Citrus Sinensis ID: 037930


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
ELGPTENYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKSWR
cccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccccEEEEEEEccccHHHHHHHHHcccccHHHHHHHcccHHHHHHHHHHccccEEEcccEEcccEEEEEccEEHHHHHHHHHHcHHHHccccccccEEcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHccccccccccEEEcccHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccc
ccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHccccEEEEEEEcccccccccccccEEEEEEEEccHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHccccEEEccEEEcccEEEEEEEEEHHHHHHHHHcccHEEHHccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccEEEEcccHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccEEEEcccHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
elgptenykksencirykdgiiyltpslrmenDKKAELASFlkvippvefccvygsslhpnnkdksAMVDYVlgvsdpqqwhsenlkMNADHYALWLRLLGGAKLITQVAdeigvgvhfnpfvtwNDRLLKYGVVRMDDLISDILNWKRFYlsgrlqkpvqiladnldignanSVNLRSALSAALLllpskftqeDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLrfssygnhqanvsqdcgvSVTFSLvsslpptiksemgmklgenktvnesGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKSWR
elgptenykksencirykdGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPptiksemgmklgenktvnesgrvVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKSWR
ELGPTENYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGnansvnlrsalsaallllPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKSWR
************NCIRYKDGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNN*DKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSL***********************VVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGK**********
***********************************AELASFLKVIPPVEFCCVYGSSLHPN*K*KSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTIKSEMGMKL*********************DKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKS**
ELGPTENYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKK*********
*L**TENYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKSWR
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ELGPTENYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAGGVNAARYLGKKMEKAWKSWR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query361 2.2.26 [Sep-21-2011]
Q32L81335 Mitochondrial translocato yes no 0.825 0.889 0.360 7e-49
Q3TUH1337 Mitochondrial translocato yes no 0.831 0.890 0.338 2e-47
Q3B7H2338 Mitochondrial translocato yes no 0.775 0.828 0.366 4e-46
Q96BW9316 Mitochondrial translocato yes no 0.673 0.768 0.384 3e-45
Q6DJM2338 Mitochondrial translocato N/A no 0.825 0.881 0.336 1e-41
O74339393 Mitochondrial translocato yes no 0.831 0.763 0.294 7e-37
Q9N4G7321 Mitochondrial translocato yes no 0.867 0.975 0.336 7e-34
Q8INF2342 Mitochondrial translocato yes no 0.806 0.850 0.331 9e-33
Q550P4427 Mitochondrial translocato yes no 0.842 0.711 0.298 4e-32
Q61X59321 Mitochondrial translocato N/A no 0.869 0.978 0.319 7e-32
>sp|Q32L81|TAM41_BOVIN Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Bos taurus GN=TAMM41 PE=2 SV=1 Back     alignment and function desciption
 Score =  194 bits (494), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 180/322 (55%), Gaps = 24/322 (7%)

Query: 48  VEFCCVYGSSLH----PNNKDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGA 103
           +     YGS ++    P++  K+AM+D+V  V DP  WHS+NLK N +HY+ +L++LG  
Sbjct: 24  LSLAFAYGSGVYRQAGPSSDQKNAMLDFVFTVDDP--WHSKNLKRNWNHYS-FLKVLG-P 79

Query: 104 KLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQIL 163
           ++IT V +  G GV++N  +T + RL+KYGV+    LI D+LNW   Y++GRLQKPV+I+
Sbjct: 80  RIITAVQNNYGAGVYYNTLITCDGRLIKYGVISTSVLIEDLLNWNNLYIAGRLQKPVKIV 139

Query: 164 ADNLDIG--NANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGDLRMLFAEDKNKV 221
           A N D+   +A   NL+SA++AA L+LP  F++EDLF ++  LSY GD RM+  EDK KV
Sbjct: 140 AMNEDVALRSALDQNLKSAVTAAFLMLPESFSEEDLFTEIAGLSYSGDFRMVVGEDKAKV 199

Query: 222 KKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSVTFSLVSSLPPTI 281
             IV+     F+ +Y  ++QE           Y   Q ++  D      F+ + +LP T+
Sbjct: 200 LNIVKPNMAHFRELYGSILQESPQ------VVYKAQQGSLEIDKSPEGQFTQLMTLPKTL 253

Query: 282 KSEMGMKL---GENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLL 338
           + ++   +   G+N+ V E+   V+             ++  L   V  SS RQ+  G+ 
Sbjct: 254 QQQINHIMDPPGKNRDVEETLLQVAH-----DPDCGDVVRLGLAAIVRPSSMRQSTKGIF 308

Query: 339 AAGGVNAARYLGKKMEKAWKSW 360
            AG   +  Y   K+ K WK W
Sbjct: 309 TAGLKKSVVYSSLKLHKMWKGW 330




May be involved in the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
Bos taurus (taxid: 9913)
>sp|Q3TUH1|TAM41_MOUSE Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Mus musculus GN=Tamm41 PE=1 SV=2 Back     alignment and function description
>sp|Q3B7H2|TAM41_DANRE Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Danio rerio GN=tamm41 PE=2 SV=1 Back     alignment and function description
>sp|Q96BW9|TAM41_HUMAN Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Homo sapiens GN=TAMM41 PE=2 SV=1 Back     alignment and function description
>sp|Q6DJM2|TAM41_XENLA Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Xenopus laevis GN=tamm41 PE=2 SV=1 Back     alignment and function description
>sp|O74339|TAM41_SCHPO Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tam41 PE=1 SV=3 Back     alignment and function description
>sp|Q9N4G7|TAM41_CAEEL Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Caenorhabditis elegans GN=Y71F9B.2 PE=3 SV=2 Back     alignment and function description
>sp|Q8INF2|TAM41_DROME Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Drosophila melanogaster GN=CG33331 PE=2 SV=1 Back     alignment and function description
>sp|Q550P4|TAM41_DICDI Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0277049 PE=3 SV=1 Back     alignment and function description
>sp|Q61X59|TAM41_CAEBR Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Caenorhabditis briggsae GN=CBG04116 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
225423593332 PREDICTED: mitochondrial translocator as 0.916 0.996 0.746 1e-147
255574468329 conserved hypothetical protein [Ricinus 0.911 1.0 0.757 1e-142
449433483334 PREDICTED: mitochondrial translocator as 0.919 0.994 0.658 1e-132
79314581332 uncharacterized protein [Arabidopsis tha 0.914 0.993 0.687 1e-131
449519918335 PREDICTED: mitochondrial translocator as 0.919 0.991 0.662 1e-131
297819374332 hypothetical protein ARALYDRAFT_485127 [ 0.914 0.993 0.681 1e-129
358348544331 MMP37-like protein [Medicago truncatula] 0.916 1.0 0.659 1e-125
356512235325 PREDICTED: mitochondrial translocator as 0.891 0.990 0.656 1e-123
255647535325 unknown [Glycine max] 0.891 0.990 0.656 1e-123
356528146325 PREDICTED: mitochondrial translocator as 0.889 0.987 0.661 1e-122
>gi|225423593|ref|XP_002275625.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Vitis vinifera] gi|297738029|emb|CBI27230.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 247/331 (74%), Positives = 287/331 (86%)

Query: 30  MENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMN 89
           ME +KKAELAS LK +PPVEFCCVYGS+LHPNN +KS MVDY+LGVSDP QWHS+NLKMN
Sbjct: 1   MEKEKKAELASLLKFLPPVEFCCVYGSALHPNNYNKSTMVDYILGVSDPMQWHSQNLKMN 60

Query: 90  ADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKR 149
            DHYA  +  LGGAKLITQVADEIGVGVHFNPFV+ ND + KYGVVRM DL+ D+LNW+ 
Sbjct: 61  RDHYASSMVYLGGAKLITQVADEIGVGVHFNPFVSVNDEMFKYGVVRMHDLVEDVLNWET 120

Query: 150 FYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGD 209
           FYLSGRLQKPVQ+L DNLDIGN NSVNL+ A+SAALLLLP+KFT+E L+AK+CSLSYMGD
Sbjct: 121 FYLSGRLQKPVQVLVDNLDIGNLNSVNLKGAISAALLLLPAKFTEEHLYAKICSLSYMGD 180

Query: 210 LRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSV 269
           LRMLFAED+NKVKKIVQ QFDLF++MY PL++EY AK  LRFSS   HQA +SQDCG+SV
Sbjct: 181 LRMLFAEDRNKVKKIVQVQFDLFQTMYKPLLEEYGAKGLLRFSSSDGHQAIISQDCGLSV 240

Query: 270 TFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISS 329
             SLVSSLP  ++S+MGMKLGE   ++ESGRV+ EV+V SR++AA+C++ VLRRKVM+SS
Sbjct: 241 ARSLVSSLPSKVRSQMGMKLGEKTKLSESGRVLREVVVGSREEAAECMRGVLRRKVMVSS 300

Query: 330 ARQAVSGLLAAGGVNAARYLGKKMEKAWKSW 360
           ARQAVSGL+A GGVNA RYL  KMEKAWKSW
Sbjct: 301 ARQAVSGLVAVGGVNAIRYLANKMEKAWKSW 331




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574468|ref|XP_002528146.1| conserved hypothetical protein [Ricinus communis] gi|223532444|gb|EEF34237.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|449433483|ref|XP_004134527.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|79314581|ref|NP_001030827.1| uncharacterized protein [Arabidopsis thaliana] gi|6522546|emb|CAB61989.1| putative protein [Arabidopsis thaliana] gi|44681360|gb|AAS47620.1| At3g47630 [Arabidopsis thaliana] gi|56381935|gb|AAV85686.1| At3g47630 [Arabidopsis thaliana] gi|110738628|dbj|BAF01239.1| hypothetical protein [Arabidopsis thaliana] gi|332644789|gb|AEE78310.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449519918|ref|XP_004166981.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|297819374|ref|XP_002877570.1| hypothetical protein ARALYDRAFT_485127 [Arabidopsis lyrata subsp. lyrata] gi|297323408|gb|EFH53829.1| hypothetical protein ARALYDRAFT_485127 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|358348544|ref|XP_003638305.1| MMP37-like protein [Medicago truncatula] gi|355504240|gb|AES85443.1| MMP37-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356512235|ref|XP_003524826.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Glycine max] Back     alignment and taxonomy information
>gi|255647535|gb|ACU24231.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356528146|ref|XP_003532666.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
TAIR|locus:2079207332 AT3G47630 "AT3G47630" [Arabido 0.914 0.993 0.648 2.7e-116
UNIPROTKB|F1SQA3337 TAMM41 "Uncharacterized protei 0.814 0.872 0.335 1.9e-42
UNIPROTKB|Q32L81335 TAMM41 "Mitochondrial transloc 0.808 0.871 0.341 4e-42
ASPGD|ASPL0000061801535 AN0716 [Emericella nidulans (t 0.606 0.409 0.375 5.4e-42
ZFIN|ZDB-GENE-051030-99338 tamm41 "TAM41, mitochondrial t 0.781 0.834 0.342 6.6e-42
MGI|MGI:1916221337 Tamm41 "TAM41, mitochondrial t 0.814 0.872 0.319 2.8e-41
UNIPROTKB|Q96BW9316 TAMM41 "Mitochondrial transloc 0.659 0.753 0.356 4.1e-41
RGD|1586150337 Tamm41 "TAM41, mitochondrial t 0.814 0.872 0.325 4.2e-40
UNIPROTKB|G4N333537 MGG_04909 "Mitochondrial impor 0.498 0.335 0.387 1e-39
UNIPROTKB|Q6DJM2338 tamm41 "Mitochondrial transloc 0.806 0.860 0.307 5.1e-35
TAIR|locus:2079207 AT3G47630 "AT3G47630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 214/330 (64%), Positives = 256/330 (77%)

Query:    30 MENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMN 89
             ME  +K EL+SFL V+PPV+FCCVYGS+LHPNN+DKS MVDY+LGVSDP +WHS NLKMN
Sbjct:     1 METTQKDELSSFLSVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPIKWHSANLKMN 60

Query:    90 ADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKR 149
             +DHYA W+  LGGA+LIT VAD++GVGVHFNPFV WNDR LKYGVVRM DL+ DIL+WKR
Sbjct:    61 SDHYASWMVHLGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWKR 120

Query:   150 FYLSGRLQKPVQILADNLDIGXXXXXXXXXXXXXXXXXXPSKFTQEDLFAKVCSLSYMGD 209
             FYLSGRLQKPV +L DNLDI                   PSKFT+EDL+AK+CSLSYMGD
Sbjct:   121 FYLSGRLQKPVHMLVDNLDIEDVNSVNKRAAISAALLLLPSKFTEEDLYAKICSLSYMGD 180

Query:   210 LRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSV 269
             LRM FAED NKV KIV+GQFDLF+SMY P ++E E K  LRFSS       + QD  +S 
Sbjct:   181 LRMFFAEDTNKVNKIVKGQFDLFQSMYKPFLEECETKNLLRFSSAEASHTKLVQDSSLSA 240

Query:   270 TFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISS 329
             T SLVSSLP +++S+MG  LGE K V+E+GRV+ EV + SR++AAKC++ V+RR+VM+SS
Sbjct:   241 TRSLVSSLPASVRSQMGKSLGEKKFVSETGRVMGEVCISSREEAAKCMEKVMRRRVMVSS 300

Query:   330 ARQAVSGLLAAGGVNAARYLGKKMEKAWKS 359
              RQAVSG LAAG +NA  YL +KM KAW S
Sbjct:   301 GRQAVSGFLAAGAINATMYLSQKMRKAWNS 330




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
UNIPROTKB|F1SQA3 TAMM41 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q32L81 TAMM41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ASPGD|ASPL0000061801 AN0716 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-051030-99 tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1916221 Tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q96BW9 TAMM41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1586150 Tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G4N333 MGG_04909 "Mitochondrial import protein mmp37" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DJM2 tamm41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9N4G7TAM41_CAEELNo assigned EC number0.33630.86700.9750yesno
Q3TUH1TAM41_MOUSENo assigned EC number0.33850.83100.8902yesno
Q32L81TAM41_BOVINNo assigned EC number0.36020.82540.8895yesno
Q8INF2TAM41_DROMENo assigned EC number0.33120.80600.8508yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00030104001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (332 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
pfam09139324 pfam09139, Mmp37, Mitochondrial matrix Mmp37 1e-123
>gnl|CDD|220124 pfam09139, Mmp37, Mitochondrial matrix Mmp37 Back     alignment and domain information
 Score =  357 bits (917), Expect = e-123
 Identities = 125/331 (37%), Positives = 178/331 (53%), Gaps = 19/331 (5%)

Query: 37  ELASFLKVIP-PVEFCCVYGSSLHPNNK---------DKSAMVDYVLGVSDPQQWHSENL 86
           EL   L   P P+ +   YGS + P             K  M+D++ GV DPQ WHS NL
Sbjct: 1   ELRQILSQFPAPISYAFAYGSGVFPQAGYSKSENAQDGKKKMIDFIFGVDDPQHWHSLNL 60

Query: 87  KMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILN 146
           K N DHY+  LRLLG  K I++V +  G GV+FNP V  N RL+KYGVV M+ L+ D+L+
Sbjct: 61  KQNPDHYSS-LRLLG-PKAISKVQENFGAGVYFNPLVNINGRLIKYGVVSMETLLKDLLD 118

Query: 147 WKRFYLSGRLQKPVQIL-ADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLS 205
           W   YL+GRLQKPV++L  D+  I  AN  NL+SAL+AALLLLP  FT+  L+  +  LS
Sbjct: 119 WDTLYLAGRLQKPVKVLKPDDPRIRLANQYNLKSALTAALLLLPESFTEFQLYHTIAGLS 178

Query: 206 YMGDLRM-LFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQD 264
           YMGD RM L  E+ NKV  IV+G F  F+ +Y P++++     F      G     + QD
Sbjct: 179 YMGDFRMKLGGENPNKVNNIVKGNFANFRRLYKPILEDLPNVNFNSQ---GISNVKLEQD 235

Query: 265 CGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRK 324
                  +L+  LP + + ++  +        + G  +  +   S     K +Q  +R+ 
Sbjct: 236 MSPEARGNLLRRLPKSFRQQLYKRYQTKGRNRDGGEFIKRIA--SDPDLRKNVQKAIRKI 293

Query: 325 VMISSARQAVSGLLAAGGVNAARYLGKKMEK 355
           +  SS  Q + G+  AG   + +Y   K+ K
Sbjct: 294 IRWSSLTQTIKGIFTAGITKSVKYSWAKLLK 324


MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane. It has been shown that MMP37 proteins possess the NTase fold but they have only one active site carboxylate and thus probably are not able to carry out enzymatic reaction. These potentially non-active members of NTase fold superfamily may bind ATP, hydrolysis of which is necessary for the translocation of proteins through the membrane. Length = 324

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 361
PF09139330 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR01 100.0
KOG2986313 consensus Uncharacterized conserved protein [Funct 100.0
>PF09139 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR015222 MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane [] Back     alignment and domain information
Probab=100.00  E-value=4.3e-113  Score=837.28  Aligned_cols=315  Identities=44%  Similarity=0.767  Sum_probs=292.3

Q ss_pred             HHHHHHhcCC-CceEEEEecceeccCCCC---------CCCceEEEEecCCcchHHHHHhhcCccchHHHHHhcccchhh
Q 037930           37 ELASFLKVIP-PVEFCCVYGSSLHPNNKD---------KSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLI  106 (361)
Q Consensus        37 ~l~~il~~~~-pi~~afaYGSgVf~q~~~---------~~~miDfI~~V~d~~~wH~~NL~~Np~HYs~~l~~lG~~~~I  106 (361)
                      +|++|++.|| ||+||||||||||+|.+.         +++||||||+|+||.+||++||+|||+|||+ |++|| +++|
T Consensus         1 ~l~~il~~f~~pi~~afAYGSGVf~Q~g~~~~~~~~~~~~~miD~I~~V~~~~~wH~~Nl~~np~HYs~-l~~lG-~~~i   78 (330)
T PF09139_consen    1 ELRRILSSFPAPIRYAFAYGSGVFPQAGYDAPTSSQKSKKPMIDFIFAVDDPQHWHSENLQQNPSHYSF-LRYLG-SRAI   78 (330)
T ss_pred             ChHHHHHhCCCCceEEEEecccccccCCCcccccccCCCCCceEEEEecCChHHHHHHHHHhChhhhhH-HHhcC-hHHH
Confidence            3789999997 599999999999999766         5789999999999999999999999999984 99999 8999


Q ss_pred             HHHhhhcCCceeecceeecCCeeeEEeeeeHHHHHHHHhccccchhhccccccccccc-CChhHHHHHHHHHHHHHHHHH
Q 037930          107 TQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILA-DNLDIGNANSVNLRSALSAAL  185 (361)
Q Consensus       107 ~~vQ~~~gagVyfN~~v~~~g~~iKYGVis~~~l~~DL~~W~~lYlaGRlqKPV~il~-~~~~i~~a~~~NL~sAl~~AL  185 (361)
                      +++|+++||||||||+|+++|++|||||||++||++||.+|++|||||||||||+++. +|++|+.|++.||++|+++||
T Consensus        79 ~~~q~~~gagvyfN~~v~~~~~~iKYGVis~~~l~~DL~~W~~lYlaGRl~KPV~~l~~~~~~~~~a~~~Nl~sA~~~AL  158 (330)
T PF09139_consen   79 SKVQERFGAGVYFNPFVPWNGRLIKYGVISTDDLCRDLLNWNSLYLAGRLQKPVKILRNDDPRLRLANQYNLRSALRAAL  158 (330)
T ss_pred             HHHHhhcCCCeeeeccEEeCCceEEEEEeEHHHHHHHHHhcchhhhcccccCCeeeccCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999 888999999999999999999


Q ss_pred             HcCCCCCCHHHHHHHHHcCccCCcccc-ccccChhhhhhhccccHHHHHHhhHHHHHHhhhhhhhcc---ccCCCCcceE
Q 037930          186 LLLPSKFTQEDLFAKVCSLSYMGDLRM-LFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRF---SSYGNHQANV  261 (361)
Q Consensus       186 LlLP~~Fte~~Ly~~I~~LSY~GD~RM-~~gEn~~Kv~nIV~~~~~~Fr~LY~p~l~~~~~~~~~~~---~~~~~~~~~~  261 (361)
                      |||||+|||+|||++||||||+||||| ++||||+||.|||++|+++||+||.|+|+++....+...   ...++.+.+|
T Consensus       159 LlLPe~FtE~~Ly~~Ia~LSY~GD~RM~~~gEn~~KV~nIV~~q~~~Fr~LY~p~l~~~~~~~~~~~~~~~~~~~~~~~~  238 (330)
T PF09139_consen  159 LLLPESFTEEDLYETIASLSYMGDFRMAIFGENPNKVRNIVSGQLDNFRELYSPLLQELPNVVYLGSSVWTSDDSGNGTF  238 (330)
T ss_pred             HhCCcccCHHHHHHHHhccccccccccccCccCHHHHHHHHhccHHHHHHHHHHHHHhcccceeccccccCCCccccceE
Confidence            999999999999999999999999999 569999999999999999999999999999987655433   1234467899


Q ss_pred             EecCChhHHHHHHhcCChhHHHHHhhhhcCCCccccchhhHHHHHHhChhHHHHHHHHHHhhhcccchHHHHHhhhhccC
Q 037930          262 SQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAG  341 (361)
Q Consensus       262 ~QD~s~~~~~~ll~~LP~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~iV~~sS~~QslKGilTAG  341 (361)
                      +||+||+++.+|++.||++++++|+..++.+...++.++++.. + +.++++++.|+++|++||++||++||+|||+|||
T Consensus       239 ~qd~s~~~~~~~l~~LP~~~~~~l~~~~~~~~~~~d~~~~~~~-i-a~d~~~~~~v~~aI~~IV~~SS~~QSlKGilTAG  316 (330)
T PF09139_consen  239 EQDKSPSARAHLLRRLPKTLRSRLYRQYDRKGRNRDGEEFLRA-I-ASDPDLREVVRRAIRRIVRRSSLRQSLKGILTAG  316 (330)
T ss_pred             EeCCCHHHHHHHHHHCCHHHHHHHHHHhccCCCccchhHHHHH-H-hcChhHHHHHHHHHHhHhhhhhHHHHHhhhhhcC
Confidence            9999999999999999999999999998887766777776644 3 3556899999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHH
Q 037930          342 GVNAARYLGKKMEK  355 (361)
Q Consensus       342 ~~KS~~Y~~~Kl~K  355 (361)
                      ++||++|+++|+.|
T Consensus       317 ~~KSvrYa~~Kl~K  330 (330)
T PF09139_consen  317 PVKSVRYAWAKLSK  330 (330)
T ss_pred             hHHHHHHHHHHhcC
Confidence            99999999999987



>KOG2986 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 8e-05
 Identities = 49/383 (12%), Positives = 121/383 (31%), Gaps = 70/383 (18%)

Query: 7   NYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLK-VIPPVEFCCVYGSSLHPNNKDK 65
           +++  E+  +YKD +     +     D K ++    K ++   E   +  S    +    
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCK-DVQDMPKSILSKEEIDHIIMS---KDAVSG 63

Query: 66  SAMVDYVL---GVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPF 122
           +  + + L        Q++  E L++N   Y  +L     + + T+      +   +   
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRIN---YK-FLM----SPIKTEQRQPSMMTRMYIEQ 115

Query: 123 V--TWND--RLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDI------GNA 172
               +ND     KY V R+   +             +L++ +  L    ++      G+ 
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYL-------------KLRQALLELRPAKNVLIDGVLGSG 162

Query: 173 NSVNLRSALSAALLLLPSKFTQEDLFAKV--CSLSYMGDLRMLFAEDKNKVKKIVQGQFD 230
            +  +     A  + L  K  Q  +  K+   +L        +    +  + +I      
Sbjct: 163 KTW-V-----ALDVCLSYKV-QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 231 LFKSMYNPLIQEYEAKEFLR--FSSYGNHQA-----NVSQDCGVSVTFS-----LVSSLP 278
                 N  ++ +  +  LR    S           NV Q+      F+     L+++  
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNAKAWNAFNLSCKILLTTRF 274

Query: 279 PTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLL 338
             +   +      + +++     ++       D+    L   L  +      R+ ++   
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTP------DEVKSLLLKYLDCRPQ-DLPREVLTTNP 327

Query: 339 AAGGVNAARYLGKKMEKAWKSWR 361
               + A     +     W +W+
Sbjct: 328 RRLSIIAESI--RDGLATWDNWK 348


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query361
3jz0_A287 Lincosamide nucleotidyltransferase; alpha-beta str 89.49
>3jz0_A Lincosamide nucleotidyltransferase; alpha-beta structure, transferase-antibiotic CO; HET: APC CLY; 2.00A {Enterococcus faecium} PDB: 3jyy_A* Back     alignment and structure
Probab=89.49  E-value=0.5  Score=45.19  Aligned_cols=96  Identities=17%  Similarity=0.226  Sum_probs=64.7

Q ss_pred             HHHHHHHHh---cCCCceEEEEecceeccCCCCCCCceEEEEecCC--cchHHHHHhhcCccchHHHHHhcccchhhHHH
Q 037930           35 KAELASFLK---VIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSD--PQQWHSENLKMNADHYALWLRLLGGAKLITQV  109 (361)
Q Consensus        35 ~~~l~~il~---~~~pi~~afaYGSgVf~q~~~~~~miDfI~~V~d--~~~wH~~NL~~Np~HYs~~l~~lG~~~~I~~v  109 (361)
                      ++.+..|++   ..+.|++++.|||=+... .+.-.-+||+++|+|  ...|-  +      +  .|+..+| +..+. +
T Consensus        25 ~e~l~~I~~~~~~d~~i~av~l~GS~~~~~-~D~~SD~Di~~vV~~~~~~~f~--~------~--~Wl~~fG-~~~~~-f   91 (287)
T 3jz0_A           25 KELIANVKNLTESDERITACMMYGSFTKGE-GDQYSDIEFYIFLKHSITSNFD--S------S--NWLFDVA-PYLML-Y   91 (287)
T ss_dssp             HHHHHHHHHHHHHCTTEEEEEECSGGGTTC-CCTTCCEEEEEEECGGGTTTCC--H------H--HHHHHHC-CEEEE-E
T ss_pred             HHHHHHHHHHHhcCCCEEEEEEECCccCCC-CCCccceeEEEEEcCcchhhhh--h------H--HHHHHhh-hhheE-e
Confidence            445666665   457899999999999865 566678999999998  55552  1      2  4899999 66553 2


Q ss_pred             hhhcCCceeecceeecCCeeeEEeeeeHHHHHHHHhccc
Q 037930          110 ADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWK  148 (361)
Q Consensus       110 Q~~~gagVyfN~~v~~~g~~iKYGVis~~~l~~DL~~W~  148 (361)
                      ...+|   |+ -..-.||.+|-.-+++.+++ ..+..|.
T Consensus        92 ~~~~~---~~-l~lF~Dg~riDl~l~~~~~l-~~~~~~~  125 (287)
T 3jz0_A           92 KNEYG---TE-VVIFDNLIRGEFHFLSEKDM-NIIPSFK  125 (287)
T ss_dssp             ECTTS---CE-EEEETTSCEEEEEEEEGGGG-GGGGGGG
T ss_pred             ecccc---eE-EEEecCCcEEEEEEeeHHHH-HHHhccc
Confidence            21121   22 11123789999999999986 4445554




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query361
d2pbea2135 Aminoglycoside 6-adenylyltransferase AadK {Bacillu 91.49
d1no5a_100 Hypothetical protein HI0073 {Haemophilus influenza 80.22
>d2pbea2 d.218.1.13 (A:1-135) Aminoglycoside 6-adenylyltransferase AadK {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: AadK N-terminal domain-like
domain: Aminoglycoside 6-adenylyltransferase AadK
species: Bacillus subtilis [TaxId: 1423]
Probab=91.49  E-value=0.16  Score=41.58  Aligned_cols=104  Identities=15%  Similarity=0.212  Sum_probs=61.0

Q ss_pred             HHHHHHHHh---cCCCceEEEEecceeccCC-CCCCCceEEEEecCCcchHHHHHhhcCccchHHHHHhcccchhhHHHh
Q 037930           35 KAELASFLK---VIPPVEFCCVYGSSLHPNN-KDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVA  110 (361)
Q Consensus        35 ~~~l~~il~---~~~pi~~afaYGSgVf~q~-~~~~~miDfI~~V~d~~~wH~~NL~~Np~HYs~~l~~lG~~~~I~~vQ  110 (361)
                      ++.+..|++   ..+.|++++--||-+.+.. .+.-.=+|+++.|+|+..+-+       +|.  |+..|| ...+  +|
T Consensus         5 ~eml~~I~~~a~~d~~I~Av~L~GSRan~~~~~D~fsD~Div~~v~d~~~f~~-------~~~--Wl~~fG-~~l~--~q   72 (135)
T d2pbea2           5 QEMMDIFLDFALNDERIRLVTLEGSRTNRNIPPDNFQDYDISYFVTDVESFKE-------NDQ--WLEIFG-KRIM--MQ   72 (135)
T ss_dssp             HHHHHHHHHHHHHCTTEEEEEEC------------CCCEEEEEEESCHHHHHT-------CSG--GGGGGC-CEEE--EE
T ss_pred             HHHHHHHHHHHhcCCCEEEEEEecccCCCCCCCCCCcceeEEEEecCchHhhh-------CHH--HHHHhC-chhh--eE
Confidence            456666666   3578999999999888753 232368999999999987751       233  688899 5543  33


Q ss_pred             hhcCCceeecce---------eecCCeeeEEeeeeHHHHHHHHhccccch
Q 037930          111 DEIGVGVHFNPF---------VTWNDRLLKYGVVRMDDLISDILNWKRFY  151 (361)
Q Consensus       111 ~~~gagVyfN~~---------v~~~g~~iKYGVis~~~l~~DL~~W~~lY  151 (361)
                      . .....+|++.         +-.+|.+|-.-.++.+++.+=+.+|+.+|
T Consensus        73 ~-pe~~~~~~~~~~~~~~~l~lfeDG~rIDl~l~~~~~l~~~~~~~d~l~  121 (135)
T d2pbea2          73 K-PEDMELFPPELGNWFSYIILFEDGNKLDLTLIPIREAEDYFANNDGLV  121 (135)
T ss_dssp             C-TTSCSSSCCCSTTCEEEEEEETTSCEEEEEEEEGGGHHHHHHC-----
T ss_pred             c-cccccccCcccCCceEEEEEecCCcEEEEEEeCHHHHHHHHhccCCce
Confidence            2 2222333322         12288999999999999888788887654



>d1no5a_ d.218.1.5 (A:) Hypothetical protein HI0073 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure