Citrus Sinensis ID: 038182

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
MQSPSTVQMTIISLFLIFTLSLSRKAFLASAGKDPPPRFELIHRHSPQLSEHEATAYSPPKNLSERIRQLIDGDIARQEMISRRLEDRRRRGRIRKASEISHHRTFNGTSNIVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKMISSLYLL
cccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccCEEECcccccccccccEEEEEECcccccCEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEEEEEEEcccccEEEc
********MTIISLFLIFTLSLSRKAFLA************IHR***********************RQLIDGDIARQEMI*************************************SGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCP*********MFH***SSTFKTIPCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKMISSLYLL
xxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQSPSTVQMTIISLFLIFTLSLSRKAFLASAGKDPPPRFELIHRHSPQLSEHEATAYSPPKNLSERIRQLIDGDIARQEMISRRLEDRRRRGRIRKASEISHHRTFNGTSNIVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKMISSLYLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VLA, chain A
Confidence level:confident
Coverage over the Query: 110-164,179-236
View the alignment between query and template
View the model in PyMOL