Citrus Sinensis ID: 037680

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MMNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCVKV
Secondary Structure (PSIPRED)
cccEEEEEEEEccccccEEcccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEccccccEEEccccccccccccccEEHHHHcccccccccHHHHHHHHcccccEEc
Secondary Structure Prediction (SSPRO)
cccccEEEEEcccccccccEEccHHHHHcccHHHHHHHHHHHHHHHHHHcHHHcccEEEEEEEccccccccccccccccccccHHHHHHHcccHHEEEcHHHHHHHHHHccccEc
Coil and Loop (DISEMBL)
MMNMAYAISlecpagmglsysntksdynpnadkstaqdsytfpiswlerlpqyktsffntlGVTHLYFrrgnawvddatgatdlfehrwttglmhafnsdqthkglftncdcvkv
Flexible Loop (DISEMBL)
MMNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHafnsdqthkglftncdcvkv
Low Complexity Region (SEG)
MMNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCVKV
Disordered region (IsUnstruct)
*******ISLEC**************************SYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCV**
Disordered Region (DISOPRED)
*MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCVKV
Disordered Region (DISEMBL)
MMNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCVKV
Disordered Region (DISPRO)
*MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCVKV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHLYFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCVKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
P52711	516	Serine carboxypeptidase I	N/A	no	0.852	0.189	0.362	2e-13
Q9ZQQ0	452	Serine carboxypeptidase-l	yes	no	0.913	0.232	0.358	4e-13
P55748	436	Serine carboxypeptidase I	N/A	no	0.913	0.240	0.348	4e-12
Q9SFB5	459	Serine carboxypeptidase-l	no	no	0.930	0.233	0.357	5e-12
Q0WRX3	502	Serine carboxypeptidase-l	no	no	0.843	0.193	0.345	7e-12
Q949Q7	479	Serine carboxypeptidase-l	no	no	0.843	0.202	0.330	5e-11
Q0WPR4	499	Serine carboxypeptidase-l	no	no	0.852	0.196	0.317	1e-10
Q9M099	465	Serine carboxypeptidase 2	no	no	0.852	0.210	0.320	2e-09
P08818	476	Serine carboxypeptidase 2	N/A	no	0.904	0.218	0.323	3e-09
Q1PF08	464	Serine carboxypeptidase-l	no	no	0.852	0.211	0.304	4e-09

>sp|P52711|CBP23_HORVU Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 26/124 (20%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------- 62
           LE PAG+G SYSNT +DY  + D  TA+D+Y F  +WLER P+YK   F   G       
Sbjct: 182 LESPAGVGYSYSNTTADYGRSGDNGTAEDAYQFLDNWLERFPEYKGREFYITGESYAGHY 241

Query: 63  ---VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLF 107
              + H   R             GNA ++D T +  +++  WT    HA  SD+T  G+ 
Sbjct: 242 VPQLAHAILRHASPDINLKGIMIGNAVINDWTDSKGMYDFFWT----HALISDETADGIS 297

Query: 108 TNCD 111
            NC+
Sbjct: 298 KNCN 301

Hordeum vulgare (taxid: 4513)
EC: 3EC: .EC: 4EC: .EC: 1EC: 6EC: .EC: 6

>sp|Q9ZQQ0|SCP26_ARATH Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 26/131 (19%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + LE PAG+G SYSNT SD     D+ TA+D+Y F + W ER PQYK   F   G
Sbjct: 119 KLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAG 178

Query: 63  VTH-----------LYFRR-----------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
            ++           +Y +R           GNA +DD      LFE+ W  GL+    SD
Sbjct: 179 ESYAGHYVPQLSQIVYEKRNPAINFKGFIVGNAVIDDYHDYVGLFEYWWAHGLI----SD 234

Query: 101 QTHKGLFTNCD 111
            T+  L   C+
Sbjct: 235 LTYHNLRITCE 245

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|P55748|CBP22_HORVU Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 62/135 (45%), Gaps = 30/135 (22%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ P G+G SYSNT +D   N D+ TA+DS  F   WLER PQYK   F   G
Sbjct: 88  QVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTG 147

Query: 63  VTHL--------------------------YFRRGNAWVDDATGATDLFEHRWTTGLMHA 96
            ++                            +  GNA  DD      +F++ WTTGL+  
Sbjct: 148 ESYAGHYVPQLAQAIKRHHEATGDKSINLKGYMVGNALTDDFHDHYGIFQYMWTTGLI-- 205

Query: 97  FNSDQTHKGLFTNCD 111
             SDQT+K L   CD
Sbjct: 206 --SDQTYKLLNIFCD 218

Hordeum vulgare (taxid: 4513)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

>sp|Q9SFB5|SCP27_ARATH Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 62/137 (45%), Gaps = 30/137 (21%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + LE PAG+G SYSNT SD     D+ TA+DSY F ++W ER PQYK   F  +G
Sbjct: 123 KLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVG 182

Query: 63  ----------VTHLYFRR----------------GNAWVDDATGATDLFEHRWTTGLMHA 96
                     ++ L   R                GNA  DD       FE+ W  GL+  
Sbjct: 183 ESYAGHFVPQLSKLVHERNKGFKNPAINLKGFMVGNAVTDDYHDYIGTFEYWWNHGLI-- 240

Query: 97  FNSDQTHKGLFTNCDCV 113
             SD T+  L T C  V
Sbjct: 241 --SDSTYHQLKTACYSV 255

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q0WRX3|SCP40_ARATH Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2

 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 42/139 (30%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYK-------- 54
           N A  + LE PAG+G SY+NT SD   + D++TA D+Y F ++WLER P+YK        
Sbjct: 168 NAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAG 227

Query: 55  -------------------TSFFNTLGVTHLYFRRGNAWVDDAT---GATDLFEHRWTTG 92
                               SFFN  G+       GNA ++D T   G  D FE      
Sbjct: 228 ESYAGHYVPQLAHTILLHHRSFFNLKGIL-----IGNAVINDETDLMGMYDFFES----- 277

Query: 93  LMHAFNSDQTHKGLFTNCD 111
             HA  S+ +   L +NCD
Sbjct: 278 --HALISEDSLARLKSNCD 294

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q949Q7|SCP29_ARATH Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 30/127 (23%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHL--- 66
           L+ P G+G SYSNT SD   N DK TA+DS  F + W+ER P+YK   F  +G ++    
Sbjct: 132 LDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHY 191

Query: 67  -----------------------YFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTH 103
                                   +  GN  +DD      LF++ W+ G    F SDQT+
Sbjct: 192 IPQLSEAIVKHNQGSDKNSINLKGYMVGNGLMDDFHDRLGLFQYIWSLG----FISDQTY 247

Query: 104 KGLFTNC 110
             L   C
Sbjct: 248 SLLQLQC 254

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q0WPR4|SCP34_ARATH Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 31/129 (24%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------- 62
           LE P G+G SY+NT  D     D  TA+DSY F ++W +R PQYK+  F   G       
Sbjct: 146 LESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHY 205

Query: 63  ---VTHLYFRR-----------------GNAWVDDATGATDLFEHRWTTGLMHAFNSDQT 102
              ++ L ++                  GNA +DD T    + E+ W     HA  SD  
Sbjct: 206 VPQLSELIYKENKIASKKDFINLKGLMIGNALLDDETDQKGMIEYAWD----HAVISDAL 261

Query: 103 HKGLFTNCD 111
           ++ +  NCD
Sbjct: 262 YEKVNKNCD 270

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q9M099|SCP24_ARATH Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 56/128 (43%), Gaps = 30/128 (23%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVTHL--- 66
           LE PAG+G SY+NT SD   + D+ TAQD+  F I WL R PQYK   F   G ++    
Sbjct: 127 LESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHY 186

Query: 67  -----------------------YFRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTH 103
                                   F  GNA  D+   +     + WT    HA  SD+++
Sbjct: 187 VPQLAKKINDYNKAFSKPIINLKGFLVGNAVTDNQYDSIGTVTYWWT----HAIISDKSY 242

Query: 104 KGLFTNCD 111
           K +   C+
Sbjct: 243 KSILKYCN 250

Active serine carboxypeptidase with broad substrate preference, including basic and hydrophilic groups. Processes a protein involved in an early event in the brassinosteroid signaling pathway.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

>sp|P08818|CBP2_HORVU Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 26/130 (20%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ PAG+G SY+NT SD   + D  TA DSY F  +W ER P YK   F   G
Sbjct: 129 KVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAG 188

Query: 63  ----------VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
                     ++ L  R             GN  +DD       FE  W  G++    SD
Sbjct: 189 ESYAGHYVPELSQLVHRSGNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIV----SD 244

Query: 101 QTHKGLFTNC 110
            T++ L   C
Sbjct: 245 DTYRRLKDAC 254

May be involved in the degradation of small peptides (2-5 residues) or in the degradation of storage proteins in the embryo.

Hordeum vulgare (taxid: 4513)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

>sp|Q1PF08|SCP22_ARATH Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 30/128 (23%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVT----- 64
           LE P G+G SY+NT SD+  + D+ TAQ++  F ISW+ R PQY+   F  +G +     
Sbjct: 125 LESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHY 184

Query: 65  --------HLY-------------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTH 103
                   H Y             F  GN  +D          + W+    HA  SD ++
Sbjct: 185 VPQLAQKIHEYNNAYKNPVINLKGFMVGNPEMDKNNDRLGTITYWWS----HAMISDASY 240

Query: 104 KGLFTNCD 111
             +  NCD
Sbjct: 241 NRILKNCD 248

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
357443921	495	Serine carboxypeptidase II-3 [Medicago t	0.904	0.210	0.447	2e-20
357443925	497	Serine carboxypeptidase-like protein [Me	0.904	0.209	0.447	3e-20
357443929	494	Serine carboxypeptidase-like protein [Me	0.939	0.218	0.442	3e-20
357462111	497	Serine carboxypeptidase-like protein [Me	0.904	0.209	0.447	4e-20
357443931	493	Serine carboxypeptidase II-3 [Medicago t	0.930	0.217	0.437	6e-20
357443923	495	Serine carboxypeptidase-like protein [Me	0.930	0.216	0.423	3e-19
34329345	495	putative serine carboxypeptidase [Medica	0.930	0.216	0.423	3e-19
357443919	495	Serine carboxypeptidase II-3 [Medicago t	0.904	0.210	0.425	4e-19
356552178	495	PREDICTED: serine carboxypeptidase II-3-	0.913	0.212	0.422	7e-19
363814475	496	uncharacterized protein LOC100820473 pre	0.913	0.211	0.414	3e-18

>gi|357443921|ref|XP_003592238.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|357462107|ref|XP_003601335.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|355481286|gb|AES62489.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|355490383|gb|AES71586.1| Serine carboxypeptidase II-3 [Medicago truncatula]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 75/134 (55%), Gaps = 30/134 (22%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+D+Y F I+WLER PQYKT  F   G 
Sbjct: 167 VANVLFLESPAGVGFSYSNTTSDYDNSGDKSTAKDAYVFLINWLERFPQYKTRAFYITGE 226

Query: 64  TH-----------------LY---------FRRGNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++                 LY            GNAW+DDATG   LF++ WT    HA 
Sbjct: 227 SYAGHYVPQLASTILHNNKLYNNTTINLKGISIGNAWIDDATGLRGLFDYLWT----HAL 282

Query: 98  NSDQTHKGLFTNCD 111
           NSDQTH+ +   CD
Sbjct: 283 NSDQTHELIEKYCD 296

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443925|ref|XP_003592240.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355481288|gb|AES62491.1| Serine carboxypeptidase-like protein [Medicago truncatula]

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 30/134 (22%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+DSY F I+WLER PQYKT  F   G 
Sbjct: 164 VANVLFLESPAGVGFSYSNTTSDYDKSGDKSTAKDSYVFLINWLERFPQYKTRAFYIAGE 223

Query: 64  TH-----------------LY---------FRRGNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++                 LY            GNAW+DDAT    LF++ WT    HA 
Sbjct: 224 SYAGHYVPQLASTILHNNKLYNNTVINLKGISIGNAWIDDATSLKGLFDYFWT----HAL 279

Query: 98  NSDQTHKGLFTNCD 111
           NSDQTH+ +   CD
Sbjct: 280 NSDQTHELIEKYCD 293

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443929|ref|XP_003592242.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|357462115|ref|XP_003601339.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355481290|gb|AES62493.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355490387|gb|AES71590.1| Serine carboxypeptidase-like protein [Medicago truncatula]

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 75/138 (54%), Gaps = 30/138 (21%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + LE PAG+G SYSNT SDY    DKSTA+D+Y F I+WLER PQYKT  F   G
Sbjct: 165 EVANILFLESPAGVGFSYSNTTSDYKKAGDKSTAKDAYVFLINWLERFPQYKTRDFYITG 224

Query: 63  VTH-----------------LYFRR---------GNAWVDDATGATDLFEHRWTTGLMHA 96
            ++                 LY +          GNAW+DDATG   LF++ WT    HA
Sbjct: 225 ESYAGHYVPQLASTILHHHKLYNKTIINLKGISIGNAWIDDATGDKGLFDYFWT----HA 280

Query: 97  FNSDQTHKGLFTNCDCVK 114
            NSDQTH+ +   CD  K
Sbjct: 281 LNSDQTHELIEKYCDFTK 298

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462111|ref|XP_003601337.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355490385|gb|AES71588.1| Serine carboxypeptidase-like protein [Medicago truncatula]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 30/134 (22%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+DSY F I+WLER PQYKT  F   G 
Sbjct: 164 VANVLFLESPAGVGFSYSNTTSDYDKSGDKSTAKDSYVFLINWLERFPQYKTRAFYIAGE 223

Query: 64  TH-----------------LY---------FRRGNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++                 LY            GNAW+DDAT    LF++ WT    HA 
Sbjct: 224 SYAGHYVPQLASTILHNNKLYNNTVINLKGISIGNAWIDDATSLKGLFDYFWT----HAL 279

Query: 98  NSDQTHKGLFTNCD 111
           NSDQTH+ +   CD
Sbjct: 280 NSDQTHELIEKYCD 293

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443931|ref|XP_003592243.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|357462117|ref|XP_003601340.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|355481291|gb|AES62494.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|355490388|gb|AES71591.1| Serine carboxypeptidase II-3 [Medicago truncatula]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 75/137 (54%), Gaps = 30/137 (21%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+DSY F I+WLER PQYKT  F   G 
Sbjct: 166 VANVLFLESPAGIGFSYSNTTSDYDKSGDKSTAKDSYVFLINWLERFPQYKTRDFYISGE 225

Query: 64  TH-----------------LY---------FRRGNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++                 LY            GNAW+DDAT    L+++ WT    HA 
Sbjct: 226 SYAGHYVPQLASTILHNNKLYKNTIINLKGISLGNAWIDDATSLKGLYDNLWT----HAL 281

Query: 98  NSDQTHKGLFTNCDCVK 114
           NSDQTH+ +   CD  K
Sbjct: 282 NSDQTHELIEKYCDFTK 298

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443923|ref|XP_003592239.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|357462109|ref|XP_003601336.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355481287|gb|AES62490.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355490384|gb|AES71587.1| Serine carboxypeptidase-like protein [Medicago truncatula]

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 30/137 (21%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+D+Y F I+WLER PQYKT  F   G 
Sbjct: 166 VANVLFLESPAGVGFSYSNTSSDYDNSGDKSTAKDAYVFLINWLERFPQYKTRDFYITGE 225

Query: 64  TH------------LYFRR--------------GNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++            LY  +              GNAW+DDAT    ++++ WT    HA 
Sbjct: 226 SYAGHYVPQLASTILYNNKLYNNTIINLKGISIGNAWIDDATNLKGIYDNLWT----HAL 281

Query: 98  NSDQTHKGLFTNCDCVK 114
           NSDQTH+ +   CD  K
Sbjct: 282 NSDQTHELIEKYCDFTK 298

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|34329345|gb|AAQ63884.1| putative serine carboxypeptidase [Medicago truncatula]

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 30/137 (21%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+D+Y F I+WLER PQYKT  F   G 
Sbjct: 166 VANVLFLESPAGVGFSYSNTSSDYDNSGDKSTAKDAYVFLINWLERFPQYKTRDFYITGE 225

Query: 64  TH------------LYFRR--------------GNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++            LY  +              GNAW+DDAT    ++++ WT    HA 
Sbjct: 226 SYAGHYVPQLASTILYNNKLYNNTIINLKGISIGNAWIDDATNLKGIYDNLWT----HAL 281

Query: 98  NSDQTHKGLFTNCDCVK 114
           NSDQTH+ +   CD  K
Sbjct: 282 NSDQTHELIEKYCDFTK 298

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443919|ref|XP_003592237.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|357462105|ref|XP_003601334.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|355481285|gb|AES62488.1| Serine carboxypeptidase II-3 [Medicago truncatula] gi|355490382|gb|AES71585.1| Serine carboxypeptidase II-3 [Medicago truncatula]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 73/134 (54%), Gaps = 30/134 (22%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
           +A  + LE PAG+G SYSNT SDY+ + DKSTA+D+Y F ++WLER PQYKT  F   G 
Sbjct: 166 VANVLFLESPAGVGFSYSNTTSDYDKSGDKSTAKDTYVFLVNWLERFPQYKTRDFYITGE 225

Query: 64  TH-----------------LY---------FRRGNAWVDDATGATDLFEHRWTTGLMHAF 97
           ++                 LY            GNAW+DDAT     F++ WT    HA 
Sbjct: 226 SYAGHYVPQLASTILHNNKLYNNTIVNLKGISIGNAWIDDATSLKGFFDYLWT----HAL 281

Query: 98  NSDQTHKGLFTNCD 111
           NSDQTH+ +   CD
Sbjct: 282 NSDQTHELIEKYCD 295

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552178|ref|XP_003544446.1| PREDICTED: serine carboxypeptidase II-3-like [Glycine max]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 30/135 (22%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTS------ 56
           N+A  I LE PAG+G SYSNT SDY    DKSTA DSYTF ++WLER PQYKT       
Sbjct: 167 NVANVIFLESPAGVGFSYSNTSSDYTKTGDKSTAMDSYTFLLNWLERFPQYKTRDLFITG 226

Query: 57  ------FFNTLGVTHLYFRR--------------GNAWVDDATGATDLFEHRWTTGLMHA 96
                 +   L  T L + +              GN W+DD      ++E+ WT    HA
Sbjct: 227 ESYAGHYVPQLADTILTYNKLTNHTVINLKGIAVGNGWIDDNMCGKGMYEYFWT----HA 282

Query: 97  FNSDQTHKGLFTNCD 111
            NSD+TH+G+   CD
Sbjct: 283 LNSDETHEGIQRYCD 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814475|ref|NP_001242872.1| uncharacterized protein LOC100820473 precursor [Glycine max] gi|255636975|gb|ACU18820.1| unknown [Glycine max]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 71/135 (52%), Gaps = 30/135 (22%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTS------ 56
           N+A  I LE PAG+G SYSNT SDY    DKSTA DSYTF ++WLER PQYKT       
Sbjct: 168 NVANVIFLESPAGVGFSYSNTSSDYTKTGDKSTAMDSYTFLLNWLERFPQYKTRDLFITG 227

Query: 57  ------FFNTLGVTHLYFRR--------------GNAWVDDATGATDLFEHRWTTGLMHA 96
                 +   L  T L + +              GN W+DD      ++E+ WT    HA
Sbjct: 228 ESYAGHYVPQLADTILTYNKLTNHTVINLKGIAVGNGWIDDNMCGKGMYEYFWT----HA 283

Query: 97  FNSDQTHKGLFTNCD 111
            NSD+TH+ +  +CD
Sbjct: 284 LNSDETHEEIQRHCD 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
TAIR|locus:2039275	452	scpl26 "serine carboxypeptidas	0.539	0.137	0.467	2.7e-14
TAIR|locus:2126644	479	scpl29 "serine carboxypeptidas	0.530	0.127	0.459	1.8e-13
TAIR|locus:2087368	502	scpl40 "serine carboxypeptidas	0.452	0.103	0.519	2.5e-13
TAIR|locus:2166870	499	SCPL34 "serine carboxypeptidas	0.530	0.122	0.426	7.4e-13
TAIR|locus:2077422	459	SCPL27 "serine carboxypeptidas	0.539	0.135	0.483	8.1e-12
TAIR|locus:2058734	462	scpl28 "serine carboxypeptidas	0.539	0.134	0.435	2.5e-11
TAIR|locus:2008480	463	SCPL32 "serine carboxypeptidas	0.530	0.131	0.491	4e-11
TAIR|locus:2181504	480	scpl35 "serine carboxypeptidas	0.530	0.127	0.360	9.3e-11
TAIR|locus:2102634	264	AT3G56540 [Arabidopsis thalian	0.547	0.238	0.444	8.3e-10
TAIR|locus:2078598	473	scpl25 "serine carboxypeptidas	0.382	0.093	0.522	1.1e-09

TAIR|locus:2039275 scpl26 "serine carboxypeptidase-like 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query:     4 MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
             +A  + LE PAG+G SYSNT SD     D+ TA+D+Y F + W ER PQYK   F   G 
Sbjct:   120 LANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGE 179

Query:    64 TH 65
             ++
Sbjct:   180 SY 181

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2126644 scpl29 "serine carboxypeptidase-like 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query:     5 AYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVT 64
             A  + L+ P G+G SYSNT SD   N DK TA+DS  F + W+ER P+YK   F  +G +
Sbjct:   127 ANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGES 186

Query:    65 H 65
             +
Sbjct:   187 Y 187

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0019932 "second-messenger-mediated signaling" evidence=RCA

TAIR|locus:2087368 scpl40 "serine carboxypeptidase-like 40" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query:     3 NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYK 54
             N A  + LE PAG+G SY+NT SD   + D++TA D+Y F ++WLER P+YK
Sbjct:   168 NAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYK 219

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2166870 SCPL34 "serine carboxypeptidase-like 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query:     5 AYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVT 64
             A  + LE P G+G SY+NT  D     D  TA+DSY F ++W +R PQYK+  F   G +
Sbjct:   141 ANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGES 200

Query:    65 H 65
             +
Sbjct:   201 Y 201

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2077422 SCPL27 "serine carboxypeptidase-like 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
 Identities = 30/62 (48%), Positives = 40/62 (64%)

Query:     4 MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
             +A  + LE PAG+G SYSNT SD     D+ TA+DSY F ++W ER PQYK   F  +G 
Sbjct:   124 LANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGE 183

Query:    64 TH 65
             ++
Sbjct:   184 SY 185

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2058734 scpl28 "serine carboxypeptidase-like 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query:     4 MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGV 63
             +A  + L+ PAG+G SY+NT SD     DK T +D+Y F + WLER P+YK   F   G 
Sbjct:   126 VANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGE 185

Query:    64 TH 65
             ++
Sbjct:   186 SY 187

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2008480 SCPL32 "serine carboxypeptidase-like 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
 Identities = 30/61 (49%), Positives = 35/61 (57%)

Query:     5 AYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVT 64
             A  + LE PAG+G SYSNT SDY    D  TA+DSYTF   W  R P YK   F   G +
Sbjct:   120 ANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGES 179

Query:    65 H 65
             +
Sbjct:   180 Y 180

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2181504 scpl35 "serine carboxypeptidase-like 35" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query:     5 AYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLGVT 64
             A  + LE P G+G SY+N   D     D+ TA DS  F I+W  + P++++S F   G +
Sbjct:   129 ANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGES 188

Query:    65 H 65
             +
Sbjct:   189 Y 189

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2102634 AT3G56540 [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 8.3e-10, P = 8.3e-10
 Identities = 28/63 (44%), Positives = 37/63 (58%)

Query:     3 NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
             N+A  + LE PAG G SY+NT +D     D  TA D+Y F + WLER P+YK   F   G
Sbjct:   165 NVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAG 224

Query:    63 VTH 65
              ++
Sbjct:   225 ESY 227

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2078598 scpl25 "serine carboxypeptidase-like 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query:    10 LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQY 53
             LE PAG+G SY+N  SD     D+ TA+DS  F I WL R P+Y
Sbjct:   131 LEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRY 174

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00014760001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (988 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	115
pfam00450	415	pfam00450, Peptidase_S10, Serine carboxypeptidase	3e-13
PLN03016	433	PLN03016, PLN03016, sinapoylglucose-malate O-sinap	7e-04
PLN02213	319	PLN02213, PLN02213, sinapoylglucose-malate O-sinap	0.002

>gnl|CDD|215926 pfam00450, Peptidase_S10, Serine carboxypeptidase

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 31/128 (24%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTS-FF---------- 58
           L+ P G+G SYSNT SDY  + D+ TA+D+Y F   + E+ P+YK + F+          
Sbjct: 89  LDQPVGVGFSYSNTTSDYKTD-DEETAKDNYEFLQKFFEKFPEYKNNPFYIAGESYAGHY 147

Query: 59  ------------NTLGVTHLYFRR---GNAWVDDATGATDLFEHRWTTGLMHAFNSDQTH 103
                             ++  +    GN   D A          +     H   SD+ +
Sbjct: 148 VPALAQEILDGNKKGTGPNINLKGVLIGNGLTDPAIQYNSYIPFAYY----HGLISDELY 203

Query: 104 KGLFTNCD 111
           + L   C 
Sbjct: 204 ESLKKACC 211

Length = 415

>gnl|CDD|178590 PLN03016, PLN03016, sinapoylglucose-malate O-sinapoyltransferase

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 4   MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
           MA  I L+ P G G SYS T  D     D S  + ++ F   WL R PQY ++    +G
Sbjct: 115 MANIIFLDQPVGSGFSYSKTPID--KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVG 171

Length = 433

>gnl|CDD|165857 PLN02213, PLN02213, sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 4  MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQY 53
          MA  I L+ P G G SYS T  D     D S  + ++ F   WL R PQY
Sbjct: 1  MANIIFLDQPVGSGFSYSKTPID--KTGDISEVKRTHEFLQKWLSRHPQY 48

Length = 319

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
KOG1282	454	consensus Serine carboxypeptidases (lysosomal cath	100.0
PLN02213	319	sinapoylglucose-malate O-sinapoyltransferase/ carb	99.97
PF00450	415	Peptidase_S10: Serine carboxypeptidase; InterPro:	99.97
PLN02209	437	serine carboxypeptidase	99.96
PLN03016	433	sinapoylglucose-malate O-sinapoyltransferase	99.96
PTZ00472	462	serine carboxypeptidase (CBP1); Provisional	99.93
KOG1283	414	consensus Serine carboxypeptidases [Posttranslatio	99.82
COG2939	498	Carboxypeptidase C (cathepsin A) [Amino acid trans	99.81
PF00681	45	Plectin: Plectin repeat; InterPro: IPR001101 Plect	90.66
TIGR03611	257	RutD pyrimidine utilization protein D. This protei	83.21

>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-35  Score=237.21  Aligned_cols=107  Identities=35%  Similarity=0.599  Sum_probs=100.8

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      ||.||||||||||||||||++++.++. ++|+.+|+|++.||+.||++||||++|||||+|            ++|++  
T Consensus       115 nk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N  193 (454)
T KOG1282|consen  115 NKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGN  193 (454)
T ss_pred             cccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcc
Confidence            789999999999999999999988886 799999999999999999999999999999999            44443  


Q ss_pred             ------------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCCCC
Q 037680           68 ------------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCV  113 (115)
Q Consensus        68 ------------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~  113 (115)
                                  ++||||++|+.+|..++.+|++.    |||||+++++.+++.|++.
T Consensus       194 ~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~----h~liSde~~~~l~~~C~~~  247 (454)
T KOG1282|consen  194 KKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWG----HGLISDELYESLKRACDFS  247 (454)
T ss_pred             ccccCCcccceEEEecCcccCccccccchhhhhhh----cccCCHHHHHHHHHHhccC
Confidence                        99999999999999999999999    9999999999999999873

>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase

Probab=99.97  E-value=3.1e-32  Score=211.14  Aligned_cols=102  Identities=26%  Similarity=0.331  Sum_probs=91.8

Q ss_pred             ceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh----
Q 037680            4 MAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY----   67 (115)
Q Consensus         4 ~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~----   67 (115)
                      .|||||||||+||||||++....+  .+++++|+++++||+.||++||+|+++||||+|            ++|++    
T Consensus         1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~   78 (319)
T PLN02213          1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI   78 (319)
T ss_pred             CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence            489999999999999998765444  466677799999999999999999999999999            44432    


Q ss_pred             ----------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCC
Q 037680           68 ----------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCD  111 (115)
Q Consensus        68 ----------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~  111 (115)
                                ++|||||+||..|..++.+|+|.    +|||++++++.+++.|.
T Consensus        79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~----~gli~~~~~~~~~~~c~  128 (319)
T PLN02213         79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYG----MGLISDEIYEPMKRICN  128 (319)
T ss_pred             ccCCceeeeEEEeCCCCCCccccchhHhhHHHh----cCCCCHHHHHHHHHhcC
Confidence                      99999999999999999999999    99999999999999996

>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.97  E-value=4.1e-31  Score=207.22  Aligned_cols=105  Identities=27%  Similarity=0.501  Sum_probs=91.1

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.||||||||||||||||+.....+. ++++++|+++++||+.||++||+|+++||||+|            .+|++  
T Consensus        83 ~~~an~l~iD~PvGtGfS~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~  161 (415)
T PF00450_consen   83 NKFANLLFIDQPVGTGFSYGNDPSDYV-WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQN  161 (415)
T ss_dssp             GGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHT
T ss_pred             ccccceEEEeecCceEEeecccccccc-chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcc
Confidence            688999999999999999998876555 799999999999999999999999999999999            33332  


Q ss_pred             ------------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCC
Q 037680           68 ------------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCD  111 (115)
Q Consensus        68 ------------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~  111 (115)
                                  ++|||||+||..|..++.+|++.    +|+|++++++.+.+.|+
T Consensus       162 ~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~----~gli~~~~~~~~~~~~~  213 (415)
T PF00450_consen  162 KKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYY----HGLIDDQQYDDLNKACE  213 (415)
T ss_dssp             CC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHH----TTSS-HHHHHHHHHHHT
T ss_pred             ccccccccccccceecCccccccccceeecccccc----cCcccHHHHHHHHHHhh
Confidence                        99999999999999999999999    99999999999999885

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....

>PLN02209 serine carboxypeptidase

Probab=99.96  E-value=3.7e-30  Score=207.12  Aligned_cols=104  Identities=24%  Similarity=0.297  Sum_probs=93.5

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.|||||||||+||||||+......  .+++++|+++++||+.||++||+|+++||||+|            ++|++  
T Consensus       115 ~~~anllfiDqPvGtGfSy~~~~~~~--~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~  192 (437)
T PLN02209        115 TKTANIIFLDQPVGSGFSYSKTPIER--TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGN  192 (437)
T ss_pred             hhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhc
Confidence            67899999999999999998776444  356677899999999999999999999999999            33422  


Q ss_pred             ------------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCC
Q 037680           68 ------------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCD  111 (115)
Q Consensus        68 ------------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~  111 (115)
                                  ++|||||+||..|..++.+|++.    +|||++++++.+++.|.
T Consensus       193 ~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~----~glI~~~~~~~~~~~c~  244 (437)
T PLN02209        193 YICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHG----MSLISDELYESLKRICK  244 (437)
T ss_pred             ccccCCceeeeeEEecCcccChhhhhhhHHHHHhc----cCCCCHHHHHHHHHhcc
Confidence                        89999999999999999999999    99999999999999996

>PLN03016 sinapoylglucose-malate O-sinapoyltransferase

Probab=99.96  E-value=5e-30  Score=206.17  Aligned_cols=105  Identities=26%  Similarity=0.316  Sum_probs=94.1

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.|||||||||+||||||+......  .+++++|+++++||+.||++||+|+++||||+|            ++|++  
T Consensus       113 ~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n  190 (433)
T PLN03016        113 TKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN  190 (433)
T ss_pred             hhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhc
Confidence            67899999999999999998776543  466677799999999999999999999999999            33422  


Q ss_pred             ------------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCCC
Q 037680           68 ------------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDC  112 (115)
Q Consensus        68 ------------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~  112 (115)
                                  ++||||++||..|..++.+|+|.    +|||++++++.+++.|..
T Consensus       191 ~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~----~glI~~~~~~~i~~~c~~  243 (433)
T PLN03016        191 YICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYG----MGLISDEIYEPMKRICNG  243 (433)
T ss_pred             ccccCCcccceeeEecCCCcCchhhhhhHHHHHHh----cCCCCHHHHHHHHHHhcc
Confidence                        89999999999999999999999    999999999999999963

>PTZ00472 serine carboxypeptidase (CBP1); Provisional

Probab=99.93  E-value=5.8e-26  Score=183.79  Aligned_cols=105  Identities=22%  Similarity=0.371  Sum_probs=92.2

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.+||||||||+||||||+... ++. .+++++|+|+++||+.||++||+++.+++||+|            .+|++  
T Consensus       119 ~~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n  196 (462)
T PTZ00472        119 NNEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGN  196 (462)
T ss_pred             ccccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhc
Confidence            67899999999999999998754 454 688999999999999999999999999999999            34431  


Q ss_pred             ------------hhccCCccCccccccchhhhhhh---cCCccCCCCHHHHHHHHh
Q 037680           68 ------------FRRGNAWVDDATGATDLFEHRWT---TGLMHAFNSDQTHKGLFT  108 (115)
Q Consensus        68 ------------i~IGNg~~d~~~~~~~~~~~~~~---~~~~~gli~~~~~~~~~~  108 (115)
                                  ++|||||+||.+|..++.+|+|.   +.+++|+|++++++.+++
T Consensus       197 ~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~  252 (462)
T PTZ00472        197 KKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSS  252 (462)
T ss_pred             cccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHH
Confidence                        99999999999999999999985   344579999999988864

>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=7.1e-21  Score=147.70  Aligned_cols=99  Identities=17%  Similarity=0.189  Sum_probs=88.8

Q ss_pred             cceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc----------------hhhh
Q 037680            3 NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG----------------VTHL   66 (115)
Q Consensus         3 ~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G----------------~~I~   66 (115)
                      +.|+|||||.|||+||||.+..+.|. ++.+++|.|+.+.|+.||..||||+.+||||+.                ..|.
T Consensus        70 k~adllfvDnPVGaGfSyVdg~~~Y~-~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk  148 (414)
T KOG1283|consen   70 KDADLLFVDNPVGAGFSYVDGSSAYT-TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK  148 (414)
T ss_pred             hhccEEEecCCCcCceeeecCccccc-ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence            67999999999999999999887776 899999999999999999999999999999997                2332


Q ss_pred             h---------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHH
Q 037680           67 Y---------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGL  106 (115)
Q Consensus        67 ~---------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~  106 (115)
                      +         +++|+.||.|..-..+..+|++.    .+++++...+..
T Consensus       149 ~G~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~----~S~LDD~GLds~  193 (414)
T KOG1283|consen  149 RGEIKLNFIGVALGDSWISPEDFVFSWGPLLKH----VSRLDDNGLDSS  193 (414)
T ss_pred             cCceeecceeEEccCcccChhHhhhcchHHHHh----hhhhcccCccch
Confidence            2         99999999999999999999999    899988776544

>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]

Probab=99.81  E-value=2e-20  Score=151.47  Aligned_cols=109  Identities=18%  Similarity=0.243  Sum_probs=93.7

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCC--cEEEEc------------hhhhh
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTS--FFNTLG------------VTHLY   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~--~~~i~G------------~~I~~   67 (115)
                      +.+++|||||||+|||||++... +.. .+...+.+|++.|++.||+.||+|.+.  ++||+|            ++|+.
T Consensus       144 ~~~adLvFiDqPvGTGfS~a~~~-e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~  221 (498)
T COG2939         144 LDFADLVFIDQPVGTGFSRALGD-EKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE  221 (498)
T ss_pred             ccCCceEEEecCcccCccccccc-ccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence            56899999999999999998322 333 788899999999999999999999888  999999            22222


Q ss_pred             -------------hhccCC-ccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCCC
Q 037680           68 -------------FRRGNA-WVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDC  112 (115)
Q Consensus        68 -------------i~IGNg-~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~  112 (115)
                                   ++|||| ||||.+|...|..++...+..++..+++.++.+.+.|..
T Consensus       222 ~~~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~  280 (498)
T COG2939         222 DNIALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAG  280 (498)
T ss_pred             hccccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhh
Confidence                         999999 999999999999999876666788999999999998864

>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes

Probab=90.66  E-value=0.26  Score=27.65  Aligned_cols=36  Identities=19%  Similarity=0.264  Sum_probs=29.4

Q ss_pred             hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHh
Q 037680           68 FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFT  108 (115)
Q Consensus        68 i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~  108 (115)
                      .++| |.+||.....-..+=|+.    .|+||++.+..+.+
T Consensus         8 ~~~g-Giidp~tg~~lsv~~A~~----~glId~~~~~~L~e   43 (45)
T PF00681_consen    8 LATG-GIIDPETGERLSVEEAIQ----RGLIDSDTAQKLLE   43 (45)
T ss_dssp             HTTT-SEEETTTTEEEEHHHHHH----TTSS-HHHHHHHHH
T ss_pred             eeee-eEEeCCCCeEEcHHHHHH----CCCcCHHHHHHHHc
Confidence            5666 999999887777788899    99999999988765

Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.

>TIGR03611 RutD pyrimidine utilization protein D

Probab=83.21  E-value=5.2  Score=28.06  Aligned_cols=49  Identities=14%  Similarity=0.129  Sum_probs=33.1

Q ss_pred             cceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc
Q 037680            3 NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG   62 (115)
Q Consensus         3 ~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G   62 (115)
                      +..+++-+|.| |.|.|-......   .+-++.++++.+++...       ...++++.|
T Consensus        38 ~~~~vi~~D~~-G~G~S~~~~~~~---~~~~~~~~~~~~~i~~~-------~~~~~~l~G   86 (257)
T TIGR03611        38 QRFHVVTYDHR-GTGRSPGELPPG---YSIAHMADDVLQLLDAL-------NIERFHFVG   86 (257)
T ss_pred             hccEEEEEcCC-CCCCCCCCCccc---CCHHHHHHHHHHHHHHh-------CCCcEEEEE
Confidence            35689999999 788885432221   35667777777777542       335689998

This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	115
1whs_A	255	Structure Of The Complex Of L-Benzylsuccinate With		2e-10
1wht_A	256	Structure Of The Complex Of L-Benzylsuccinate With		3e-10
1bcr_A	263	Complex Of The Wheat Serine Carboxypeptidase, Cpdw-		3e-10
3sc2_A	259	Refined Atomic Model Of Wheat Serine Carboxypeptida		3e-10
1gxs_A	270	Crystal Structure Of Hydroxynitrile Lyase From Sorg		6e-08

>pdb|1WHS|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 255

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ PAG+G SY+NT SD   + D  TA DSY F   W ER P YK   F   G
Sbjct: 92  KVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAG 151
Query: 63  ----------VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
                     ++ L  R             GN  +DD       FE  W  G++    SD
Sbjct: 152 ESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIV----SD 207
Query: 101 QTHKGLFTNC 110
            T++ L   C
Sbjct: 208 DTYRRLKEAC 217

>pdb|1WHT|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 256

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ PAG+G SY+NT SD   + D  TA DSY F   W ER P YK   F   G
Sbjct: 93  KVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAG 152
Query: 63  ----------VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
                     ++ L  R             GN  +DD       FE  W  G++    SD
Sbjct: 153 ESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIV----SD 208
Query: 101 QTHKGLFTNC 110
            T++ L   C
Sbjct: 209 DTYRRLKEAC 218

>pdb|1BCR|A Chain A, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii, With The Microbial Peptide Aldehyde Inhibitor, Antipain, And Arginine At Room Temperature Length = 263

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ PAG+G SY+NT SD   + D  TA DSY F   W ER P YK   F   G
Sbjct: 97  KVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAG 156
Query: 63  ----------VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
                     ++ L  R             GN  +DD       FE  W  G++    SD
Sbjct: 157 ESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIV----SD 212
Query: 101 QTHKGLFTNC 110
            T++ L   C
Sbjct: 213 DTYRRLKEAC 222

>pdb|3SC2|A Chain A, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii At 2.2- Angstroms Resolution Length = 259

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ PAG+G SY+NT SD   + D  TA DSY F   W ER P YK   F   G
Sbjct: 97  KVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAG 156
Query: 63  ----------VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
                     ++ L  R             GN  +DD       FE  W  G++    SD
Sbjct: 157 ESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIV----SD 212
Query: 101 QTHKGLFTNC 110
            T++ L   C
Sbjct: 213 DTYRRLKEAC 222

>pdb|1GXS|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Sorghum Bicolor In Complex With Inhibitor Benzoic Acid: A Novel Cyanogenic Enzyme Length = 270

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 11  ECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
           E PAG+G SYSNT SD +   DK  AQD+YTF + W ER P Y    F   G
Sbjct: 106 ESPAGVGFSYSNTSSDLSMGDDK-MAQDTYTFLVKWFERFPHYNYREFYIAG 156

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	115
1gxs_A	270	P-(S)-hydroxymandelonitrIle lyase chain A; inhibit	4e-13
1whs_A	255	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	2e-12
1ivy_A	452	Human protective protein; carboxypeptidase, serine	1e-10
1cpy_A	421	Serine carboxypeptidase; hydrolase (carboxypeptida	6e-10
1ac5_A	483	KEX1(delta)P; carboxypeptidase, hydrolase, glycopr	3e-08

>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 Length = 270

 Score = 62.4 bits (152), Expect = 4e-13
 Identities = 37/124 (29%), Positives = 50/124 (40%), Gaps = 27/124 (21%)

Query: 10  LECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------- 62
            E PAG+G SYSNT SD +   D   AQD+YTF + W ER P Y    F   G       
Sbjct: 105 AESPAGVGFSYSNTSSDLSMG-DDKMAQDTYTFLVKWFERFPHYNYREFYIAGESGHFIP 163

Query: 63  -VTHLYFRR--------------GNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLF 107
            ++ + +R                +   +D      +FE  W  GL+    SD+T     
Sbjct: 164 QLSQVVYRNRNNSPFINFQGLLVSSGLTNDHEDMIGMFESWWHHGLI----SDETRDSGL 219

Query: 108 TNCD 111
             C 
Sbjct: 220 KVCP 223

>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* Length = 255

 Score = 60.4 bits (147), Expect = 2e-12
 Identities = 42/132 (31%), Positives = 53/132 (40%), Gaps = 26/132 (19%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + L+ PAG+G SY+NT SD   + D  TA DSY F   W ER P YK   F   G
Sbjct: 92  KVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAG 151

Query: 63  ----------VTHLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAFNSD 100
                     ++ L  R             GN  +DD       FE  W     H   SD
Sbjct: 152 ESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWN----HGIVSD 207

Query: 101 QTHKGLFTNCDC 112
            T++ L   C  
Sbjct: 208 DTYRRLKEACLH 219

>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 Length = 452

 Score = 56.0 bits (135), Expect = 1e-10
 Identities = 28/129 (21%), Positives = 44/129 (34%), Gaps = 26/129 (20%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + LE PAG+G SYS+    Y  N D   AQ ++     +    P+YK +     G
Sbjct: 91  LIANVLYLESPAGVGFSYSDD-KFYATN-DTEVAQSNFEALQDFFRLFPEYKNNKLFLTG 148

Query: 63  ----------VTHLYFRR----------GNAWVDDATGATDLFEHRWTTGLMHAFNSDQT 102
                     +  L  +           GN           L    +  GL+     ++ 
Sbjct: 149 ESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLL----GNRL 204

Query: 103 HKGLFTNCD 111
              L T+C 
Sbjct: 205 WSSLQTHCC 213

>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* Length = 421

 Score = 53.8 bits (130), Expect = 6e-10
 Identities = 18/138 (13%), Positives = 36/138 (26%), Gaps = 33/138 (23%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            + +   L+ P  +G SYS +    N     +  +D Y F   + ++ P+Y         
Sbjct: 89  TVIF---LDQPVNVGFSYSGSSGVSN---TVAAGKDVYNFLELFFDQFPEYVNK-GQDFH 141

Query: 63  VT-------------HLYFRR------------GNAWVDDATGATDLFEHRWTTGLMHAF 97
           +                                GN   D  T            G   + 
Sbjct: 142 IAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSV 201

Query: 98  NSDQTHKGLFTNCD-CVK 114
              +    +  + + C+ 
Sbjct: 202 LPSEECSAMEDSLERCLG 219

>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 Length = 483

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 9/59 (15%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADK------STAQDSYTFPISWLERLPQYKT 55
           ++ +   ++ P G G S    K +   + +K         +    F  ++ +  P+  T
Sbjct: 112 DLLF---IDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLT 167

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	115
4az3_A	300	Lysosomal protective protein 32 kDa chain; hydrola	99.97
1gxs_A	270	P-(S)-hydroxymandelonitrIle lyase chain A; inhibit	99.97
1whs_A	255	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	99.97
1cpy_A	421	Serine carboxypeptidase; hydrolase (carboxypeptida	99.94
1ivy_A	452	Human protective protein; carboxypeptidase, serine	99.94
1ac5_A	483	KEX1(delta)P; carboxypeptidase, hydrolase, glycopr	99.94

>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*

Probab=99.97  E-value=5.4e-32  Score=207.81  Aligned_cols=104  Identities=26%  Similarity=0.402  Sum_probs=96.0

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.||||||||||||||||+... .+. ++++++|+++++||+.||++||+|++++|||+|            ++|++  
T Consensus        92 ~~~an~lfiD~PvGtGfSy~~~~-~~~-~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~  169 (300)
T 4az3_A           92 NLIANVLYLESPAGVGFSYSDDK-FYA-TNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDP  169 (300)
T ss_dssp             GGSSEEEEECCSTTSTTCEETTC-CCC-CBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCT
T ss_pred             HhhhcchhhcCCCcccccccCCC-ccc-ccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCC
Confidence            68899999999999999999865 354 799999999999999999999999999999999            44544  


Q ss_pred             ------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCC
Q 037680           68 ------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCD  111 (115)
Q Consensus        68 ------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~  111 (115)
                            ++|||||+||.+|..++.+|+|.    +|||++++++.+++.|+
T Consensus       170 ~inLkG~~iGNg~~d~~~~~~~~~~fa~~----~gli~~~~~~~~~~~c~  215 (300)
T 4az3_A          170 SMNLQGLAVGNGLSSYEQNDNSLVYFAYY----HGLLGNRLWSSLQTHCC  215 (300)
T ss_dssp             TSCEEEEEEESCCSBHHHHHHHHHHHHHH----TTSSCHHHHHHHHHHTE
T ss_pred             CcccccceecCCccCHHHhcchhHHHHhh----cCcCCHHHHHHHHHHHH
Confidence                  99999999999999999999999    99999999999999985

>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5

Probab=99.97  E-value=6.7e-32  Score=204.74  Aligned_cols=107  Identities=34%  Similarity=0.565  Sum_probs=97.9

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc----------hhhhh----
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG----------VTHLY----   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G----------~~I~~----   67 (115)
                      |+.||||||||||||||||+....++. .+++++|+++++||+.||++||+|++++|||+|          ++|++    
T Consensus        97 ~~~anllfiDqPvGtGfSy~~~~~~~~-~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESG~yvP~la~~i~~~n~~  175 (270)
T 1gxs_A           97 NKAANILFAESPAGVGFSYSNTSSDLS-MGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGESGHFIPQLSQVVYRNRNN  175 (270)
T ss_dssp             GGTSEEEEECCSTTSTTCEESSGGGGC-CCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEECTTHHHHHHHHHHHTTTT
T ss_pred             hccccEEEEeccccccccCCCCCcccc-CCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCCCcchHHHHHHHHhcccc
Confidence            688999999999999999998766665 799999999999999999999999999999999          23321    


Q ss_pred             --------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCCCC
Q 037680           68 --------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCV  113 (115)
Q Consensus        68 --------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~  113 (115)
                              ++||||++|+.+|..++.+|++.    ||+|++++++.+++.|.+.
T Consensus       176 ~~~inLkGi~ign~~~d~~~~~~~~~~~a~~----~gli~~~~~~~~~~~C~~~  225 (270)
T 1gxs_A          176 SPFINFQGLLVSSGLTNDHEDMIGMFESWWH----HGLISDETRDSGLKVCPGT  225 (270)
T ss_dssp             CTTCEEEEEEEESCCCBHHHHHHHHHHHHHH----TTCSCHHHHHHHHHHSTTC
T ss_pred             ccceeeeeEEEeCCccChhhhhhhHHHHHHh----cCCCCHHHHHHHHHHhccc
Confidence                    99999999999999999999999    9999999999999999864

>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*

Probab=99.97  E-value=4.5e-32  Score=204.27  Aligned_cols=107  Identities=38%  Similarity=0.610  Sum_probs=98.1

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCC-CCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh-
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDY-NPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY-   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~-~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~-   67 (115)
                      |+.||||||||||||||||+....++ . .+++++|+++++||+.||++||+|++++|||+|            ++|++ 
T Consensus        91 ~~~anvlfiDqPvGtGfSy~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~  169 (255)
T 1whs_A           91 NKVANVLFLDSPAGVGFSYTNTSSDIYT-SGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRS  169 (255)
T ss_dssp             GGTSEEEEECCSTTSTTCEESSGGGGGS-CCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEecCCCCccCCCcCcccccc-CCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHc
Confidence            68899999999999999999876566 4 699999999999999999999999999999999            34432 


Q ss_pred             ---------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCCCC
Q 037680           68 ---------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCDCV  113 (115)
Q Consensus        68 ---------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~  113 (115)
                               ++||||++||..|.+++.+|++.    ||+|++++++.+++.|...
T Consensus       170 n~~~inLkGi~ign~~~d~~~~~~~~~~~a~~----~gli~~~~~~~~~~~C~~~  220 (255)
T 1whs_A          170 KNPVINLKGFMVGNGLIDDYHDYVGTFEFWWN----HGIVSDDTYRRLKEACLHD  220 (255)
T ss_dssp             TCSSCEEEEEEEEEECCBHHHHHHHHHHHHHT----TTCSCHHHHHHHHHHHTTS
T ss_pred             CCcccccceEEecCCccCHHHhhhhHHHHHHH----cCCCCHHHHHHHHHhcccc
Confidence                     99999999999999999999999    9999999999999999864

>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*

Probab=99.94  E-value=1.8e-27  Score=189.63  Aligned_cols=104  Identities=20%  Similarity=0.252  Sum_probs=90.9

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCC--CcEEEEc------------hhhhh
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKT--SFFNTLG------------VTHLY   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~--~~~~i~G------------~~I~~   67 (115)
                      |+.||||||||||||||||+....  . .+++++|+++++||+.||++||+|++  ++|||+|            ++|++
T Consensus        85 ~~~an~lfiDqPvGtGfSy~~~~~--~-~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~  161 (421)
T 1cpy_A           85 NSNATVIFLDQPVNVGFSYSGSSG--V-SNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILS  161 (421)
T ss_dssp             GGGSEEECCCCSTTSTTCEESSCC--C-CSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTT
T ss_pred             ccccCEEEecCCCcccccCCCCCC--C-CChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHh
Confidence            688999999999999999987652  3 68899999999999999999999999  9999999            34432


Q ss_pred             ----------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHh
Q 037680           68 ----------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFT  108 (115)
Q Consensus        68 ----------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~  108 (115)
                                ++||||++||.+|..++.+|++..+..+++|++++++.+.+
T Consensus       162 ~n~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~g~~~~li~~~~~~~~~~  212 (421)
T 1cpy_A          162 HKDRNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMED  212 (421)
T ss_dssp             CSSCSSCCCEEEEESCCCCHHHHGGGHHHHHTTCSSSCCCSCHHHHHHHHH
T ss_pred             ccccccceeeEEecCcccChhhhhhhHHHHHhhcCCCCccCCHHHHHHHHH
Confidence                      99999999999999999999998544457999999887654

>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5

Probab=99.94  E-value=1.4e-27  Score=191.51  Aligned_cols=104  Identities=25%  Similarity=0.392  Sum_probs=93.9

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.+||||||||+||||||... .++. .+++++|+++++||+.||++||+|++++|||+|            .+|++  
T Consensus        90 ~~~~~~lfiDqP~GtGfS~~~~-~~~~-~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~  167 (452)
T 1ivy_A           90 NLIANVLYLESPAGVGFSYSDD-KFYA-TNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDP  167 (452)
T ss_dssp             GGSSEEEEECCSTTSTTCEESS-CCCC-CBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCT
T ss_pred             cccccEEEEecCCCCCcCCcCC-CCCc-CCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcC
Confidence            5889999999999999999654 3454 688999999999999999999999999999999            34432  


Q ss_pred             ------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCC
Q 037680           68 ------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCD  111 (115)
Q Consensus        68 ------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~  111 (115)
                            ++||||++||..|..++.+|+|.    +|||++++++.+++.|.
T Consensus       168 ~~~l~g~~ign~~~d~~~~~~~~~~~~~~----~glis~~~~~~~~~~c~  213 (452)
T 1ivy_A          168 SMNLQGLAVGNGLSSYEQNDNSLVYFAYY----HGLLGNRLWSSLQTHCC  213 (452)
T ss_dssp             TSCEEEEEEESCCSBHHHHHHHHHHHHHH----TTSSCHHHHHHHHHHHE
T ss_pred             ccccceEEecCCccChhhhhhhHHHHHhh----hhcCCHHHHHHHHHHhh
Confidence                  99999999999999999999999    99999999999999884

>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5

Probab=99.94  E-value=1.3e-27  Score=192.95  Aligned_cols=101  Identities=17%  Similarity=0.294  Sum_probs=87.7

Q ss_pred             CcceeeeEEeCCCCcccccccCCCC-------CCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSD-------YNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------   62 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~-------~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------   62 (115)
                      |+.+||||||||+||||||+....+       +. .+++++|+++++||+.||++||+|++++|||+|            
T Consensus       108 ~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~-~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a  186 (483)
T 1ac5_A          108 ISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFD-EDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFA  186 (483)
T ss_dssp             GGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSC-CSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHH
T ss_pred             hhcCCeEEEecCCCccccCCcCcccccccccccC-CCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHH
Confidence            6889999999999999999875432       44 688999999999999999999999999999999            


Q ss_pred             hhhh---------------h-hhccCCccCccccccchhhhhhhcCCccCCCCHHH--HHHHH
Q 037680           63 VTHL---------------Y-FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQT--HKGLF  107 (115)
Q Consensus        63 ~~I~---------------~-i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~--~~~~~  107 (115)
                      ++|+               + ++||||++||.+|..++.+|++.    +|||+++.  ++.+.
T Consensus       187 ~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~~~~~~~~~~f~~~----~gli~~~~~~~~~~~  245 (483)
T 1ac5_A          187 NAILNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAME----KKLIDESNPNFKHLT  245 (483)
T ss_dssp             HHHHHHHHHCCSTTSCCEEEEEEEEEECCCHHHHHTTHHHHHHH----TTSCCTTSTTHHHHH
T ss_pred             HHHHHhcccccccCcccceeeeEecCCcccchhhhccHHHHHHh----CCCCCccHHHHHHHH
Confidence            2221               1 99999999999999999999999    99999875  55543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	115
d1ivya_	452	c.69.1.5 (A:) Human 'protective protein', HPP {Hum	3e-05
g1wht.1	409	c.69.1.5 (A:,B:) Serine carboxypeptidase II {Wheat	2e-04
d1ac5a_	483	c.69.1.5 (A:) Serine carboxypeptidase II {Baker's	2e-04
d1wpxa1	421	c.69.1.5 (A:1-421) Serine carboxypeptidase II {Bak	0.002
g1gxs.1	425	c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (So	0.002

>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} Length = 452

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Human 'protective protein', HPP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 26/130 (20%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG 62
            +A  + LE PAG+G SYS+ K  +    D   AQ ++     +    P+YK +     G
Sbjct: 91  LIANVLYLESPAGVGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTG 148

Query: 63  VTHLYFRR--------------------GNAWVDDATGATDLFEHRWTTGLMHAFNSDQT 102
            ++                         GN           L    +  GL+     ++ 
Sbjct: 149 ESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLL----GNRL 204

Query: 103 HKGLFTNCDC 112
              L T+C  
Sbjct: 205 WSSLQTHCCS 214

>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} Length = 483

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 6/66 (9%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADK------STAQDSYTFPISWLERLPQYKTS 56
           +    + ++ P G G S    K +   + +K         +    F  ++ +  P+  T 
Sbjct: 109 SKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTR 168

Query: 57  FFNTLG 62
                G
Sbjct: 169 KIILSG 174

>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 421

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.4 bits (78), Expect = 0.002
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 3   NMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKT 55
           + A  I L+ P  +G SYS +    N     +  +D Y F   + ++ P+Y  
Sbjct: 86  SNATVIFLDQPVNVGFSYSGSSGVSN---TVAAGKDVYNFLELFFDQFPEYVN 135

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	115
g1wht.1	409	Serine carboxypeptidase II {Wheat (Triticum vulgar	99.95
d1ivya_	452	Human 'protective protein', HPP {Human (Homo sapie	99.95
g1gxs.1	425	Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T	99.95
d1ac5a_	483	Serine carboxypeptidase II {Baker's yeast (Sacchar	99.94
d1wpxa1	421	Serine carboxypeptidase II {Baker's yeast (Sacchar	99.94

>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Human 'protective protein', HPP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.8e-29  Score=196.75  Aligned_cols=104  Identities=26%  Similarity=0.402  Sum_probs=94.9

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------hhhhh--
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------VTHLY--   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------~~I~~--   67 (115)
                      |+.+|||||||||||||||++.. .+. +++.++|.|+++||+.||++||+|+++|+||+|            .+|++  
T Consensus        90 ~~~anllfIDqPvGtGfS~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~  167 (452)
T d1ivya_          90 NLIANVLYLESPAGVGFSYSDDK-FYA-TNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDP  167 (452)
T ss_dssp             GGSSEEEEECCSTTSTTCEESSC-CCC-CBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCT
T ss_pred             hcccCEEEEecCCCcccccCCCC-CCC-CCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcC
Confidence            68899999999999999999875 455 799999999999999999999999999999999            34443  


Q ss_pred             ------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcCC
Q 037680           68 ------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNCD  111 (115)
Q Consensus        68 ------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~  111 (115)
                            ++||||++|+..|..++.+|++.    ||+|++++++.+++.|.
T Consensus       168 ~i~l~Gi~igng~~d~~~~~~~~~~~~~~----~gli~~~~~~~~~~~~~  213 (452)
T d1ivya_         168 SMNLQGLAVGNGLSSYEQNDNSLVYFAYY----HGLLGNRLWSSLQTHCC  213 (452)
T ss_dssp             TSCEEEEEEESCCSBHHHHHHHHHHHHHH----TTSSCHHHHHHHHHHHE
T ss_pred             cccccceEcCCCccCchhcchhHHHHHHh----cccccchHHHHHHHHHh
Confidence                  99999999999999999999999    99999999999988774

>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]

Probab=99.94  E-value=8e-29  Score=196.84  Aligned_cols=95  Identities=16%  Similarity=0.293  Sum_probs=84.3

Q ss_pred             CcceeeeEEeCCCCcccccccCCC-------CCCCCCcHHHHHHHHHHHHHHHhhCCCCCCCcEEEEc------------
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKS-------DYNPNADKSTAQDSYTFPISWLERLPQYKTSFFNTLG------------   62 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~-------~~~~~~~~~~a~~~~~fL~~F~~~fP~~~~~~~~i~G------------   62 (115)
                      |+.||||||||||||||||+....       .+. .+++++|+++++||+.||++||+|++++|||+|            
T Consensus       108 n~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la  186 (483)
T d1ac5a_         108 ISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFD-EDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFA  186 (483)
T ss_dssp             GGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSC-CSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHH
T ss_pred             cccCCEEEEeCCCCcCeeecCCCCcccccccccc-CCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHH
Confidence            689999999999999999987542       233 688899999999999999999999999999999            


Q ss_pred             hhhhh----------------hhccCCccCccccccchhhhhhhcCCccCCCCHH
Q 037680           63 VTHLY----------------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQ  101 (115)
Q Consensus        63 ~~I~~----------------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~  101 (115)
                      .+|++                ++|||||+||.+|..++.+|++.    +|+|++.
T Consensus       187 ~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~~~q~~sy~~~~~~----~gli~~~  237 (483)
T d1ac5a_         187 NAILNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAME----KKLIDES  237 (483)
T ss_dssp             HHHHHHHHHCCSTTSCCEEEEEEEEEECCCHHHHHTTHHHHHHH----TTSCCTT
T ss_pred             HHHHHhccccccCCCcccceeeeecCCccChhhhhhhHHHHHHH----cCCCChH
Confidence            34432                89999999999999999999999    9999964

>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=8.8e-28  Score=187.15  Aligned_cols=106  Identities=21%  Similarity=0.255  Sum_probs=92.0

Q ss_pred             CcceeeeEEeCCCCcccccccCCCCCCCCCcHHHHHHHHHHHHHHHhhCCCC--CCCcEEEEc------------hhhhh
Q 037680            2 MNMAYAISLECPAGMGLSYSNTKSDYNPNADKSTAQDSYTFPISWLERLPQY--KTSFFNTLG------------VTHLY   67 (115)
Q Consensus         2 n~~an~lyiDqPvGvGfSy~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fP~~--~~~~~~i~G------------~~I~~   67 (115)
                      |+.||||||||||||||||+.++.  . .++.++|+|+++||+.||++||+|  +++||||+|            .+|++
T Consensus        85 ~~~anllfiD~PvGtGfSy~~~~~--~-~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~  161 (421)
T d1wpxa1          85 NSNATVIFLDQPVNVGFSYSGSSG--V-SNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILS  161 (421)
T ss_dssp             GGSSEEEEECCSTTSTTCBCSSCC--C-CSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEecCCCCCceecCCcc--c-cchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHH
Confidence            689999999999999999987653  2 589999999999999999999999  889999999            45543


Q ss_pred             ----------hhccCCccCccccccchhhhhhhcCCccCCCCHHHHHHHHhcC
Q 037680           68 ----------FRRGNAWVDDATGATDLFEHRWTTGLMHAFNSDQTHKGLFTNC  110 (115)
Q Consensus        68 ----------i~IGNg~~d~~~~~~~~~~~~~~~~~~~gli~~~~~~~~~~~C  110 (115)
                                ++||||++||.+|..++.+|++..++...++++++++.+.+.|
T Consensus       162 ~~~~~inlkGi~iGng~~dp~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  214 (421)
T d1wpxa1         162 HKDRNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSL  214 (421)
T ss_dssp             CSSCSSCCCEEEEESCCCCHHHHGGGHHHHHTTCSSSCCCSCHHHHHHHHHHH
T ss_pred             ccCCCcceeeeEecCCcccchhhhhhHHHHHhhcccccccCCHHHHHHHHHHH
Confidence                      9999999999999999999999944444589999987776644