Citrus Sinensis ID: 037930
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 361 | ||||||
| 225423593 | 332 | PREDICTED: mitochondrial translocator as | 0.916 | 0.996 | 0.746 | 1e-147 | |
| 255574468 | 329 | conserved hypothetical protein [Ricinus | 0.911 | 1.0 | 0.757 | 1e-142 | |
| 449433483 | 334 | PREDICTED: mitochondrial translocator as | 0.919 | 0.994 | 0.658 | 1e-132 | |
| 79314581 | 332 | uncharacterized protein [Arabidopsis tha | 0.914 | 0.993 | 0.687 | 1e-131 | |
| 449519918 | 335 | PREDICTED: mitochondrial translocator as | 0.919 | 0.991 | 0.662 | 1e-131 | |
| 297819374 | 332 | hypothetical protein ARALYDRAFT_485127 [ | 0.914 | 0.993 | 0.681 | 1e-129 | |
| 358348544 | 331 | MMP37-like protein [Medicago truncatula] | 0.916 | 1.0 | 0.659 | 1e-125 | |
| 356512235 | 325 | PREDICTED: mitochondrial translocator as | 0.891 | 0.990 | 0.656 | 1e-123 | |
| 255647535 | 325 | unknown [Glycine max] | 0.891 | 0.990 | 0.656 | 1e-123 | |
| 356528146 | 325 | PREDICTED: mitochondrial translocator as | 0.889 | 0.987 | 0.661 | 1e-122 |
| >gi|225423593|ref|XP_002275625.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Vitis vinifera] gi|297738029|emb|CBI27230.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/331 (74%), Positives = 287/331 (86%)
Query: 30 MENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMN 89
ME +KKAELAS LK +PPVEFCCVYGS+LHPNN +KS MVDY+LGVSDP QWHS+NLKMN
Sbjct: 1 MEKEKKAELASLLKFLPPVEFCCVYGSALHPNNYNKSTMVDYILGVSDPMQWHSQNLKMN 60
Query: 90 ADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKR 149
DHYA + LGGAKLITQVADEIGVGVHFNPFV+ ND + KYGVVRM DL+ D+LNW+
Sbjct: 61 RDHYASSMVYLGGAKLITQVADEIGVGVHFNPFVSVNDEMFKYGVVRMHDLVEDVLNWET 120
Query: 150 FYLSGRLQKPVQILADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLSYMGD 209
FYLSGRLQKPVQ+L DNLDIGN NSVNL+ A+SAALLLLP+KFT+E L+AK+CSLSYMGD
Sbjct: 121 FYLSGRLQKPVQVLVDNLDIGNLNSVNLKGAISAALLLLPAKFTEEHLYAKICSLSYMGD 180
Query: 210 LRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSV 269
LRMLFAED+NKVKKIVQ QFDLF++MY PL++EY AK LRFSS HQA +SQDCG+SV
Sbjct: 181 LRMLFAEDRNKVKKIVQVQFDLFQTMYKPLLEEYGAKGLLRFSSSDGHQAIISQDCGLSV 240
Query: 270 TFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISS 329
SLVSSLP ++S+MGMKLGE ++ESGRV+ EV+V SR++AA+C++ VLRRKVM+SS
Sbjct: 241 ARSLVSSLPSKVRSQMGMKLGEKTKLSESGRVLREVVVGSREEAAECMRGVLRRKVMVSS 300
Query: 330 ARQAVSGLLAAGGVNAARYLGKKMEKAWKSW 360
ARQAVSGL+A GGVNA RYL KMEKAWKSW
Sbjct: 301 ARQAVSGLVAVGGVNAIRYLANKMEKAWKSW 331
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574468|ref|XP_002528146.1| conserved hypothetical protein [Ricinus communis] gi|223532444|gb|EEF34237.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449433483|ref|XP_004134527.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|79314581|ref|NP_001030827.1| uncharacterized protein [Arabidopsis thaliana] gi|6522546|emb|CAB61989.1| putative protein [Arabidopsis thaliana] gi|44681360|gb|AAS47620.1| At3g47630 [Arabidopsis thaliana] gi|56381935|gb|AAV85686.1| At3g47630 [Arabidopsis thaliana] gi|110738628|dbj|BAF01239.1| hypothetical protein [Arabidopsis thaliana] gi|332644789|gb|AEE78310.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449519918|ref|XP_004166981.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297819374|ref|XP_002877570.1| hypothetical protein ARALYDRAFT_485127 [Arabidopsis lyrata subsp. lyrata] gi|297323408|gb|EFH53829.1| hypothetical protein ARALYDRAFT_485127 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|358348544|ref|XP_003638305.1| MMP37-like protein [Medicago truncatula] gi|355504240|gb|AES85443.1| MMP37-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356512235|ref|XP_003524826.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255647535|gb|ACU24231.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356528146|ref|XP_003532666.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 361 | ||||||
| TAIR|locus:2079207 | 332 | AT3G47630 "AT3G47630" [Arabido | 0.914 | 0.993 | 0.648 | 2.7e-116 | |
| UNIPROTKB|F1SQA3 | 337 | TAMM41 "Uncharacterized protei | 0.814 | 0.872 | 0.335 | 1.9e-42 | |
| UNIPROTKB|Q32L81 | 335 | TAMM41 "Mitochondrial transloc | 0.808 | 0.871 | 0.341 | 4e-42 | |
| ASPGD|ASPL0000061801 | 535 | AN0716 [Emericella nidulans (t | 0.606 | 0.409 | 0.375 | 5.4e-42 | |
| ZFIN|ZDB-GENE-051030-99 | 338 | tamm41 "TAM41, mitochondrial t | 0.781 | 0.834 | 0.342 | 6.6e-42 | |
| MGI|MGI:1916221 | 337 | Tamm41 "TAM41, mitochondrial t | 0.814 | 0.872 | 0.319 | 2.8e-41 | |
| UNIPROTKB|Q96BW9 | 316 | TAMM41 "Mitochondrial transloc | 0.659 | 0.753 | 0.356 | 4.1e-41 | |
| RGD|1586150 | 337 | Tamm41 "TAM41, mitochondrial t | 0.814 | 0.872 | 0.325 | 4.2e-40 | |
| UNIPROTKB|G4N333 | 537 | MGG_04909 "Mitochondrial impor | 0.498 | 0.335 | 0.387 | 1e-39 | |
| UNIPROTKB|Q6DJM2 | 338 | tamm41 "Mitochondrial transloc | 0.806 | 0.860 | 0.307 | 5.1e-35 |
| TAIR|locus:2079207 AT3G47630 "AT3G47630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
Identities = 214/330 (64%), Positives = 256/330 (77%)
Query: 30 MENDKKAELASFLKVIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSDPQQWHSENLKMN 89
ME +K EL+SFL V+PPV+FCCVYGS+LHPNN+DKS MVDY+LGVSDP +WHS NLKMN
Sbjct: 1 METTQKDELSSFLSVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPIKWHSANLKMN 60
Query: 90 ADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKR 149
+DHYA W+ LGGA+LIT VAD++GVGVHFNPFV WNDR LKYGVVRM DL+ DIL+WKR
Sbjct: 61 SDHYASWMVHLGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWKR 120
Query: 150 FYLSGRLQKPVQILADNLDIGXXXXXXXXXXXXXXXXXXPSKFTQEDLFAKVCSLSYMGD 209
FYLSGRLQKPV +L DNLDI PSKFT+EDL+AK+CSLSYMGD
Sbjct: 121 FYLSGRLQKPVHMLVDNLDIEDVNSVNKRAAISAALLLLPSKFTEEDLYAKICSLSYMGD 180
Query: 210 LRMLFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQDCGVSV 269
LRM FAED NKV KIV+GQFDLF+SMY P ++E E K LRFSS + QD +S
Sbjct: 181 LRMFFAEDTNKVNKIVKGQFDLFQSMYKPFLEECETKNLLRFSSAEASHTKLVQDSSLSA 240
Query: 270 TFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISS 329
T SLVSSLP +++S+MG LGE K V+E+GRV+ EV + SR++AAKC++ V+RR+VM+SS
Sbjct: 241 TRSLVSSLPASVRSQMGKSLGEKKFVSETGRVMGEVCISSREEAAKCMEKVMRRRVMVSS 300
Query: 330 ARQAVSGLLAAGGVNAARYLGKKMEKAWKS 359
RQAVSG LAAG +NA YL +KM KAW S
Sbjct: 301 GRQAVSGFLAAGAINATMYLSQKMRKAWNS 330
|
|
| UNIPROTKB|F1SQA3 TAMM41 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q32L81 TAMM41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000061801 AN0716 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-051030-99 tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1916221 Tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96BW9 TAMM41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|1586150 Tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4N333 MGG_04909 "Mitochondrial import protein mmp37" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6DJM2 tamm41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00030104001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (332 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 361 | |||
| pfam09139 | 324 | pfam09139, Mmp37, Mitochondrial matrix Mmp37 | 1e-123 |
| >gnl|CDD|220124 pfam09139, Mmp37, Mitochondrial matrix Mmp37 | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-123
Identities = 125/331 (37%), Positives = 178/331 (53%), Gaps = 19/331 (5%)
Query: 37 ELASFLKVIP-PVEFCCVYGSSLHPNNK---------DKSAMVDYVLGVSDPQQWHSENL 86
EL L P P+ + YGS + P K M+D++ GV DPQ WHS NL
Sbjct: 1 ELRQILSQFPAPISYAFAYGSGVFPQAGYSKSENAQDGKKKMIDFIFGVDDPQHWHSLNL 60
Query: 87 KMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILN 146
K N DHY+ LRLLG K I++V + G GV+FNP V N RL+KYGVV M+ L+ D+L+
Sbjct: 61 KQNPDHYSS-LRLLG-PKAISKVQENFGAGVYFNPLVNINGRLIKYGVVSMETLLKDLLD 118
Query: 147 WKRFYLSGRLQKPVQIL-ADNLDIGNANSVNLRSALSAALLLLPSKFTQEDLFAKVCSLS 205
W YL+GRLQKPV++L D+ I AN NL+SAL+AALLLLP FT+ L+ + LS
Sbjct: 119 WDTLYLAGRLQKPVKVLKPDDPRIRLANQYNLKSALTAALLLLPESFTEFQLYHTIAGLS 178
Query: 206 YMGDLRM-LFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRFSSYGNHQANVSQD 264
YMGD RM L E+ NKV IV+G F F+ +Y P++++ F G + QD
Sbjct: 179 YMGDFRMKLGGENPNKVNNIVKGNFANFRRLYKPILEDLPNVNFNSQ---GISNVKLEQD 235
Query: 265 CGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRK 324
+L+ LP + + ++ + + G + + S K +Q +R+
Sbjct: 236 MSPEARGNLLRRLPKSFRQQLYKRYQTKGRNRDGGEFIKRIA--SDPDLRKNVQKAIRKI 293
Query: 325 VMISSARQAVSGLLAAGGVNAARYLGKKMEK 355
+ SS Q + G+ AG + +Y K+ K
Sbjct: 294 IRWSSLTQTIKGIFTAGITKSVKYSWAKLLK 324
|
MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane. It has been shown that MMP37 proteins possess the NTase fold but they have only one active site carboxylate and thus probably are not able to carry out enzymatic reaction. These potentially non-active members of NTase fold superfamily may bind ATP, hydrolysis of which is necessary for the translocation of proteins through the membrane. Length = 324 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 361 | |||
| PF09139 | 330 | Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR01 | 100.0 | |
| KOG2986 | 313 | consensus Uncharacterized conserved protein [Funct | 100.0 |
| >PF09139 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR015222 MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-113 Score=837.28 Aligned_cols=315 Identities=44% Similarity=0.767 Sum_probs=292.3
Q ss_pred HHHHHHhcCC-CceEEEEecceeccCCCC---------CCCceEEEEecCCcchHHHHHhhcCccchHHHHHhcccchhh
Q 037930 37 ELASFLKVIP-PVEFCCVYGSSLHPNNKD---------KSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLI 106 (361)
Q Consensus 37 ~l~~il~~~~-pi~~afaYGSgVf~q~~~---------~~~miDfI~~V~d~~~wH~~NL~~Np~HYs~~l~~lG~~~~I 106 (361)
+|++|++.|| ||+||||||||||+|.+. +++||||||+|+||.+||++||+|||+|||+ |++|| +++|
T Consensus 1 ~l~~il~~f~~pi~~afAYGSGVf~Q~g~~~~~~~~~~~~~miD~I~~V~~~~~wH~~Nl~~np~HYs~-l~~lG-~~~i 78 (330)
T PF09139_consen 1 ELRRILSSFPAPIRYAFAYGSGVFPQAGYDAPTSSQKSKKPMIDFIFAVDDPQHWHSENLQQNPSHYSF-LRYLG-SRAI 78 (330)
T ss_pred ChHHHHHhCCCCceEEEEecccccccCCCcccccccCCCCCceEEEEecCChHHHHHHHHHhChhhhhH-HHhcC-hHHH
Confidence 3789999997 599999999999999766 5789999999999999999999999999984 99999 8999
Q ss_pred HHHhhhcCCceeecceeecCCeeeEEeeeeHHHHHHHHhccccchhhccccccccccc-CChhHHHHHHHHHHHHHHHHH
Q 037930 107 TQVADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILA-DNLDIGNANSVNLRSALSAAL 185 (361)
Q Consensus 107 ~~vQ~~~gagVyfN~~v~~~g~~iKYGVis~~~l~~DL~~W~~lYlaGRlqKPV~il~-~~~~i~~a~~~NL~sAl~~AL 185 (361)
+++|+++||||||||+|+++|++|||||||++||++||.+|++|||||||||||+++. +|++|+.|++.||++|+++||
T Consensus 79 ~~~q~~~gagvyfN~~v~~~~~~iKYGVis~~~l~~DL~~W~~lYlaGRl~KPV~~l~~~~~~~~~a~~~Nl~sA~~~AL 158 (330)
T PF09139_consen 79 SKVQERFGAGVYFNPFVPWNGRLIKYGVISTDDLCRDLLNWNSLYLAGRLQKPVKILRNDDPRLRLANQYNLRSALRAAL 158 (330)
T ss_pred HHHHhhcCCCeeeeccEEeCCceEEEEEeEHHHHHHHHHhcchhhhcccccCCeeeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 888999999999999999999
Q ss_pred HcCCCCCCHHHHHHHHHcCccCCcccc-ccccChhhhhhhccccHHHHHHhhHHHHHHhhhhhhhcc---ccCCCCcceE
Q 037930 186 LLLPSKFTQEDLFAKVCSLSYMGDLRM-LFAEDKNKVKKIVQGQFDLFKSMYNPLIQEYEAKEFLRF---SSYGNHQANV 261 (361)
Q Consensus 186 LlLP~~Fte~~Ly~~I~~LSY~GD~RM-~~gEn~~Kv~nIV~~~~~~Fr~LY~p~l~~~~~~~~~~~---~~~~~~~~~~ 261 (361)
|||||+|||+|||++||||||+||||| ++||||+||.|||++|+++||+||.|+|+++....+... ...++.+.+|
T Consensus 159 LlLPe~FtE~~Ly~~Ia~LSY~GD~RM~~~gEn~~KV~nIV~~q~~~Fr~LY~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 238 (330)
T PF09139_consen 159 LLLPESFTEEDLYETIASLSYMGDFRMAIFGENPNKVRNIVSGQLDNFRELYSPLLQELPNVVYLGSSVWTSDDSGNGTF 238 (330)
T ss_pred HhCCcccCHHHHHHHHhccccccccccccCccCHHHHHHHHhccHHHHHHHHHHHHHhcccceeccccccCCCccccceE
Confidence 999999999999999999999999999 569999999999999999999999999999987655433 1234467899
Q ss_pred EecCChhHHHHHHhcCChhHHHHHhhhhcCCCccccchhhHHHHHHhChhHHHHHHHHHHhhhcccchHHHHHhhhhccC
Q 037930 262 SQDCGVSVTFSLVSSLPPTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLLAAG 341 (361)
Q Consensus 262 ~QD~s~~~~~~ll~~LP~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~iV~~sS~~QslKGilTAG 341 (361)
+||+||+++.+|++.||++++++|+..++.+...++.++++.. + +.++++++.|+++|++||++||++||+|||+|||
T Consensus 239 ~qd~s~~~~~~~l~~LP~~~~~~l~~~~~~~~~~~d~~~~~~~-i-a~d~~~~~~v~~aI~~IV~~SS~~QSlKGilTAG 316 (330)
T PF09139_consen 239 EQDKSPSARAHLLRRLPKTLRSRLYRQYDRKGRNRDGEEFLRA-I-ASDPDLREVVRRAIRRIVRRSSLRQSLKGILTAG 316 (330)
T ss_pred EeCCCHHHHHHHHHHCCHHHHHHHHHHhccCCCccchhHHHHH-H-hcChhHHHHHHHHHHhHhhhhhHHHHHhhhhhcC
Confidence 9999999999999999999999999998887766777776644 3 3556899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHH
Q 037930 342 GVNAARYLGKKMEK 355 (361)
Q Consensus 342 ~~KS~~Y~~~Kl~K 355 (361)
++||++|+++|+.|
T Consensus 317 ~~KSvrYa~~Kl~K 330 (330)
T PF09139_consen 317 PVKSVRYAWAKLSK 330 (330)
T ss_pred hHHHHHHHHHHhcC
Confidence 99999999999987
|
|
| >KOG2986 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 361 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 8e-05
Identities = 49/383 (12%), Positives = 121/383 (31%), Gaps = 70/383 (18%)
Query: 7 NYKKSENCIRYKDGIIYLTPSLRMENDKKAELASFLK-VIPPVEFCCVYGSSLHPNNKDK 65
+++ E+ +YKD + + D K ++ K ++ E + S +
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCK-DVQDMPKSILSKEEIDHIIMS---KDAVSG 63
Query: 66 SAMVDYVL---GVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVADEIGVGVHFNPF 122
+ + + L Q++ E L++N Y +L + + T+ + +
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRIN---YK-FLM----SPIKTEQRQPSMMTRMYIEQ 115
Query: 123 V--TWND--RLLKYGVVRMDDLISDILNWKRFYLSGRLQKPVQILADNLDI------GNA 172
+ND KY V R+ + +L++ + L ++ G+
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYL-------------KLRQALLELRPAKNVLIDGVLGSG 162
Query: 173 NSVNLRSALSAALLLLPSKFTQEDLFAKV--CSLSYMGDLRMLFAEDKNKVKKIVQGQFD 230
+ + A + L K Q + K+ +L + + + +I
Sbjct: 163 KTW-V-----ALDVCLSYKV-QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215
Query: 231 LFKSMYNPLIQEYEAKEFLR--FSSYGNHQA-----NVSQDCGVSVTFS-----LVSSLP 278
N ++ + + LR S NV Q+ F+ L+++
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNAKAWNAFNLSCKILLTTRF 274
Query: 279 PTIKSEMGMKLGENKTVNESGRVVSEVIVRSRDKAAKCLQNVLRRKVMISSARQAVSGLL 338
+ + + +++ ++ D+ L L + R+ ++
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTP------DEVKSLLLKYLDCRPQ-DLPREVLTTNP 327
Query: 339 AAGGVNAARYLGKKMEKAWKSWR 361
+ A + W +W+
Sbjct: 328 RRLSIIAESI--RDGLATWDNWK 348
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 361 | |||
| 3jz0_A | 287 | Lincosamide nucleotidyltransferase; alpha-beta str | 89.49 |
| >3jz0_A Lincosamide nucleotidyltransferase; alpha-beta structure, transferase-antibiotic CO; HET: APC CLY; 2.00A {Enterococcus faecium} PDB: 3jyy_A* | Back alignment and structure |
|---|
Probab=89.49 E-value=0.5 Score=45.19 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=64.7
Q ss_pred HHHHHHHHh---cCCCceEEEEecceeccCCCCCCCceEEEEecCC--cchHHHHHhhcCccchHHHHHhcccchhhHHH
Q 037930 35 KAELASFLK---VIPPVEFCCVYGSSLHPNNKDKSAMVDYVLGVSD--PQQWHSENLKMNADHYALWLRLLGGAKLITQV 109 (361)
Q Consensus 35 ~~~l~~il~---~~~pi~~afaYGSgVf~q~~~~~~miDfI~~V~d--~~~wH~~NL~~Np~HYs~~l~~lG~~~~I~~v 109 (361)
++.+..|++ ..+.|++++.|||=+... .+.-.-+||+++|+| ...|- + + .|+..+| +..+. +
T Consensus 25 ~e~l~~I~~~~~~d~~i~av~l~GS~~~~~-~D~~SD~Di~~vV~~~~~~~f~--~------~--~Wl~~fG-~~~~~-f 91 (287)
T 3jz0_A 25 KELIANVKNLTESDERITACMMYGSFTKGE-GDQYSDIEFYIFLKHSITSNFD--S------S--NWLFDVA-PYLML-Y 91 (287)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEECSGGGTTC-CCTTCCEEEEEEECGGGTTTCC--H------H--HHHHHHC-CEEEE-E
T ss_pred HHHHHHHHHHHhcCCCEEEEEEECCccCCC-CCCccceeEEEEEcCcchhhhh--h------H--HHHHHhh-hhheE-e
Confidence 445666665 457899999999999865 566678999999998 55552 1 2 4899999 66553 2
Q ss_pred hhhcCCceeecceeecCCeeeEEeeeeHHHHHHHHhccc
Q 037930 110 ADEIGVGVHFNPFVTWNDRLLKYGVVRMDDLISDILNWK 148 (361)
Q Consensus 110 Q~~~gagVyfN~~v~~~g~~iKYGVis~~~l~~DL~~W~ 148 (361)
...+| |+ -..-.||.+|-.-+++.+++ ..+..|.
T Consensus 92 ~~~~~---~~-l~lF~Dg~riDl~l~~~~~l-~~~~~~~ 125 (287)
T 3jz0_A 92 KNEYG---TE-VVIFDNLIRGEFHFLSEKDM-NIIPSFK 125 (287)
T ss_dssp ECTTS---CE-EEEETTSCEEEEEEEEGGGG-GGGGGGG
T ss_pred ecccc---eE-EEEecCCcEEEEEEeeHHHH-HHHhccc
Confidence 21121 22 11123789999999999986 4445554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 361 | |||
| d2pbea2 | 135 | Aminoglycoside 6-adenylyltransferase AadK {Bacillu | 91.49 | |
| d1no5a_ | 100 | Hypothetical protein HI0073 {Haemophilus influenza | 80.22 |
| >d2pbea2 d.218.1.13 (A:1-135) Aminoglycoside 6-adenylyltransferase AadK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nucleotidyltransferase superfamily: Nucleotidyltransferase family: AadK N-terminal domain-like domain: Aminoglycoside 6-adenylyltransferase AadK species: Bacillus subtilis [TaxId: 1423]
Probab=91.49 E-value=0.16 Score=41.58 Aligned_cols=104 Identities=15% Similarity=0.212 Sum_probs=61.0
Q ss_pred HHHHHHHHh---cCCCceEEEEecceeccCC-CCCCCceEEEEecCCcchHHHHHhhcCccchHHHHHhcccchhhHHHh
Q 037930 35 KAELASFLK---VIPPVEFCCVYGSSLHPNN-KDKSAMVDYVLGVSDPQQWHSENLKMNADHYALWLRLLGGAKLITQVA 110 (361)
Q Consensus 35 ~~~l~~il~---~~~pi~~afaYGSgVf~q~-~~~~~miDfI~~V~d~~~wH~~NL~~Np~HYs~~l~~lG~~~~I~~vQ 110 (361)
++.+..|++ ..+.|++++--||-+.+.. .+.-.=+|+++.|+|+..+-+ +|. |+..|| ...+ +|
T Consensus 5 ~eml~~I~~~a~~d~~I~Av~L~GSRan~~~~~D~fsD~Div~~v~d~~~f~~-------~~~--Wl~~fG-~~l~--~q 72 (135)
T d2pbea2 5 QEMMDIFLDFALNDERIRLVTLEGSRTNRNIPPDNFQDYDISYFVTDVESFKE-------NDQ--WLEIFG-KRIM--MQ 72 (135)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEC------------CCCEEEEEEESCHHHHHT-------CSG--GGGGGC-CEEE--EE
T ss_pred HHHHHHHHHHHhcCCCEEEEEEecccCCCCCCCCCCcceeEEEEecCchHhhh-------CHH--HHHHhC-chhh--eE
Confidence 456666666 3578999999999888753 232368999999999987751 233 688899 5543 33
Q ss_pred hhcCCceeecce---------eecCCeeeEEeeeeHHHHHHHHhccccch
Q 037930 111 DEIGVGVHFNPF---------VTWNDRLLKYGVVRMDDLISDILNWKRFY 151 (361)
Q Consensus 111 ~~~gagVyfN~~---------v~~~g~~iKYGVis~~~l~~DL~~W~~lY 151 (361)
. .....+|++. +-.+|.+|-.-.++.+++.+=+.+|+.+|
T Consensus 73 ~-pe~~~~~~~~~~~~~~~l~lfeDG~rIDl~l~~~~~l~~~~~~~d~l~ 121 (135)
T d2pbea2 73 K-PEDMELFPPELGNWFSYIILFEDGNKLDLTLIPIREAEDYFANNDGLV 121 (135)
T ss_dssp C-TTSCSSSCCCSTTCEEEEEEETTSCEEEEEEEEGGGHHHHHHC-----
T ss_pred c-cccccccCcccCCceEEEEEecCCcEEEEEEeCHHHHHHHHhccCCce
Confidence 2 2222333322 12288999999999999888788887654
|
| >d1no5a_ d.218.1.5 (A:) Hypothetical protein HI0073 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|