Citrus Sinensis ID: 037660

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
MGSQTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGSITSFCGI
ccccccccccEEEccccccccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHcccccccccEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccEEEEEEccccccccccccccccccccccEEEEccccccEEEEEccccEEEEccccccEEEEHHHHHHHHHcccccccccEEEEcccccEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHcccccccccccccccc
ccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHccccccEEEEEEccccccEEcHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccEEEEEcccccccccccccccccccccEEEEEEccccccEEEEEEcccEEEccccccEEEEEEccHEEEEccccEccEEEEEEEEccccEEEEEEEccccccccccHHHcccccccccccccHHHHHHHHHHHcccccccHHHHHccc
MGSQTQPKILVVDLCnenlkpgtstWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELfdlpietkmqntsdkpyheyfgqytgiplyeslaiddptnltatqsftdrmwpngnppfcesVHSFAKIIVEVDQLVMRMIMESYGIekyydshieTSNYLLRFFkyrkpeinehnvglyphtdknmvSIIHQNHinglqikakdgewidlepspssfVIMAADGLlawsngrirsceHQVIINAHETRysmglfsfnrgivhipeefvdelhplryrpfdiyeflrfhdsdegkktdgsitsfcgi
mgsqtqpkILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRfhdsdegkktdgsitsfcgi
MGSQTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGSITSFCGI
********ILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFH******************
*****QPKILVVDLCNENL****STWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKM*********EYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGSITSFCGI
MGSQTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGSITSFCGI
******PKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGSITS*CG*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGSQTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGSITSFCGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query312 2.2.26 [Sep-21-2011]
Q39110377 Gibberellin 20 oxidase 1 no no 0.900 0.745 0.255 2e-22
Q39111378 Gibberellin 20 oxidase 2 no no 0.826 0.682 0.247 1e-20
O04395291 Flavonol synthase/flavano N/A no 0.823 0.883 0.246 3e-19
Q40061338 Mugineic-acid 3-dioxygena N/A no 0.846 0.781 0.270 6e-19
Q9XFR9341 Gibberellin 2-beta-dioxyg no no 0.727 0.665 0.298 2e-18
P93771372 Gibberellin 20 oxidase 1 no no 0.849 0.712 0.25 2e-18
O04706365 Gibberellin 20 oxidase 1- N/A no 0.830 0.709 0.242 5e-18
Q39112380 Gibberellin 20 oxidase 3 no no 0.666 0.547 0.255 6e-18
O04707365 Gibberellin 20 oxidase 1- N/A no 0.830 0.709 0.242 8e-18
O04705361 Gibberellin 20 oxidase 1- N/A no 0.830 0.717 0.242 2e-17
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function desciption
 Score =  106 bits (265), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 144/298 (48%), Gaps = 17/298 (5%)

Query: 9   ILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDL 68
           + ++DL  +NL    S+ +     I +A +  G F  + + I  EL ++  +     FD+
Sbjct: 61  VPLIDL--QNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDM 118

Query: 69  PIETKMQ-----NTSDKPYHEYFGQY-TGIPLYESLAI---DDPTNLTATQSFTDRMWPN 119
           P+  K +       S      + G++ T +P  E+L+    DD +   + Q +      +
Sbjct: 119 PLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGH 178

Query: 120 GNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEK-YYDSHIETSNYLLRFFKYRKPEIN 178
           G  PF +    + + +  +   +M ++  S G+++ Y+    E ++ ++R   Y  P I 
Sbjct: 179 GFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRL-NYYPPCIK 237

Query: 179 -EHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNG 237
            +  +G  PH D   ++I+HQ+H+NGLQ+  ++ +W  + P+P +FV+   D  +A SN 
Sbjct: 238 PDLTLGTGPHCDPTSLTILHQDHVNGLQVFVEN-QWRSIRPNPKAFVVNIGDTFMALSND 296

Query: 238 RIRSCEHQVIINAHETRYSMGLFSFNRG--IVHIPEEFVDELHPLRYRPFDIYEFLRF 293
           R +SC H+ ++N+   R S+  F   +   +V  P E +D +   RY  F    FL F
Sbjct: 297 RYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRYPDFTWSMFLEF 354
Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12, and GA25 is also formed as a minor product.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1 Back     alignment and function description
>sp|O04395|FLS_MATIN Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1 Back     alignment and function description
>sp|Q40061|IDS2_HORVU Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1 Back     alignment and function description
>sp|Q9XFR9|G2OX2_ARATH Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1 Back     alignment and function description
>sp|P93771|GAOX1_ORYSJ Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function description
>sp|Q39112|GAOX3_ARATH Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
297743339 461 unnamed protein product [Vitis vinifera] 1.0 0.676 0.514 1e-100
225442753313 PREDICTED: gibberellin 20 oxidase 3-like 1.0 0.996 0.514 1e-100
147800974317 hypothetical protein VITISV_030994 [Viti 1.0 0.984 0.512 1e-98
225442757317 PREDICTED: gibberellin 3-beta-dioxygenas 1.0 0.984 0.509 4e-98
224054172313 2-oxoglutarate-dependent dioxygenase [Po 1.0 0.996 0.514 7e-98
255553011313 Gibberellin 20 oxidase, putative [Ricinu 1.0 0.996 0.539 2e-97
147852210311 hypothetical protein VITISV_028513 [Viti 0.996 1.0 0.506 4e-97
225442749311 PREDICTED: gibberellin 20 oxidase 1 [Vit 0.996 1.0 0.503 1e-96
356528946319 PREDICTED: gibberellin 20 oxidase 2-like 1.0 0.978 0.504 2e-96
224054180313 2-oxoglutarate-dependent dioxygenase [Po 1.0 0.996 0.482 9e-96
>gi|297743339|emb|CBI36206.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 161/313 (51%), Positives = 232/313 (74%), Gaps = 1/313 (0%)

Query: 1   MGSQTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFK 60
           MGS+T PK+ ++D   ENLKPG+ +W S C+++R A+E+ GCF A YN++PLELHN+IF 
Sbjct: 149 MGSETHPKLPIIDFSEENLKPGSDSWFSVCHDVRHALEEYGCFMAYYNQVPLELHNKIFN 208

Query: 61  AADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNG 120
           A  ELFDLP E K++NTSDKP H Y GQ    PL+ES+ ID  TNL   QSF   MWP G
Sbjct: 209 ALGELFDLPTEIKVKNTSDKPSHGYIGQIPAYPLHESMGIDHATNLEEIQSFAKLMWPAG 268

Query: 121 NPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEH 180
           N  FCE VHS+  ++ E++Q+VMRM+++SYGIEKY+DSHI ++ YLLR  K R P++NE+
Sbjct: 269 NEHFCEVVHSYTSLLAELEQVVMRMVLQSYGIEKYFDSHIASTRYLLRCLKNRVPKMNEN 328

Query: 181 NVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDL-EPSPSSFVIMAADGLLAWSNGRI 239
           ++    H+DK+ ++I+ QNH++GL++  KDG+ I    PSPS F+++A D  +AWSNGRI
Sbjct: 329 DIAFPTHSDKSFMTILQQNHVSGLEVDTKDGKSIGFGPPSPSVFIVIAGDAFMAWSNGRI 388

Query: 240 RSCEHQVIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEG 299
              +H+VI+ A+E RYS+ LF+F  G++ +PEE VD+ HPL+++PFD   F+RF  ++EG
Sbjct: 389 HPPKHRVIMRANEERYSLALFAFKNGMIKVPEELVDDKHPLQFKPFDHVGFIRFFHTEEG 448

Query: 300 KKTDGSITSFCGI 312
           +K++ +I ++CGI
Sbjct: 449 RKSNSAIKAYCGI 461

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225442753|ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147800974|emb|CAN77851.1| hypothetical protein VITISV_030994 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442757|ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera] gi|297743341|emb|CBI36208.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054172|ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255553011|ref|XP_002517548.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543180|gb|EEF44712.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147852210|emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442749|ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera] gi|297743336|emb|CBI36203.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356528946|ref|XP_003533058.1| PREDICTED: gibberellin 20 oxidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|224054180|ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845389|gb|EEE82936.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
TAIR|locus:2011581314 AT1G52800 [Arabidopsis thalian 0.974 0.968 0.488 9.1e-84
TAIR|locus:2011506317 AT1G52820 [Arabidopsis thalian 1.0 0.984 0.457 4.7e-80
TAIR|locus:2011576310 AT1G52790 [Arabidopsis thalian 0.977 0.983 0.465 4.8e-78
TAIR|locus:2034255320 AT1G80320 [Arabidopsis thalian 1.0 0.975 0.408 4.9e-69
TAIR|locus:2196618320 AT1G15540 [Arabidopsis thalian 1.0 0.975 0.420 6.5e-67
TAIR|locus:2139389322 AOP1 [Arabidopsis thaliana (ta 0.945 0.916 0.422 1.3e-66
TAIR|locus:2010474322 AT1G28030 [Arabidopsis thalian 0.990 0.959 0.350 2.1e-54
TAIR|locus:2011586289 AT1G52810 [Arabidopsis thalian 0.5 0.539 0.420 7.7e-50
TAIR|locus:2139370361 AOP3 [Arabidopsis thaliana (ta 0.439 0.379 0.390 5.3e-49
TAIR|locus:2121671324 AT4G23340 [Arabidopsis thalian 0.900 0.867 0.280 7.1e-29
TAIR|locus:2011581 AT1G52800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 150/307 (48%), Positives = 214/307 (69%)

Query:     8 KILVVDLCNEN-LKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELF 66
             K+ ++DL ++  LKP TSTW S   E  +A+E+ GCF A+Y+ +  +L + IF AA+ELF
Sbjct:     9 KVPILDLTSQQELKPNTSTWRSVSREACEALEEYGCFLAVYDGVTQQLDDSIFAAAEELF 68

Query:    67 DLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCE 126
             DLP ETK +N ++KPYH Y GQ   IPL+E L +D  TN    Q FT  MWP GN  FC 
Sbjct:    69 DLPTETKKKNVNEKPYHGYVGQMPVIPLHEGLGVDYVTNKEIAQRFTHLMWPQGNDRFCN 128

Query:   127 SVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYRKPEINEHNVGLYP 186
             +VH+F+  + E+D+LV+RMI E+YG+EK+Y+SH+ +  YLL+F KY  P     ++  +P
Sbjct:   129 TVHTFSNAVAELDRLVVRMIFENYGVEKHYESHVGSKTYLLKFLKYLAPP-ESISMPAFP 187

Query:   187 -HTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQ 245
              HTDK  +SI+HQN +NGL++K+KDGEWI L+  P S+V+MA D  + WSN RIRSCEH+
Sbjct:   188 QHTDKTFLSILHQNDVNGLEVKSKDGEWISLQLPPKSYVVMAGDISMGWSNDRIRSCEHR 247

Query:   246 VIINAHETRYSMGLFSFNRGIVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDEGKKTDGS 305
             V +   +TRY++GLFSF   +V IPEE VD+ HPL Y+PFD    + F+ + EG++ + +
Sbjct:   248 VTMEGDKTRYTLGLFSFLTDLVSIPEELVDDKHPLMYKPFDNIALINFYTTKEGREANST 307

Query:   306 ITSFCGI 312
             + ++CGI
Sbjct:   308 LKAYCGI 314
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2011506 AT1G52820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011576 AT1G52790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034255 AT1G80320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196618 AT1G15540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139389 AOP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010474 AT1G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011586 AT1G52810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139370 AOP3 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121671 AT4G23340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.7LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034487001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (330 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00007229001
SubName- Full=Chromosome undetermined scaffold_186, whole genome shotgun sequence; (178 aa)
  •     0.487
GSVIVG00003360001
SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (170 aa)
  •     0.487
GSVIVG00015847001
SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (257 aa)
  •     0.468
GSVIVG00013474001
SubName- Full=Chromosome undetermined scaffold_485, whole genome shotgun sequence; Flags- Fragm [...] (222 aa)
  •     0.452
GSVIVG00008183001
SubName- Full=Chromosome undetermined scaffold_1274, whole genome shotgun sequence; (163 aa)
  •     0.402
GSVIVG00004995001
SubName- Full=Chromosome undetermined scaffold_884, whole genome shotgun sequence; (92 aa)
  •     0.400

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 6e-31
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-31
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-26
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-26
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-24
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-22
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-22
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-21
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-20
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-18
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-18
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-18
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-17
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-17
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 5e-16
PLN02216357 PLN02216, PLN02216, protein SRG1 8e-16
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-15
PLN02997325 PLN02997, PLN02997, flavonol synthase 6e-15
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-12
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-12
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-12
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-12
PLN02704335 PLN02704, PLN02704, flavonol synthase 9e-12
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-10
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-09
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-08
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-05
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information 
 Score =  117 bits (295), Expect = 6e-31
 Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 23/271 (8%)

Query: 33  IRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDKPYHEYFGQYTGI 92
           +R+A E  GCF  + + + L L  E+ K    LFDLP E K +NT       Y       
Sbjct: 21  LREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPSEVN 80

Query: 93  PLYESLAIDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGI 152
           PLYE+L + D  +  A  +F  ++  + +P   E++  +AK I ++   + R + ES G+
Sbjct: 81  PLYEALGLYDMASPQAVDTFCSQL--DASPHQRETIKKYAKAIHDLAMDLARKLAESLGL 138

Query: 153 E-----KYYDSHIETSNYLLRFFKYR-KPEINEHNVGLYPHTDKNMVSIIHQNH-INGLQ 205
                 + + S         R  KY   PE    + G+  HTD   ++I+  +  + GL+
Sbjct: 139 VEGDFFQGWPSQ-------FRINKYNFTPE-TVGSSGVQIHTDSGFLTILQDDENVGGLE 190

Query: 206 IKAKD-GEWIDLEPSPSSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLF---S 261
           +     GE++ ++P P + ++   D   AWSNGR+ + +H+V       R S+  F    
Sbjct: 191 VMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFLLGP 250

Query: 262 FNRGIVHIPEEFVDELHPLRYRPFDIYEFLR 292
            +   V  P EFVD  HP  Y+PF  YE  R
Sbjct: 251 KDDD-VEAPPEFVDAEHPRLYKPFT-YEDYR 279

Length = 300
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 312
PLN02276361 gibberellin 20-oxidase 100.0
PLN02216357 protein SRG1 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02947374 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02704335 flavonol synthase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.81
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.96
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.89
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.27
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.66
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 87.29
TIGR02466201 conserved hypothetical protein. This family consis 86.85
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 81.42
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information 
Probab=100.00  E-value=5e-77  Score=556.53  Aligned_cols=301  Identities=22%  Similarity=0.410  Sum_probs=262.7

Q ss_pred             CCccEEECCCCCCCCCchhHHHHHHHHHHHhhcccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCCc
Q 037660            7 PKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSD-KPYHEY   85 (312)
Q Consensus         7 ~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy   85 (312)
                      .+||+|||+.+ +.+++.+|.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||
T Consensus        39 ~~iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY  117 (361)
T PLN02276         39 LAVPLIDLGGF-LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY  117 (361)
T ss_pred             CCCCeEEChhh-cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence            57999999985 3333345778999999999999999999999999999999999999999999999998654 367899


Q ss_pred             cCCcC-----CCCceeeeccCCCCCcc---ccccccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhh
Q 037660           86 FGQYT-----GIPLYESLAIDDPTNLT---ATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIE-KYY  156 (312)
Q Consensus        86 ~~~~~-----~~d~~E~~~~~~~~~~~---~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~-~~~  156 (312)
                      .+...     ..|++|.|.++......   ....+.+|.||+..++||+++++|+..|.+++..||++||++||++ ++|
T Consensus       118 ~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f  197 (361)
T PLN02276        118 ASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGYY  197 (361)
T ss_pred             CccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            77543     24799999886432111   1123445789987789999999999999999999999999999999 899


Q ss_pred             hhhhcCcccceeEeeecCCCCCCCccccccccCCCceeEEeeCCCCceeEEccCCCeEECCCCCCeEEEEechhhHHHhc
Q 037660          157 DSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSN  236 (312)
Q Consensus       157 ~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~Tn  236 (312)
                      ++++..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+||+|||
T Consensus       198 ~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalVVNiGD~L~~~TN  276 (361)
T PLN02276        198 RKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VDNKWRSVRPRPGALVVNIGDTFMALSN  276 (361)
T ss_pred             HHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE-ECCEEEEcCCCCCeEEEEcHHHHHHHhC
Confidence            888888889999999999988888899999999999999999999999997 7999999999999999999999999999


Q ss_pred             CCCCCCCCeeecCCCCceeEEEecccCCc--eeeCCccccCCCCCCCCCCccHHHHHHHhhccc--cCCCccchhhc
Q 037660          237 GRIRSCEHQVIINAHETRYSMGLFSFNRG--IVHIPEEFVDELHPLRYRPFDIYEFLRFHDSDE--GKKTDGSITSF  309 (312)
Q Consensus       237 G~~ks~~HRVv~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~~~--~~~~~~~~~~~  309 (312)
                      |+|||++|||+.++.++|||++||++|+.  +|.|+++++++++|++|++++++||++.+.+..  +.+..+.++.|
T Consensus       277 G~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~  353 (361)
T PLN02276        277 GRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNTLQAFSNW  353 (361)
T ss_pred             CccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhHHHHHHHH
Confidence            99999999999988899999999999998  999999999999999999999999999877643  44444444443

>PLN02216 protein SRG1 Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-12
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-12
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-12
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-10
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 3e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-06
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 7   PKILVVDLCNENLKPGTSTWISTC-NEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADEL 65
           P++  +DL  +N++         C  E+++A  D G    I + IP +L   + KA +E 
Sbjct: 45  PQVPTIDL--KNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEF 102
Query: 66  FDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAI---DDPTNLTATQSFTD-RMWPNGN 121
           F L +E K +  +D+   +  G  + +    S  +   D   +L   +   D  +WP   
Sbjct: 103 FSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 162
Query: 122 PPFCESVHSFAKIIVEVDQLVMRMIMESYGIE-KYYDSHIETSNYLLRFFK---YRKPEI 177
             + E+   +AK +  +   V + +    G+E    +  +     LL   K   Y K   
Sbjct: 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQ 222
Query: 178 NEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAWSNG 237
            E  +G+  HTD + ++ I  N + GLQ+   +G+W+  +  P S V+   D L   SNG
Sbjct: 223 PELALGVEAHTDVSALTFILHNMVPGLQL-FYEGKWVTAKCVPDSIVMHIGDTLEILSNG 281
Query: 238 RIRSCEHQVIINAHETRYSMGLF 260
           + +S  H+ ++N  + R S  +F
Sbjct: 282 KYKSILHRGLVNKEKVRISWAVF 304
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 2e-43
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-39
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-36
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-36
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 5e-35
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-33
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  151 bits (383), Expect = 2e-43
 Identities = 64/315 (20%), Positives = 124/315 (39%), Gaps = 41/315 (13%)

Query: 3   SQTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAA 62
            +  P++  +DL N           +   E+++A  D G    I + IP +L   + KA 
Sbjct: 41  KEDGPQVPTIDLKNIE-SDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAG 99

Query: 63  DELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAID---------DPTNLTATQSFT 113
           +E F L +E K +  +D+   +  G  + +    S  ++          P          
Sbjct: 100 EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEE-----KRD 154

Query: 114 DRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYDSHIETSNYLLRFFKYR 173
             +WP     + E+   +AK +  +   V + +    G+E          + L +     
Sbjct: 155 LSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEP---------DRLEKEVGGL 205

Query: 174 KPE-----IN--------EHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSP 220
           +       IN        E  +G+  HTD + ++ I  N + GLQ+   +G+W+  +  P
Sbjct: 206 EELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVP 264

Query: 221 SSFVIMAADGLLAWSNGRIRSCEHQVIINAHETRYSMGLF---SFNRGIVHIPEEFVDEL 277
            S V+   D L   SNG+ +S  H+ ++N  + R S  +F     ++ ++    E V   
Sbjct: 265 DSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVE 324

Query: 278 HPLRYRPFDIYEFLR 292
            P ++ P    + + 
Sbjct: 325 SPAKFPPRTFAQHIE 339
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.3
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.3
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 89.41
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 87.95
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.91
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 81.78
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=1.5e-79  Score=563.93  Aligned_cols=291  Identities=20%  Similarity=0.284  Sum_probs=258.6

Q ss_pred             CCCccEEECCCCCCCCCchhHHHHHHHHHHHhhcccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 037660            6 QPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSD-KPYHE   84 (312)
Q Consensus         6 ~~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G   84 (312)
                      +.+||||||+.+  .   .++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++|
T Consensus         4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~G   78 (312)
T 3oox_A            4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARG   78 (312)
T ss_dssp             CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSE
T ss_pred             CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccc
Confidence            568999999984  1   25678999999999999999999999999999999999999999999999999864 46789


Q ss_pred             ccCCcC-------CCCceeeeccCCCCC--ccccccccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-h
Q 037660           85 YFGQYT-------GIPLYESLAIDDPTN--LTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIE-K  154 (312)
Q Consensus        85 y~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~-~  154 (312)
                      |.+.+.       ..|++|.|.++....  ......+.+|.||+.+++||+++++|+++|.+++.+||++|+++||++ +
T Consensus        79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~  158 (312)
T 3oox_A           79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD  158 (312)
T ss_dssp             EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred             cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence            976543       258999999875322  112233557899999999999999999999999999999999999999 8


Q ss_pred             hhhhhhcCcccceeEeeecCCCCCCCccccccccCCCceeEEeeCCCCceeEEccCCCeEECCCCCCeEEEEechhhHHH
Q 037660          155 YYDSHIETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLAW  234 (312)
Q Consensus       155 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~  234 (312)
                      +|.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++||||||+||+|
T Consensus       159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~  238 (312)
T 3oox_A          159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL  238 (312)
T ss_dssp             TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred             HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence            99988888889999999999987555599999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCeeecCC----CCceeEEEecccCCc--eeeCCccccCCCCCCCCC-CccHHHHHHHhhccccCC
Q 037660          235 SNGRIRSCEHQVIINA----HETRYSMGLFSFNRG--IVHIPEEFVDELHPLRYR-PFDIYEFLRFHDSDEGKK  301 (312)
Q Consensus       235 TnG~~ks~~HRVv~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~~~~e~~~~~~~~~~~~  301 (312)
                      |||+|||++|||+.++    ..+|||++||++|+.  +|.|+++|+++++|++|+ ++|++||++.|++++|++
T Consensus       239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~~l~  312 (312)
T 3oox_A          239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIKLA  312 (312)
T ss_dssp             TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHHC--
T ss_pred             hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHhccC
Confidence            9999999999998764    467999999999998  999999999999999999 999999999999987763
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 312
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-39
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 9e-35
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-26
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-18
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  140 bits (353), Expect = 1e-39
 Identities = 62/302 (20%), Positives = 126/302 (41%), Gaps = 15/302 (4%)

Query: 3   SQTQPKILVVDLCNENLKPGTSTWISTC-NEIRQAMEDTGCFEAIYNKIPLELHNEIFKA 61
            +  P++  +DL  +N++         C  E+++A  D G    I + IP +L   + KA
Sbjct: 40  KEDGPQVPTIDL--KNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKA 97

Query: 62  ADELFDLPIETKMQNTSDKPYHEYFGQYTGIPLYESLAIDDPTNLTATQSFTDRMWPNG- 120
            +E F L +E K +  +D+   +  G  + +    S  ++            ++   +  
Sbjct: 98  GEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIW 157

Query: 121 ---NPPFCESVHSFAKIIVEVDQLVMRMIMESYGIEKYYD----SHIETSNYLLRFFKYR 173
                 + E+   +AK +  +   V + +    G+E          +E     ++   Y 
Sbjct: 158 PKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYP 217

Query: 174 KPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADGLLA 233
           K    E  +G+  HTD + ++ I  N + GLQ+   +G+W+  +  P S V+   D L  
Sbjct: 218 KCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEI 276

Query: 234 WSNGRIRSCEHQVIINAHETRYSMGLF---SFNRGIVHIPEEFVDELHPLRYRPFDIYEF 290
            SNG+ +S  H+ ++N  + R S  +F     ++ ++    E V    P ++ P    + 
Sbjct: 277 LSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 336

Query: 291 LR 292
           + 
Sbjct: 337 IE 338
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 91.63
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.7e-73  Score=525.64  Aligned_cols=286  Identities=22%  Similarity=0.358  Sum_probs=244.0

Q ss_pred             CCCCCccEEECCCCCCCCCchhHHHHHHHHHHHhhcccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC---
Q 037660            4 QTQPKILVVDLCNENLKPGTSTWISTCNEIRQAMEDTGCFEAIYNKIPLELHNEIFKAADELFDLPIETKMQNTSDK---   80 (312)
Q Consensus         4 ~~~~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---   80 (312)
                      .+..+||||||+.+ ..++...|++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....   
T Consensus        41 ~~~~~IPvIDls~l-~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~  119 (349)
T d1gp6a_          41 EDGPQVPTIDLKNI-ESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATG  119 (349)
T ss_dssp             CCSCCCCEEECTTT-TCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGT
T ss_pred             CCCCCcCeEEChhc-CCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccC
Confidence            35678999999995 33333458889999999999999999999999999999999999999999999999997653   


Q ss_pred             CCCCccCCcC-----CCCceeeec-cCCCCCccccccccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-
Q 037660           81 PYHEYFGQYT-----GIPLYESLA-IDDPTNLTATQSFTDRMWPNGNPPFCESVHSFAKIIVEVDQLVMRMIMESYGIE-  153 (312)
Q Consensus        81 ~~~Gy~~~~~-----~~d~~E~~~-~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~-  153 (312)
                      .+.||.....     ..++.+.+. ....     ......|.||+..+.|++.+++|+++|.+++.+|+++++++||++ 
T Consensus       120 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~  194 (349)
T d1gp6a_         120 KIQGYGSKLANNASGQLEWEDYFFHLAYP-----EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEP  194 (349)
T ss_dssp             BCSEEECCCCCSTTCCCCSCEEEEEEEES-----GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred             Cccccccccccccccccchhhhhcccccc-----cccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCH
Confidence            2233322211     112222211 1111     112345789999999999999999999999999999999999999 


Q ss_pred             hhhhhhh---cCcccceeEeeecCCCCCCCccccccccCCCceeEEeeCCCCceeEEccCCCeEECCCCCCeEEEEechh
Q 037660          154 KYYDSHI---ETSNYLLRFFKYRKPEINEHNVGLYPHTDKNMVSIIHQNHINGLQIKAKDGEWIDLEPSPSSFVIMAADG  230 (312)
Q Consensus       154 ~~~~~~~---~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~  230 (312)
                      ++|.+.+   ..+.+.+|++|||+++.+...+|+++|||+|+||||+||.++||||+ ++|+|++|+|.+|++|||+||+
T Consensus       195 ~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvGD~  273 (349)
T d1gp6a_         195 DRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDT  273 (349)
T ss_dssp             THHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHH
T ss_pred             HHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCcceeee-cCCceEEccCCCCCeeeeHHhH
Confidence            8887665   34567899999999998888899999999999999999999999995 7899999999999999999999


Q ss_pred             hHHHhcCCCCCCCCeeecCCCCceeEEEecccCCc--e-eeCCccccCCCCCCCCCCccHHHHHHHhhc
Q 037660          231 LLAWSNGRIRSCEHQVIINAHETRYSMGLFSFNRG--I-VHIPEEFVDELHPLRYRPFDIYEFLRFHDS  296 (312)
Q Consensus       231 l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~--~-i~p~~~~~~~~~p~~y~~~~~~e~~~~~~~  296 (312)
                      ||+||||+||||+|||+.+++++||||+||++|+.  + +.|+++|+++++|++|+|||++||++.|+.
T Consensus       274 l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         274 LEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             HHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             HHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence            99999999999999999998899999999999988  4 489999999999999999999999999884
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure