.94 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.94 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.94 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.94 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.93 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.93 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.93 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.92 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.84 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.59 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.51 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.47 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.43 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.4 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.32 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.32 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.3 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.27 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.21 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.19 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.15 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.1 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.09 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.05 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.04 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.02 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.02 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.92 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.91 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.79 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.77 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.72 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.72 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.66 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.65 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.6 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.38 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.36 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.33 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.2 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.19 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.19 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.87 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.86 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.84 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.65 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.59 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.56 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.14 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.92 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.39 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.66 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 90.8 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 87.3 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-35 Score=273.70 Aligned_cols=207 Identities=20% Similarity=0.292 Sum_probs=144.2
Q ss_pred cccHHHHHHHHhhcc---------cceeecccceeEEEEEEeCC-C---cEEEEEecccccCCCcchhhHHHHHHHHhc-
Q 037624 161 RFVFGDIIEATEDFD---------IKYCFGTGGYGSVYIAQLTS-S---KVIALKKLHHWENEEPASTRSFQNEVDILY- 226 (408)
Q Consensus 161 ~~~~~~l~~at~~f~---------~~~~iG~G~~G~Vy~~~~~~-g---~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~- 226 (408)
.++|+|+.+|+.+|. ..+.||+|+||+||+|++.. + ..||||++... ......+.|.+|+++|.
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~ 83 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQ 83 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS--CCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHh
Confidence 567888888887764 35789999999999999843 3 26899998643 23345678999999998
Q ss_pred -ccCCcceeeeEeEeeecCCccchhhhhhcccchhhhhhhc----------------------------------cCccc
Q 037624 227 -PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTMI----------------------------------MKPLS 271 (408)
Q Consensus 227 -~~~n~~~l~~~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~ 271 (408)
+|+|+++++++ +..+...++++||+ ++|+|..++. +||.|
T Consensus 84 l~HpnIv~l~g~----~~~~~~~~iv~Ey~-~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~N 158 (299)
T d1jpaa_ 84 FDHPNVIHLEGV----VTKSTPVMIITEFM-ENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARN 158 (299)
T ss_dssp CCCTTBCCEEEE----ECSSSSCEEEEECC-TTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred CCCCCCccEEEE----EeeCCEEEEEEEec-CCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccce
Confidence 89999888888 88888999999999 9999987662 79999
Q ss_pred cccccCCceEEeecccccccCCCCCee-----eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCDSSNL-----TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLS 333 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~~~~~-----~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~ 333 (408)
++++.++++||+|||+|+......... ....||+.| .++|||||||++|||+| |+.||....
T Consensus 159 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~ 238 (299)
T d1jpaa_ 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 238 (299)
T ss_dssp EEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred EEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999875432211 223567767 68999999999999998 899986432
Q ss_pred cccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 334 SLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .. +...+....+.+. +.++...+.+++..||+.||++|++
T Consensus 239 ~---------~~-~~~~i~~~~~~~~---~~~~~~~l~~li~~cl~~~P~~RPs 279 (299)
T d1jpaa_ 239 N---------QD-VINAIEQDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPK 279 (299)
T ss_dssp H---------HH-HHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred H---------HH-HHHHHHcCCCCCC---CccchHHHHHHHHHHcCCCHhHCcC
Confidence 1 11 1111111111111 1123455778899999999999944
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-35 Score=268.62 Aligned_cols=198 Identities=19% Similarity=0.255 Sum_probs=139.0
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||+||+|++.+++.||||+++... ...++|.+|++++. +|+|+++++++ |..+...+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~----~~~~~~~~ 76 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGV----CLEQAPIC 76 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECSSSSCE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc----CcHHHHHHHHHHHHhcCCCCcccccce----eccCCceE
Confidence 4688889999999999999999888899999997522 23578999999998 89999999998 88888899
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+|+||+ ++|+|.+++. +||.|+++++++.+||+|||+|+......
T Consensus 77 lv~E~~-~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 77 LVFEFM-EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp EEEECC-TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred EEEEec-CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCC
Confidence 999999 9999988772 79999999999999999999998775433
Q ss_pred Ce-eeecccCCCC------------cccchhhhhHHHHHHHhC-CCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 296 SN-LTLLAGTYGY------------EKCDVYSFGVVALEILMG-RQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 296 ~~-~~~~~gt~~y------------~k~DVySfGvvl~Elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.. .....||..| .|+|||||||++|||+|+ +.|+..... ......+.. ..+...
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~---------~~~~~~i~~-~~~~~~-- 223 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---------SEVVEDIST-GFRLYK-- 223 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH---------HHHHHHHHH-TCCCCC--
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH---------HHHHHHHHh-cCCCCC--
Confidence 22 2345788888 689999999999999995 544442111 001111111 111100
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCc--CCCccc
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTP--MQKPFH 391 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~ 391 (408)
+..+...+.+++..||+.||++| |++++.
T Consensus 224 -p~~~~~~l~~li~~cl~~~p~~Rps~~~il~ 254 (263)
T d1sm2a_ 224 -PRLASTHVYQIMNHCWKERPEDRPAFSRLLR 254 (263)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -ccccCHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 01223456788999999999999 444443
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-35 Score=267.36 Aligned_cols=195 Identities=15% Similarity=0.202 Sum_probs=144.7
Q ss_pred HhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
.++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++. +|+|+++++++ +.+ +..
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~----~~~-~~~ 82 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAV----VTQ-EPI 82 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECS-SSC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc----CCHHHHHHHHHHHHhCCCCCEeEEEee----ecc-CCe
Confidence 35788889999999999999999888899999997532 23578999999997 88888888877 654 446
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++|+||+ ++|+|.+++. +||.|+++++++++||+|||+|+....
T Consensus 83 ~iv~Ey~-~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 83 YIITEYM-ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (272)
T ss_dssp EEEEECC-TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEEeC-CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccC
Confidence 7899999 9999987652 899999999999999999999998754
Q ss_pred CCCe-eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 294 DSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 294 ~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.... .+...||+.| .|+|||||||++|||+||..|+..... ....+..+.. ..+.+.
T Consensus 162 ~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~--------~~~~~~~i~~-~~~~~~- 231 (272)
T d1qpca_ 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVIQNLER-GYRMVR- 231 (272)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHHT-TCCCCC-
T ss_pred CccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHh-cCCCCC-
Confidence 4322 2346788888 789999999999999997665432111 1111111111 111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+......+.+++..||+.||++|++
T Consensus 232 --p~~~~~~l~~li~~cl~~~P~~Rpt 256 (272)
T d1qpca_ 232 --PDNCPEELYQLMRLCWKERPEDRPT 256 (272)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred --cccChHHHHHHHHHHcCCCHhHCcC
Confidence 0122345678889999999999944
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-35 Score=267.09 Aligned_cols=199 Identities=21% Similarity=0.356 Sum_probs=142.0
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||+||+|++.+ .||||+++... .+....+.|.+|++++. +|+|+++++++ +.+ ...+
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~----~~~-~~~~ 79 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGY----STA-PQLA 79 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSS-CCTTHHHHHHHHHHHHTTCCCTTBCCEEEE----ECS-SSCE
T ss_pred ccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCEeeeeEE----Eec-cEEE
Confidence 567788999999999999998753 59999997543 33456788999999997 88888887776 554 4578
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++||+ ++|+|.+++. +||.|++++.++++||+|||+|+......
T Consensus 80 lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~ 158 (276)
T d1uwha_ 80 IVTQWC-EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 158 (276)
T ss_dssp EEEECC-CEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred EEEecC-CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence 999999 9999998873 79999999999999999999998765432
Q ss_pred C--eeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCc
Q 037624 296 S--NLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPP 358 (408)
Q Consensus 296 ~--~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 358 (408)
. ..+...||+.| .++|||||||++|||+||+.||......... ..........|.+.
T Consensus 159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~----~~~~~~~~~~p~~~-- 232 (276)
T d1uwha_ 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI----IFMVGRGYLSPDLS-- 232 (276)
T ss_dssp -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH----HHHHHHTSCCCCGG--
T ss_pred CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHH----HHHHhcCCCCCcch--
Confidence 2 23456788877 4789999999999999999999743211100 00000111122111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+...+.+++..||+.||++|++
T Consensus 233 --~~~~~~~~~l~~li~~cl~~dp~~RPt 259 (276)
T d1uwha_ 233 --KVRSNCPKAMKRLMAECLKKKRDERPL 259 (276)
T ss_dssp --GSCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred --hccccchHHHHHHHHHHcCCCHhHCcC
Confidence 111233456778889999999999954
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-35 Score=263.21 Aligned_cols=197 Identities=20% Similarity=0.268 Sum_probs=141.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeec--CCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCI--KDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~--~~~ 246 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++.... .+....+.|.+|++++. +|||+++++++ +. .+.
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~----~~~~~~~ 78 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYDR----IIDRTNT 78 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTT-SCHHHHHHHHHHHHHTTSCCCTTBCCEEEE----EEC----
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhh-CCHHHHHHHHHHHHHHHHCCCCCEeeEEEE----EEeCCCC
Confidence 6899999999999999999997 568999999997643 23345677999999996 77777777665 43 345
Q ss_pred cchhhhhhcccchhhhhhhc------------------------------------------cCccccccccCCceEEee
Q 037624 247 CFWFMNTWRGEACSVFCTMI------------------------------------------MKPLSWIGLRELEAFVAD 284 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~------------------------------------------~k~~~~~l~~~~~~ki~D 284 (408)
..+++|||+ ++|+|.+++. +||.|++++.++.+||+|
T Consensus 79 ~~~ivmEy~-~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~D 157 (269)
T d2java1 79 TLYIVMEYC-EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 157 (269)
T ss_dssp CEEEEEECC-TTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECC
T ss_pred EEEEEEecC-CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEee
Confidence 678999999 9999877651 689999999999999999
Q ss_pred cccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC
Q 037624 285 FGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 285 fGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
||+|+....+........||+.| .++|||||||++|||+||+.||..... ......+.+
T Consensus 158 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~---------~~~~~~i~~ 228 (269)
T d2java1 158 FGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---------KELAGKIRE 228 (269)
T ss_dssp HHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHHHHH
T ss_pred ccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH---------HHHHHHHHc
Confidence 99999876555455667899988 799999999999999999999864321 111122222
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....... . .....+.+++..||+.||++|++
T Consensus 229 ~~~~~~~-~---~~s~~l~~li~~~L~~dp~~Rps 259 (269)
T d2java1 229 GKFRRIP-Y---RYSDELNEIITRMLNLKDYHRPS 259 (269)
T ss_dssp TCCCCCC-T---TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCCCC-c---ccCHHHHHHHHHHcCCChhHCcC
Confidence 2221110 1 11234667888999999999954
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.7e-35 Score=266.53 Aligned_cols=196 Identities=19% Similarity=0.233 Sum_probs=149.6
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||+||+|++. +|+.||||+++... ...++|.+|+++|. +|+|+++++++ +.+++.
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~HpnIv~~~~~----~~~~~~ 87 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGV----CTREPP 87 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECSSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhCCCCCEecCCcc----EeeCCe
Confidence 457888899999999999999985 58899999987532 23578999999998 89999988888 888889
Q ss_pred chhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccC
Q 037624 248 FWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
.++++||+ ++|++..++. +||.|+++++++++||+|||+|+...
T Consensus 88 ~~iv~E~~-~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~ 166 (287)
T d1opja_ 88 FYIITEFM-TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166 (287)
T ss_dssp CEEEEECC-TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred eEEEeecc-cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecC
Confidence 99999999 9999888762 79999999999999999999999875
Q ss_pred CCCCee-eecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 293 CDSSNL-TLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 293 ~~~~~~-~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.+.... +...||..| .|+|||||||++|||+||..|+.... ....+.+.+......+.
T Consensus 167 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~---------~~~~~~~~i~~~~~~~~ 237 (287)
T d1opja_ 167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---------DLSQVYELLEKDYRMER 237 (287)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC---------CHHHHHHHHHTTCCCCC
T ss_pred CCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc---------hHHHHHHHHhcCCCCCC
Confidence 543332 334567766 68999999999999999877754221 11112233333222211
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. ......+.+++..||+.||++|++
T Consensus 238 ~---~~~~~~l~~li~~cl~~dP~~Rps 262 (287)
T d1opja_ 238 P---EGCPEKVYELMRACWQWNPSDRPS 262 (287)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred C---ccchHHHHHHHHHHcCCCHhHCcC
Confidence 1 123345778899999999999944
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-34 Score=260.23 Aligned_cols=198 Identities=19% Similarity=0.252 Sum_probs=147.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++..... ....+.|.+|++++. +|+|+++++++ +.++...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~~~~~----~~~~~~~ 78 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGH----RREGNIQ 78 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEE----EEETTEE
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCCCCCEeeEeee----eccCcee
Confidence 5799999999999999999998 4689999999975432 223467999999997 88888888887 7778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||||+ ++|+|.+++. +||.|+++++++++||+|||+|+......
T Consensus 79 ~ivmEy~-~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 79 YLFLEYC-SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp EEEEECC-TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEEEecc-CCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence 9999999 9999998883 79999999999999999999999875433
Q ss_pred C--eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 S--NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~--~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
. ..+..+||+.| .++||||+||++|||+||+.||....... ...............
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~--------~~~~~~~~~~~~~~~- 228 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--------QEYSDWKEKKTYLNP- 228 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS--------HHHHHHHTTCTTSTT-
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH--------HHHHHHhcCCCCCCc-
Confidence 2 23557899988 57999999999999999999996432111 011111121111110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+.+++..||+.||++|++
T Consensus 229 --~~~~s~~~~~li~~~L~~dP~~R~t 253 (271)
T d1nvra_ 229 --WKKIDSAPLALLHKILVENPSARIT 253 (271)
T ss_dssp --GGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcC
Confidence 0111234557788999999999965
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-34 Score=260.76 Aligned_cols=196 Identities=26% Similarity=0.362 Sum_probs=151.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+.. +|+.||||++......+....+.+.+|++++. +|||+++++++ +.++...
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~----~~~~~~~ 81 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY----FHDATRV 81 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE----EECSSEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEE----EEECCEE
Confidence 47999999999999999999984 58899999987543333344678999999997 88888888888 7788889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++|+||+ ++|+|.+++. +||.|+++++++.+||+|||+|+.....
T Consensus 82 ~ivmEy~-~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~- 159 (263)
T d2j4za1 82 YLILEYA-PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 159 (263)
T ss_dssp EEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-
T ss_pred EEEEeec-CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC-
Confidence 9999999 9999988873 8999999999999999999999876433
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......||+.| .++|||||||++|||+||+.||..... ......+.......+ .
T Consensus 160 -~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---------~~~~~~i~~~~~~~p--~-- 225 (263)
T d2j4za1 160 -RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---------QETYKRISRVEFTFP--D-- 225 (263)
T ss_dssp -CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHHHTTCCCCC--T--
T ss_pred -cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH---------HHHHHHHHcCCCCCC--c--
Confidence 23456788888 799999999999999999999964321 111222223222211 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..|++.||++|++.
T Consensus 226 -~~s~~~~~li~~~L~~dp~~R~t~ 249 (263)
T d2j4za1 226 -FVTEGARDLISRLLKHNPSQRPML 249 (263)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred -cCCHHHHHHHHHHccCCHhHCcCH
Confidence 112345678889999999999653
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-34 Score=262.32 Aligned_cols=198 Identities=16% Similarity=0.243 Sum_probs=148.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++......+....+.+.+|++++. +|+|+++++++ +.++...
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~----~~~~~~~ 83 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT----FQDDEKL 83 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEE----EECSSEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEE----EEECCEE
Confidence 5799999999999999999998 568999999997533222334577999999997 88888888877 7778889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ ++|+|.+++. +||.|+++++++.+||+|||+|+.+....
T Consensus 84 ~ivmEy~-~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 84 YFGLSYA-KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp EEEECCC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEEEcc-CCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence 9999999 9999988763 79999999999999999999999875432
Q ss_pred C--eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 296 S--NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 296 ~--~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
. .....+||+.| .++||||+||++|||+||+.||..... ......+....+..+ .
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------~~~~~~i~~~~~~~p--~ 231 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---------YLIFQKIIKLEYDFP--E 231 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHTTCCCCC--T
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH---------HHHHHHHHcCCCCCC--c
Confidence 2 23456899988 789999999999999999999964321 111222222222111 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
.....+.+++..||+.||++|++.
T Consensus 232 ---~~s~~~~~li~~~L~~dP~~R~t~ 255 (288)
T d1uu3a_ 232 ---KFFPKARDLVEKLLVLDATKRLGC 255 (288)
T ss_dssp ---TCCHHHHHHHHTTSCSSGGGSTTS
T ss_pred ---cCCHHHHHHHHHHccCCHhHCcCH
Confidence 112345678899999999999653
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-34 Score=264.06 Aligned_cols=203 Identities=17% Similarity=0.193 Sum_probs=141.4
Q ss_pred hhcccceeecccceeEEEEEEeCCC-----cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSS-----KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g-----~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
+.|+..++||+|+||+||+|.+.+. ..||||++.... ......+|.+|++++. +|+|+++++++ +..
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~H~nIv~~~g~----~~~ 80 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGV----ISK 80 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE----ECS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcCCCCEeeeeEE----Eec
Confidence 4688889999999999999998542 379999996532 3334567999999997 88888888888 888
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
....++++||+ .++++...+. +||.|++++.++++||+|||+|+.
T Consensus 81 ~~~~~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~ 159 (283)
T d1mqba_ 81 YKPMMIITEYM-ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 159 (283)
T ss_dssp SSSEEEEEECC-TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred CCceEEEEEec-ccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhc
Confidence 88889999999 7887766552 899999999999999999999998
Q ss_pred cCCCCCe---eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN---LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~---~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .....||+.| .|+|||||||++|||+||..|+.... ....+.+.+....
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~---------~~~~~~~~i~~~~ 230 (283)
T d1mqba_ 160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL---------SNHEVMKAINDGF 230 (283)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC---------CHHHHHHHHHTTC
T ss_pred ccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC---------CHHHHHHHHhccC
Confidence 7543222 2345678888 68999999999999999766643211 1111222222222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
+.+. +.++...+.+++..||+.||++| |.+++..+
T Consensus 231 ~~~~---~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L 267 (283)
T d1mqba_ 231 RLPT---PMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267 (283)
T ss_dssp CCCC---CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCC---chhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHH
Confidence 2211 12334567789999999999999 55554433
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-34 Score=260.72 Aligned_cols=193 Identities=19% Similarity=0.284 Sum_probs=149.7
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++. +|+|+++++++ +.++...+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~----~~~~~~~~Ev~~~~~l~HpnIv~~~g~----~~~~~~~~ 75 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLSHEKLVQLYGV----CTKQRPIF 75 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS----SCHHHHHHHHHHHHTCCCTTBCCEEEE----ECCSSSEE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc----CCHHHHHHHHHHHHhcCCCceeeEEEE----EeeCCceE
Confidence 5788899999999999999999888899999997532 23578999999997 89999998888 88888899
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+|+||+ ++|++..++. +||.|+++++++.+||+|||+++......
T Consensus 76 iv~Ey~-~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 154 (258)
T d1k2pa_ 76 IITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154 (258)
T ss_dssp EEEECC-TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred EEEEcc-CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence 999999 8898887752 78999999999999999999998765433
Q ss_pred Ce-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCC-CCCCccc
Q 037624 296 SN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDP-RLSPPVD 360 (408)
Q Consensus 296 ~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~ 360 (408)
.. .....||..| .|+|||||||++|||+| |+.||..... ......+.+. ++..+
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~---------~~~~~~i~~~~~~~~p-- 223 (258)
T d1k2pa_ 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN---------SETAEHIAQGLRLYRP-- 223 (258)
T ss_dssp CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH---------HHHHHHHHTTCCCCCC--
T ss_pred ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH---------HHHHHHHHhCCCCCCc--
Confidence 22 2345677777 79999999999999998 8999864321 1111122221 11111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+...+.+++..||+.||++|++
T Consensus 224 ---~~~~~~l~~li~~cl~~dP~~RPt 247 (258)
T d1k2pa_ 224 ---HLASEKVYTIMYSCWHEKADERPT 247 (258)
T ss_dssp ---TTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred ---ccccHHHHHHHHHHccCCHhHCcC
Confidence 122345778899999999999954
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-34 Score=260.01 Aligned_cols=197 Identities=18% Similarity=0.275 Sum_probs=151.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|++++. +|+|+++++++ +..++..
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~----~~~~~~~ 92 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDS----YLVGDEL 92 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhCCCCCEeeEeEE----EEECCEE
Confidence 4688899999999999999997 56999999999754322 3567999999997 88888888887 6777888
Q ss_pred hhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++||||+ ++|+|..++. +||.|++++.++++||+|||+|+.+..+..
T Consensus 93 ~ivmEy~-~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 171 (293)
T d1yhwa1 93 WVVMEYL-AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (293)
T ss_dssp EEEEECC-TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EEEEEec-CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccc
Confidence 9999999 9999987762 899999999999999999999998766555
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
.....+||+.| .++|||||||++|||+||+.||......... .....--.+.+..+ .
T Consensus 172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~~~~~~~~~~~~~-----~ 240 (293)
T d1yhwa1 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL------YLIATNGTPELQNP-----E 240 (293)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHHCSCCCSSG-----G
T ss_pred cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH------HHHHhCCCCCCCCc-----c
Confidence 55667899988 7899999999999999999999643211100 00011111122111 1
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 241 ~~s~~~~~li~~~L~~dP~~R~s 263 (293)
T d1yhwa1 241 KLSAIFRDFLNRCLDMDVEKRGS 263 (293)
T ss_dssp GSCHHHHHHHHHHTCSSTTTSCC
T ss_pred cCCHHHHHHHHHHccCChhHCcC
Confidence 22334667888999999999954
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-34 Score=261.39 Aligned_cols=194 Identities=23% Similarity=0.304 Sum_probs=148.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||++... .....+.|.+|+++|. +|+|+++++++ +..++..
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~~~----~~~~~~~ 84 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDA----FYYENNL 84 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---SSGGGGGTHHHHHHHHHCCCTTBCCEEEE----EEETTEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEE----EeeCCeE
Confidence 4588889999999999999998 46889999999753 2345678999999997 88888888888 7778888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++||||+ ++|+|..++. +||.|++++.++++||+|||+|+.....
T Consensus 85 ~lvmEy~-~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 85 WILIEFC-AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp EEEEECC-TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred EEEEecC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence 9999999 9999987752 7999999999999999999999875433
Q ss_pred CCeeeecccCCCC-----------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC---CC
Q 037624 295 SSNLTLLAGTYGY-----------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD---PR 354 (408)
Q Consensus 295 ~~~~~~~~gt~~y-----------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d---~~ 354 (408)
........||+.| .|+|||||||++|||+||+.||....... .+..+.. +.
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~---------~~~~i~~~~~~~ 234 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR---------VLLKIAKSEPPT 234 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---------HHHHHHHSCCCC
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH---------HHHHHHcCCCCC
Confidence 2223456788877 57899999999999999999986432211 1122221 12
Q ss_pred CCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 355 LSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 355 l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.. +......+.+++..||+.||++|++
T Consensus 235 ~~~-----~~~~s~~~~~li~~~L~~dp~~R~t 262 (288)
T d2jfla1 235 LAQ-----PSRWSSNFKDFLKKCLEKNVDARWT 262 (288)
T ss_dssp CSS-----GGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCc-----cccCCHHHHHHHHHHccCChhHCcC
Confidence 211 1122345667888999999999954
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-34 Score=260.90 Aligned_cols=203 Identities=17% Similarity=0.204 Sum_probs=147.4
Q ss_pred hhccccee-ecccceeEEEEEEeC---CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYC-FGTGGYGSVYIAQLT---SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~-iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|...+. ||+|+||+||+|.+. ++..||||+++.. .+....++|.+|+++|. +|+|+++++++ +..+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~g~----~~~~ 81 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGV----CQAE 81 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE----EESS
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh--cCHHHHHHHHHHHHHHHhCCCCCEeeEeee----eccC
Confidence 45666664 999999999999873 3557999999753 23445678999999997 88998888887 6544
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++|+||+ ++|+|.+++. +||.|++++.++.+||+|||+|+..
T Consensus 82 -~~~lvmE~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 82 -ALMLVMEMA-GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 159 (285)
T ss_dssp -SEEEEEECC-TTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred -eEEEEEEeC-CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcc
Confidence 467999999 9999988762 7999999999999999999999987
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....||+.| .|+|||||||++|||+| |+.||...... .....+.. ..
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---------~~~~~i~~-~~ 229 (285)
T d1u59a_ 160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---------EVMAFIEQ-GK 229 (285)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---------HHHHHHHT-TC
T ss_pred cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---------HHHHHHHc-CC
Confidence 6543322 345678777 68999999999999998 99998743211 11111111 11
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccccch
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEISI 395 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~~~ 395 (408)
+.+. +..+...+.+++..||+.+|++| |.+++..++.
T Consensus 230 ~~~~---p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~ 268 (285)
T d1u59a_ 230 RMEC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 268 (285)
T ss_dssp CCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCC---CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111 11233456788999999999999 4444444443
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-33 Score=253.42 Aligned_cols=198 Identities=17% Similarity=0.236 Sum_probs=145.3
Q ss_pred ccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 175 DIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 175 ~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
...+.||+|+||+||+|+.. +++.||+|++.... ......+.|.+|+++|. +|+|++++++++......+...+++
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 44567999999999999984 58899999997643 23345678999999997 8888888887744333345678899
Q ss_pred hhhcccchhhhhhhc-----------------------------------cCccccccc-cCCceEEeecccccccCCCC
Q 037624 252 NTWRGEACSVFCTMI-----------------------------------MKPLSWIGL-RELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~-~~~~~ki~DfGla~~~~~~~ 295 (408)
|||+ ++|+|.+++. +||.|++++ +++.+||+|||+|+....
T Consensus 91 mE~~-~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~-- 167 (270)
T d1t4ha_ 91 TELM-TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-- 167 (270)
T ss_dssp EECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT--
T ss_pred EeCC-CCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC--
Confidence 9999 9999988873 789999996 589999999999987533
Q ss_pred CeeeecccCCCC-----------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhHH
Q 037624 296 SNLTLLAGTYGY-----------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVV 364 (408)
Q Consensus 296 ~~~~~~~gt~~y-----------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 364 (408)
......+||+.| .++|||||||++|||+||+.||...... ..+...+.....+. ....
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~---------~~~~~~i~~~~~~~--~~~~ 236 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA---------AQIYRRVTSGVKPA--SFDK 236 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---------HHHHHHHTTTCCCG--GGGG
T ss_pred CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccH---------HHHHHHHHcCCCCc--ccCc
Confidence 234567899999 7899999999999999999999632111 11111111111111 1111
Q ss_pred HHHHHHHHHHHhhccCCCCCcCC
Q 037624 365 RDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 365 ~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..||+.||++|++
T Consensus 237 ~~~~~~~~li~~~l~~dp~~R~s 259 (270)
T d1t4ha_ 237 VAIPEVKEIIEGCIRQNKDERYS 259 (270)
T ss_dssp CCCHHHHHHHHHHSCSSGGGSCC
T ss_pred cCCHHHHHHHHHHccCCHhHCcC
Confidence 22334668889999999999965
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-34 Score=259.44 Aligned_cols=190 Identities=17% Similarity=0.229 Sum_probs=138.6
Q ss_pred eeecccceeEEEEEEeCC---CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhhh
Q 037624 178 YCFGTGGYGSVYIAQLTS---SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFMN 252 (408)
Q Consensus 178 ~~iG~G~~G~Vy~~~~~~---g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv~ 252 (408)
+.||+|+||+||+|.+.+ ++.||||+++... .+....++|.+|+++|. +|+|+++++++ |..+ ..++|+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~g~----~~~~-~~~lvm 86 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGI----CEAE-SWMLVM 86 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEE----EESS-SEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCCCCCCceEEEE----eccC-CEEEEE
Confidence 579999999999998743 4689999997533 33455678999999997 88888888777 6544 467899
Q ss_pred hhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCee-
Q 037624 253 TWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL- 298 (408)
Q Consensus 253 e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~- 298 (408)
||+ ++|+|.+++. +||.|++++.++.+||+|||+|+.........
T Consensus 87 E~~-~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 165 (277)
T d1xbba_ 87 EMA-ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165 (277)
T ss_dssp ECC-TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred EcC-CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence 999 9999988873 79999999999999999999999875543332
Q ss_pred --eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 299 --TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 299 --~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....||+.| .++|||||||++|||+| |+.||...... .+...+....+.+. +
T Consensus 166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~----------~~~~~i~~~~~~~~---p 232 (277)
T d1xbba_ 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----------EVTAMLEKGERMGC---P 232 (277)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----------HHHHHHHTTCCCCC---C
T ss_pred cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH----------HHHHHHHcCCCCCC---C
Confidence 345788888 79999999999999998 89998643211 11122211111111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+...+.+++..||+.||++|++
T Consensus 233 ~~~~~~~~~li~~cl~~dp~~RPs 256 (277)
T d1xbba_ 233 AGCPREMYDLMNLCWTYDVENRPG 256 (277)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred cccCHHHHHHHHHHcCCCHhHCcC
Confidence 123345678899999999999944
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.3e-33 Score=263.58 Aligned_cols=197 Identities=19% Similarity=0.245 Sum_probs=153.5
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+. .+|+.||||++++.........+.+.+|+++|. +|+|++++.++ +.++...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~----~~~~~~~ 80 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA----FQTHDRL 80 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEE----EECSSEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEee----ecccccc
Confidence 5799999999999999999997 569999999997543222334677899999997 78888888887 7888889
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++|+||+ ++|+|..++. +||.|+++++++++||+|||+|+......
T Consensus 81 ~iv~ey~-~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 81 CFVMEYA-NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEEEECC-TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred ccceecc-CCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 9999999 9999988773 89999999999999999999999876555
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
......+||+.| .++||||+||++|||+||+.||..... ......+....+..+. .
T Consensus 160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~---------~~~~~~i~~~~~~~p~-~-- 227 (337)
T d1o6la_ 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---------ERLFELILMEEIRFPR-T-- 227 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCCT-T--
T ss_pred cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH---------HHHHHHHhcCCCCCCc-c--
Confidence 555667899988 799999999999999999999864321 1111222222222111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcCC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+++..|++.||++|++
T Consensus 228 --~s~~~~dli~~~L~~dP~~R~~ 249 (337)
T d1o6la_ 228 --LSPEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp --SCHHHHHHHHHHTCSSTTTSTT
T ss_pred --CCHHHHHHHHhhccCCchhhcc
Confidence 1223567888999999999964
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=3.6e-34 Score=264.25 Aligned_cols=204 Identities=17% Similarity=0.206 Sum_probs=151.6
Q ss_pred HHHHHHHhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeee
Q 037624 165 GDIIEATEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLS 236 (408)
Q Consensus 165 ~~l~~at~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~ 236 (408)
.+++...++|+..+.||+|+||+||+|+.. +++.||||+++.. ......++|.+|++++. +|+|++++.+
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~ 83 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLG 83 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh--cChHHHHHHHHHHHHHHhcCCCCccccee
Confidence 344556788999999999999999999863 4578999999753 23345678999999997 8888888888
Q ss_pred EeEeeecCCccchhhhhhcccchhhhhhhc--------------------------------------------------
Q 037624 237 FMDFVCIKDACFWFMNTWRGEACSVFCTMI-------------------------------------------------- 266 (408)
Q Consensus 237 ~~~~~~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------------- 266 (408)
+ +......++++||+ ++|+|.+++.
T Consensus 84 ~----~~~~~~~~~v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~ 158 (301)
T d1lufa_ 84 V----CAVGKPMCLLFEYM-AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 158 (301)
T ss_dssp E----ECSSSSCEEEEECC-TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred e----eccCCceEEEEEec-CCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc
Confidence 8 88888899999999 8988887651
Q ss_pred -------cCccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHhC
Q 037624 267 -------MKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILMG 325 (408)
Q Consensus 267 -------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Elltg 325 (408)
+||.|++++.++++||+|||+|+........ .+...||+.| .|+|||||||++|||+||
T Consensus 159 ~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~ 238 (301)
T d1lufa_ 159 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 238 (301)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHcc
Confidence 7999999999999999999999876443222 2345677777 699999999999999998
Q ss_pred C-CCCcccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCCC
Q 037624 326 R-QPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQK 388 (408)
Q Consensus 326 ~-~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~ 388 (408)
. .||.... ....+..+.+..... . +...+..+.+++..||+.+|++|+++
T Consensus 239 ~~~p~~~~~---------~~e~~~~v~~~~~~~-~---p~~~~~~~~~li~~cl~~~P~~RPt~ 289 (301)
T d1lufa_ 239 GLQPYYGMA---------HEEVIYYVRDGNILA-C---PENCPLELYNLMRLCWSKLPADRPSF 289 (301)
T ss_dssp TCCTTTTSC---------HHHHHHHHHTTCCCC-C---CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCCCC---------HHHHHHHHHcCCCCC-C---CccchHHHHHHHHHHcCCChhHCcCH
Confidence 6 5665321 111122333322221 1 11233457789999999999999543
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=9.4e-34 Score=258.60 Aligned_cols=194 Identities=16% Similarity=0.233 Sum_probs=137.9
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|...+.||+|+||.||+|++.+++.||||+++... ...++|.+|+.++. +|+|+++++++ +.+ +..+
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~----~~~~~~~~E~~~l~~l~h~nIv~~~g~----~~~-~~~~ 87 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAV----VSE-EPIY 87 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEE----ECS-SSCE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc----CCHHHHHHHHHHHHhcccCCEeEEEEE----Eec-CCeE
Confidence 5789999999999999999999888899999997532 23578999999997 88888888777 654 4578
Q ss_pred hhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 250 FMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
+|+||+ ++|++..++. +||.|+++++++++||+|||+|+.....
T Consensus 88 lv~Ey~-~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 88 IVTEYM-SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 166 (285)
T ss_dssp EEECCC-TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred EEEEec-CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCC
Confidence 999999 8888876652 7999999999999999999999876533
Q ss_pred CC-eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccch
Q 037624 295 SS-NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDR 361 (408)
Q Consensus 295 ~~-~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 361 (408)
.. ..+...||+.| .++|||||||++|||+||..|+...... .. +...+......+.
T Consensus 167 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~--------~~-~~~~i~~~~~~~~-- 235 (285)
T d1fmka3 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------RE-VLDQVERGYRMPC-- 235 (285)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HH-HHHHHHTTCCCCC--
T ss_pred CceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH--------HH-HHHHHHhcCCCCC--
Confidence 32 23446788888 7899999999999999977665422110 10 1111111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 362 MVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 362 ~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+...+.+++..||+.||++|++
T Consensus 236 -~~~~~~~l~~li~~cl~~dP~~Rps 260 (285)
T d1fmka3 236 -PPECPESLHDLMCQCWRKEPEERPT 260 (285)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred -CcccCHHHHHHHHHHcccCHhHCcC
Confidence 1122345678899999999999944
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=1.6e-33 Score=260.10 Aligned_cols=193 Identities=18% Similarity=0.244 Sum_probs=147.2
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|+..+.||+|+||+||+|+. .+|+.||||++......+....+.|.+|+++|. +|+|+++++++ +.++..
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~----~~~~~~ 89 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC----YLREHT 89 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEE----EEETTE
T ss_pred HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEE----EEECCE
Confidence 34589999999999999999997 568899999997654444445678999999997 88888888887 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++++||+ ++|++..++. +||.|+++++++++||+|||+|+.....
T Consensus 90 ~~iv~E~~-~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~ 168 (309)
T d1u5ra_ 90 AWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (309)
T ss_dssp EEEEEECC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEEEEEec-CCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC
Confidence 99999999 8888765541 8999999999999999999999876432
Q ss_pred CCeeeecccCCCC---------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc---CCCCC
Q 037624 295 SSNLTLLAGTYGY---------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL---DPRLS 356 (408)
Q Consensus 295 ~~~~~~~~gt~~y---------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---d~~l~ 356 (408)
....||+.| .++|||||||++|||+||+.||...... ..+..+. .+.+.
T Consensus 169 ----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~---------~~~~~i~~~~~~~~~ 235 (309)
T d1u5ra_ 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---------SALYHIAQNESPALQ 235 (309)
T ss_dssp ----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---------HHHHHHHHSCCCCCS
T ss_pred ----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhCCCCCCC
Confidence 235688777 5799999999999999999998643211 1111221 12222
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. . .....+.+++..||+.||++|++
T Consensus 236 ~---~---~~s~~~~~li~~~L~~dP~~Rpt 260 (309)
T d1u5ra_ 236 S---G---HWSEYFRNFVDSCLQKIPQDRPT 260 (309)
T ss_dssp C---T---TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred C---C---CCCHHHHHHHHHHCcCChhHCcC
Confidence 1 1 11234667888999999999954
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.5e-33 Score=257.35 Aligned_cols=195 Identities=18% Similarity=0.266 Sum_probs=150.1
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|...+.||+|+||+||+|+.. +|+.||||+++..........+.+..|..++. +|||+++++++ +.++..
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~----~~~~~~ 77 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT----FQTKEN 77 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEE----EECSSE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEE----EccCCc
Confidence 57899999999999999999984 68999999997532222233566778877654 88888888888 788888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
.++|+||+ ++|+|..++. +||.|+++++++++||+|||+|+.....
T Consensus 78 ~yivmEy~-~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 78 LFFVMEYL-NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred eeEEEeec-CCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence 99999999 9999998883 7999999999999999999999977655
Q ss_pred CCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhcc--CCCCCCccc
Q 037624 295 SSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVL--DPRLSPPVD 360 (408)
Q Consensus 295 ~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~ 360 (408)
....+...||+.| .++|||||||++|||+||+.||...... .....+. .+....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~---------~~~~~i~~~~~~~p~--- 224 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---------ELFHSIRMDNPFYPR--- 224 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCCT---
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH---------HHHHHHHcCCCCCCc---
Confidence 5555667899888 7999999999999999999999643211 1111111 122211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+.+++..|++.||++|++
T Consensus 225 ----~~s~~~~dli~~~L~~dP~~R~s 247 (320)
T d1xjda_ 225 ----WLEKEAKDLLVKLFVREPEKRLG 247 (320)
T ss_dssp ----TSCHHHHHHHHHHSCSSGGGSBT
T ss_pred ----cCCHHHHHHHHHhcccCCCCCcC
Confidence 11233568888999999999944
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.1e-33 Score=261.71 Aligned_cols=198 Identities=16% Similarity=0.247 Sum_probs=146.9
Q ss_pred HhhcccceeecccceeEEEEEEeCC-C-----cEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLTS-S-----KVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~~-g-----~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.++|+..+.||+|+||+||+|+... + ..||||++.... +....+.|.+|+.++. +|+|+++++++
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~---- 109 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGA---- 109 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEE----
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEE----
Confidence 3678899999999999999998732 2 369999986532 2334578999999885 78898888888
Q ss_pred ecCCccchhhhhhcccchhhhhhh--------------------------------------------------------
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTM-------------------------------------------------------- 265 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l-------------------------------------------------------- 265 (408)
+...+..++|+||+ ++|+|.+++
T Consensus 110 ~~~~~~~~lv~Ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHR 188 (325)
T d1rjba_ 110 CTLSGPIYLIFEYC-CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 188 (325)
T ss_dssp ECSSSSCEEEEECC-TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EeeCCeEEEEEEcC-CCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 88888899999999 999987764
Q ss_pred ccCccccccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCc
Q 037624 266 IMKPLSWIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGE 330 (408)
Q Consensus 266 ~~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~ 330 (408)
++||.|++++.++++||+|||+|+........ .....||+.| .++|||||||++|||+| |+.||.
T Consensus 189 DlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~ 268 (325)
T d1rjba_ 189 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 268 (325)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred cCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCC
Confidence 17999999999999999999999987554432 2346688888 68999999999999998 899986
Q ss_pred ccccccCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 331 LLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.... ...+..++....+.+. +..+...+.+++..||+.||++|++
T Consensus 269 ~~~~---------~~~~~~~~~~~~~~~~---p~~~~~~l~~li~~cl~~dP~~RPt 313 (325)
T d1rjba_ 269 GIPV---------DANFYKLIQNGFKMDQ---PFYATEEIYIIMQSCWAFDSRKRPS 313 (325)
T ss_dssp TCCC---------SHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCH---------HHHHHHHHhcCCCCCC---CCcCCHHHHHHHHHHcCCChhHCcC
Confidence 4321 1112233322222211 1122345778889999999999954
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-32 Score=253.25 Aligned_cols=217 Identities=18% Similarity=0.301 Sum_probs=148.5
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeeecCC--
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVCIKD-- 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~~~-- 245 (408)
++|...+.||+|+||+||+|++ +|+.||||+++.. ..+++.+|.+++. +|+|+++++++ |...
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~------~~~~~~~e~ei~~~~~~~HpnIv~~~~~----~~~~~~ 71 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAA----DNKDNG 71 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEE----EEEECS
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc------chhHHHHHHHHHHHhhCCCCcCcceEEE----EEeCCC
Confidence 4577788999999999999998 6889999998642 2345555555543 78888887777 5433
Q ss_pred --ccchhhhhhcccchhhhhhhc----------------------------------------cCccccccccCCceEEe
Q 037624 246 --ACFWFMNTWRGEACSVFCTMI----------------------------------------MKPLSWIGLRELEAFVA 283 (408)
Q Consensus 246 --~~~~lv~e~~~~~g~l~~~l~----------------------------------------~k~~~~~l~~~~~~ki~ 283 (408)
...++|+||+ ++|+|..++. +||.|+++++++++||+
T Consensus 72 ~~~~~~lv~Ey~-~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~ 150 (303)
T d1vjya_ 72 TWTQLWLVSDYH-EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp SSEEEEEEEECC-TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred cceEEEEEEecc-cCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEE
Confidence 3578999999 9999988873 78899999999999999
Q ss_pred ecccccccCCCCCe----eeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCc--
Q 037624 284 DFGMTMHLYCDSSN----LTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSS-- 339 (408)
Q Consensus 284 DfGla~~~~~~~~~----~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~-- 339 (408)
|||+++........ .....||++| .|+|||||||+||||+||+.|+..........
T Consensus 151 DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~ 230 (303)
T d1vjya_ 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred ecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhh
Confidence 99999987554332 2356789888 37899999999999999998875332211100
Q ss_pred ----cccccchhhhccCCCCCCcc--chhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHhh
Q 037624 340 ----SSDQNIMLLDVLDPRLSPPV--DRMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRN 400 (408)
Q Consensus 340 ----~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~~ 400 (408)
............+..++++. .....+.+..+.+++..||+.||++|++.....-.+.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 297 (303)
T d1vjya_ 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 00001111122333333211 12234566778899999999999999553333334445543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.4e-33 Score=256.95 Aligned_cols=152 Identities=23% Similarity=0.268 Sum_probs=128.6
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.++|+..+.||+|+||+||+|+. .+|+.||+|+++... +....+.+.+|+++|. +|||+++++++ +.++..
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~----~~~~~~ 78 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGA----FYSDGE 78 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCCCTTBCCEEEE----EECSSE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCCCCCCCcEEEE----EEECCE
Confidence 57899999999999999999997 568999999997532 3345678999999997 78888888887 778888
Q ss_pred chhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 248 FWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
.++|+||+ ++|+|..++. +||.|+++++++++||+|||+|+....
T Consensus 79 ~~iVmEy~-~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 79 ISICMEHM-DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EEEEEECC-TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEEEEcC-CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence 99999999 9999988772 899999999999999999999997643
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. ..++.+||..| .++||||+||+++||+||+.||..
T Consensus 158 ~--~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~ 205 (322)
T d1s9ja_ 158 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205 (322)
T ss_dssp H--TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred C--ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2 23456899999 799999999999999999999853
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.2e-33 Score=249.71 Aligned_cols=204 Identities=16% Similarity=0.238 Sum_probs=140.6
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC-Cccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-DACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-~~~~ 248 (408)
++|+..+.||+|+||.||+|++ .|+.||||+++.. ...++|.+|++++. +|+|+++++++ |.+ ....
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~----~~~~~~~~ 76 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGV----IVEEKGGL 76 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEE----ECCC--CC
T ss_pred HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH-----HHHHHHHHHHHHHHhCCCCCEeeEEEE----EEecCCcE
Confidence 5688889999999999999999 4778999999642 23578999999997 78888887776 644 4567
Q ss_pred hhhhhhcccchhhhhhhc-----------------------------------cCccccccccCCceEEeecccccccCC
Q 037624 249 WFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYC 293 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~ 293 (408)
++|+||+ ++|+|.+++. ++|.|++++.++++|++|||+++....
T Consensus 77 ~lv~ey~-~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 77 YIVTEYM-AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp EEEECCC-TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EEEEecc-CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC
Confidence 8999999 9999998873 789999999999999999999987643
Q ss_pred CCCeeeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 294 DSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 294 ~~~~~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
.. ....+|..| .++|||||||++|||+| |+.|+...... .+...+....+.+..
T Consensus 156 ~~---~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~----------~~~~~i~~~~~~~~~ 222 (262)
T d1byga_ 156 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----------DVVPRVEKGYKMDAP 222 (262)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----------GHHHHHTTTCCCCCC
T ss_pred CC---ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH----------HHHHHHHcCCCCCCC
Confidence 22 234566666 79999999999999999 67776532111 111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCCCcccccchHHHhhhc
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQKPFHEISISELRNQE 402 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~~~~~~~~~~~~~~~~ 402 (408)
. .....+.+++..||+.||++|+++....-.++++++++
T Consensus 223 ~---~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~~ 261 (262)
T d1byga_ 223 D---GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 261 (262)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred c---cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhCC
Confidence 1 22345668889999999999955443333455666655
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.4e-33 Score=254.62 Aligned_cols=198 Identities=16% Similarity=0.216 Sum_probs=136.0
Q ss_pred hhcccceeecccceeEEEEEEeC--CC--cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT--SS--KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~--~g--~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||+||+|++. ++ ..||||+++.....+....++|.+|++++. +|+|+++++++ +.++
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~----~~~~ 83 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV----VLTP 83 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEE----ECSS
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEE----Eeec
Confidence 57888999999999999999863 23 378999997654445556678999999997 88888888887 6554
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..++++||+ ++|++.+++. +||.|++++.++++||+|||+++..
T Consensus 84 -~~~lv~e~~-~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~ 161 (273)
T d1u46a_ 84 -PMKMVTELA-PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161 (273)
T ss_dssp -SCEEEEECC-TTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred -chheeeeee-cCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhc
Confidence 567899999 8888876652 7999999999999999999999987
Q ss_pred CCCCCee---eecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 292 YCDSSNL---TLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 292 ~~~~~~~---~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... ....||..| .++|||||||++|||+| |+.||..... ...+..+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~---------~~~~~~i~~~~~ 232 (273)
T d1u46a_ 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---------SQILHKIDKEGE 232 (273)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---------HHHHHHHHTSCC
T ss_pred ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH---------HHHHHHHHhCCC
Confidence 5543322 334567666 68999999999999998 8999864321 111223332222
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+.. ......+.+++..||+.||++|++
T Consensus 233 ~~~~~---~~~~~~l~~li~~cl~~dp~~RPt 261 (273)
T d1u46a_ 233 RLPRP---EDCPQDIYNVMVQCWAHKPEDRPT 261 (273)
T ss_dssp CCCCC---TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCc---ccccHHHHHHHHHHcCCChhHCcC
Confidence 22111 122345678899999999999954
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=1.1e-32 Score=254.37 Aligned_cols=199 Identities=19% Similarity=0.289 Sum_probs=132.4
Q ss_pred HhhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCcc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~ 247 (408)
.+.|+..+.||+|+||+||+|+.. +|+.||||++...... .....+.+|+++|. +|||+++++++ +.++..
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~----~~~~~~ 81 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIKHPNIVALDDI----YESGGH 81 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEE----EECSSE
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhCCCCCCCcEEEE----EEECCE
Confidence 356889999999999999999984 6889999999754322 22456889999997 88888888877 777888
Q ss_pred chhhhhhcccchhhhhhhc---------------------------------cCccccccc---cCCceEEeeccccccc
Q 037624 248 FWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL---RELEAFVADFGMTMHL 291 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~---~~~~~ki~DfGla~~~ 291 (408)
.++++||+ ++|+|.+++. +||.|+++. +++.+||+|||+|+..
T Consensus 82 ~~lvmE~~-~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 82 LYLIMQLV-SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEEEECCC-CSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEEEecc-CCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999 9999998872 789999885 5789999999999876
Q ss_pred CCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 292 YCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 292 ~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
.... .....+||+.| .++|||||||++|||+||+.||..... ......+.......+.
T Consensus 161 ~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------~~~~~~i~~~~~~~~~ 230 (307)
T d1a06a_ 161 DPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND---------AKLFEQILKAEYEFDS 230 (307)
T ss_dssp -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------HHHHHHHHTTCCCCCT
T ss_pred cCCC-eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH---------HHHHHHHhccCCCCCC
Confidence 4332 33456799998 799999999999999999999964321 1111222222221110
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 231 -~~~~~~s~~~~~li~~~L~~dP~~R~s 257 (307)
T d1a06a_ 231 -PYWDDISDSAKDFIRHLMEKDPEKRFT 257 (307)
T ss_dssp -TTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred -ccccCCCHHHHHHHHHHccCCHhHCcC
Confidence 111122234668889999999999954
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.7e-33 Score=257.37 Aligned_cols=202 Identities=19% Similarity=0.212 Sum_probs=150.6
Q ss_pred HhhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~ 242 (408)
.++|...+.||+|+||+||+|++. +++.||||+++.. ........|.+|++++. .|+|++++.++ +
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~~~~~----~ 92 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRLLGV----V 92 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGCCCTTBCCEEEE----E
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc--cChHHHHHHHHHHHHHHHcCCCCEeeeeeE----E
Confidence 367888999999999999999873 3578999999753 23344567999999997 88888888888 8
Q ss_pred cCCccchhhhhhcccchhhhhhhc-------------------------------------------cCccccccccCCc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI-------------------------------------------MKPLSWIGLRELE 279 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------~k~~~~~l~~~~~ 279 (408)
..+...++++||+ ++|++..++. +|+.|++++++++
T Consensus 93 ~~~~~~~lv~e~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~ 171 (308)
T d1p4oa_ 93 SQGQPTLVIMELM-TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 171 (308)
T ss_dssp CSSSSCEEEEECC-TTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred ecCCceeEEEeec-CCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCce
Confidence 8888899999999 9998887652 7899999999999
Q ss_pred eEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHhCC-CCCcccccccCCcccccc
Q 037624 280 AFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILMGR-QPGELLSSLSSSSSSDQN 344 (408)
Q Consensus 280 ~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Elltg~-~p~~~~~~~~~~~~~~~~ 344 (408)
+||+|||+|+......... ....||+.| .++|||||||++|||+||+ .|+.... ..
T Consensus 172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~---------~~ 242 (308)
T d1p4oa_ 172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---------NE 242 (308)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---------HH
T ss_pred EEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC---------HH
Confidence 9999999999775443322 334577777 6899999999999999985 5664321 11
Q ss_pred chhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 345 IMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 345 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
..+..+.+...... +..+...+.+++..||+.+|++| |.+++..
T Consensus 243 ~~~~~i~~~~~~~~----p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 288 (308)
T d1p4oa_ 243 QVLRFVMEGGLLDK----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288 (308)
T ss_dssp HHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhCCCCCC----cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 22333334332211 11233457788999999999999 5454443
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.2e-32 Score=253.32 Aligned_cols=193 Identities=20% Similarity=0.216 Sum_probs=149.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++..........+.+.+|+.++. +|||+++++++ +.++...
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~----~~~~~~~ 79 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGT----FQDAQQI 79 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEE----EECSSEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeee----EeeCCee
Confidence 5799999999999999999998 568999999997533222334678999999997 88888888887 7788899
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++|+||+ ++|++..++. +||.|++++.++++||+|||+|+.....
T Consensus 80 ~ivmE~~-~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~- 157 (316)
T d1fota_ 80 FMIMDYI-EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 157 (316)
T ss_dssp EEEECCC-CSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred eeEeeec-CCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc-
Confidence 9999999 8888877662 8999999999999999999999986432
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
....+||+.| .++||||+||++|||+||+.||..... ......+.......+ .
T Consensus 158 --~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~---------~~~~~~i~~~~~~~p--~-- 222 (316)
T d1fota_ 158 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT---------MKTYEKILNAELRFP--P-- 222 (316)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------HHHHHHHHHCCCCCC--T--
T ss_pred --cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH---------HHHHHHHHcCCCCCC--C--
Confidence 3457899998 789999999999999999999964321 111222222222211 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....+.+++..|++.||++|+
T Consensus 223 -~~s~~~~~li~~~L~~dp~~R~ 244 (316)
T d1fota_ 223 -FFNEDVKDLLSRLITRDLSQRL 244 (316)
T ss_dssp -TSCHHHHHHHHHHTCSCTTTCT
T ss_pred -CCCHHHHHHHHHHhhhCHHhcc
Confidence 1122356788899999999994
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.3e-32 Score=247.69 Aligned_cols=200 Identities=18% Similarity=0.213 Sum_probs=150.3
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCC---CcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENE---EPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~---~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||++...... .....+.|.+|+++|. +|+|+++++++ +.++
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~----~~~~ 85 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV----YENK 85 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE----EECS
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEE----EEEC
Confidence 5689999999999999999998 56899999999754322 2234678999999997 88888888888 7888
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCC----ceEEeecccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLREL----EAFVADFGMT 288 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~----~~ki~DfGla 288 (408)
...++|+||+ ++|+|.+++. +||.|++++.++ .+|++|||+|
T Consensus 86 ~~~~iv~E~~-~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 86 TDVILILELV-AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp SEEEEEEECC-CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CEEEEEEEcC-CCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence 8899999999 9999998873 789999998665 5999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
+...... ......||+.| .++|||||||++|||+||+.||..... ...+..+......
T Consensus 165 ~~~~~~~-~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------~~~~~~i~~~~~~ 234 (293)
T d1jksa_ 165 HKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------QETLANVSAVNYE 234 (293)
T ss_dssp EECTTSC-BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHTTCCC
T ss_pred hhcCCCc-cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH---------HHHHHHHHhcCCC
Confidence 8875432 23445677777 799999999999999999999864221 1112222222222
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+. .........+.+++..||+.||++|++
T Consensus 235 ~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s 264 (293)
T d1jksa_ 235 FED-EYFSNTSALAKDFIRRLLVKDPKKRMT 264 (293)
T ss_dssp CCH-HHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred CCc-hhcCCCCHHHHHHHHHHccCChhHCcC
Confidence 110 112223345668889999999999954
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=4.1e-32 Score=246.76 Aligned_cols=200 Identities=20% Similarity=0.210 Sum_probs=151.0
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCc------chhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEP------ASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~------~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++........ ...+.+.+|+.++. .|+|+++++++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~---- 78 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT---- 78 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE----
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee----
Confidence 5789999999999999999997 5689999999976432221 12346889999987 48999988888
Q ss_pred ecCCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla 288 (408)
+.+++..++++||+ ++|+|.+++. +||.|++++.++.+||+|||++
T Consensus 79 ~~~~~~~~ivmE~~-~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a 157 (277)
T d1phka_ 79 YETNTFFFLVFDLM-KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 157 (277)
T ss_dssp EECSSEEEEEEECC-TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cccCcceEEEEEcC-CCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchhe
Confidence 78888999999999 9999998883 7999999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC------------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhc
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDV 350 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 350 (408)
+...... ..+...||..| .++||||+||+++||+||+.||...... .....+
T Consensus 158 ~~~~~~~-~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~---------~~~~~i 227 (277)
T d1phka_ 158 CQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---------LMLRMI 227 (277)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHH
T ss_pred eEccCCC-ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH---------HHHHHH
Confidence 9875433 23446788887 4799999999999999999999743211 111122
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 351 LDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 351 ~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.......+. .........+.+++..|++.||++|++
T Consensus 228 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~~p~~R~s 263 (277)
T d1phka_ 228 MSGNYQFGS-PEWDDYSDTVKDLVSRFLVVQPQKRYT 263 (277)
T ss_dssp HHTCCCCCT-TTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred HhCCCCCCC-cccccCCHHHHHHHHHHccCChhHCcC
Confidence 222111100 111122345668889999999999964
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=1.4e-32 Score=259.50 Aligned_cols=198 Identities=17% Similarity=0.211 Sum_probs=142.5
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHH---HHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNE---VDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E---~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|+.. +|+.||||++.............+.+| ++++. .|||++++.++ +...
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~----~~~~ 79 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA----FHTP 79 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE----EECS
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEE----EEEC
Confidence 57999999999999999999984 689999999864322111222334444 56664 57777777766 6777
Q ss_pred ccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccC
Q 037624 246 ACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
+..++|+||+ ++|+|..++. +||.|++++.++.+||+|||+|+...
T Consensus 80 ~~~~ivmE~~-~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 80 DKLSFILDLM-NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 158 (364)
T ss_dssp SEEEEEECCC-CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred CEEEEEEEec-CCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence 8889999999 9999998873 89999999999999999999999765
Q ss_pred CCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCcc
Q 037624 293 CDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPV 359 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 359 (408)
... .....||+.| .++|||||||++|||+||+.||....... ...............+
T Consensus 159 ~~~--~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~~~~~~~~~~~~~~~~- 229 (364)
T d1omwa3 159 KKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------KHEIDRMTLTMAVELP- 229 (364)
T ss_dssp SSC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC------HHHHHHHSSSCCCCCC-
T ss_pred CCc--ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCCCCCC-
Confidence 432 3345788877 68999999999999999999996432110 0001111222221111
Q ss_pred chhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 360 DRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 360 ~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. .....+.+++..||+.||++|++
T Consensus 230 -~---~~s~~~~~li~~~L~~dP~~R~t 253 (364)
T d1omwa3 230 -D---SFSPELRSLLEGLLQRDVNRRLG 253 (364)
T ss_dssp -S---SSCHHHHHHHHHHTCSSTTTSTT
T ss_pred -C---CCCHHHHHHHHHHcccCHHHhCC
Confidence 1 11234567888999999999955
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.97 E-value=9.1e-32 Score=252.39 Aligned_cols=197 Identities=19% Similarity=0.213 Sum_probs=149.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++. +|+|+++++++ +.+++..
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~----~~~~~~~ 98 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDA----FEDDNEM 98 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEE----EEETTEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCCCCCCCcEEEE----EEECCEE
Confidence 5799999999999999999997 568999999996532 234577899999997 88888888887 7778889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccc--cCCceEEeecccccccC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL--RELEAFVADFGMTMHLY 292 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~--~~~~~ki~DfGla~~~~ 292 (408)
++||||+ ++|+|.+++. +||.|+++. .++.+||+|||+|+.+.
T Consensus 99 ~ivmE~~-~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 99 VMIYEFM-SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp EEEECCC-CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred EEEEEcC-CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 9999999 9999988772 799999986 46899999999999875
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... ......||+.| .++||||+||++|||+||+.||..... ...+..+.......+.
T Consensus 178 ~~~-~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---------~~~~~~i~~~~~~~~~- 246 (350)
T d1koaa2 178 PKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---------DETLRNVKSCDWNMDD- 246 (350)
T ss_dssp TTS-CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHTCCCSCC-
T ss_pred ccc-ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCCc-
Confidence 443 34567899998 689999999999999999999863211 1112222222211110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 247 ~~~~~~s~~~~~li~~~L~~dP~~R~t 273 (350)
T d1koaa2 247 SAFSGISEDGKDFIRKLLLADPNTRMT 273 (350)
T ss_dssp GGGGGCCHHHHHHHHHHCCSSGGGSCC
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcC
Confidence 111122234667888999999999954
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.5e-32 Score=252.48 Aligned_cols=196 Identities=18% Similarity=0.261 Sum_probs=140.3
Q ss_pred ceeecccceeEEEEEEeCCC----cEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC-Cccch
Q 037624 177 KYCFGTGGYGSVYIAQLTSS----KVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK-DACFW 249 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~~~g----~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~-~~~~~ 249 (408)
.++||+|+||+||+|++.++ ..||||+++.. .+....++|.+|+++|. +|+|+++++++ |.. +...+
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~----~~~~~~~~~ 105 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGI----CLRSEGSPL 105 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCCCTTBCCCCEE----EEETTTEEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCCCCCEeEEeEE----EEecCCceE
Confidence 46899999999999998442 26899999642 34455678999999997 88888888877 554 55788
Q ss_pred hhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 250 FMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+|+||+ ++|++.+++. +||.|+++++++.+||+|||+++......
T Consensus 106 lv~E~~-~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 106 VVLPYM-KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp EEEECC-TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred EEEEEe-ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence 999999 8999887662 79999999999999999999999765432
Q ss_pred Ce----eeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCC-CCCCc
Q 037624 296 SN----LTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDP-RLSPP 358 (408)
Q Consensus 296 ~~----~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~ 358 (408)
.. .....||..| .|+|||||||++|||+||+.|+........ ....+... +...+
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~--------~~~~i~~g~~~~~p 256 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQGRRLLQP 256 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------------CHHHHHTTCCCCCC
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCCCCCc
Confidence 22 1335678777 789999999999999998888653211111 01111111 11111
Q ss_pred cchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 359 VDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
..+...+.+++..||+.||++| |.+++..
T Consensus 257 -----~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 257 -----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp -----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -----ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1223456788899999999999 4444443
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.7e-32 Score=248.09 Aligned_cols=195 Identities=16% Similarity=0.220 Sum_probs=132.3
Q ss_pred hhcccceeecccceeEEEEEEeCC----CcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS----SKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||.||+|++.. +..||||+++.. ......+.|.+|++++. +|||+++++++ +. +
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~----~~-~ 79 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGV----IT-E 79 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEE----EC-S
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----Ee-c
Confidence 578889999999999999998743 346899998643 23345678999999997 78888888776 54 4
Q ss_pred ccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeeccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
+..++|+||+ ++|++..++. +||.|+++++++.+||+|||+|+..
T Consensus 80 ~~~~iv~E~~-~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 80 NPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158 (273)
T ss_dssp SSCEEEEECC-TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred CeEEEEEEec-cCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheec
Confidence 5678999999 8888877652 7899999999999999999999976
Q ss_pred CCCCCe-eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCCCC
Q 037624 292 YCDSSN-LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSP 357 (408)
Q Consensus 292 ~~~~~~-~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 357 (408)
...... .+...||+.| .++|||||||++|||+| |+.|+....... ....+.+....+
T Consensus 159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---------~~~~i~~~~~~~ 229 (273)
T d1mp8a_ 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---------VIGRIENGERLP 229 (273)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------HHHHHHTTCCCC
T ss_pred cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---------HHHHHHcCCCCC
Confidence 543322 3445678777 68999999999999998 899986432211 111122211110
Q ss_pred ccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 358 PVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
. +......+.+++..||+.||++|++
T Consensus 230 -~---~~~~~~~~~~li~~cl~~dp~~Rps 255 (273)
T d1mp8a_ 230 -M---PPNCPPTLYSLMTKCWAYDPSRRPR 255 (273)
T ss_dssp -C---CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred -C---CCCCCHHHHHHHHHHcCCCHhHCcC
Confidence 0 1122345678889999999999954
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=3.7e-32 Score=255.20 Aligned_cols=193 Identities=18% Similarity=0.185 Sum_probs=147.9
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||.||+|+. .+|+.||||++......+....+.+.+|+++|. +|+|+++++++ +......
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~----~~~~~~~ 116 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS----FKDNSNL 116 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccc----ccccccc
Confidence 5799999999999999999998 469999999986533222334577999999997 78888887777 6777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++++||+ .+|++..++. +||.|++++.++++||+|||+|+.....
T Consensus 117 ~~v~e~~-~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~- 194 (350)
T d1rdqe_ 117 YMVMEYV-AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EEEEECC-TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred ccccccc-cccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-
Confidence 8999999 8888887762 8999999999999999999999987532
Q ss_pred CeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccchhH
Q 037624 296 SNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVDRMV 363 (408)
Q Consensus 296 ~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 363 (408)
.....||+.| .++|||||||++|||+||+.||..... ......+.......+ .
T Consensus 195 --~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---------~~~~~~i~~~~~~~p--~-- 259 (350)
T d1rdqe_ 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---------IQIYEKIVSGKVRFP--S-- 259 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCC--T--
T ss_pred --cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH---------HHHHHHHhcCCCCCC--c--
Confidence 2346788888 789999999999999999999964321 111222222222211 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcC
Q 037624 364 VRDIVLVSTILFACLRSNPKTPM 386 (408)
Q Consensus 364 ~~~~~~~~~l~~~C~~~~P~~Rm 386 (408)
.....+.+++..|++.||++|+
T Consensus 260 -~~s~~~~~li~~~L~~dP~kR~ 281 (350)
T d1rdqe_ 260 -HFSSDLKDLLRNLLQVDLTKRF 281 (350)
T ss_dssp -TCCHHHHHHHHHHSCSCTTTCT
T ss_pred -cCCHHHHHHHHHHhhhCHHhcc
Confidence 1123456788899999999994
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.97 E-value=6.7e-32 Score=246.02 Aligned_cols=205 Identities=19% Similarity=0.230 Sum_probs=142.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|+. .+|+.||||+++.....+....+.|.+|++++. +|+|++++++++..........
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 5688999999999999999997 569999999998655455556678999999996 7777777777643322233457
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
++||||+ ++++|..++. +||.|++++.++..+++|||.++......
T Consensus 87 ~lvmE~~-~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~ 165 (277)
T d1o6ya_ 87 YIVMEYV-DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 165 (277)
T ss_dssp EEEEECC-CEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred EEEEECC-CCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccc
Confidence 8999999 8999887762 89999999999999999999998764332
Q ss_pred C---eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 296 S---NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 296 ~---~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
. .....+||+.| .++|||||||++|||+||+.||....... ....++......+.
T Consensus 166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---------~~~~~~~~~~~~~~- 235 (277)
T d1o6ya_ 166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS---------VAYQHVREDPIPPS- 235 (277)
T ss_dssp -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---------HHHHHHHCCCCCGG-
T ss_pred ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH---------HHHHHHhcCCCCCc-
Confidence 2 23456899998 68999999999999999999996432111 11111111111100
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 236 ~~~~~~s~~l~~li~~~L~~dp~~R~~ 262 (277)
T d1o6ya_ 236 ARHEGLSADLDAVVLKALAKNPENRYQ 262 (277)
T ss_dssp GTSSSCCHHHHHHHHHHTCSSGGGSCS
T ss_pred hhccCCCHHHHHHHHHHccCCHhHCHh
Confidence 001112234667888999999999964
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.2e-32 Score=250.50 Aligned_cols=200 Identities=17% Similarity=0.239 Sum_probs=140.9
Q ss_pred hhcccceeecccceeEEEEEEeCC-Cc--EEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTS-SK--VIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKD 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~-g~--~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~ 245 (408)
++|+..+.||+|+||+||+|++.+ |. .||||+++... .....++|.+|+++|. +|+|+++++++ +..+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~----~~~~ 83 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGA----CEHR 83 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEE----EEET
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEE----EecC
Confidence 578888999999999999999844 44 57888886432 2234678999999997 58888888888 8888
Q ss_pred ccchhhhhhcccchhhhhhhc-------------------------------------------------cCcccccccc
Q 037624 246 ACFWFMNTWRGEACSVFCTMI-------------------------------------------------MKPLSWIGLR 276 (408)
Q Consensus 246 ~~~~lv~e~~~~~g~l~~~l~-------------------------------------------------~k~~~~~l~~ 276 (408)
+..++|+||+ ++|+|.+++. +||.|++++.
T Consensus 84 ~~~~iV~ey~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~ 162 (309)
T d1fvra_ 84 GYLYLAIEYA-PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 162 (309)
T ss_dssp TEEEEEECCC-TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred CeeEEEEEec-CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcC
Confidence 8899999999 9999988651 7899999999
Q ss_pred CCceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCC-CCcccccccCCccccc
Q 037624 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQ-PGELLSSLSSSSSSDQ 343 (408)
Q Consensus 277 ~~~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~-p~~~~~~~~~~~~~~~ 343 (408)
++.+||+|||+|+....... .....||..| .++|||||||++|||+||.. |+.... .
T Consensus 163 ~~~~kl~DfG~a~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~---------~ 232 (309)
T d1fvra_ 163 NYVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---------C 232 (309)
T ss_dssp GGCEEECCTTCEESSCEECC-C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC---------H
T ss_pred CCceEEcccccccccccccc-ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC---------H
Confidence 99999999999986543221 2345688888 78999999999999999765 554321 1
Q ss_pred cchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCcccc
Q 037624 344 NIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHE 392 (408)
Q Consensus 344 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~ 392 (408)
......+.+ ..+.+. +......+.+++..||+.||++| |.+++..
T Consensus 233 ~~~~~~i~~-~~~~~~---~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 233 AELYEKLPQ-GYRLEK---PLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp HHHHHHGGG-TCCCCC---CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHh-cCCCCC---CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 111111211 111111 11223456788899999999999 4444443
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.6e-32 Score=251.75 Aligned_cols=195 Identities=16% Similarity=0.277 Sum_probs=137.3
Q ss_pred hhcccceeecccceeEEEEEEeC-CCc----EEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSK----VIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~ 244 (408)
++|+..+.||+|+||+||+|++. +|+ .||||+++.. .+....++|.+|++++. +|+|+++++++ |.+
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~----~~~ 82 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGI----CLT 82 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEE----EES
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEE----Eec
Confidence 36999999999999999999874 444 5899998653 23345678999999998 89999988888 766
Q ss_pred Cccchhhhhhcccchhhhhhhc----------------------------------cCccccccccCCceEEeecccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
+.. +++++|+ .+|++.+++. +||.|++++.++++||+|||+|+.
T Consensus 83 ~~~-~~v~e~~-~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~ 160 (317)
T d1xkka_ 83 STV-QLITQLM-PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160 (317)
T ss_dssp SSE-EEEEECC-TTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred CCe-eEEEEec-cCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeecccccee
Confidence 554 4556777 6777766552 799999999999999999999998
Q ss_pred cCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
....... .....||..| .++|||||||++|||+| |+.||+..... .+...+....
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~----------~~~~~i~~~~ 230 (317)
T d1xkka_ 161 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----------EISSILEKGE 230 (317)
T ss_dssp TTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG----------GHHHHHHHTC
T ss_pred cccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH----------HHHHHHHcCC
Confidence 7554333 2345688888 78999999999999999 78888643211 1122221111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
+.+. +..+...+.+++..||+.||++|++
T Consensus 231 ~~~~---p~~~~~~~~~li~~cl~~dP~~RPs 259 (317)
T d1xkka_ 231 RLPQ---PPICTIDVYMIMVKCWMIDADSRPK 259 (317)
T ss_dssp CCCC---CTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCC---CcccCHHHHHHHHHhCCCChhhCcC
Confidence 1111 1123345678889999999999944
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.97 E-value=2.1e-31 Score=250.15 Aligned_cols=197 Identities=17% Similarity=0.204 Sum_probs=147.1
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++. +|+|+++++++ +.++...
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~----~~~~~~~ 101 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDA----FEDKYEM 101 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEE----EECSSEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhCCCCCCCcEEEE----EEECCEE
Confidence 4699999999999999999997 569999999987532 233567889999997 78888887777 6778888
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccc--cCCceEEeecccccccC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL--RELEAFVADFGMTMHLY 292 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~--~~~~~ki~DfGla~~~~ 292 (408)
++||||+ ++|+|.+++. +||.|++++ .++++||+|||+|+...
T Consensus 102 ~ivmE~~-~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 102 VLILEFL-SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180 (352)
T ss_dssp EEEEECC-CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEEEcC-CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecC
Confidence 9999999 9999987652 799999997 67899999999999876
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... ......||+.| .++||||+||++|||+||+.||...... ..+..+.......+.
T Consensus 181 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---------~~~~~i~~~~~~~~~- 249 (352)
T d1koba_ 181 PDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---------ETLQNVKRCDWEFDE- 249 (352)
T ss_dssp TTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---------HHHHHHHHCCCCCCS-
T ss_pred CCC-ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhCCCCCCc-
Confidence 443 34556788877 7899999999999999999999643211 111122111111100
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 250 ~~~~~~s~~~~~li~~~L~~dp~~R~s 276 (352)
T d1koba_ 250 DAFSSVSPEAKDFIKNLLQKEPRKRLT 276 (352)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcC
Confidence 001112234568889999999999944
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.6e-32 Score=248.46 Aligned_cols=198 Identities=16% Similarity=0.194 Sum_probs=133.0
Q ss_pred hhcccceeecccceeEEEEEEeC------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC 242 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~ 242 (408)
++|+..+.||+|+||.||+|+.. +++.||||+++.. ......+.|.+|...+. +|+|++.+.++ ..
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~---~~ 87 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGA---CT 87 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE---EC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc--cCcHHHHHHHHHHHHHHhhcCCCeEEEeeee---ec
Confidence 57889999999999999999863 3568999999743 22334567888888776 56666666555 33
Q ss_pred cCCccchhhhhhcccchhhhhhhc-------------------------------------------------cCccccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTMI-------------------------------------------------MKPLSWI 273 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------------~k~~~~~ 273 (408)
..+...++++||+ ++|+|.+++. +||.|++
T Consensus 88 ~~~~~~~iv~E~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NIL 166 (299)
T d1ywna1 88 KPGGPLMVIVEFC-KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 166 (299)
T ss_dssp STTSCCEEEEECC-TTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred cCCCeEEEEEEec-CCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcccee
Confidence 4455688999999 9999877641 7999999
Q ss_pred cccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHhCC-CCCcccccccCC
Q 037624 274 GLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILMGR-QPGELLSSLSSS 338 (408)
Q Consensus 274 l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Elltg~-~p~~~~~~~~~~ 338 (408)
+++++++||+|||+|+........ .+...||+.| .++|||||||++|||+||. .||........
T Consensus 167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~- 245 (299)
T d1ywna1 167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 245 (299)
T ss_dssp ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-
T ss_pred ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 999999999999999876543322 2456788888 7899999999999999975 56653221100
Q ss_pred ccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 339 SSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 339 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
....+.+-..+.... .....+.+++..||+.||++|++
T Consensus 246 ----~~~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~Rpt 283 (299)
T d1ywna1 246 ----FCRRLKEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPT 283 (299)
T ss_dssp ----HHHHHHHTCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ----HHHHHhcCCCCCCCc-------cCCHHHHHHHHHHcCCChhHCcC
Confidence 000111111222211 12335678889999999999944
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.97 E-value=5.4e-31 Score=241.17 Aligned_cols=154 Identities=23% Similarity=0.214 Sum_probs=121.8
Q ss_pred hhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccch
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFW 249 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~ 249 (408)
++|+..+.||+|+||+||+|+.++|+.||||+++.... +....+.|.+|+.+|. +|+|+++++.. +..+...+
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~----~~~~~~~~ 76 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDV----IHTKKRLV 76 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEE----EECSSCEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEeeeee----cccCCcee
Confidence 57888999999999999999999999999999976432 2334678999999997 88888888777 77778888
Q ss_pred hhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 250 FMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 250 lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
++++|+ .++.+..... +||.|++++.++.+|++|||+|........
T Consensus 77 i~~e~~-~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 77 LVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp EEEECC-SEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred EEEEee-hhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCcc
Confidence 899988 6655544431 899999999999999999999988754443
Q ss_pred eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......||+.| .++||||+||+++||+||+.||..
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~ 203 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCC
Confidence 33444566666 789999999999999999999964
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.1e-31 Score=248.42 Aligned_cols=204 Identities=14% Similarity=0.196 Sum_probs=149.9
Q ss_pred HhhcccceeecccceeEEEEEEe------CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEee
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL------TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFV 241 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~ 241 (408)
.++|+..+.||+|+||.||+|++ .+++.||||+++... .......|.+|+.++. +|+|+++++++
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~---- 95 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGA---- 95 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE----
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEE----
Confidence 36788889999999999999986 346789999997532 3345567999999887 68888888888
Q ss_pred ecCCccchhhhhhcccchhhhhhhc---------------------------------------------------cCcc
Q 037624 242 CIKDACFWFMNTWRGEACSVFCTMI---------------------------------------------------MKPL 270 (408)
Q Consensus 242 ~~~~~~~~lv~e~~~~~g~l~~~l~---------------------------------------------------~k~~ 270 (408)
|......++++||+ ++|++..++. +||.
T Consensus 96 ~~~~~~~~lvmE~~-~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~ 174 (311)
T d1t46a_ 96 CTIGGPTLVITEYC-CYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174 (311)
T ss_dssp ECSSSSCEEEEECC-TTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EeeCCEEEEEEEcC-CCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccc
Confidence 88888899999999 9998877641 7899
Q ss_pred ccccccCCceEEeecccccccCCCCCee--eecccCCCC------------cccchhhhhHHHHHHHhCCCC-Ccccccc
Q 037624 271 SWIGLRELEAFVADFGMTMHLYCDSSNL--TLLAGTYGY------------EKCDVYSFGVVALEILMGRQP-GELLSSL 335 (408)
Q Consensus 271 ~~~l~~~~~~ki~DfGla~~~~~~~~~~--~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p-~~~~~~~ 335 (408)
|++++.++.+|++|||+++......... +...||+.| .++|||||||++|||+|+..| +....
T Consensus 175 NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~-- 252 (311)
T d1t46a_ 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-- 252 (311)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--
T ss_pred cccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC--
Confidence 9999999999999999999875443322 346788887 789999999999999995554 43221
Q ss_pred cCCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCc--CCCccccc
Q 037624 336 SSSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTP--MQKPFHEI 393 (408)
Q Consensus 336 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R--m~~~~~~~ 393 (408)
....+.++++...+..... .....+.+++..||+.||++| |++++..+
T Consensus 253 -------~~~~~~~~i~~~~~~~~~~---~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L 302 (311)
T d1t46a_ 253 -------VDSKFYKMIKEGFRMLSPE---HAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (311)
T ss_dssp -------SSHHHHHHHHHTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -------HHHHHHHHHhcCCCCCCcc---cccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 1111223333222221111 223457788899999999999 44444433
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.6e-31 Score=242.62 Aligned_cols=150 Identities=19% Similarity=0.190 Sum_probs=119.3
Q ss_pred ceeecccceeEEEEEEe-CCCcEEEEEecccccCCC--cchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccchhh
Q 037624 177 KYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEE--PASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACFWFM 251 (408)
Q Consensus 177 ~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~~lv 251 (408)
.++||+|+||+||+|+. .+|+.||||+++...... ....+.+.+|++++. +|+|+++++++ +..++..++|
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~----~~~~~~~~iv 78 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA----FGHKSNISLV 78 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEE----ECCTTCCEEE
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEee----eccCCceeeh
Confidence 57899999999999998 458999999997543221 223467899999997 88888888887 7778889999
Q ss_pred hhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCCCee
Q 037624 252 NTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSSNL 298 (408)
Q Consensus 252 ~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~~~ 298 (408)
+||+ +++.+..... +||.|++++.++.+||+|||+|+.........
T Consensus 79 mE~~-~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~ 157 (299)
T d1ua2a_ 79 FDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY 157 (299)
T ss_dssp EECC-SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC
T ss_pred hhhh-cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccc
Confidence 9999 7766654441 89999999999999999999998876555444
Q ss_pred eecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 299 TLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 299 ~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...+||+.| .++|||||||+++||+||+.||..
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 203 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG 203 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCC
Confidence 556788888 689999999999999999999864
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-30 Score=240.15 Aligned_cols=154 Identities=23% Similarity=0.238 Sum_probs=123.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ......+++.+|++++. +|+|+++++++ +..+...
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~----~~~~~~~ 76 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDV----IHTENKL 76 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEE----EEETTEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cChHHHHHHHHHHHHHHhCCCCcEEEeccc----cccccce
Confidence 5899999999999999999997 569999999996532 22334678999999997 78888888777 6778888
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccccccCCC
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
++++||+ .++.+.... ++||.|++++.++++||+|||+|+.....
T Consensus 77 ~iv~e~~-~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 77 YLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp EEEEECC-SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred eEEEeec-CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCC
Confidence 9999998 544332221 17999999999999999999999987655
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
........||+.| .++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~ 205 (298)
T d1gz8a_ 156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205 (298)
T ss_dssp SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCC
Confidence 5445556788887 689999999999999999999864
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.9e-30 Score=240.87 Aligned_cols=200 Identities=20% Similarity=0.247 Sum_probs=144.6
Q ss_pred hhcccce-eecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCc
Q 037624 172 EDFDIKY-CFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDA 246 (408)
Q Consensus 172 ~~f~~~~-~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~ 246 (408)
++|.... .||+|+||+||+|+. .+|+.||||+++. ...+.+|++++. +|+|+++++++++.....+.
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~--------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~ 82 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 82 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC--------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence 5787764 699999999999997 5689999999864 245778887754 78999988888654445567
Q ss_pred cchhhhhhcccchhhhhhhc-----------------------------------cCcccccccc---CCceEEeecccc
Q 037624 247 CFWFMNTWRGEACSVFCTMI-----------------------------------MKPLSWIGLR---ELEAFVADFGMT 288 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~-----------------------------------~k~~~~~l~~---~~~~ki~DfGla 288 (408)
..++++||+ ++|+|.+++. +||.|+++++ ++.+||+|||+|
T Consensus 83 ~~~ivmEy~-~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 83 CLLIVMECL-DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEEEECC-CSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEEEECC-CCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccccccee
Confidence 789999999 9999998872 7899998874 567999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
+...... ......||+.| .++|||||||++|||+||+.||......... ......+......
T Consensus 162 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~-----~~~~~~i~~~~~~ 235 (335)
T d2ozaa1 162 KETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----PGMKTRIRMGQYE 235 (335)
T ss_dssp EECCCCC-CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------------CCCSCSSS
T ss_pred eeccCCC-ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH-----HHHHHHHhcCCCC
Confidence 9875433 33456799988 7899999999999999999999643221110 0001111111111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.+. .........+.+++..|++.||++|++
T Consensus 236 ~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s 265 (335)
T d2ozaa1 236 FPN-PEWSEVSEEVKMLIRNLLKTEPTQRMT 265 (335)
T ss_dssp CCT-THHHHSCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCC-cccccCCHHHHHHHHHHccCChhHCcC
Confidence 111 122233455778889999999999954
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.6e-30 Score=241.29 Aligned_cols=196 Identities=18% Similarity=0.186 Sum_probs=147.6
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
++|...+.||+|+||+||+|... +|+.||||.++... .....+.+|+++|. +|+|+++++++ +.++...
T Consensus 5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~HpnIv~~~~~----~~~~~~~ 76 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHES----FESMEEL 76 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEE----EEETTEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhCCCCCCCeEEEE----EEECCEE
Confidence 57888999999999999999984 68899999997532 23456889999987 88888888887 6677889
Q ss_pred hhhhhhcccchhhhhhhc----------------------------------cCccccccc--cCCceEEeecccccccC
Q 037624 249 WFMNTWRGEACSVFCTMI----------------------------------MKPLSWIGL--RELEAFVADFGMTMHLY 292 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~--~~~~~ki~DfGla~~~~ 292 (408)
++|+||+ ++|+|.+++. +||.|++++ ...++||+|||+++...
T Consensus 77 ~lvmE~~-~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 77 VMIFEFI-SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCC-CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEEecC-CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccc
Confidence 9999999 8999988773 789999987 44589999999998875
Q ss_pred CCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCCCccc
Q 037624 293 CDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLSPPVD 360 (408)
Q Consensus 293 ~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 360 (408)
... ......||+.| .++||||+||++|||+||+.||.... .......+.......+.
T Consensus 156 ~~~-~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~---------~~~~~~~i~~~~~~~~~- 224 (321)
T d1tkia_ 156 PGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET---------NQQIIENIMNAEYTFDE- 224 (321)
T ss_dssp TTC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS---------HHHHHHHHHHTCCCCCH-
T ss_pred cCC-cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC---------HHHHHHHHHhCCCCCCh-
Confidence 433 34456788877 78999999999999999999986422 11122333333332211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 361 RMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 361 ~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.........+.+++..|++.||++|++
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~R~s 251 (321)
T d1tkia_ 225 EAFKEISIEAMDFVDRLLVKERKSRMT 251 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred hhccCCCHHHHHHHHHHccCChhHCcC
Confidence 111122344668889999999999954
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-30 Score=240.21 Aligned_cols=200 Identities=17% Similarity=0.223 Sum_probs=141.6
Q ss_pred hhcccceeecccceeEEEEEEeC--------CCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEe
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT--------SSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDF 240 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~ 240 (408)
++|...+.||+|+||.||+|+.. ++..||||+++... ......+|.+|...+. +|+|++++.++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~--- 87 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA--- 87 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE---
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEecccc---
Confidence 57888899999999999999862 23479999997532 2334577888888776 79999998888
Q ss_pred eecCCccchhhhhhcccchhhhhhhc-------------------------------------------------cCccc
Q 037624 241 VCIKDACFWFMNTWRGEACSVFCTMI-------------------------------------------------MKPLS 271 (408)
Q Consensus 241 ~~~~~~~~~lv~e~~~~~g~l~~~l~-------------------------------------------------~k~~~ 271 (408)
|.++...++++||+ ++|++.+++. +||.|
T Consensus 88 -~~~~~~~~~v~e~~-~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N 165 (299)
T d1fgka_ 88 -CTQDGPLYVIVEYA-SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 165 (299)
T ss_dssp -ECSSSSCEEEECCC-TTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred -cccCCeEEEEEEcc-CCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc
Confidence 88888999999999 9999987661 78999
Q ss_pred cccccCCceEEeecccccccCCCCCe--eeecccCCCC------------cccchhhhhHHHHHHHh-CCCCCccccccc
Q 037624 272 WIGLRELEAFVADFGMTMHLYCDSSN--LTLLAGTYGY------------EKCDVYSFGVVALEILM-GRQPGELLSSLS 336 (408)
Q Consensus 272 ~~l~~~~~~ki~DfGla~~~~~~~~~--~~~~~gt~~y------------~k~DVySfGvvl~Ellt-g~~p~~~~~~~~ 336 (408)
++++.++.+||+|||+++........ .....||+.| .|+||||||||+|||+| |+.||.....
T Consensus 166 iLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-- 243 (299)
T d1fgka_ 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 243 (299)
T ss_dssp EEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred eeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH--
Confidence 99999999999999999977543322 2335677777 79999999999999998 6888753211
Q ss_pred CCccccccchhhhccCCCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC--Cccc
Q 037624 337 SSSSSDQNIMLLDVLDPRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ--KPFH 391 (408)
Q Consensus 337 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~--~~~~ 391 (408)
. .+.+.+......+... .....+.+++..||+.||++|++ +++.
T Consensus 244 -------~-~~~~~i~~~~~~~~p~---~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 244 -------E-ELFKLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp -------H-HHHHHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------H-HHHHHHHcCCCCCCCc---cchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 1 1112222222111111 22345778999999999999944 4444
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.4e-30 Score=231.03 Aligned_cols=190 Identities=19% Similarity=0.222 Sum_probs=139.6
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCc---chhhHHHHHHHHhc----ccCCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEP---ASTRSFQNEVDILY----PKYDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~---~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~ 243 (408)
++|...+.||+|+||+||+|+. .+|+.||||++......+. .....+.+|+.++. .|+|+++++++ +.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~----~~ 79 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW----FE 79 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE----EE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEE----Ee
Confidence 4688899999999999999997 5689999999975432221 12345778998885 37888888887 77
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccc-cCCceEEeeccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGL-RELEAFVADFGMTM 289 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~-~~~~~ki~DfGla~ 289 (408)
.++..++++||+...+++..++. +||.|++++ +++.+||+|||+|+
T Consensus 80 ~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 80 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 159 (273)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccce
Confidence 77888899998834456665542 899999998 45799999999998
Q ss_pred ccCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCCC
Q 037624 290 HLYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRLS 356 (408)
Q Consensus 290 ~~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 356 (408)
..... ..+...||+.| .++||||+||++|||+||+.||........ ..-...+.+
T Consensus 160 ~~~~~--~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~---------~~~~~~~~~- 227 (273)
T d1xwsa_ 160 LLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRV- 227 (273)
T ss_dssp ECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH---------CCCCCSSCC-
T ss_pred ecccc--cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhh---------cccCCCCCC-
Confidence 75432 33456789888 568999999999999999999864321100 000011111
Q ss_pred CccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 357 PPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
...+.+++..|++.||++|++
T Consensus 228 ----------s~~~~~li~~~L~~dp~~R~s 248 (273)
T d1xwsa_ 228 ----------SSECQHLIRWCLALRPSDRPT 248 (273)
T ss_dssp ----------CHHHHHHHHHHTCSSGGGSCC
T ss_pred ----------CHHHHHHHHHHccCCHhHCcC
Confidence 123567888999999999954
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.1e-30 Score=239.48 Aligned_cols=201 Identities=20% Similarity=0.311 Sum_probs=145.6
Q ss_pred hhcccceeecccceeEEEEEEe----CCCcEEEEEecccccC-CCcchhhHHHHHHHHhc--cc-CCcceeeeEeEeeec
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL----TSSKVIALKKLHHWEN-EEPASTRSFQNEVDILY--PK-YDIETLLSFMDFVCI 243 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~l~--~~-~n~~~l~~~~~~~~~ 243 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... .+....+.+.+|++++. +| +|++++..+ +.
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~----~~ 99 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA----FQ 99 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEE----EE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeee----ec
Confidence 5799999999999999999986 2478999999875332 12233567889999987 45 688887777 67
Q ss_pred CCccchhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccc
Q 037624 244 KDACFWFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 244 ~~~~~~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
.....++++||+ .+|+|..++. +||.|++++.++.+||+|||+|+.
T Consensus 100 ~~~~~~~v~e~~-~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 100 TETKLHLILDYI-NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp ETTEEEEEECCC-CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred cCCceeeeeecc-cccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhh
Confidence 777888999999 9999988873 799999999999999999999987
Q ss_pred cCCCCC-eeeecccCCCC--------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccCCCC
Q 037624 291 LYCDSS-NLTLLAGTYGY--------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLDPRL 355 (408)
Q Consensus 291 ~~~~~~-~~~~~~gt~~y--------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d~~l 355 (408)
...... ......||+.| .++|||||||+|+||+||+.||......... .........+..
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~-----~~i~~~~~~~~~ 253 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-----AEISRRILKSEP 253 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH-----HHHHHHHHHCCC
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHHhcccCCC
Confidence 643322 23345677665 5899999999999999999999643221110 000111111111
Q ss_pred CCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 356 SPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+ . .....+.+++..|++.||++|++
T Consensus 254 ~~~--~---~~s~~~~~li~~~l~~dP~~R~s 280 (322)
T d1vzoa_ 254 PYP--Q---EMSALAKDLIQRLLMKDPKKRLG 280 (322)
T ss_dssp CCC--T---TSCHHHHHHHHHHTCSSGGGSTT
T ss_pred CCc--c---cCCHHHHHHHHHHcccCHHHcCC
Confidence 111 1 22345667788999999999965
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.7e-28 Score=223.74 Aligned_cols=153 Identities=19% Similarity=0.209 Sum_probs=122.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||+++... ......+++.+|+.++. +|+|++++.++ +......
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~----~~~~~~~ 76 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDV----LHSDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEE----EECSSEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-CChHHHHHHHHHHHHHHhcCcCCEEeeccc----cccccce
Confidence 4688899999999999999997 568899999997543 33345678999999997 78887777777 7777888
Q ss_pred hhhhhhcccchhhhhhhc---------------------------------cCccccccccCCceEEeecccccccCCCC
Q 037624 249 WFMNTWRGEACSVFCTMI---------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDS 295 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l~---------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~ 295 (408)
+++++++ .++++...+. +||.|++++.++++||+|||.|+......
T Consensus 77 ~iv~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~ 155 (292)
T d1unla_ 77 TLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EEEEECC-SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred eEEeeec-cccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC
Confidence 8889888 7777665542 89999999999999999999999875443
Q ss_pred CeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 296 SNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 296 ~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
.......++..| .++|||||||+++||+||+.|+.
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 203 (292)
T d1unla_ 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCC
Confidence 332222333333 68999999999999999999963
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.6e-29 Score=228.21 Aligned_cols=158 Identities=18% Similarity=0.204 Sum_probs=119.6
Q ss_pred HhhcccceeecccceeEEEEEEe-CC-CcEEEEEecccccCCCcchhhHHHHHHHHhc-----ccCCcceeeeEeEeee-
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TS-SKVIALKKLHHWENEEPASTRSFQNEVDILY-----PKYDIETLLSFMDFVC- 242 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~-----~~~n~~~l~~~~~~~~- 242 (408)
.++|+..+.||+|+||+||+|+. .+ ++.||||+++..... ......+.+|+.++. +|+|++++++++....
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 46899999999999999999997 34 678999999754322 223445677877764 5888888877733211
Q ss_pred cCCccchhhhhhcccchhhhhhh----------------------------------ccCccccccccCCceEEeecccc
Q 037624 243 IKDACFWFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGLRELEAFVADFGMT 288 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~~~~~~ki~DfGla 288 (408)
......++++||+ +++.+.... ++||.|+++++++.+||+|||++
T Consensus 85 ~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~ 163 (305)
T d1blxa_ 85 DRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 163 (305)
T ss_dssp SSEEEEEEEEECC-SCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred ccCceEEEEEEec-cCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence 2345677888888 665543222 18999999999999999999999
Q ss_pred cccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 289 MHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 289 ~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
+..... .......||+.| .++||||+||++|||+||+.||..
T Consensus 164 ~~~~~~-~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~ 217 (305)
T d1blxa_ 164 RIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 217 (305)
T ss_dssp CCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred hhhccc-ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCC
Confidence 875432 233557899988 799999999999999999999964
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.1e-28 Score=227.32 Aligned_cols=158 Identities=18% Similarity=0.166 Sum_probs=117.2
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee----ecC
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV----CIK 244 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~----~~~ 244 (408)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ......+++.+|+++|. +|+|++++.+.+... ...
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 6789999999999999999997 579999999987643 23345678899999997 888888887773221 112
Q ss_pred Cccchhhhhhcccchhhhhhh---------------------------------ccCccccccccCCceEEeeccccccc
Q 037624 245 DACFWFMNTWRGEACSVFCTM---------------------------------IMKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 245 ~~~~~lv~e~~~~~g~l~~~l---------------------------------~~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
....++++||+ +.+.+.... ++||.|++++.++.+||+|||+++..
T Consensus 89 ~~~~~iv~e~~-~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~ 167 (318)
T d3blha1 89 KGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 167 (318)
T ss_dssp --CEEEEEECC-CEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CceEEEEEecc-CCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeec
Confidence 34567888988 655554332 18999999999999999999999876
Q ss_pred CCCCCe----eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCDSSN----LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~~~~----~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...... ....+||+.| .|+||||+||+++||+||+.||..
T Consensus 168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~ 224 (318)
T d3blha1 168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 224 (318)
T ss_dssp CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCC
Confidence 532211 1234677777 789999999999999999999864
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.6e-27 Score=223.66 Aligned_cols=154 Identities=20% Similarity=0.227 Sum_probs=116.4
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCc-
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDA- 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~- 246 (408)
++.|...+.||+|+||+||+|+. .+|+.||||++.... .....+.+.+|+++|. +|+|++++.++ +....
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~----~~~~~~ 80 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDI----IRAPTI 80 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEE----ECCSST
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEE----Eeeccc
Confidence 34688899999999999999987 579999999997532 3344668899999997 88888888777 43322
Q ss_pred ---cchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeeccccccc
Q 037624 247 ---CFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHL 291 (408)
Q Consensus 247 ---~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~ 291 (408)
..+++++++ .+|+|.+++. +||.|+++++++.+||+|||+|+..
T Consensus 81 ~~~~~~~l~~~~-~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~ 159 (345)
T d1pmea_ 81 EQMKDVYLVTHL-MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 159 (345)
T ss_dssp TTCCCEEEEEEC-CCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred cccceEEEEEee-cCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeec
Confidence 233444556 6788887772 8999999999999999999999876
Q ss_pred CCCCCe---eeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 292 YCDSSN---LTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 292 ~~~~~~---~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
...... ....+||+.| .++||||+||+++||+||+.||..
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~ 215 (345)
T d1pmea_ 160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 215 (345)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCC
Confidence 433221 2345567666 689999999999999999999864
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.1e-27 Score=222.05 Aligned_cols=150 Identities=21% Similarity=0.242 Sum_probs=111.4
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee--cCCcc
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC--IKDAC 247 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~--~~~~~ 247 (408)
+|+..++||+|+||+||+|+. .+|+.||||++.... ..+.+|+++|. +|+|++++++++.... .....
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~ 93 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-------SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc-------hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence 577889999999999999998 468999999997532 12347888886 7888888777732211 12234
Q ss_pred chhhhhhcccchhhhhhh------------------------------------ccCccccccccC-CceEEeecccccc
Q 037624 248 FWFMNTWRGEACSVFCTM------------------------------------IMKPLSWIGLRE-LEAFVADFGMTMH 290 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l------------------------------------~~k~~~~~l~~~-~~~ki~DfGla~~ 290 (408)
.++++||+ +++...... ++||.|++++.+ ..+||+|||+++.
T Consensus 94 ~~lv~Ey~-~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~ 172 (350)
T d1q5ka_ 94 LNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172 (350)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred EEEEEecc-CCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhh
Confidence 67899998 655322211 189999999966 4899999999987
Q ss_pred cCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
..... ......||..| .++||||+||+++||+||+.||..
T Consensus 173 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~ 225 (350)
T d1q5ka_ 173 LVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225 (350)
T ss_dssp CCTTS-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccCCc-ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCC
Confidence 75433 22334566666 789999999999999999999864
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.94 E-value=1.8e-27 Score=218.88 Aligned_cols=200 Identities=15% Similarity=0.172 Sum_probs=132.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCCccc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKDACF 248 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~~~~ 248 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||.+.... ...++..|++++. +|++++..+.. +...+...
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~~~~E~~i~~~l~~~~~i~~~~~---~~~~~~~~ 78 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRW---CGAEGDYN 78 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-----TSCCHHHHHHHHHHSTTSTTCCCEEE---EEEETTEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-----cCHHHHHHHHHHHHccCCCcccEEEE---EEecCCEE
Confidence 4588899999999999999997 568999999986532 1345788999886 56655544433 14556677
Q ss_pred hhhhhhcccchhhhhhh----------------------------------ccCccccccc---cCCceEEeeccccccc
Q 037624 249 WFMNTWRGEACSVFCTM----------------------------------IMKPLSWIGL---RELEAFVADFGMTMHL 291 (408)
Q Consensus 249 ~lv~e~~~~~g~l~~~l----------------------------------~~k~~~~~l~---~~~~~ki~DfGla~~~ 291 (408)
++|+||+ .+ ++...+ ++||.|+++. .+..+||+|||+|+..
T Consensus 79 ~ivme~~-~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~ 156 (299)
T d1ckia_ 79 VMVMELL-GP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156 (299)
T ss_dssp EEEEECC-CC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred EEEEEEc-CC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence 8889988 33 333222 1899999754 5678999999999987
Q ss_pred CCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC
Q 037624 292 YCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 292 ~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
..... ......||+.| .++|||||||+++||+||+.||........... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~------~~~~~~ 230 (299)
T d1ckia_ 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK------YERISE 230 (299)
T ss_dssp BCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------------HHHHHH
T ss_pred cccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH------HHHhhc
Confidence 54322 12456799998 789999999999999999999864322211100 000000
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
..+..+...........+.+++..||+.+|++|++
T Consensus 231 ~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~ 265 (299)
T d1ckia_ 231 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD 265 (299)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCC
T ss_pred ccCCCChhHhccCCCHHHHHHHHHHccCChhHCcC
Confidence 00000000111122345678888999999999954
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.94 E-value=2.7e-27 Score=216.88 Aligned_cols=202 Identities=15% Similarity=0.143 Sum_probs=135.4
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhcccCCcceeeeEeEeeecCCccchh
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYDIETLLSFMDFVCIKDACFWF 250 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~~~~n~~~l~~~~~~~~~~~~~~~l 250 (408)
++|...+.||+|+||+||+|+. .+|+.||||.+..... . ...+...+++..+..|+|++++..+ ...+...++
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~-~~~~~e~~~~~~l~~~~~i~~~~~~----~~~~~~~~~ 78 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-A-PQLRDEYRTYKLLAGCTGIPNVYYF----GQEGLHNVL 78 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-S-CCHHHHHHHHHHTTTCTTCCCEEEE----EEETTEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-c-HHHHHHHHHHHHhcCCCCCCEEEEE----eecCCccEE
Confidence 5788999999999999999997 4688999998865321 1 1222233444445356888888877 667778889
Q ss_pred hhhhcccchhhhhhhc----------------------------------cCcccccccc-----CCceEEeeccccccc
Q 037624 251 MNTWRGEACSVFCTMI----------------------------------MKPLSWIGLR-----ELEAFVADFGMTMHL 291 (408)
Q Consensus 251 v~e~~~~~g~l~~~l~----------------------------------~k~~~~~l~~-----~~~~ki~DfGla~~~ 291 (408)
|+||+ +++|...+. +||.|+++.. ++.+||+|||+|+..
T Consensus 79 vme~~--~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 79 VIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp EEECC--CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEec--CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 99998 356655542 7999999863 578999999999976
Q ss_pred CCCCC-------eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcccccccCCccccccchhhhccC
Q 037624 292 YCDSS-------NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGELLSSLSSSSSSDQNIMLLDVLD 352 (408)
Q Consensus 292 ~~~~~-------~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~d 352 (408)
..... .....+||+.| .++|||||||+++||+||+.||........ ......+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~------~~~~~~i~~ 230 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN------KQKYERIGE 230 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH------HHHHHHHHH
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH------HHHHHHHHh
Confidence 53221 12356899999 689999999999999999999964321111 000111111
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhccCCCCCcCC
Q 037624 353 PRLSPPVDRMVVRDIVLVSTILFACLRSNPKTPMQ 387 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~l~~~C~~~~P~~Rm~ 387 (408)
.....+........+..+.+++..|++.+|++|+.
T Consensus 231 ~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~ 265 (293)
T d1csna_ 231 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPD 265 (293)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred ccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcC
Confidence 00000000111122345677888899999999954
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.7e-27 Score=219.54 Aligned_cols=150 Identities=21% Similarity=0.254 Sum_probs=111.8
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeeecCC---
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVCIKD--- 245 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~~~~--- 245 (408)
+.|+..+.||+|+||+||+|+. .+|+.||||+++... .+....+.+.+|+++|. +|+|++++.++ +...
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpniv~l~~~----~~~~~~~ 92 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDV----FTPDETL 92 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEE----ECSCSST
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcCCCCeeEEEEE----eccCccc
Confidence 4688889999999999999997 569999999997532 33345678899999997 78888877776 4333
Q ss_pred ---ccchhhhhhcccchhhhhhh--------------------------------ccCccccccccCCceEEeecccccc
Q 037624 246 ---ACFWFMNTWRGEACSVFCTM--------------------------------IMKPLSWIGLRELEAFVADFGMTMH 290 (408)
Q Consensus 246 ---~~~~lv~e~~~~~g~l~~~l--------------------------------~~k~~~~~l~~~~~~ki~DfGla~~ 290 (408)
...++++||++ .++.... ++||.|++++.++.+|++|||+|+.
T Consensus 93 ~~~~~~~lv~e~~~--~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~ 170 (346)
T d1cm8a_ 93 DDFTDFYLVMPFMG--TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 170 (346)
T ss_dssp TTCCCCEEEEECCS--EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred cccceEEEEEeccc--ccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceec
Confidence 24678899983 2333322 1899999999999999999999987
Q ss_pred cCCCCCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 291 LYCDSSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 291 ~~~~~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.... .+...||..| .++||||+||+++||++|+.||..
T Consensus 171 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~ 221 (346)
T d1cm8a_ 171 ADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 221 (346)
T ss_dssp CCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCc---cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCC
Confidence 6433 2345677666 689999999999999999999864
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.93 E-value=1.6e-26 Score=215.39 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=118.5
Q ss_pred hhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeeecCCcc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVCIKDAC 247 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~~~~~~ 247 (408)
++|+..+.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|. .|+|++++++++. ......
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~--~~~~~~ 106 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVK--DPVSRT 106 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEE--CTTTCS
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEE--ecCCCc
Confidence 5899999999999999999998 56899999998642 2467899999986 4788877776622 223456
Q ss_pred chhhhhhcccchhhhhhhc------------------------------cCcccccccc-CCceEEeecccccccCCCCC
Q 037624 248 FWFMNTWRGEACSVFCTMI------------------------------MKPLSWIGLR-ELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 248 ~~lv~e~~~~~g~l~~~l~------------------------------~k~~~~~l~~-~~~~ki~DfGla~~~~~~~~ 296 (408)
.++++||+ ++++|..... +||.|++++. +..+||+|||+|+......
T Consensus 107 ~~~v~e~~-~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~- 184 (328)
T d3bqca1 107 PALVFEHV-NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ- 184 (328)
T ss_dssp EEEEEECC-CSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC-
T ss_pred eeEEEeec-CCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCC-
Confidence 78899999 8888876552 8999999985 4569999999998765432
Q ss_pred eeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 297 NLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 297 ~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
......||..| .++||||+||+++||++|+.||..
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~ 232 (328)
T d3bqca1 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232 (328)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCC
Confidence 22344566665 678999999999999999999853
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.3e-26 Score=213.48 Aligned_cols=156 Identities=17% Similarity=0.159 Sum_probs=109.9
Q ss_pred hhcccceeecccceeEEEEEEeC-CCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEee--ecCCc
Q 037624 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFV--CIKDA 246 (408)
Q Consensus 172 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~--~~~~~ 246 (408)
+.|+..++||+|+||+||+|+.. +|+.||||++.... .+....+.+.+|+.++. +|+|++++.+++..- .....
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 46888999999999999999974 69999999997533 23344567899999986 777777776662110 01335
Q ss_pred cchhhhhhcccchhhhhhhc------------------------------cCccccccccCCceEEeecccccccCCCCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCDSS 296 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~~~ 296 (408)
..++++||+ .++.+..... +||.|++++.++..|++|||+++......
T Consensus 96 ~~~iv~Ey~-~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~- 173 (355)
T d2b1pa1 96 DVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF- 173 (355)
T ss_dssp EEEEEEECC-SEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred eeEEEEecc-chHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc-
Confidence 678999999 6654443321 89999999999999999999998764322
Q ss_pred eeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCc
Q 037624 297 NLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGE 330 (408)
Q Consensus 297 ~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~ 330 (408)
..+...||..| .++||||+||+++||++|+.||.
T Consensus 174 ~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~ 219 (355)
T d2b1pa1 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_dssp -------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCC
Confidence 23445677777 78999999999999999999985
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.1e-26 Score=216.40 Aligned_cols=156 Identities=22% Similarity=0.228 Sum_probs=115.3
Q ss_pred HhhcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--ccCCcceeeeEeEeee-cCCc
Q 037624 171 TEDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--PKYDIETLLSFMDFVC-IKDA 246 (408)
Q Consensus 171 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~~~n~~~l~~~~~~~~-~~~~ 246 (408)
++.|+..+.||+|+||+||+|+. .+|+.||||+++... .+....+.+.+|+++|. +|+|++++..++.... .+..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 45788899999999999999997 579999999997532 33344567899999997 8888888777733211 1223
Q ss_pred cchhhhhhcccchhhhhhhc--------------------------------cCccccccccCCceEEeecccccccCCC
Q 037624 247 CFWFMNTWRGEACSVFCTMI--------------------------------MKPLSWIGLRELEAFVADFGMTMHLYCD 294 (408)
Q Consensus 247 ~~~lv~e~~~~~g~l~~~l~--------------------------------~k~~~~~l~~~~~~ki~DfGla~~~~~~ 294 (408)
..+++++|+ .+|+|.+++. +||.|++++.++.+|++|||++......
T Consensus 96 ~~~~i~~~~-~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 96 NDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp CCCEEEEEC-CSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred ceEEEEEee-cCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcc
Confidence 345556677 7888888762 8999999999999999999999765432
Q ss_pred CCeeeecccCCCC-------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 295 SSNLTLLAGTYGY-------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 295 ~~~~~~~~gt~~y-------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
. ....||..| .++||||+||+++||+||+.||..
T Consensus 175 ~---~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~ 221 (348)
T d2gfsa1 175 M---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221 (348)
T ss_dssp G---SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred c---ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCC
Confidence 1 223344333 789999999999999999999863
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=4.2e-21 Score=180.77 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=99.8
Q ss_pred hcccceeecccceeEEEEEEe-CCCcEEEEEecccccCCCcchhhHHHHHHHHhc--c-----------cCCcceeeeEe
Q 037624 173 DFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDILY--P-----------KYDIETLLSFM 238 (408)
Q Consensus 173 ~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~--~-----------~~n~~~l~~~~ 238 (408)
.|...++||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|++++. . |+|+++++.+.
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~----~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~ 89 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 89 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc----ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence 388899999999999999997 57999999999742 223467788888774 2 45666665553
Q ss_pred EeeecCCccchhhhhhcccch-------------------------------hh-----hhhhccCccccccccCC----
Q 037624 239 DFVCIKDACFWFMNTWRGEAC-------------------------------SV-----FCTMIMKPLSWIGLREL---- 278 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g-------------------------------~l-----~~~l~~k~~~~~l~~~~---- 278 (408)
... ......+++++....+ -+ .-|.++||.|++++.++
T Consensus 90 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~ 167 (362)
T d1q8ya_ 90 NHK--GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN 167 (362)
T ss_dssp EEE--ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred eec--cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccc
Confidence 211 0111111111110000 01 11124899999998544
Q ss_pred --ceEEeecccccccCCCCCeeeecccCCCC------------cccchhhhhHHHHHHHhCCCCCcc
Q 037624 279 --EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILMGRQPGEL 331 (408)
Q Consensus 279 --~~ki~DfGla~~~~~~~~~~~~~~gt~~y------------~k~DVySfGvvl~Elltg~~p~~~ 331 (408)
.+|++|||.|+...... ...+||..| .++||||+||+++||+||+.||..
T Consensus 168 ~~~~kl~dfg~s~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~ 231 (362)
T d1q8ya_ 168 LIQIKIADLGNACWYDEHY---TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 231 (362)
T ss_dssp EEEEEECCCTTCEETTBCC---CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred cceeeEeeccccccccccc---ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCC
Confidence 48999999998654322 345677777 789999999999999999999863
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.59 E-value=4.9e-16 Score=142.59 Aligned_cols=103 Identities=33% Similarity=0.552 Sum_probs=88.0
Q ss_pred CCccccCCccCCeEeccC-CccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 2 IPLEIGSLRNLVSLYLSG-NNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~-N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
||++|++|++|++|||++ |+++|.+|.+|++|++| +|+|++|+++|..|..+.++..|+.+++++|.+.+.+|..++.
T Consensus 68 lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~ 147 (313)
T d1ogqa_ 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred CChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhcc
Confidence 788888888888888886 78888888888888888 8888888888888888888888888888888888888888888
Q ss_pred cc-cceeEeeccccccCCCccccccc
Q 037624 80 LP-LSYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 80 ~~-l~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
++ ++.+++++|.++|.+|..+....
T Consensus 148 l~~L~~l~l~~n~l~~~ip~~~~~l~ 173 (313)
T d1ogqa_ 148 LPNLVGITFDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCC
T ss_pred Ccccceeecccccccccccccccccc
Confidence 88 88888888888888887765543
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.51 E-value=1.7e-14 Score=122.36 Aligned_cols=105 Identities=25% Similarity=0.243 Sum_probs=92.4
Q ss_pred CCCccccCCccCCeEeccCCccccCC-Chhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSI-PSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLG 78 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~-p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~ 78 (408)
+||++|. +++++|+|++|+|++.+ +..|..+++| .|+|++|++++..|..+..+++|++|+|++|++++..|..|.
T Consensus 22 ~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~ 99 (192)
T d1w8aa_ 22 EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFL 99 (192)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSST
T ss_pred ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHh
Confidence 4788775 78999999999998766 4567899999 999999999988888999999999999999999988888899
Q ss_pred ccc-cceeEeeccccccCCCcccccccccc
Q 037624 79 VLP-LSYLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 79 ~~~-l~~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
.++ |+.|+|++|++++..|..+..+...+
T Consensus 100 ~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~ 129 (192)
T d1w8aa_ 100 GLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp TCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred CCCcccccccCCccccccCHHHhcCCcccc
Confidence 999 99999999999988888777665443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.47 E-value=4.6e-14 Score=110.56 Aligned_cols=88 Identities=28% Similarity=0.337 Sum_probs=76.2
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccC-CCcccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI-PYPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~-p~~~~~~~- 81 (408)
.++.+++|++|||++|.|+ .+|+.++.+++| .|++++|+++ .+| .++++++|++|++++|+++... +..++.++
T Consensus 15 ~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~ 91 (124)
T d1dcea3 15 HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 91 (124)
T ss_dssp CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCccCCCCCchhhcCCCC
Confidence 5888999999999999998 799899999999 9999999999 676 4899999999999999998433 24678888
Q ss_pred cceeEeeccccccC
Q 037624 82 LSYLDLSFNDLSGG 95 (408)
Q Consensus 82 l~~l~l~~n~l~g~ 95 (408)
|+.|++++|+++..
T Consensus 92 L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 92 LVLLNLQGNSLCQE 105 (124)
T ss_dssp CCEEECTTSGGGGS
T ss_pred CCEEECCCCcCCcC
Confidence 99999999998753
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.43 E-value=1.1e-13 Score=117.33 Aligned_cols=93 Identities=27% Similarity=0.294 Sum_probs=85.0
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
..|.++++|+.|+|++|++++..+..+..+++| .|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..++
T Consensus 48 ~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~ 127 (192)
T d1w8aa_ 48 GLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127 (192)
T ss_dssp CSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTT
T ss_pred cccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcc
Confidence 347889999999999999998889999999999 999999999966666789999999999999999988888999999
Q ss_pred cceeEeeccccccCC
Q 037624 82 LSYLDLSFNDLSGGI 96 (408)
Q Consensus 82 l~~l~l~~n~l~g~~ 96 (408)
|++|++++|.+.+..
T Consensus 128 L~~l~L~~N~~~~~~ 142 (192)
T d1w8aa_ 128 LTSLNLASNPFNCNC 142 (192)
T ss_dssp CCEEECTTCCBCCSG
T ss_pred ccccccccccccccc
Confidence 999999999987643
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.40 E-value=1.3e-13 Score=126.02 Aligned_cols=103 Identities=33% Similarity=0.549 Sum_probs=97.1
Q ss_pred CCCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGV 79 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~ 79 (408)
+||++|++|++|++|+|++|+++|..|..+..+..| .+++++|++.+.+|.++++++.|+.+++++|.++|.+|..++.
T Consensus 92 ~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~ 171 (313)
T d1ogqa_ 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171 (313)
T ss_dssp CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC
T ss_pred ccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccccccccccccccc
Confidence 489999999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred cc--cceeEeeccccccCCCcccccc
Q 037624 80 LP--LSYLDLSFNDLSGGIPKHLTTK 103 (408)
Q Consensus 80 ~~--l~~l~l~~n~l~g~~p~~~~~~ 103 (408)
+. ++.++++.|+++|..|..+...
T Consensus 172 l~~l~~~l~~~~n~l~~~~~~~~~~l 197 (313)
T d1ogqa_ 172 FSKLFTSMTISRNRLTGKIPPTFANL 197 (313)
T ss_dssp CCTTCCEEECCSSEEEEECCGGGGGC
T ss_pred cccccccccccccccccccccccccc
Confidence 87 5899999999999988876554
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.32 E-value=1.4e-12 Score=101.93 Aligned_cols=78 Identities=28% Similarity=0.362 Sum_probs=71.0
Q ss_pred CeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEeecc
Q 037624 13 VSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFN 90 (408)
Q Consensus 13 ~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n 90 (408)
+.|||++|+++ .+| .+..++.| +|||++|+|+ .+|+.++.+++|+.|++++|.++ .+| .++.++ |+.|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 57999999999 777 58999999 9999999999 89999999999999999999999 455 489999 999999999
Q ss_pred ccccC
Q 037624 91 DLSGG 95 (408)
Q Consensus 91 ~l~g~ 95 (408)
+++..
T Consensus 76 ~i~~~ 80 (124)
T d1dcea3 76 RLQQS 80 (124)
T ss_dssp CCCSS
T ss_pred ccCCC
Confidence 99854
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.32 E-value=3.2e-13 Score=114.29 Aligned_cols=109 Identities=13% Similarity=0.083 Sum_probs=69.1
Q ss_pred cceeecccceeEEEEEEeCCCcEEEEEecccccCCC---------------cchhhHHHHHHHHhc--ccCCcceeeeEe
Q 037624 176 IKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEE---------------PASTRSFQNEVDILY--PKYDIETLLSFM 238 (408)
Q Consensus 176 ~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~---------------~~~~~~~~~E~~~l~--~~~n~~~l~~~~ 238 (408)
..+.||+|+||+||+|+..+|+.||||.++...... ......+.+|...+. .|.+++..+.+
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~- 82 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW- 82 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE-
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe-
Confidence 468899999999999999899999999875321110 011223445666664 56666655443
Q ss_pred EeeecCCccchhhhhhcccchhhhhh------------------h--------ccCccccccccCCceEEeecccccccC
Q 037624 239 DFVCIKDACFWFMNTWRGEACSVFCT------------------M--------IMKPLSWIGLRELEAFVADFGMTMHLY 292 (408)
Q Consensus 239 ~~~~~~~~~~~lv~e~~~~~g~l~~~------------------l--------~~k~~~~~l~~~~~~ki~DfGla~~~~ 292 (408)
. ..++++||+ ++...... + ++||.|++++++ .++|+|||+|+...
T Consensus 83 ---~----~~~lvme~~-~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~ 153 (191)
T d1zara2 83 ---E----GNAVLMELI-DAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG 153 (191)
T ss_dssp ---E----TTEEEEECC-CCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred ---c----CCEEEEEee-ccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccCC
Confidence 1 123555655 33222111 1 389999999865 58999999998765
Q ss_pred CC
Q 037624 293 CD 294 (408)
Q Consensus 293 ~~ 294 (408)
.+
T Consensus 154 ~~ 155 (191)
T d1zara2 154 EE 155 (191)
T ss_dssp ST
T ss_pred CC
Confidence 33
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=2.8e-12 Score=104.45 Aligned_cols=91 Identities=23% Similarity=0.220 Sum_probs=67.6
Q ss_pred CCccccCCccCCeEeccCC-ccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCc-cc
Q 037624 2 IPLEIGSLRNLVSLYLSGN-NLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYP-LG 78 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N-~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~-~~ 78 (408)
+|..+..+++|+.|+|++| .++..-+.+|.++++| .|+|++|+|+..-|..|..+++|++|+|++|+|+ .+|.. +.
T Consensus 23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~ 101 (156)
T d2ifga3 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQ 101 (156)
T ss_dssp TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTC
T ss_pred CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhc
Confidence 5777778888888888765 4773334567888888 8888888888555667888888888888888888 45544 44
Q ss_pred ccccceeEeeccccc
Q 037624 79 VLPLSYLDLSFNDLS 93 (408)
Q Consensus 79 ~~~l~~l~l~~n~l~ 93 (408)
.++|+.|++++|++.
T Consensus 102 ~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 102 GLSLQELVLSGNPLH 116 (156)
T ss_dssp SCCCCEEECCSSCCC
T ss_pred cccccccccCCCccc
Confidence 444888888888875
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=2.4e-12 Score=105.58 Aligned_cols=88 Identities=20% Similarity=0.122 Sum_probs=76.7
Q ss_pred ccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 4 LEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 4 ~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
+++.++.+|+.|||++|+++ .||..+..+++| .||||+|+++ .+| .+..+++|++|+|++|+++...|..+..++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccc
Confidence 35678889999999999999 788777889999 9999999999 776 589999999999999999965555556788
Q ss_pred cceeEeecccccc
Q 037624 82 LSYLDLSFNDLSG 94 (408)
Q Consensus 82 l~~l~l~~n~l~g 94 (408)
|+.|++++|+++.
T Consensus 89 L~~L~L~~N~i~~ 101 (162)
T d1a9na_ 89 LTELILTNNSLVE 101 (162)
T ss_dssp CCEEECCSCCCCC
T ss_pred cccceeccccccc
Confidence 9999999999874
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=5.5e-12 Score=103.35 Aligned_cols=89 Identities=22% Similarity=0.262 Sum_probs=76.3
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCcc-ccCCCCCCEEEccCccccccCC--Ccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSE-IGNLQELSHLDSRHIFIKGTIP--YPL 77 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~-~~~l~~L~~l~l~~N~~~g~~p--~~~ 77 (408)
||..+..+++|+.||||+|+++ .++ .+..+++| +|+|++|+++ .+|.. +..+++|+.|+|++|+++. ++ ..+
T Consensus 33 i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~~L~L~~N~i~~-~~~l~~l 108 (162)
T d1a9na_ 33 IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVE-LGDLDPL 108 (162)
T ss_dssp CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCCC-GGGGGGG
T ss_pred cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhccccccc-CCCccccccccccccceeccccccc-ccccccc
Confidence 5665678999999999999999 775 58899999 9999999999 56655 5679999999999999984 44 467
Q ss_pred cccc-cceeEeecccccc
Q 037624 78 GVLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 78 ~~~~-l~~l~l~~n~l~g 94 (408)
..++ |+.|++++|+++.
T Consensus 109 ~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 109 ASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp GGCTTCCEEECCSSGGGG
T ss_pred ccccccchhhcCCCcccc
Confidence 8889 9999999999874
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=7.7e-12 Score=112.40 Aligned_cols=103 Identities=23% Similarity=0.178 Sum_probs=87.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.+..+++|+.+++++|+|++..|..+..+++| .|+|++|++++..|..+.++++|+.|++++|++++..|..+..++ |
T Consensus 124 ~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L 203 (284)
T d1ozna_ 124 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred ccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhc
Confidence 46678899999999999995556678889999 899999999976677888999999999999999998899999999 9
Q ss_pred ceeEeeccccccCCCcccccccccc
Q 037624 83 SYLDLSFNDLSGGIPKHLTTKLRRK 107 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~~~~~~~~~ 107 (408)
+.|++++|.+++..|..+......+
T Consensus 204 ~~L~l~~N~i~~~~~~~~~~~~~L~ 228 (284)
T d1ozna_ 204 MTLYLFANNLSALPTEALAPLRALQ 228 (284)
T ss_dssp CEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred ccccccccccccccccccccccccC
Confidence 9999999999987777776654443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=3.1e-11 Score=108.31 Aligned_cols=103 Identities=23% Similarity=0.173 Sum_probs=89.7
Q ss_pred CccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc
Q 037624 3 PLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP 81 (408)
Q Consensus 3 p~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~ 81 (408)
|..+.++++|++|+|++|.+.+..+..+..+++| .+++++|+|++..|..+..+++|+.|+|++|++++..|..+..++
T Consensus 98 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~ 177 (284)
T d1ozna_ 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 177 (284)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred chhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccc
Confidence 5568899999999999999986667778889999 999999999955556788899999999999999988888899999
Q ss_pred -cceeEeeccccccCCCcccccccc
Q 037624 82 -LSYLDLSFNDLSGGIPKHLTTKLR 105 (408)
Q Consensus 82 -l~~l~l~~n~l~g~~p~~~~~~~~ 105 (408)
|+.+++++|.+++..|..+..+.+
T Consensus 178 ~L~~l~l~~N~l~~i~~~~f~~l~~ 202 (284)
T d1ozna_ 178 SLDRLLLHQNRVAHVHPHAFRDLGR 202 (284)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTT
T ss_pred ccchhhhhhccccccChhHhhhhhh
Confidence 999999999999888888876644
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=9.1e-11 Score=104.20 Aligned_cols=104 Identities=27% Similarity=0.165 Sum_probs=85.2
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|..+.++++|+.|+|++|.+.+..+..+..+.++ .|++++|.+++.-|..+..+++|+.|++++|++++..|..+..+
T Consensus 92 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l 171 (266)
T d1p9ag_ 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL 171 (266)
T ss_dssp CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTC
T ss_pred cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccc
Confidence 46678889999999999999986667777888888 89999999985445566778999999999999998777888888
Q ss_pred c-cceeEeeccccccCCCccccccccc
Q 037624 81 P-LSYLDLSFNDLSGGIPKHLTTKLRR 106 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g~~p~~~~~~~~~ 106 (408)
+ |+.|+|++|+++ .+|..+......
T Consensus 172 ~~L~~L~Ls~N~L~-~lp~~~~~~~~L 197 (266)
T d1p9ag_ 172 ENLDTLLLQENSLY-TIPKGFFGSHLL 197 (266)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCCC
T ss_pred cccceeecccCCCc-ccChhHCCCCCC
Confidence 8 999999999998 777766554433
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.4e-10 Score=102.90 Aligned_cols=98 Identities=30% Similarity=0.219 Sum_probs=78.3
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++.+++|+.|+|++|+++ .+|..+..+++| .|+|++|.+.+..+..+..+.+|+.|++++|.+++..|..+..++ ++
T Consensus 73 ~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~ 151 (266)
T d1p9ag_ 73 DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151 (266)
T ss_dssp CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccccccccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccch
Confidence 567888888888888888 567788888888 888888888866666777888888888888888866666777777 88
Q ss_pred eeEeeccccccCCCccccccc
Q 037624 84 YLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 84 ~l~l~~n~l~g~~p~~~~~~~ 104 (408)
.+++++|++++..+..+..+.
T Consensus 152 ~l~l~~N~l~~~~~~~~~~l~ 172 (266)
T d1p9ag_ 152 KLSLANNNLTELPAGLLNGLE 172 (266)
T ss_dssp EEECTTSCCSCCCTTTTTTCT
T ss_pred hcccccccccccCcccccccc
Confidence 888888888877766665543
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.05 E-value=2e-10 Score=103.93 Aligned_cols=86 Identities=26% Similarity=0.236 Sum_probs=69.6
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeE
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~ 86 (408)
+++|+.|++++|..++..|..+..++.+ .|++++|.+++..|..+.++++|++|+|++|+|+ .+|..+..++ |+.|+
T Consensus 170 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~ 248 (305)
T d1xkua_ 170 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 248 (305)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEE
Confidence 5678888888888887778888888888 8888888888666777888888888888888887 6777888888 88888
Q ss_pred eeccccccC
Q 037624 87 LSFNDLSGG 95 (408)
Q Consensus 87 l~~n~l~g~ 95 (408)
+++|+++..
T Consensus 249 Ls~N~i~~i 257 (305)
T d1xkua_ 249 LHNNNISAI 257 (305)
T ss_dssp CCSSCCCCC
T ss_pred CCCCccCcc
Confidence 888887743
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.04 E-value=6.3e-12 Score=106.64 Aligned_cols=88 Identities=24% Similarity=0.245 Sum_probs=76.3
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCccccc
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL 80 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~ 80 (408)
+|.+++.|++|++|+|++|+++ .++ .+..|++| .|+|++|+++ .+|.....+++|+.|++++|+++. ++ .+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHH
T ss_pred hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccccc
Confidence 4567889999999999999999 776 69999999 9999999998 888777777899999999999984 43 47788
Q ss_pred c-cceeEeecccccc
Q 037624 81 P-LSYLDLSFNDLSG 94 (408)
Q Consensus 81 ~-l~~l~l~~n~l~g 94 (408)
+ |+.|++++|.++.
T Consensus 115 ~~L~~L~L~~N~i~~ 129 (198)
T d1m9la_ 115 VNLRVLYMSNNKITN 129 (198)
T ss_dssp HHSSEEEESEEECCC
T ss_pred ccccccccccchhcc
Confidence 8 9999999999874
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.02 E-value=3e-10 Score=102.78 Aligned_cols=94 Identities=23% Similarity=0.164 Sum_probs=80.6
Q ss_pred CCccccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCC-----
Q 037624 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPY----- 75 (408)
Q Consensus 2 ip~~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~----- 75 (408)
+|..+.++++++.|++++|.+++..|..+..+++| +|+|++|+|+ .||.++.++++|++|+|++|+++ .++.
T Consensus 187 ~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~ 264 (305)
T d1xkua_ 187 DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCP 264 (305)
T ss_dssp CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSC
T ss_pred ChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccC-ccChhhccC
Confidence 45678899999999999999998778889999999 9999999999 89999999999999999999998 4543
Q ss_pred --cccccc-cceeEeeccccc-cCCC
Q 037624 76 --PLGVLP-LSYLDLSFNDLS-GGIP 97 (408)
Q Consensus 76 --~~~~~~-l~~l~l~~n~l~-g~~p 97 (408)
....+. |+.|++++|++. ..++
T Consensus 265 ~~~~~~~~~L~~L~L~~N~~~~~~~~ 290 (305)
T d1xkua_ 265 PGYNTKKASYSGVSLFSNPVQYWEIQ 290 (305)
T ss_dssp SSCCTTSCCCSEEECCSSSSCGGGSC
T ss_pred cchhcccCCCCEEECCCCcCccCcCC
Confidence 233455 999999999975 3443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=3.8e-10 Score=91.52 Aligned_cols=94 Identities=21% Similarity=0.195 Sum_probs=80.4
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccc-cccccC-ccccCCCCCCEEEccCccccccCCCcccccc-
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNK-LSGSIP-SEIGNLQELSHLDSRHIFIKGTIPYPLGVLP- 81 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~-l~g~iP-~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~- 81 (408)
.+.....+.++.++|++. .+|..+..+++| .|+|++|+ ++ .|| ..|.++++|+.|+|++|+|+...|..+..++
T Consensus 4 ~C~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 81 (156)
T d2ifga3 4 ACCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81 (156)
T ss_dssp SSCCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSC
T ss_pred CCCcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCcccc-ccCchhhccccccCcceeeccccCCccccccccccc
Confidence 456667788999999999 889999999999 99998765 88 565 5799999999999999999988788899999
Q ss_pred cceeEeeccccccCCCcccc
Q 037624 82 LSYLDLSFNDLSGGIPKHLT 101 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p~~~~ 101 (408)
|+.|+|++|+++...+..+.
T Consensus 82 L~~L~Ls~N~l~~l~~~~~~ 101 (156)
T d2ifga3 82 LSRLNLSFNALESLSWKTVQ 101 (156)
T ss_dssp CCEEECCSSCCSCCCSTTTC
T ss_pred ccceeccCCCCcccChhhhc
Confidence 99999999999954444443
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.92 E-value=5.8e-10 Score=103.84 Aligned_cols=85 Identities=27% Similarity=0.363 Sum_probs=48.8
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
+.+++.++.++++.|++++ + ..+..++.+ .|+|++|++++ +| .+..+++|++|+|++|++++ +| .++.++ |+
T Consensus 281 ~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~-l~-~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~ 354 (384)
T d2omza2 281 LAGLTALTNLELNENQLED-I-SPISNLKNLTYLTLYFNNISD-IS-PVSSLTKLQRLFFANNKVSD-VS-SLANLTNIN 354 (384)
T ss_dssp GTTCTTCSEEECCSSCCSC-C-GGGGGCTTCSEEECCSSCCSC-CG-GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCC
T ss_pred ccccccccccccccccccc-c-cccchhcccCeEECCCCCCCC-Cc-ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCC
Confidence 4455566666666666663 2 245556666 66666666663 33 25566666666666666653 33 355666 66
Q ss_pred eeEeeccccccCC
Q 037624 84 YLDLSFNDLSGGI 96 (408)
Q Consensus 84 ~l~l~~n~l~g~~ 96 (408)
.|++++|++++..
T Consensus 355 ~L~l~~N~l~~l~ 367 (384)
T d2omza2 355 WLSAGHNQISDLT 367 (384)
T ss_dssp EEECCSSCCCBCG
T ss_pred EEECCCCcCCCCh
Confidence 6666666666543
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.91 E-value=1.4e-11 Score=104.35 Aligned_cols=90 Identities=24% Similarity=0.164 Sum_probs=76.8
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCC-Ccccccc-
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIP-YPLGVLP- 81 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p-~~~~~~~- 81 (408)
.+..+++|+.|+|++|+++ .+|.....++.| .|++++|+++ .+| .+.++++|+.|+|++|+++.... ..+..++
T Consensus 65 ~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~ 141 (198)
T d1m9la_ 65 SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDK 141 (198)
T ss_dssp CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTT
T ss_pred cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccccccccccccccchhccccccccccCCCc
Confidence 5788999999999999998 888777778889 9999999999 565 48899999999999999984322 4688899
Q ss_pred cceeEeeccccccCCC
Q 037624 82 LSYLDLSFNDLSGGIP 97 (408)
Q Consensus 82 l~~l~l~~n~l~g~~p 97 (408)
|+.|++++|+++...+
T Consensus 142 L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 142 LEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEECSSHHHHHHC
T ss_pred cceeecCCCccccCcc
Confidence 9999999999875444
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.79 E-value=3.9e-09 Score=89.08 Aligned_cols=80 Identities=28% Similarity=0.361 Sum_probs=43.5
Q ss_pred CccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeE
Q 037624 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 9 l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~ 86 (408)
+.+|+.|++++|.++ .++ .+..+++| +|+|++|++++ +|. ++++++|++|++++|.+. .+| .+..++ |+.|+
T Consensus 39 l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccC-ccc-ccCCcccccccccccccc-ccc-cccccccccccc
Confidence 455566666666655 443 35555666 56666666653 332 555666666666666554 233 245555 55666
Q ss_pred eecccccc
Q 037624 87 LSFNDLSG 94 (408)
Q Consensus 87 l~~n~l~g 94 (408)
+++|....
T Consensus 113 l~~~~~~~ 120 (199)
T d2omxa2 113 LFNNQITD 120 (199)
T ss_dssp CCSSCCCC
T ss_pred cccccccc
Confidence 55555543
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.77 E-value=4.9e-09 Score=90.37 Aligned_cols=81 Identities=35% Similarity=0.457 Sum_probs=38.0
Q ss_pred cCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cce
Q 037624 7 GSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSY 84 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~ 84 (408)
...+.+..+.++++.+... ..+..+++| .|++++|.+++ ++ .++++++|+.|+|++|++++ +|. ++.++ |++
T Consensus 126 ~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~ 199 (227)
T d1h6ua2 126 AGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD-LT-PLANLSKLTTLKADDNKISD-ISP-LASLPNLIE 199 (227)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCE
T ss_pred ccccchhhhhchhhhhchh--hhhcccccccccccccccccc-ch-hhcccccceecccCCCccCC-Chh-hcCCCCCCE
Confidence 3344455555555555421 124444555 55555555542 22 24455555555555555542 222 44445 555
Q ss_pred eEeeccccc
Q 037624 85 LDLSFNDLS 93 (408)
Q Consensus 85 l~l~~n~l~ 93 (408)
|++++|+++
T Consensus 200 L~Ls~N~lt 208 (227)
T d1h6ua2 200 VHLKNNQIS 208 (227)
T ss_dssp EECTTSCCC
T ss_pred EECcCCcCC
Confidence 555555554
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.72 E-value=1.1e-08 Score=87.14 Aligned_cols=80 Identities=26% Similarity=0.370 Sum_probs=56.4
Q ss_pred CCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-ccee
Q 037624 8 SLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYL 85 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l 85 (408)
.|.+|+.|++++|.++ .++ .+..+++| +|+|++|++++ +| .++++++|++|++++|++++ +| .+..++ |+.|
T Consensus 44 ~L~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCC-Cch-hHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-ccccccccccc
Confidence 3567777788877777 444 36777777 78888887773 54 35677778888888777773 44 366677 7777
Q ss_pred Eeeccccc
Q 037624 86 DLSFNDLS 93 (408)
Q Consensus 86 ~l~~n~l~ 93 (408)
++++|.+.
T Consensus 118 ~l~~~~~~ 125 (210)
T d1h6ta2 118 SLEHNGIS 125 (210)
T ss_dssp ECTTSCCC
T ss_pred cccccccc
Confidence 77777765
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=9.5e-09 Score=89.24 Aligned_cols=92 Identities=22% Similarity=0.281 Sum_probs=77.4
Q ss_pred CCCccccCCccCCeEeccCCccccCCCh-hhcccccc-EEEccccccccccCc-cccCCCCCCEEEccC-ccccccCCCc
Q 037624 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPS-SLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRH-IFIKGTIPYP 76 (408)
Q Consensus 1 ~ip~~~~~l~~l~~L~l~~N~l~g~~p~-~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~-N~~~g~~p~~ 76 (408)
+||+++. +++++|||++|+++ .+|. .|.++++| +|+|++|.+...+|. .+.+++.++.|++.. |++....|..
T Consensus 22 ~iP~~l~--~~l~~L~Ls~n~i~-~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~ 98 (242)
T d1xwdc1 22 EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 98 (242)
T ss_dssp SCCSCSC--SCCSEEEEESCCCC-EECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTS
T ss_pred CcCCCCC--CCCCEEECcCCcCC-ccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccc
Confidence 4677664 58999999999999 5655 68899999 999999999877765 678899999999865 7888788888
Q ss_pred ccccc-cceeEeeccccccC
Q 037624 77 LGVLP-LSYLDLSFNDLSGG 95 (408)
Q Consensus 77 ~~~~~-l~~l~l~~n~l~g~ 95 (408)
+..++ |+.+++++|.+...
T Consensus 99 ~~~l~~L~~l~l~~~~l~~~ 118 (242)
T d1xwdc1 99 FQNLPNLQYLLISNTGIKHL 118 (242)
T ss_dssp EECCTTCCEEEEESCCCCSC
T ss_pred ccccccccccccchhhhccc
Confidence 89999 99999999998754
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.66 E-value=2.3e-08 Score=84.23 Aligned_cols=83 Identities=31% Similarity=0.466 Sum_probs=43.9
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
++++++|+.|++++|.+. .+| .+..++.| .|++++|.+.. ++ .+..+++|+.|++++|++. .+| .+..++ ++
T Consensus 80 l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~~~~~~-~~-~~~~l~~L~~L~l~~n~l~-~~~-~l~~~~~L~ 153 (199)
T d2omxa2 80 LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTLFNNQITD-ID-PLKNLTNLNRLELSSNTIS-DIS-ALSGLTSLQ 153 (199)
T ss_dssp GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCC-CCG-GGTTCTTCS
T ss_pred ccCCcccccccccccccc-ccc-cccccccccccccccccccc-cc-ccchhhhhHHhhhhhhhhc-ccc-ccccccccc
Confidence 666667777777777665 444 35555555 55555555542 22 2445555555555555554 222 244444 55
Q ss_pred eeEeecccccc
Q 037624 84 YLDLSFNDLSG 94 (408)
Q Consensus 84 ~l~l~~n~l~g 94 (408)
.|++++|.+++
T Consensus 154 ~L~l~~n~l~~ 164 (199)
T d2omxa2 154 QLNFSSNQVTD 164 (199)
T ss_dssp EEECCSSCCCC
T ss_pred ccccccccccC
Confidence 55555555443
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.65 E-value=2.5e-08 Score=84.70 Aligned_cols=92 Identities=30% Similarity=0.335 Sum_probs=75.6
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.++++++|+.|++++|.++ .++ .+..++.| .+++++|.+++ +..+.++++|+.+++++|++++ ++. +.+++ |
T Consensus 107 ~l~~l~~L~~L~l~~~~~~-~~~-~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~~-l~~l~~L 180 (210)
T d1h6ta2 107 SLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IVP-LAGLTKL 180 (210)
T ss_dssp GGTTCTTCCEEECTTSCCC-CCG-GGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTC
T ss_pred ccccccccccccccccccc-ccc-cccccccccccccccccccc--cccccccccccccccccccccc-ccc-ccCCCCC
Confidence 5888999999999999987 454 68899999 99999999984 3457889999999999999985 443 88899 9
Q ss_pred ceeEeeccccccCCCccccccc
Q 037624 83 SYLDLSFNDLSGGIPKHLTTKL 104 (408)
Q Consensus 83 ~~l~l~~n~l~g~~p~~~~~~~ 104 (408)
+.|++++|+++. +| .+..+.
T Consensus 181 ~~L~Ls~N~i~~-l~-~l~~l~ 200 (210)
T d1h6ta2 181 QNLYLSKNHISD-LR-ALAGLK 200 (210)
T ss_dssp CEEECCSSCCCB-CG-GGTTCT
T ss_pred CEEECCCCCCCC-Ch-hhcCCC
Confidence 999999999884 44 344443
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.60 E-value=3.1e-08 Score=91.76 Aligned_cols=79 Identities=33% Similarity=0.460 Sum_probs=44.2
Q ss_pred ccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cc
Q 037624 6 IGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LS 83 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~ 83 (408)
+..+++++.|+|++|++++ ++ .+..+++| .|+|++|+++ .+| .+++|++|++|+|++|++++.+| +..++ |+
T Consensus 303 ~~~~~~l~~L~ls~n~l~~-l~-~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~ 376 (384)
T d2omza2 303 ISNLKNLTYLTLYFNNISD-IS-PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISDLTP--LANLTRIT 376 (384)
T ss_dssp GGGCTTCSEEECCSSCCSC-CG-GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCS
T ss_pred cchhcccCeEECCCCCCCC-Cc-ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCCChh--hccCCCCC
Confidence 4455556666666666653 33 25556666 5666666665 343 45556666666666666654433 55555 66
Q ss_pred eeEeecc
Q 037624 84 YLDLSFN 90 (408)
Q Consensus 84 ~l~l~~n 90 (408)
.|++++|
T Consensus 377 ~L~L~~N 383 (384)
T d2omza2 377 QLGLNDQ 383 (384)
T ss_dssp EEECCCE
T ss_pred EeeCCCC
Confidence 6666555
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.38 E-value=2.4e-07 Score=79.33 Aligned_cols=79 Identities=23% Similarity=0.336 Sum_probs=60.5
Q ss_pred cccCCccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-c
Q 037624 5 EIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 5 ~~~~l~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l 82 (408)
.+.++++|+.|++++|.+++ ++ .++++++| .|||++|+++ .+|. ++++++|++|+|++|++++ +|. +++++ |
T Consensus 146 ~~~~~~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~Ls~n~l~-~l~~-l~~l~~L~~L~Ls~N~lt~-i~~-l~~l~~L 219 (227)
T d1h6ua2 146 PLAGLTNLQYLSIGNAQVSD-LT-PLANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHLKNNQISD-VSP-LANTSNL 219 (227)
T ss_dssp GGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECTTSCCCB-CGG-GTTCTTC
T ss_pred hhcccccccccccccccccc-ch-hhcccccceecccCCCccC-CChh-hcCCCCCCEEECcCCcCCC-Ccc-cccCCCC
Confidence 45677788888888888873 33 47888888 8888888888 4554 7888888888888888884 443 77888 8
Q ss_pred ceeEeec
Q 037624 83 SYLDLSF 89 (408)
Q Consensus 83 ~~l~l~~ 89 (408)
+.|++++
T Consensus 220 ~~L~lsn 226 (227)
T d1h6ua2 220 FIVTLTN 226 (227)
T ss_dssp CEEEEEE
T ss_pred CEEEeeC
Confidence 8888864
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.36 E-value=4.1e-07 Score=82.71 Aligned_cols=72 Identities=31% Similarity=0.348 Sum_probs=51.2
Q ss_pred ccCCeEeccCCccccCCChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEe
Q 037624 10 RNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDL 87 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l 87 (408)
.+|+.|||++|.++ .+|+. +++| +|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.- .+ |++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 36788888888887 68853 4677 7888888888 788654 46777778887776 44421 12 777788
Q ss_pred eccccc
Q 037624 88 SFNDLS 93 (408)
Q Consensus 88 ~~n~l~ 93 (408)
++|.+.
T Consensus 106 ~~n~l~ 111 (353)
T d1jl5a_ 106 SNNQLE 111 (353)
T ss_dssp CSSCCS
T ss_pred cccccc
Confidence 877776
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=4.3e-08 Score=79.58 Aligned_cols=69 Identities=25% Similarity=0.164 Sum_probs=33.8
Q ss_pred CChhhcccccc-EEEcccccccc--ccCccccCCCCCCEEEccCccccccCCC-c-ccccccceeEeeccccccC
Q 037624 26 IPSSLGRLTSC-TLTLSNNKLSG--SIPSEIGNLQELSHLDSRHIFIKGTIPY-P-LGVLPLSYLDLSFNDLSGG 95 (408)
Q Consensus 26 ~p~~~~~l~~L-~L~ls~N~l~g--~iP~~~~~l~~L~~l~l~~N~~~g~~p~-~-~~~~~l~~l~l~~n~l~g~ 95 (408)
++.....++.| +|+||+|+++. .++..+..|++|+.|||++|.++. ++. . +....|+.|++++|+++..
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCcC
Confidence 33333455556 56666666652 122334455666666666666652 222 1 1222255566666655543
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.20 E-value=1.1e-06 Score=79.68 Aligned_cols=58 Identities=28% Similarity=0.358 Sum_probs=41.8
Q ss_pred ccccc-EEEccccccccccCccccCCCCCCEEEccCccccccCCCcccccc-cceeEeeccccccCCCc
Q 037624 32 RLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIPK 98 (408)
Q Consensus 32 ~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~l~~n~l~g~~p~ 98 (408)
.+++| +|+|++|+|+ .+|.. +++|+.|+|++|+|+ .+|.. ++ |+.|++++|+++ .+|.
T Consensus 282 ~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 282 LPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred cCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCc
Confidence 35678 7888888888 77754 467888888888887 67653 34 778888888876 4443
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=2.8e-08 Score=80.71 Aligned_cols=83 Identities=27% Similarity=0.209 Sum_probs=56.1
Q ss_pred cCCccCCeEeccCCccccC--CChhhcccccc-EEEccccccccccCc-cccCCCCCCEEEccCccccccCCCc------
Q 037624 7 GSLRNLVSLYLSGNNLTGS--IPSSLGRLTSC-TLTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYP------ 76 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~g~--~p~~~~~l~~L-~L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~------ 76 (408)
.++++|++|+||+|+++.. ++..+..|++| .|||++|+++ .+++ ......+|+.|+|++|.++......
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 3577888888888888831 23456778888 8888888888 5554 3334457888888888887655432
Q ss_pred -ccccc-cceeEeecccc
Q 037624 77 -LGVLP-LSYLDLSFNDL 92 (408)
Q Consensus 77 -~~~~~-l~~l~l~~n~l 92 (408)
+..+| |+.|| ++.+
T Consensus 141 i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 141 IRERFPKLLRLD--GHEL 156 (162)
T ss_dssp HHTTSTTCCEET--TEEC
T ss_pred HHHHCCCCCEEC--cCCC
Confidence 34556 76665 4444
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=9.2e-07 Score=76.25 Aligned_cols=75 Identities=23% Similarity=0.167 Sum_probs=37.8
Q ss_pred cCCeEeccCCccccCCChhhcccccc-E-EEccccccccccCc-cccCCCCCCEEEccCccccccCCCcccccc-cceeE
Q 037624 11 NLVSLYLSGNNLTGSIPSSLGRLTSC-T-LTLSNNKLSGSIPS-EIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLD 86 (408)
Q Consensus 11 ~l~~L~l~~N~l~g~~p~~~~~l~~L-~-L~ls~N~l~g~iP~-~~~~l~~L~~l~l~~N~~~g~~p~~~~~~~-l~~l~ 86 (408)
.++.|++++|+++ .++....+.+++ . +++++|+++ .+|. .+.++++|++|+|++|+++...+..+.+++ |+.++
T Consensus 154 ~l~~L~l~~n~l~-~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~ 231 (242)
T d1xwdc1 154 ESVILWLNKNGIQ-EIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 231 (242)
T ss_dssp SCEEEECCSSCCC-EECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSS
T ss_pred cceeeeccccccc-ccccccccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCc
Confidence 4555555555555 444444444444 3 344555555 4444 245556666666666665532233345555 55544
Q ss_pred e
Q 037624 87 L 87 (408)
Q Consensus 87 l 87 (408)
+
T Consensus 232 ~ 232 (242)
T d1xwdc1 232 T 232 (242)
T ss_dssp E
T ss_pred C
Confidence 4
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=1e-06 Score=82.88 Aligned_cols=87 Identities=25% Similarity=0.286 Sum_probs=53.6
Q ss_pred cCCccCCeEeccCCccc----cCCChhhcccccc-EEEcccccccc----ccCcccc-CCCCCCEEEccCcccccc----
Q 037624 7 GSLRNLVSLYLSGNNLT----GSIPSSLGRLTSC-TLTLSNNKLSG----SIPSEIG-NLQELSHLDSRHIFIKGT---- 72 (408)
Q Consensus 7 ~~l~~l~~L~l~~N~l~----g~~p~~~~~l~~L-~L~ls~N~l~g----~iP~~~~-~l~~L~~l~l~~N~~~g~---- 72 (408)
..++++++|+|++|+++ ..|+..+..+++| .|||++|+++. .+...+. ...+|++|+|++|+++..
T Consensus 24 ~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~ 103 (460)
T d1z7xw1 24 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 103 (460)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred HhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCcccccccc
Confidence 34667777777777766 2344556667777 77777777751 1222222 224677777777777542
Q ss_pred CCCcccccc-cceeEeeccccc
Q 037624 73 IPYPLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 73 ~p~~~~~~~-l~~l~l~~n~l~ 93 (408)
++..+...+ |++|++++|.++
T Consensus 104 l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 104 LSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp HHHHTTSCTTCCEEECCSSBCH
T ss_pred ccchhhccccccccccccccch
Confidence 445566666 777777777665
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=1.3e-06 Score=77.52 Aligned_cols=85 Identities=20% Similarity=0.152 Sum_probs=62.3
Q ss_pred ccCCccCCeEeccCCccccC-CChhhcccccc-EEEccccccccccCccccCCCCCCEEEccCc-ccccc-CCCcccccc
Q 037624 6 IGSLRNLVSLYLSGNNLTGS-IPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHI-FIKGT-IPYPLGVLP 81 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~-~p~~~~~l~~L-~L~ls~N~l~g~iP~~~~~l~~L~~l~l~~N-~~~g~-~p~~~~~~~ 81 (408)
.....+|++|||++|.++.. ++.-+.+|++| +|+|++|++++..+..++++++|++|+|+++ .++.. +..-...++
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH
Confidence 34566888999998888744 44556778888 8999999888888888888889999999884 55421 222234567
Q ss_pred -cceeEeecc
Q 037624 82 -LSYLDLSFN 90 (408)
Q Consensus 82 -l~~l~l~~n 90 (408)
|++|+++++
T Consensus 122 ~L~~L~ls~c 131 (284)
T d2astb2 122 RLDELNLSWC 131 (284)
T ss_dssp TCCEEECCCC
T ss_pred hccccccccc
Confidence 888888874
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=6.5e-06 Score=72.74 Aligned_cols=81 Identities=27% Similarity=0.277 Sum_probs=55.4
Q ss_pred ccCCeEeccCC--cccc-CCChhhcccccc-EEEcccc-ccccccCccccCCCCCCEEEccC-ccccccCCCcccccc-c
Q 037624 10 RNLVSLYLSGN--NLTG-SIPSSLGRLTSC-TLTLSNN-KLSGSIPSEIGNLQELSHLDSRH-IFIKGTIPYPLGVLP-L 82 (408)
Q Consensus 10 ~~l~~L~l~~N--~l~g-~~p~~~~~l~~L-~L~ls~N-~l~g~iP~~~~~l~~L~~l~l~~-N~~~g~~p~~~~~~~-l 82 (408)
++|+.|+|++. .++. .+..-..++++| .|+|++| .+++..+..++++++|++|+|++ +.++..-+..++.++ |
T Consensus 148 ~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L 227 (284)
T d2astb2 148 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 227 (284)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred cccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCC
Confidence 57788888754 3432 233334567778 7888775 46766777777888888888887 467666666677777 8
Q ss_pred ceeEeecc
Q 037624 83 SYLDLSFN 90 (408)
Q Consensus 83 ~~l~l~~n 90 (408)
+.|+++++
T Consensus 228 ~~L~l~~~ 235 (284)
T d2astb2 228 KTLQVFGI 235 (284)
T ss_dssp CEEECTTS
T ss_pred CEEeeeCC
Confidence 88887765
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.65 E-value=2.5e-06 Score=77.64 Aligned_cols=87 Identities=21% Similarity=0.175 Sum_probs=49.6
Q ss_pred CCccCCeEeccCCcccc----CCChhhcccccc-EEEccccccccc-----cCccccCCCCCCEEEccCcccccc----C
Q 037624 8 SLRNLVSLYLSGNNLTG----SIPSSLGRLTSC-TLTLSNNKLSGS-----IPSEIGNLQELSHLDSRHIFIKGT----I 73 (408)
Q Consensus 8 ~l~~l~~L~l~~N~l~g----~~p~~~~~l~~L-~L~ls~N~l~g~-----iP~~~~~l~~L~~l~l~~N~~~g~----~ 73 (408)
..+.|+.|++++|+++- .+...+..++.| .|+|++|+++.. +...+..+++|+.|+|++|.++.. +
T Consensus 156 ~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L 235 (344)
T d2ca6a1 156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 235 (344)
T ss_dssp TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred cCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence 34566677777766652 233334555666 677777766521 233455666677777777766432 3
Q ss_pred CCcccccc-cceeEeecccccc
Q 037624 74 PYPLGVLP-LSYLDLSFNDLSG 94 (408)
Q Consensus 74 p~~~~~~~-l~~l~l~~n~l~g 94 (408)
...+...+ |+.|++++|.+++
T Consensus 236 ~~~l~~~~~L~~L~Ls~n~i~~ 257 (344)
T d2ca6a1 236 AIALKSWPNLRELGLNDCLLSA 257 (344)
T ss_dssp HHHGGGCTTCCEEECTTCCCCH
T ss_pred cccccccccchhhhhhcCccCc
Confidence 33445555 6777777776653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=5.6e-06 Score=77.62 Aligned_cols=84 Identities=26% Similarity=0.211 Sum_probs=53.2
Q ss_pred ccCCeEeccCCccccCCChh----hcccccc-EEEccccccccc----cCcccc-CCCCCCEEEccCcccccc----CCC
Q 037624 10 RNLVSLYLSGNNLTGSIPSS----LGRLTSC-TLTLSNNKLSGS----IPSEIG-NLQELSHLDSRHIFIKGT----IPY 75 (408)
Q Consensus 10 ~~l~~L~l~~N~l~g~~p~~----~~~l~~L-~L~ls~N~l~g~----iP~~~~-~l~~L~~l~l~~N~~~g~----~p~ 75 (408)
+.|+.+++++|.++..-... +..+++| +|+|++|+++.. ++..+. ..+.|++|+|++|+|+.. ++.
T Consensus 312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~ 391 (460)
T d1z7xw1 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 391 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH
Confidence 46777777777776443222 3344567 788888877632 444443 356688888888887632 444
Q ss_pred cccccc-cceeEeeccccc
Q 037624 76 PLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 76 ~~~~~~-l~~l~l~~n~l~ 93 (408)
.+...+ |++|++++|+++
T Consensus 392 ~l~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 392 TLLANHSLRELDLSNNCLG 410 (460)
T ss_dssp HHHHCCCCCEEECCSSSCC
T ss_pred HHhcCCCCCEEECCCCcCC
Confidence 455556 788888887766
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.56 E-value=6.1e-06 Score=74.96 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=63.1
Q ss_pred ccCCccCCeEeccCCccccC-----CChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCccccccCCC
Q 037624 6 IGSLRNLVSLYLSGNNLTGS-----IPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKGTIPY 75 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g~-----~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g~~p~ 75 (408)
+...++|+.|+|++|+++.. +...+..+++| .|+|++|.++.. +...+..+++|++|+|++|.+++.-..
T Consensus 182 l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~ 261 (344)
T d2ca6a1 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261 (344)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred hhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhH
Confidence 45567889999999988632 33446677888 899999988632 455677888999999999988754222
Q ss_pred cc----cc--cc-cceeEeecccccc
Q 037624 76 PL----GV--LP-LSYLDLSFNDLSG 94 (408)
Q Consensus 76 ~~----~~--~~-l~~l~l~~n~l~g 94 (408)
.+ .. .. |+.|++++|+++.
T Consensus 262 ~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 262 AVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHHhhhccCCCCCEEECCCCcCCh
Confidence 22 11 23 8889999988764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.14 E-value=5.4e-05 Score=60.93 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=62.7
Q ss_pred cCCccCCeEeccCC-ccccC----CChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCcccccc----
Q 037624 7 GSLRNLVSLYLSGN-NLTGS----IPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKGT---- 72 (408)
Q Consensus 7 ~~l~~l~~L~l~~N-~l~g~----~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g~---- 72 (408)
.+.++|+.|+|+++ .++.. +-..+...+.| .|+|++|.++-. +-..+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 35689999999974 45522 33356677889 999999999732 223445678999999999999753
Q ss_pred CCCcccccc-cceeEeeccccc
Q 037624 73 IPYPLGVLP-LSYLDLSFNDLS 93 (408)
Q Consensus 73 ~p~~~~~~~-l~~l~l~~n~l~ 93 (408)
+-..+...+ |+.|++++|...
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 223455556 999999998755
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.92 E-value=0.00011 Score=58.92 Aligned_cols=86 Identities=10% Similarity=0.093 Sum_probs=60.7
Q ss_pred ccCCccCCeEeccCCcccc----CCChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCcccccc----
Q 037624 6 IGSLRNLVSLYLSGNNLTG----SIPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKGT---- 72 (408)
Q Consensus 6 ~~~l~~l~~L~l~~N~l~g----~~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g~---- 72 (408)
+...++|+.|+|++|.++. .+...+...+.| .|+|++|.++.. +=..+...++|++|+|++|.+...
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~ 119 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 119 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHH
Confidence 5567889999999999873 233455667889 999999999843 223466778999999999976521
Q ss_pred ---CCCcccccc-cceeEeeccc
Q 037624 73 ---IPYPLGVLP-LSYLDLSFND 91 (408)
Q Consensus 73 ---~p~~~~~~~-l~~l~l~~n~ 91 (408)
+...+..-+ |+.|+++.+.
T Consensus 120 ~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 120 EMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHhCCCccEeeCcCCC
Confidence 223333345 7778776654
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.39 E-value=0.0011 Score=52.62 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=58.2
Q ss_pred cCCccCCeEeccC-CccccC----CChhhcccccc-EEEccccccccc----cCccccCCCCCCEEEccCcccccc----
Q 037624 7 GSLRNLVSLYLSG-NNLTGS----IPSSLGRLTSC-TLTLSNNKLSGS----IPSEIGNLQELSHLDSRHIFIKGT---- 72 (408)
Q Consensus 7 ~~l~~l~~L~l~~-N~l~g~----~p~~~~~l~~L-~L~ls~N~l~g~----iP~~~~~l~~L~~l~l~~N~~~g~---- 72 (408)
.+.++|+.|+|++ |.++.. +-..+...++| .|+|++|.++.. +-..+...++|+.|++++|.++..
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 4678999999997 556522 33345567888 899999998743 222345678999999999988643
Q ss_pred CCCcccccc-cceeEe--eccccc
Q 037624 73 IPYPLGVLP-LSYLDL--SFNDLS 93 (408)
Q Consensus 73 ~p~~~~~~~-l~~l~l--~~n~l~ 93 (408)
+-..+...+ |+.+++ +.|.+.
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~ 117 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLG 117 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHhCccccEEeeccCCCcCc
Confidence 223455556 776555 455553
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.66 E-value=0.0039 Score=49.32 Aligned_cols=16 Identities=0% Similarity=-0.209 Sum_probs=8.3
Q ss_pred CCCCCCEEEccCcccc
Q 037624 55 NLQELSHLDSRHIFIK 70 (408)
Q Consensus 55 ~l~~L~~l~l~~N~~~ 70 (408)
..+.|+.|+|++|.++
T Consensus 44 ~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSN 59 (166)
T ss_dssp TCCSCCEEECTTSCCC
T ss_pred cCCccCeeeccCCccc
Confidence 4455555555555543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=90.80 E-value=0.51 Score=39.09 Aligned_cols=87 Identities=14% Similarity=0.090 Sum_probs=52.1
Q ss_pred HHHHHHhhcccceeecccceeEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc---ccCCcceeeeEeEeee
Q 037624 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY---PKYDIETLLSFMDFVC 242 (408)
Q Consensus 166 ~l~~at~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~---~~~n~~~l~~~~~~~~ 242 (408)
++.+--+.|...+..+-++.+.||+.... ++.+.+|+....... ....+.+|...+. .+.-.++++.+ .
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~----~ 79 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHF----E 79 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEE----E
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEE----E
Confidence 55555566665554444445789998764 445678877543222 2335677777753 44445677766 5
Q ss_pred cCCccchhhhhhcccchhh
Q 037624 243 IKDACFWFMNTWRGEACSV 261 (408)
Q Consensus 243 ~~~~~~~lv~e~~~~~g~l 261 (408)
..++..++++++. ++..+
T Consensus 80 ~~~~~~~lv~~~l-~G~~~ 97 (263)
T d1j7la_ 80 RHDGWSNLLMSEA-DGVLC 97 (263)
T ss_dssp EETTEEEEEEECC-SSEEH
T ss_pred ecCCceEEEEEec-ccccc
Confidence 5556667777777 55444
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=87.30 E-value=0.4 Score=39.58 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=45.8
Q ss_pred eecccce-eEEEEEEeCCCcEEEEEecccccCCCcchhhHHHHHHHHhc----ccCCcceeeeEeEeeecCCccchhhhh
Q 037624 179 CFGTGGY-GSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILY----PKYDIETLLSFMDFVCIKDACFWFMNT 253 (408)
Q Consensus 179 ~iG~G~~-G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~l~----~~~n~~~l~~~~~~~~~~~~~~~lv~e 253 (408)
.+..|.. +.||+....++..+.+|.-.... ...+..|.+.+. .....++++.+ +..++..+++++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~----~~~~~~~~~v~~ 86 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDV----VTEAGRDWLLLG 86 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEE----EECSSCEEEEEE
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeee----cccccceEEEEE
Confidence 3445543 67999999888888888764321 234666776664 33335666665 556667778888
Q ss_pred hcccchhh
Q 037624 254 WRGEACSV 261 (408)
Q Consensus 254 ~~~~~g~l 261 (408)
++ ++.++
T Consensus 87 ~i-~G~~~ 93 (255)
T d1nd4a_ 87 EV-PGQDL 93 (255)
T ss_dssp CC-SSEET
T ss_pred ee-ecccc
Confidence 87 55443
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