Citrus Sinensis ID: 037807

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MYLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSHIPSTRWPEANICQC
ccccccEEEEEEEEEEEEccccccEEEEEEccccccEEEEcccEEEEcccccHHHHHHHHHHccccccccEEEEEcccccHHHHHHHccccccEEEEEEccHHHHHHHHHHcHHHHcccccccEEEEEccHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHccccccEEcccEECccccccHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHccccHHHHHHHccccccccccccccccc
*YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSH*****WP*ANICQC
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MYLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSHIPSTRWPEANICQC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Spermidine synthase 1 probableQ9ZUB3
Spermidine synthase 1 probableQ9SMB1
Spermidine synthase Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor.probableQ1CLX1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.16Spermidine synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1XJ5, chain A
Confidence level:very confident
Coverage over the Query: 3-283
View the alignment between query and template
View the model in PyMOL