Citrus Sinensis ID: 037760

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-
MKCLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISKPQDDWDSPYSRRCDRKPSDCPSGEGFLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAADLESTQYSSKHSNKKKRLKIIVAMSIISGMLILGLLLGMAWKKAKNK
cccccHHHHHHHHHHHHHccccccccccccccccccccEEEccccEEEEEccccccccccEEEEEEcccccEEEEEccccccccccccEEEEEccccEEEEcccccEEEEccccccccccEEEEEccccEEEEEcccccccccEEEccccccccccccccccccccccccEEEEEcccccccccccEEEEEEcccccEEEEEEccEEEEEEccccccEEEcccccccccccccEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccEEEcccccccccEEEcccccHHHHHHHHHcccccccccccccccccccEEEEcccccHHcccccccccccEEEEEccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHEEccccc
ccccHHHEEEEEEEEcccEEEEEEcccccccEEEccccEEEccccEEEEEEEcccccccEEEEEEEEEcccEEEEEEccccccccccEEEEEccccEEEEEcccccEEEEcccccccccHHHHHHccccEEEEEcccccccccEEEccccccccccccccccccccccccHHEEccccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEcccccccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEccccccEEEEEEccccccccHcHcccccEEccccccccccccccccccHHHHccccccccEEccccccccccEEEEccccccccccccccccHHHHHHHHHHccccEEEEccEccccccEEEEEcccHHHHHHHHHcccccccEEEEEEHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mkclpvfnFFYLLSFISVIElsfggdtitigqsisdgetlVSSSLRFelgffspgnsnnrylgiwykssprtVVWVANRykpitdkngvltlsnngsilllnqerstiwssnssrVLETAVVRLLDsgnlvlrdnvsrssdeymwqsfdypsdtllpgmklgwNLRTRFERYLTawrnaddptpgefsfrfDISTMAELVTVTGskievrsgpwngqqfvgipmffprlknkvyipmlvrtedeayytykpindkviprlyldqsgklqRFVWNQTSSewrmsyswpfdacdnyaqcgansncrisktpiceclagfiskpqddwdspysrrcdrkpsdcpsgegflklqrmklpenywsnksmnlKECEAECirncscrayansditgggdgclmwfGDLIdirecteefswgqdifirvpaadlestqysskhsnkkKRLKIIVAMSIISGMLILGLLLGMAWKKAKNK
MKCLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFfspgnsnnrylgIWYKSSPRTVVWVANRYkpitdkngvltlsNNGSILLLNQErstiwssnssrVLETAVVRlldsgnlvlrdnvsrssdeyMWQSFdypsdtllpgMKLGWNLRTRFERYLTAwrnaddptpgeFSFRFDISTMAELVTVTGSKievrsgpwngQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFiskpqddwdspysrrcdrkpsdcpsgegflklqrmKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAAdlestqysskhsnkkkrlKIIVAMSIISGMLILGLLLGMAWKKAKNK
MKCLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISKPQDDWDSPYSRRCDRKPSDCPSGEGFLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAADLESTQYSSKHSNKKKRLKIIVAmsiisgmlilglllgmAWKKAKNK
**CLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISK*************************FLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAADL**************RLKIIVAMSIISGMLILGLLLGMA*******
**CLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISKPQ**W**PYS*RCD*KPSD*PSGEGFLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAAD*****************KIIVAMSIISGMLILGLLLGMAWKKAKNK
MKCLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISKPQD*****************PSGEGFLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAADLE************KRLKIIVAMSIISGMLILGLLLGMAWKKAKNK
**CLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISKPQDDWDSPYSRRCDRKPSDCPSGEGFLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAADLESTQYS**HSNKKKRLKIIVAMSIISGMLILGLLLGMAWKKAK**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooo
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MKCLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRISKTPICECLAGFISKPQDDWDSPYSRRCDRKPSDCPSGEGFLKLQRMKLPENYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIRVPAADLESTQYSSKHSNKKKRLKIIVAMSIISGMLILGLLLGMAWKKAKNK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query471 2.2.26 [Sep-21-2011]
O81832 783 G-type lectin S-receptor- yes no 0.904 0.544 0.434 3e-99
O81905 850 Receptor-like serine/thre no no 0.921 0.510 0.378 7e-87
P17840435 S-locus-specific glycopro N/A no 0.878 0.951 0.402 2e-85
P07761436 S-locus-specific glycopro N/A no 0.876 0.947 0.396 6e-83
Q09092 857 Putative serine/threonine N/A no 0.942 0.518 0.374 8e-82
Q39086 843 Receptor-like serine/thre no no 0.891 0.498 0.372 3e-81
P22553435 S-locus-specific glycopro N/A no 0.874 0.947 0.392 4e-80
Q9S972 847 Receptor-like serine/thre no no 0.898 0.499 0.371 1e-79
P0DH86 853 G-type lectin S-receptor- no no 0.923 0.509 0.369 4e-77
P0DH87546 Putative inactive G-type no no 0.925 0.798 0.366 1e-76
>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4 Back     alignment and function desciption
 Score =  362 bits (929), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 194/447 (43%), Positives = 273/447 (61%), Gaps = 21/447 (4%)

Query: 8   NFFYLL--SFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIW 65
           N  +LL  S  S I L+   D +   Q++ DG+T+VS    FE+GFFSPG S NRYLGIW
Sbjct: 5   NVLHLLIISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIW 64

Query: 66  YKS-SPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETA---- 120
           YK  S +TVVWVANR  P+ D +G L +S NGS+ L N     IWSS+SS   + A    
Sbjct: 65  YKKISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRN 124

Query: 121 -VVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNA 179
            +V++LD+GNLV+R+  S    +Y+WQS DYP D  LPGMK G N  T   R+LT+WR  
Sbjct: 125 PIVQILDTGNLVVRN--SGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAI 182

Query: 180 DDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLV 239
           DDP+ G ++ + D + + +      S +  R+GPWNG +F G+P   P   N +Y    V
Sbjct: 183 DDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKP---NPIYRYEYV 239

Query: 240 RTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGA 299
            TE+E YYTYK  N  V+ R+ L+ +G LQR+ W      W    S   D+CD Y  CG+
Sbjct: 240 FTEEEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGS 299

Query: 300 NSNCRISKTPICECLAGFISKPQDDWDS-PYSRRCDRKPS-DCPSGE-GFLKLQRMKLPE 356
             +C I+++P C CL GF++K    W +  +S  C R+   DC  GE GFLK+ ++KLP+
Sbjct: 300 YGSCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPD 359

Query: 357 NY--WSNKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWG 414
               W +K+M+L EC+  C+RNC+C AY+  DI  GG GC++WFGDLIDIRE  E    G
Sbjct: 360 TRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNEN---G 416

Query: 415 QDIFIRVPAADLESTQYSSKHSNKKKR 441
           QD+++R+ ++++E+ Q  S   + +K+
Sbjct: 417 QDLYVRLASSEIETLQRESSRVSSRKQ 443

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1 Back     alignment and function description
>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description
>sp|P07761|SLSG6_BRAOL S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description
>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2 Back     alignment and function description
>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1 Back     alignment and function description
>sp|P22553|SLSG2_BRAOA S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description
>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2 Back     alignment and function description
>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1 Back     alignment and function description
>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
224115098 802 predicted protein [Populus trichocarpa] 0.955 0.561 0.538 1e-130
359493711 1081 PREDICTED: G-type lectin S-receptor-like 0.900 0.392 0.519 1e-120
147856585 741 hypothetical protein VITISV_033399 [Viti 0.876 0.557 0.527 1e-114
359493727 1767 PREDICTED: uncharacterized protein LOC10 0.938 0.250 0.466 1e-112
359493740 2422 PREDICTED: uncharacterized protein LOC10 0.934 0.181 0.462 1e-112
302143151 817 unnamed protein product [Vitis vinifera] 0.859 0.495 0.495 1e-110
147799241 818 hypothetical protein VITISV_027305 [Viti 0.957 0.551 0.469 1e-110
359493732 777 PREDICTED: G-type lectin S-receptor-like 0.859 0.521 0.490 1e-110
359493725 1593 PREDICTED: uncharacterized protein LOC10 0.910 0.269 0.470 1e-109
359493717 641 PREDICTED: G-type lectin S-receptor-like 0.944 0.694 0.465 1e-109
>gi|224115098|ref|XP_002316939.1| predicted protein [Populus trichocarpa] gi|222860004|gb|EEE97551.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/470 (53%), Positives = 326/470 (69%), Gaps = 20/470 (4%)

Query: 1   MKCLPVFNFFYLLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNR 60
           M+ LP F FF  L   S+  LSF  D IT    + DG+TL+S S  FELGFFSPG S  R
Sbjct: 1   MESLPFFIFFSTLFIQSLHFLSFSADIITPDLPVKDGQTLISVSQSFELGFFSPGTSKYR 60

Query: 61  YLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETA 120
           Y+GIWYK SP TVVWVANR  P+TD  GVLT+ N G+++LL+Q ++ IWSSNSS ++   
Sbjct: 61  YVGIWYKKSPETVVWVANRNNPLTDHFGVLTIDNRGNLVLLDQIKNIIWSSNSSSIIAGP 120

Query: 121 VVRLLDSGNLVLRDN-VSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNA 179
           V +LLDSGNLV+RDN  SR+++ Y WQSFD PSDTLLPGMKLGWNL+T  ERYL  WR+ 
Sbjct: 121 VAQLLDSGNLVVRDNGSSRNTESYRWQSFDQPSDTLLPGMKLGWNLKTGQERYLITWRSI 180

Query: 180 DDPTPGEFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLV 239
            DP+PG+F++R DI  + +L  V GS  +VRSGPWNG  F G     P++ N V+ P+LV
Sbjct: 181 SDPSPGDFTYRLDIHGLPQLFIVVGSVKKVRSGPWNGIFFGGT----PKVHNSVFEPILV 236

Query: 240 RTEDEAYYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGA 299
           R EDE YYTY+ +N+ V  RL L+QSG ++R V    +S W   YS P D C+NY QCGA
Sbjct: 237 RNEDEIYYTYRLLNNSVCSRLTLNQSGAVERLVMYGQNSGWTTIYSVPVDTCENYGQCGA 296

Query: 300 NSNCRISKTPICECLAGFISKPQDDWDSPY---SRRCD-RKPSDCPSGEGFLKLQRMKLP 355
           N  CR   +PICECL GF S P+++ D      SR+C+ R   DC SGEGFLKL  +KLP
Sbjct: 297 NGICRTRTSPICECLKGFKSIPEEELDIQNFYGSRKCETRLTLDCQSGEGFLKLPGVKLP 356

Query: 356 E--NYWSNKSMNLKECEAECIRNCSCRAYANSDITGGGD--GCLMWFGDLIDIRECTEEF 411
           +   +  N+SMNLKECEAEC +NCSC A+A ++++GGGD  GCLMWFG+LIDIRE +   
Sbjct: 357 DLLEFRLNESMNLKECEAECFKNCSCSAFATTNLSGGGDGSGCLMWFGNLIDIREQSGS- 415

Query: 412 SWGQDIFIRVPAADLESTQYSSKHSNKKKRLK--IIVAMSIISGMLILGL 459
           + GQDI IRVPA++LE     ++ S +KK LK  ++ +MS + G+ + G+
Sbjct: 416 TIGQDIHIRVPASELE----MARSSKRKKMLKTALVASMSALLGIFVSGM 461

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359493711|ref|XP_002281022.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147856585|emb|CAN80325.1| hypothetical protein VITISV_033399 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493727|ref|XP_002280656.2| PREDICTED: uncharacterized protein LOC100243545 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493740|ref|XP_002280379.2| PREDICTED: uncharacterized protein LOC100262430 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143151|emb|CBI20446.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147799241|emb|CAN77004.1| hypothetical protein VITISV_027305 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493732|ref|XP_003634657.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493725|ref|XP_002280679.2| PREDICTED: uncharacterized protein LOC100260657 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493717|ref|XP_002280926.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
TAIR|locus:2131684 783 AT4G27290 [Arabidopsis thalian 0.893 0.537 0.437 1e-98
TAIR|locus:2141181 850 RK3 "receptor kinase 3" [Arabi 0.887 0.491 0.392 1.1e-85
TAIR|locus:2018546 843 RK1 "receptor kinase 1" [Arabi 0.898 0.501 0.377 1.2e-81
TAIR|locus:2018506 847 RK2 "receptor kinase 2" [Arabi 0.900 0.500 0.372 2.9e-80
TAIR|locus:2131694 815 AT4G27300 [Arabidopsis thalian 0.870 0.503 0.380 1.4e-73
TAIR|locus:2059103 828 AT2G19130 [Arabidopsis thalian 0.902 0.513 0.360 3.7e-71
TAIR|locus:2088619439 AT3G12000 [Arabidopsis thalian 0.819 0.879 0.382 3.5e-68
TAIR|locus:2141176 849 B120 [Arabidopsis thaliana (ta 0.883 0.489 0.360 2e-65
TAIR|locus:2200888 804 AT1G61500 [Arabidopsis thalian 0.864 0.506 0.353 1.1e-62
TAIR|locus:2200151 830 SD1-13 "S-domain-1 13" [Arabid 0.942 0.534 0.322 1.8e-62
TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
 Identities = 193/441 (43%), Positives = 273/441 (61%)

Query:    12 LLSFISVIELSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKS-SP 70
             ++S  S I L+   D +   Q++ DG+T+VS    FE+GFFSPG S NRYLGIWYK  S 
Sbjct:    11 IISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYKKISL 70

Query:    71 RTVVWVANRYKPITDKNGVLTLSNNGSILLLNQERSTIWSSNSS-----RVLETAVVRLL 125
             +TVVWVANR  P+ D +G L +S NGS+ L N     IWSS+SS       L   +V++L
Sbjct:    71 QTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPIVQIL 130

Query:   126 DSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPTPG 185
             D+GNLV+R+  S    +Y+WQS DYP D  LPGMK G N  T   R+LT+WR  DDP+ G
Sbjct:   131 DTGNLVVRN--SGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDDPSTG 188

Query:   186 EFSFRFDISTMAELVTVTGSKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTEDEA 245
              ++ + D + + +      S +  R+GPWNG +F G+P   P   N +Y    V TE+E 
Sbjct:   189 NYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKP---NPIYRYEYVFTEEEV 245

Query:   246 YYTYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPFDACDNYAQCGANSNCRI 305
             YYTYK  N  V+ R+ L+ +G LQR+ W      W    S   D+CD Y  CG+  +C I
Sbjct:   246 YYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSCNI 305

Query:   306 SKTPICECLAGFISKPQDDWDS-PYSRRCDRKPS-DCPSGE-GFLKLQRMKLPENY--WS 360
             +++P C CL GF++K    W +  +S  C R+   DC  GE GFLK+ ++KLP+    W 
Sbjct:   306 NESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTSWY 365

Query:   361 NKSMNLKECEAECIRNCSCRAYANSDITGGGDGCLMWFGDLIDIRECTEEFSWGQDIFIR 420
             +K+M+L EC+  C+RNC+C AY+  DI  GG GC++WFGDLIDIRE  E    GQD+++R
Sbjct:   366 DKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNEN---GQDLYVR 422

Query:   421 VPAADLESTQY-SSKHSNKKK 440
             + ++++E+ Q  SS+ S++K+
Sbjct:   423 LASSEIETLQRESSRVSSRKQ 443
GO:0004672 "protein kinase activity" evidence=IEA;ISS
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0004713 "protein tyrosine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0048544 "recognition of pollen" evidence=IEA
GO:0048765 "root hair cell differentiation" evidence=RCA
TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 5e-39
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 1e-36
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 3e-36
pfam00954110 pfam00954, S_locus_glycop, S-locus glycoprotein fa 4e-28
pfam0827666 pfam08276, PAN_2, PAN-like domain 6e-27
cd0109884 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain 2e-21
smart0047378 smart00473, PAN_AP, divergent subfamily of APPLE d 1e-08
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information 
 Score =  137 bits (346), Expect = 5e-39
 Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 5/120 (4%)

Query: 32  QSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLT 91
             +S G+TLVSS   FELGFF     +  Y  I YK S RTVVWVANR  P +  +  LT
Sbjct: 2   NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNP-SGSSCTLT 60

Query: 92  LSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYP 151
           L ++G++++ +   + +WSSN++RV    V+ LLD GNLVL D    S   ++WQSFDYP
Sbjct: 61  LQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYD----SDGNFLWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family Back     alignment and domain information
>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain Back     alignment and domain information
>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 471
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.93
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.93
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.92
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.89
PF0827666 PAN_2: PAN-like domain; InterPro: IPR013227 PAN do 99.66
cd0012980 PAN_APPLE PAN/APPLE-like domain; present in N-term 99.5
cd0109884 PAN_AP_plant Plant PAN/APPLE-like domain; present 99.49
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 98.89
smart0047378 PAN_AP divergent subfamily of APPLE domains. Apple 98.58
smart00108114 B_lectin Bulb-type mannose-specific lectin. 98.47
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 98.27
cd0110073 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d 97.3
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 97.22
PF0002479 PAN_1: PAN domain This Prosite entry concerns appl 92.37
PF04478154 Mid2: Mid2 like cell wall stress sensor; InterPro: 92.26
smart0022379 APPLE APPLE domain. Four-fold repeat in plasma kal 89.89
PF0869340 SKG6: Transmembrane alpha-helix domain; InterPro: 86.86
smart0060594 CW CW domain. 84.32
PF0827771 PAN_3: PAN-like domain; InterPro: IPR006583 PAN do 82.81
PF02009299 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00 82.36
PF0243938 Adeno_E3_CR2: Adenovirus E3 region protein CR2; In 81.6
PF01102122 Glycophorin_A: Glycophorin A; InterPro: IPR001195 80.07
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information 
Probab=99.93  E-value=1.5e-27  Score=205.34  Aligned_cols=110  Identities=50%  Similarity=0.801  Sum_probs=80.2

Q ss_pred             CCeEEEEecCCCCCCC--CCceEEEccCCcEEEEeCCCceEEee-cCCCCc-cceEEEEecCCCEEEEeCcCCCCCceee
Q 037760           70 PRTVVWVANRYKPITD--KNGVLTLSNNGSILLLNQERSTIWSS-NSSRVL-ETAVVRLLDSGNLVLRDNVSRSSDEYMW  145 (471)
Q Consensus        70 ~~~~vW~an~~~pv~~--~~~~l~l~~~GnLvl~d~~~~~vWss-~~~~~~-~~~~~~Lld~GNlvl~~~~~~~~~~~~W  145 (471)
                      ++++||+|||+.|+..  ...+|.|++||||||+|..+..+|++ .+.+.. ....++|+|+|||||++.    .+.++|
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~----~~~~lW   76 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS----SGNVLW   76 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET----TSEEEE
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee----cceEEE
Confidence            3689999999999854  24789999999999999998899999 555443 468899999999999996    678999


Q ss_pred             eeccCCCCCCCCCCeeeeeccCCceeEEEEecCCCCCC
Q 037760          146 QSFDYPSDTLLPGMKLGWNLRTRFERYLTAWRNADDPT  183 (471)
Q Consensus       146 qSFd~PTDTLLPGq~L~~~~~tg~~~~L~Sw~s~~dps  183 (471)
                      |||||||||+||||+|+.+..+|.+..++||++.+|||
T Consensus        77 ~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   77 QSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             ESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             eecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999999999876666666799999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins Back     alignment and domain information
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>smart00473 PAN_AP divergent subfamily of APPLE domains Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region Back     alignment and domain information
>smart00223 APPLE APPLE domain Back     alignment and domain information
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ] Back     alignment and domain information
>smart00605 CW CW domain Back     alignment and domain information
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world Back     alignment and domain information
>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host [] Back     alignment and domain information
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 2e-12
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 9e-11
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 1e-10
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 3e-10
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 6e-10
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 5e-09
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 3e-08
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 2e-07
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 6e-07
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 1e-05
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
 Score = 62.6 bits (152), Expect = 2e-12
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 18/125 (14%)

Query: 26  DTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITD 85
           + +T G+ +  G++L      +        N       + Y  S  T VW +N       
Sbjct: 2   NLLTNGEGLYAGQSLDVE--PYHFIMQEDCNL------VLYDHS--TSVWASNTGILGKK 51

Query: 86  KNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMW 145
                 L ++G+ ++ + E  ++W+S+S R     V+ L + GN+V+  +        +W
Sbjct: 52  -GCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD-------IW 103

Query: 146 QSFDY 150
            +  Y
Sbjct: 104 STGTY 108
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 100.0
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.86
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.86
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.85
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.82
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.82
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.78
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.74
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.74
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.69
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.61
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.6
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.59
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.55
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.53
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.31
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.31
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.22
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.17
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.14
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.05
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 98.9
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 98.58
2ll3_A82 Micronemal protein 4; cell adhesion; NMR {Toxoplas 89.15
2ks1_B44 Epidermal growth factor receptor; ERBB1, ERBB2, tr 80.96
2l2t_A44 Receptor tyrosine-protein kinase ERBB-4; transmemb 80.9
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-40  Score=326.49  Aligned_cols=233  Identities=21%  Similarity=0.240  Sum_probs=178.1

Q ss_pred             ccccccccCCCCccCCCCeEEeCCCeeEEEEECCCCCCceEEEEEEeCCCCeEEEEecCCCCCCCC----CceEEEccCC
Q 037760           21 LSFGGDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDK----NGVLTLSNNG   96 (471)
Q Consensus        21 ~~~~~~~l~~g~~L~~~~~L~S~~g~F~lgf~~~~~~~~~yl~i~~~~~~~~~vW~an~~~pv~~~----~~~l~l~~~G   96 (471)
                      ++++.|+|.+|++|++|++|+|++|.|+||||.++   ++||   |+ +.+ +||+|||++|+.++    +++|+|+.||
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~-~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G   81 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD-NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYV   81 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE-TTE-EEEECSTTSTTEEEEECCCTTCCSEEEE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC-CCC-eEEECCCCCCcCCcccccceEEEEeCCC
Confidence            34567999999999999999999999999999543   4666   76 666 99999999998764    6899999999


Q ss_pred             cEEE--EeCCCceEEeecCCCC-----ccceEEEEecCCCEEEEeCcCCCCCceeeeeccCCCCCCCCCCeeeeeccCCc
Q 037760           97 SILL--LNQERSTIWSSNSSRV-----LETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSDTLLPGMKLGWNLRTRF  169 (471)
Q Consensus        97 nLvl--~d~~~~~vWss~~~~~-----~~~~~~~Lld~GNlvl~~~~~~~~~~~~WqSFd~PTDTLLPGq~L~~~~~tg~  169 (471)
                      ||||  .|+++.+||++++...     ...+.|+|+|+|||||++      +.++|||  ||||||||||+++.+.++|+
T Consensus        82 ~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~------~~~lWqS--~ptdtlLpg~~~~~~l~~g~  153 (276)
T 3m7h_A           82 QYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD------SLALWNG--TPAIPLVPGAIDSLLLAPGS  153 (276)
T ss_dssp             SSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE------EEEEEES--CTTSCCCCSCTTCEEECSSE
T ss_pred             cEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC------CceeeCc--ccccccccccccccccccCc
Confidence            9999  7878899999997642     235789999999999996      3589999  99999999999888887775


Q ss_pred             eeEEEEecCCCCCCCceEEEEEccCCCeeEEEeeC-ceeeeeeCCCCCceeeccccccccCCCceeeeEEEecCC-eeEE
Q 037760          170 ERYLTAWRNADDPTPGEFSFRFDISTMAELVTVTG-SKIEVRSGPWNGQQFVGIPMFFPRLKNKVYIPMLVRTED-EAYY  247 (471)
Q Consensus       170 ~~~L~Sw~s~~dps~G~f~l~l~~~g~~~~~~~~~-~~~Yw~sg~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~  247 (471)
                      .  |   ++.+||++|.|+++|+++|.  +++++. ..+||++++|+.....  ..+..   ..  .+.+.++++ .++.
T Consensus       154 ~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~--l~l~~---dG--nLvl~d~~~~~vWs  219 (276)
T 3m7h_A          154 E--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVR--AVFQG---DG--NLVVYGAGNAVLWH  219 (276)
T ss_dssp             E--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCE--EEECT---TS--CEEEECTTSCEEEE
T ss_pred             c--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEE--EEEcC---CC--eEEEEeCCCcEEEE
Confidence            4  5   57889999999999999995  555654 5899999998653211  12221   11  233344333 3333


Q ss_pred             EEEecCCCceeEEEEccCCcEEEEEeecCCCCeeEeeeccC
Q 037760          248 TYKPINDKVIPRLYLDQSGKLQRFVWNQTSSEWRMSYSWPF  288 (471)
Q Consensus       248 ~~~~~~~~~~~rl~ld~dG~l~~y~w~~~~~~W~~~~~~p~  288 (471)
                      ++..  ....+|++|+.||++++|.|   ...|...+..|.
T Consensus       220 S~t~--~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P~  255 (276)
T 3m7h_A          220 SHTG--GHASAVLRLQANGSIAILDE---KPVWARFGFQPT  255 (276)
T ss_dssp             CSCT--TCTTCEEEECTTSCEEEEEE---EEEEESSSCCTT
T ss_pred             ecCC--CCCCEEEEEcCCccEEEEcC---CCeEEccCccCC
Confidence            3322  22347999999999999998   234666555553
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* Back     alignment and structure
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} Back     alignment and structure
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 471
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 7e-21
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 1e-14
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 2e-13
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 1e-12
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 4e-07
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 5e-06
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 85.4 bits (211), Expect = 7e-21
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 18/125 (14%)

Query: 26  DTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITD 85
           + +T G+ +  G++L           +      +  L ++      T VW +N       
Sbjct: 2   NLLTNGEGLYAGQSLDV-------EPYHFIMQEDCNLVLYD---HSTSVWASNTGILG-K 50

Query: 86  KNGVLTLSNNGSILLLNQERSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMW 145
           K     L ++G+ ++ + E  ++W+S+S R     V+ L + GN+V+  +        +W
Sbjct: 51  KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD-------IW 103

Query: 146 QSFDY 150
            +  Y
Sbjct: 104 STGTY 108
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.86
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.84
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.83
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.66
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.61
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.53
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.49
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.37
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.09
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.03
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 98.86
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 98.8
d1emoa239 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 91.34
d2qj2a191 Hepatocyte growth factor {Human (Homo sapiens) [Ta 82.95
d2vj3a142 Neurogenic locus notch homolog protein 1, Notch1 { 82.61
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.86  E-value=1.8e-21  Score=163.94  Aligned_cols=112  Identities=21%  Similarity=0.420  Sum_probs=94.5

Q ss_pred             ccccCCCCccCCCCeEEeCCCeeEEEEECCCCCCceEEEEEEeCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEeCC
Q 037760           25 GDTITIGQSISDGETLVSSSLRFELGFFSPGNSNNRYLGIWYKSSPRTVVWVANRYKPITDKNGVLTLSNNGSILLLNQE  104 (471)
Q Consensus        25 ~~~l~~g~~L~~~~~L~S~~g~F~lgf~~~~~~~~~yl~i~~~~~~~~~vW~an~~~pv~~~~~~l~l~~~GnLvl~d~~  104 (471)
                      +|+|.+||.|..|++|++  |.|+|.||.+++     |.++ .  ..++||.|+++.+.  .++.|+|+.||||||+|. 
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly-~--~~~~vW~s~~~~~~--~~~~l~l~~dGnLvl~~~-   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLY-D--NNRAVWASGTNGKA--SGCVLKMQNDGNLVIYSG-   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEE-E--TTEEEEECCCTTSC--SSEEEEECTTSCEEEEET-
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEE-c--CCcEEEEccCccCC--CCcEEEEeccccEEEEec-
Confidence            589999999999999975  999999999886     4454 3  47899999998763  357899999999999996 


Q ss_pred             CceEEeecCCCCccceEEEEecCCCEEEEeCcCCCCCceeeeeccCCCC
Q 037760          105 RSTIWSSNSSRVLETAVVRLLDSGNLVLRDNVSRSSDEYMWQSFDYPSD  153 (471)
Q Consensus       105 ~~~vWss~~~~~~~~~~~~Lld~GNlvl~~~~~~~~~~~~WqSFd~PTD  153 (471)
                      +.++|++.+........++|+|+|||||++.    .+.++|||+.||++
T Consensus        68 ~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~----~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 SRAIWASNTNRQNGNYYLILQRDRNVVIYDN----SNNAIWATHTNVGN  112 (112)
T ss_dssp             TEEEEECCCCCSCCCCEEEECTTSCEEEECT----TSCEEEECCCCCCC
T ss_pred             CCeEEEEeeccCCCceEEEEcCCCCEEEECC----CCcEEecCCCccCC
Confidence            5678888776554457899999999999987    56799999999975
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure