Citrus Sinensis ID: 038358

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MTNNTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDASATSSCSASVSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPVDDDSASSSYSSGLTLDLRLGL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccEccccccccccccccccccHcccccccccccccccccccccccHHHHHcccccccccHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEccccccccccccHcccccccccccccccEccccccccccHccccccccccccEEccccc
Coil and Loop (DISEMBL)
mtnntssdpdfffspspthriitnfasssspdahyqQSACKKRSKLikidasatsscsasvskpkyakkpdpgapkitrpcsecgkkFWSWKALfghmrchperqwrginpppnfrrpaspvkevtsvenvmtvEDHEVAACLLMLANgdvgvgtgsfqqgiqvqdtnevnlggvscrfecnsckkvfgshqalgghrashkhvkgcfaitrssdgceidhdhcsdgivkenVDDERKMMMVLGHKCSICLRVfssgqalgghkrchwekgddpllndglnlldlnlpapvdddsasssyssgltldlrlgl
Flexible Loop (DISEMBL)
mtnntssdpdfffSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDasatsscsasvskpkyakkpdpgapkitrpcsECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPApvdddsasssyssgltldlrlgl
Low Complexity Region (SEG)
MTNNTssdpdfffspspTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDasatsscsasvsKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGddpllndglnlldlnlpapvdddsasssyssGLTLDLRLGL
Disordered region (IsUnstruct)
*******************************************************************************PCSECGKKFWSWKALFGHMRCHPERQWRGI****************TSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNL*************************
Disordered Region (DISOPRED)
************************************************************************************GKKFWS******************I****************************************************************************************************************************************KCSICLRVFSSGQALGGHK*******************DLNL*****************TLDLRLGL
Disordered Region (DISEMBL)
*********DFFFSPSPTHRIITNFAS**********************************************APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSH***********HVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPV**************LDLRLGL
Disordered Region (DISPRO)
**************************************************************************PKITRPCSECGKKFWSWKALFGHMRCH********************************VEDHEVAACLLMLANG*************************VSCRFECNSCKKVFGSHQALG***********************************************LGHKCSICLRVFSSGQAL*GHKRCHWE*********GLNLLDLNLPAPVD************T******L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTNNTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDASATSSCSASVSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPVDDDSASSSYSSGLTLDLRLGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
O65499	284	Zinc finger protein ZAT3	yes	no	0.858	0.943	0.496	1e-70
Q9SIJ0	270	Zinc finger protein ZAT2	no	no	0.865	1.0	0.448	6e-62
Q9M202	288	Zinc finger protein ZAT9	no	no	0.480	0.520	0.335	1e-18
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.464	0.461	0.331	4e-17
Q39092	267	Zinc finger protein ZAT1	no	no	0.477	0.558	0.338	2e-16
Q9SSW2	273	Zinc finger protein AZF2	no	no	0.407	0.465	0.384	2e-15
O22533	238	Zinc finger protein ZAT6	no	no	0.400	0.525	0.343	3e-13
Q681X4	286	Zinc finger protein ZAT5	no	no	0.487	0.531	0.315	7e-12
Q9SSW1	245	Zinc finger protein AZF1	no	no	0.407	0.518	0.328	1e-10
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.339	0.595	0.333	2e-10

>sp|O65499|ZAT3_ARATH Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=2 SV=1

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 163/328 (49%), Positives = 197/328 (60%), Gaps = 60/328 (18%)

Query: 1   MTNNTSSDPDFF---FSPSPTHRIITN--FASSSSPDAHYQQSACKKRSKLIKIDASATS 55
           M NN S D   F     PS T     N  FA SSS    Y  S  KKR+K +   +S++ 
Sbjct: 1   MNNNHSYDDRSFHIPLHPSNTSNPNPNLQFALSSS----YDHSPKKKRTKTVASSSSSSP 56

Query: 56  SCSASVSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF 115
             ++      Y KKPDP APKITRPC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN+
Sbjct: 57  KSASKPK---YTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNY 113

Query: 116 RRP-ASPVKEVTSV----ENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEV 170
           R P A+  K++  +     + M+ EDHEVA+CLLML+NG     +               
Sbjct: 114 RVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLSNGTPSSSSIE------------- 160

Query: 171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD-----GCEIDHDHCS 225
                  RFEC  CKKVFGSHQALGGHRASHK+VKGCFAIT  +D          HDH  
Sbjct: 161 -------RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDH-- 211

Query: 226 DGIVKENVDDERKMMMVLG-HKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLD 284
                     + K++   G HKC+IC RVFSSGQALGGH RCHWEK ++P+++     LD
Sbjct: 212 ----------QGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPMISGA---LD 258

Query: 285 LNLPAPVDDDSASSSYSSGLTLDLRLGL 312
           LN+P  + D   S+S +SG  LDLRLGL
Sbjct: 259 LNVPPTIQD--LSTSDTSGCCLDLRLGL 284

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIJ0|ZAT2_ARATH Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=2 SV=1

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 187/312 (59%), Gaps = 42/312 (13%)

Query: 1   MTNNTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDASATSSCSAS 60
           M+N ++SDP+   S  P       FASS+     Y Q+  +KR+KL   +  ++    +S
Sbjct: 1   MSNTSNSDPN---SDIP-------FASSNVTLPSYNQNPRRKRTKLTNNEVGSS----SS 46

Query: 61  VSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPAS 120
             +PK   +PDP A +I RPC+ECGK+F S KALFGHMRCHPERQWRGINPP NF+R  +
Sbjct: 47  SPRPKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRIN 106

Query: 121 PVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFE 180
                +S     + E+H +A+CLLM+ANGDV   +   ++                 RFE
Sbjct: 107 SNAASSSSSWDPSEEEHNIASCLLMMANGDVPTRSSEVEE-----------------RFE 149

Query: 181 CNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMM 240
           C+ CKKVFGSHQALGGHRA+HK VKGCFA   + +  E         IV ++     K++
Sbjct: 150 CDGCKKVFGSHQALGGHRATHKDVKGCFA---NKNITEDPPPPPPQEIVDQDKGKSVKLV 206

Query: 241 MVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPVDDDSASSSY 300
             + H+C+IC RVFSSGQALGGH RCHWEK  +    + +  +DLN+PA     + SS  
Sbjct: 207 SGMNHRCNICSRVFSSGQALGGHMRCHWEKDQE---ENQVRGIDLNVPA-----ATSSDT 258

Query: 301 SSGLTLDLRLGL 312
           + G +LDLRLGL
Sbjct: 259 TLGCSLDLRLGL 270

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 29/179 (16%)

Query: 133 TVEDHEVAACLLMLA------NGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKK 186
           T  + ++A CL+ML+      N          +   + +  N++N      R++C +C K
Sbjct: 121 TTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGK 180

Query: 187 VFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHK 246
           VF S+QALGGHRASHK  K   +  ++    E ++D+    +V + +           H+
Sbjct: 181 VFKSYQALGGHRASHK--KNRVSNNKTEQRSETEYDNVV--VVAKRI-----------HE 225

Query: 247 CSICLRVFSSGQALGGHKRCH------WEKGDDPLLNDGLN--LLDLNLPAPVDDDSAS 297
           C ICLRVF+SGQALGGHKR H        +      N+ +   ++DLNLPAP ++D  S
Sbjct: 226 CPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMIDLNLPAPTEEDEVS 284

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 39/184 (21%)

Query: 133 TVEDHEVAACLLMLANGDVGVGTGS---FQQGIQVQDTNEVNLGGVSCRFECNSCKKVFG 189
           T  + ++A CL+ML+              ++     D+ +        RF+C +C KVF 
Sbjct: 145 TTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVFK 204

Query: 190 SHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSI 249
           S+QALGGHRASHK  K C   T      +++ ++   G+ ++ V           H+C I
Sbjct: 205 SYQALGGHRASHKKNKACMTKTE-----QVETEYVL-GVKEKKV-----------HECPI 247

Query: 250 CLRVFSSGQALGGHKRCHWEKGDDPLLNDGLN----------------LLDLNLPAPVDD 293
           C RVF+SGQALGGHKR H   G +     GL+                ++DLNLPAP ++
Sbjct: 248 CFRVFTSGQALGGHKRSH---GSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEE 304

Query: 294 DSAS 297
           D  S
Sbjct: 305 DETS 308

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 28/177 (15%)

Query: 125 VTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC 184
           ++SV +  T E+ +VA  L++L+            +    +  N+         FEC +C
Sbjct: 115 MSSVSDAATTEE-DVALSLMLLSRDKWEKEEEESDEERWKKKRNKW--------FECETC 165

Query: 185 KKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG 244
           +KVF S+QALGGHRASHK      A T              D +  + +  ++K      
Sbjct: 166 EKVFKSYQALGGHRASHKKK---IAET--------------DQLGSDELKKKKKKSTSSH 208

Query: 245 HKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDG--LNLLDLNLPAPVDDDSASSS 299
           H+C IC +VF+SGQALGGHKR H    ++     G  ++L+DLNLPAP +++  +SS
Sbjct: 209 HECPICAKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAPSEEEEMASS 265

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana GN=AZF2 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 16/143 (11%)

Query: 129 ENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVF 188
           +N    E+  +A CLLMLA  D    T   QQ   +    E      +  ++CN C+K F
Sbjct: 61  QNQDLTEEEYLALCLLMLAK-DQPSQTRFHQQSQSLTPPPESK----NLPYKCNVCEKAF 115

Query: 189 GSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG--HK 246
            S+QALGGH+ASH+ +K    I+ ++D         S       V  E+  +   G  H+
Sbjct: 116 PSYQALGGHKASHR-IKPPTVISTTADD--------STAPTISIVAGEKHPIAASGKIHE 166

Query: 247 CSICLRVFSSGQALGGHKRCHWE 269
           CSIC +VF +GQALGGHKRCH+E
Sbjct: 167 CSICHKVFPTGQALGGHKRCHYE 189

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

Arabidopsis thaliana (taxid: 3702)

>sp|O22533|ZAT6_ARATH Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 12/137 (8%)

Query: 134 VEDHEVAACLLMLA-NGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQ 192
            ED  +A CL++LA +GD                +  +     +  ++C+ C K F S+Q
Sbjct: 47  TEDEYIALCLMLLARDGD----RNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQ 102

Query: 193 ALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLR 252
           ALGGH+ASH+     F++T+S+ G E+     +   +  +         V  H CSIC +
Sbjct: 103 ALGGHKASHRK---SFSLTQSAGGDELS----TSSAITTSGISGGGGGSVKSHVCSICHK 155

Query: 253 VFSSGQALGGHKRCHWE 269
            F++GQALGGHKRCH+E
Sbjct: 156 SFATGQALGGHKRCHYE 172

Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis. Probably acts as a repressor of primary root growth and regulates Pi homeostasis through the control of root architecture.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 89/203 (43%), Gaps = 51/203 (25%)

Query: 133 TVEDHEVAACLLMLANGDVG-----VGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKV 187
           T E+ ++A CL+MLA G V        +    Q I  ++++          +EC +C + 
Sbjct: 71  TQEEEDMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFY-------VYECKTCNRT 123

Query: 188 FGSHQALGGHRASHK------HVKGCFAIT--RSSDGCEIDHDH---CSDGIVKENVDDE 236
           F S QALGGHRASHK        K    +T  +SS   E  + H       +  +  +  
Sbjct: 124 FSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNII 183

Query: 237 RKMMMVLGHKCSICLRVFSSGQALGGHKRCHW------------------EKGDDPLLND 278
            K   V  H+CSIC   F+SGQALGGH R H                      ++  +N 
Sbjct: 184 NKANKV--HECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINI 241

Query: 279 GLNL--------LDLNLPAPVDD 293
           G ++        LDLNLPAP DD
Sbjct: 242 GRSMEQQRKYLPLDLNLPAPEDD 264

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 10/137 (7%)

Query: 135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQAL 194
           E+  +A CLLMLA G             +   ++  +       ++C  C K F S+QAL
Sbjct: 60  EEEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRD-------YKCTVCGKSFSSYQAL 112

Query: 195 GGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG--HKCSICLR 252
           GGH+ SH+      +IT  +     +    S  +V     +    +   G  H CSIC +
Sbjct: 113 GGHKTSHRKPTNT-SITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFK 171

Query: 253 VFSSGQALGGHKRCHWE 269
            F+SGQALGGHKRCH++
Sbjct: 172 SFASGQALGGHKRCHYD 188

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 29/135 (21%)

Query: 133 TVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQ 192
           ++++ ++A CL++LA   +    G           N+      S +FEC +C K F S Q
Sbjct: 11  SLKNIDIAKCLMILAQTSMVKQIG----------LNQHTESHTSNQFECKTCNKRFSSFQ 60

Query: 193 ALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLR 252
           ALGGHRASHK  K         D   + +D+  +                  HKCSIC +
Sbjct: 61  ALGGHRASHKKPK---LTVEQKDVKHLSNDYKGNHF----------------HKCSICSQ 101

Query: 253 VFSSGQALGGHKRCH 267
            F +GQALGGH R H
Sbjct: 102 SFGTGQALGGHMRRH 116

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
224131872	318	predicted protein [Populus trichocarpa]	0.939	0.921	0.593	5e-99
224104835	297	predicted protein [Populus trichocarpa]	0.894	0.939	0.587	1e-94
225428272	305	PREDICTED: zinc finger protein ZAT3 [Vit	0.910	0.931	0.583	5e-87
255572420	318	hypothetical protein RCOM_0512620 [Ricin	0.830	0.814	0.599	3e-79
147822386	501	hypothetical protein VITISV_002884 [Viti	0.846	0.526	0.541	1e-69
15236937	284	C2H2-like zinc finger protein [Arabidops	0.858	0.943	0.496	7e-69
116831427	285	unknown [Arabidopsis thaliana]	0.858	0.940	0.496	8e-69
297798390	283	zinc finger family protein [Arabidopsis	0.794	0.876	0.486	3e-64
15227385	270	C2H2-like zinc finger protein [Arabidops	0.865	1.0	0.448	3e-60
356499523	237	PREDICTED: zinc finger protein ZAT3-like	0.596	0.784	0.514	2e-52

>gi|224131872|ref|XP_002328129.1| predicted protein [Populus trichocarpa] gi|222837644|gb|EEE76009.1| predicted protein [Populus trichocarpa]

 Score =  367 bits (941), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 200/337 (59%), Positives = 239/337 (70%), Gaps = 44/337 (13%)

Query: 1   MTN-NTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDASATSSCSA 59
           MTN NT  DPDF              +SSS P  +Y Q+  KKR+KLIKI+ S   S  +
Sbjct: 1   MTNHNTDPDPDFGLP-----------SSSSIPTTYYHQNPRKKRTKLIKIEPSLLPS--S 47

Query: 60  SVSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPA 119
           ++SKPKY KKPDP APKITRPC+ECGKKFWSWKALFGHMRCHPERQWRGINPPPN+RRP 
Sbjct: 48  TISKPKYYKKPDPSAPKITRPCTECGKKFWSWKALFGHMRCHPERQWRGINPPPNYRRPV 107

Query: 120 SPVKEVTSV-----ENVMTVEDHEVAACLLMLANGD--VGVGTGSFQQGI------QVQD 166
           SP++ ++ V     E+++T EDHEVA+CLLMLAN D  + +    F  G+      Q +D
Sbjct: 108 SPIQLLSIVSSTNWEDMLTAEDHEVASCLLMLANSDGAIMLDRNEFGGGVVAGSSHQARD 167

Query: 167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSD 226
            ++VN      R EC+SC+KVFGSH ALGG  ASHK+VKGCFAI R +DGCE+  DH   
Sbjct: 168 HDQVNC----TRVECSSCEKVFGSHLALGGRSASHKNVKGCFAIKR-NDGCEVVEDHSGS 222

Query: 227 GIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDD---PLLNDGLN-- 281
           G VKENV+D  K +MVLGH+CSIC RVF SGQALGGHKRCHWEKG++    +   GL+  
Sbjct: 223 GDVKENVEDNSKALMVLGHRCSICSRVFPSGQALGGHKRCHWEKGEEISSSINQGGLHVL 282

Query: 282 ------LLDLNLPAPVDDDSASSSYSSGLTLDLRLGL 312
                 +LDLNLPAPV+D+S SS YSSGLTLDLRLGL
Sbjct: 283 TEKEGSVLDLNLPAPVEDES-SSFYSSGLTLDLRLGL 318

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104835|ref|XP_002313585.1| predicted protein [Populus trichocarpa] gi|222849993|gb|EEE87540.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/327 (58%), Positives = 232/327 (70%), Gaps = 48/327 (14%)

Query: 2   TNNTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDASATSSCSASV 61
           ++NT  DPDF              +SSS P  ++ Q+  KKR++LIKI+ S   S  +++
Sbjct: 3   SHNTDPDPDFCLP-----------SSSSIPTTYHHQNPRKKRTRLIKIEPSLLPS--STI 49

Query: 62  SKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASP 121
           S+PKY  KPDP APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPN+RRP SP
Sbjct: 50  SRPKYYNKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNYRRPVSP 109

Query: 122 VKEVTSV------ENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGV 175
           + +  S+      E++MT EDHEVA+CLLMLA+ D          G  + + N       
Sbjct: 110 IDQPVSIANPTNWEDMMTAEDHEVASCLLMLADSD----------GAAMLEVN------- 152

Query: 176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDD 235
             RFEC+SC+KVFGSHQALGGHRASHK+VKGCFA+TR SDGCE+  DH   G VKENV+D
Sbjct: 153 CTRFECSSCRKVFGSHQALGGHRASHKNVKGCFALTR-SDGCEVVEDHGGSGDVKENVED 211

Query: 236 ERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDD--PLLNDGLNL--------LDL 285
             K ++VLGHKCSICLR+F SGQALGGH RCHWEKG++    +N GL+         LDL
Sbjct: 212 NSKALLVLGHKCSICLRMFPSGQALGGHMRCHWEKGEENSSSMNQGLHFLTAKEGCGLDL 271

Query: 286 NLPAPVDDDSASSSYSSGLTLDLRLGL 312
           NLPAP++D+S+SS  SSGLTLDLRL L
Sbjct: 272 NLPAPMEDESSSSY-SSGLTLDLRLCL 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428272|ref|XP_002279565.1| PREDICTED: zinc finger protein ZAT3 [Vitis vinifera]

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 192/329 (58%), Positives = 221/329 (67%), Gaps = 45/329 (13%)

Query: 4   NTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQ---QSACKKRSKLIKIDASATSSCSAS 60
           N ++D     S +P      N  SS    ++YQ   Q+  KKRSKLI+ID S  +S S+ 
Sbjct: 2   NINTDLIVHTSKNPV-ETFGNLDSSQQSGSNYQIQNQNPRKKRSKLIRIDPSVVAS-SSG 59

Query: 61  VSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPAS 120
           + K K  KK DP APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPN+RR   
Sbjct: 60  IVKAKSGKKADPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNYRRSE- 118

Query: 121 PVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFE 180
             K V   +  M+ +DHEVAACLLMLAN     G G  ++           +      FE
Sbjct: 119 --KGVEDADLGMSEDDHEVAACLLMLAN-----GAGPIER-----------ISHCMLAFE 160

Query: 181 CNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEID----HDHCSDGIVKENVDDE 236
           C+SCKKVFGSHQALGGHRASHK+VKGCFAITR ++G + D    H+   DG VKEN+  E
Sbjct: 161 CSSCKKVFGSHQALGGHRASHKNVKGCFAITR-NEGEDEDRSGGHERDGDGEVKENL--E 217

Query: 237 RKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDP-----LLNDGLNL--------L 283
            KMMMVLGHKCSICLRVFSSGQALGGHKRCHWE+GD+P      L  GLN         L
Sbjct: 218 EKMMMVLGHKCSICLRVFSSGQALGGHKRCHWERGDEPPSSLSSLPQGLNPFAPKAGFGL 277

Query: 284 DLNLPAPVDDDSASSSYSSGLTLDLRLGL 312
           DLNLPAP++DDS   S+SS L LDLRLGL
Sbjct: 278 DLNLPAPLEDDSY-CSHSSNLALDLRLGL 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572420|ref|XP_002527147.1| hypothetical protein RCOM_0512620 [Ricinus communis] gi|223533486|gb|EEF35229.1| hypothetical protein RCOM_0512620 [Ricinus communis]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 184/307 (59%), Positives = 215/307 (70%), Gaps = 48/307 (15%)

Query: 51  ASATSSCSASVSKPKY-AKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGI 109
           A+A+ + S  VSKPKY A+KPDP APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGI
Sbjct: 15  ATASETFSNIVSKPKYYARKPDPSAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGI 74

Query: 110 -NPPPNFRRPASPVKEVTSVEN----VMTVEDHEVAACLLMLANGDVGVGT--------- 155
             PP + R P  P++E+ +VE+    +MT EDHEVAACLL+LAN D    T         
Sbjct: 75  NPPPNHRRPPVPPIQEIGNVEDQVVVMMTAEDHEVAACLLLLANSDHVSSTVLETECGGG 134

Query: 156 --GSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRS 213
             GS   G     +  V    ++CRFEC+SCKKVFGSHQALGGHRASHK+VKGCFAITRS
Sbjct: 135 GEGSGIGGGATCSSFHVQEDAINCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRS 194

Query: 214 SDGCEIDHDHCSDGI----VKENVD----------DERKMMMVLGHKCSICLRVFSSGQA 259
           SDGC++  ++   GI    VKEN++          +  KM+MVLGHKCSICLRVFS+GQA
Sbjct: 195 SDGCDMGEEN--SGIVGVDVKENMEDNHTNTNDNNNNNKMLMVLGHKCSICLRVFSTGQA 252

Query: 260 LGGHKRCHWEKGDDPL----LNDGLNL----------LDLNLPAPVDDDSASSSYSSGLT 305
           LGGHKRCHWEKG++         GLN           LDLNLPAPV+D+S+SS  SSGLT
Sbjct: 253 LGGHKRCHWEKGEEASSSMNYRSGLNSIVYAAKENCGLDLNLPAPVEDESSSSY-SSGLT 311

Query: 306 LDLRLGL 312
           LDLRLGL
Sbjct: 312 LDLRLGL 318

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147822386|emb|CAN59897.1| hypothetical protein VITISV_002884 [Vitis vinifera]

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 168/310 (54%), Positives = 196/310 (63%), Gaps = 46/310 (14%)

Query: 24  NFASSSSPDAHYQ---QSACKKRSKLIKIDASATSSCSASVSKPKYAKKPDPGAPKITRP 80
           N  SS    ++YQ   Q+  KKRSKLI+ID S  +S S  V     AK    G P     
Sbjct: 217 NLDSSQQSGSNYQIQNQNPRKKRSKLIRIDPSVVASSSGIVK----AKSRKEGGP----- 267

Query: 81  CSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVA 140
             EC K   +       ++CHPERQWRGINPPPN+RR     K V   +  M+ +DHEVA
Sbjct: 268 --ECSKDHSA-------VQCHPERQWRGINPPPNYRRSE---KGVEDADLGMSEDDHEVA 315

Query: 141 ACLLMLANGDVGVGTGSF-QQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA 199
           ACLLMLANG   +   S      Q    + ++  G  CRFEC+SCKKVFGSHQALGGHRA
Sbjct: 316 ACLLMLANGAGPIERISHCMLAYQADGADGLDALGGGCRFECSSCKKVFGSHQALGGHRA 375

Query: 200 SHKHVKGCFAITRSSDGCEID----HDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFS 255
           SHK+VKGCFAITR ++G + D    H+   DG VKEN+  E KMMMVLGHKCSICLRVFS
Sbjct: 376 SHKNVKGCFAITR-NEGEDEDRSGGHERDGDGEVKENL--EEKMMMVLGHKCSICLRVFS 432

Query: 256 SGQALGGHKRCHWEKGDDP-----LLNDGLNL--------LDLNLPAPVDDDSASSSYSS 302
           SGQALGGHKRCHWE+GD+P      L  GLN         LDLNLPAP++DDS   S+SS
Sbjct: 433 SGQALGGHKRCHWERGDEPPSSLSSLPQGLNPFAPKAGFGLDLNLPAPLEDDSY-CSHSS 491

Query: 303 GLTLDLRLGL 312
            L LDLRLGL
Sbjct: 492 NLALDLRLGL 501

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236937|ref|NP_195254.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|75318572|sp|O65499.1|ZAT3_ARATH RecName: Full=Zinc finger protein ZAT3; AltName: Full=Protein DUO1-ACTIVATED ZINC FINGER 2 gi|3080422|emb|CAA18741.1| putative zinc-finger protein [Arabidopsis thaliana] gi|7270480|emb|CAB80245.1| putative zinc-finger protein [Arabidopsis thaliana] gi|91806770|gb|ABE66112.1| zinc finger family protein [Arabidopsis thaliana] gi|225898853|dbj|BAH30557.1| hypothetical protein [Arabidopsis thaliana] gi|332661089|gb|AEE86489.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 163/328 (49%), Positives = 197/328 (60%), Gaps = 60/328 (18%)

Query: 1   MTNNTSSDPDFF---FSPSPTHRIITN--FASSSSPDAHYQQSACKKRSKLIKIDASATS 55
           M NN S D   F     PS T     N  FA SSS    Y  S  KKR+K +   +S++ 
Sbjct: 1   MNNNHSYDDRSFHIPLHPSNTSNPNPNLQFALSSS----YDHSPKKKRTKTVASSSSSSP 56

Query: 56  SCSASVSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF 115
             ++      Y KKPDP APKITRPC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN+
Sbjct: 57  KSASKPK---YTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNY 113

Query: 116 RRP-ASPVKEVTSV----ENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEV 170
           R P A+  K++  +     + M+ EDHEVA+CLLML+NG     +               
Sbjct: 114 RVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLSNGTPSSSSIE------------- 160

Query: 171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD-----GCEIDHDHCS 225
                  RFEC  CKKVFGSHQALGGHRASHK+VKGCFAIT  +D          HDH  
Sbjct: 161 -------RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDH-- 211

Query: 226 DGIVKENVDDERKMMMVLG-HKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLD 284
                     + K++   G HKC+IC RVFSSGQALGGH RCHWEK ++P+++     LD
Sbjct: 212 ----------QGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPMISGA---LD 258

Query: 285 LNLPAPVDDDSASSSYSSGLTLDLRLGL 312
           LN+P  + D   S+S +SG  LDLRLGL
Sbjct: 259 LNVPPTIQD--LSTSDTSGCCLDLRLGL 284

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831427|gb|ABK28666.1| unknown [Arabidopsis thaliana]

 Score =  266 bits (680), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 163/328 (49%), Positives = 197/328 (60%), Gaps = 60/328 (18%)

Query: 1   MTNNTSSDPDFF---FSPSPTHRIITN--FASSSSPDAHYQQSACKKRSKLIKIDASATS 55
           M NN S D   F     PS T     N  FA SSS    Y  S  KKR+K +   +S++ 
Sbjct: 1   MNNNHSYDDRSFHIPLHPSNTSNPNPNLQFALSSS----YDHSPKKKRTKTVASSSSSSP 56

Query: 56  SCSASVSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF 115
             ++      Y KKPDP APKITRPC+ECG+KFWSWKALFGHMRCHPERQWRGINPPPN+
Sbjct: 57  KSASKPK---YTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNY 113

Query: 116 RRP-ASPVKEVTSV----ENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEV 170
           R P A+  K++  +     + M+ EDHEVA+CLLML+NG     +               
Sbjct: 114 RVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLSNGTPSSSSIE------------- 160

Query: 171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD-----GCEIDHDHCS 225
                  RFEC  CKKVFGSHQALGGHRASHK+VKGCFAIT  +D          HDH  
Sbjct: 161 -------RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDH-- 211

Query: 226 DGIVKENVDDERKMMMVLGH-KCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLD 284
                     + K++   GH KC+IC RVFSSGQALGGH RCHWEK ++P+++  L   D
Sbjct: 212 ----------QGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPMISGAL---D 258

Query: 285 LNLPAPVDDDSASSSYSSGLTLDLRLGL 312
           LN+P  + D   S+S +SG  LDLRLGL
Sbjct: 259 LNVPPTIQD--LSTSDTSGCCLDLRLGL 284

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798390|ref|XP_002867079.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297312915|gb|EFH43338.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/294 (48%), Positives = 180/294 (61%), Gaps = 46/294 (15%)

Query: 25  FASSSSPDAHYQQSACKKRSKLIKIDASATSSCSASVSKPKYAKKPDPGAPKITRPCSEC 84
           FA SSS    Y+ S  KKR+K +   +S++   ++      Y +KPDP APKITRPC+EC
Sbjct: 30  FALSSS----YEHSPKKKRTKTVASSSSSSPKSASKPK---YTRKPDPNAPKITRPCTEC 82

Query: 85  GKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVE-----NVMTVEDHEV 139
           G++FWSWKALFGHMRCHPERQWRGINPPPN+R   +      +       + M+ EDHEV
Sbjct: 83  GRQFWSWKALFGHMRCHPERQWRGINPPPNYRASTTASSRQLNQRSPNWVSFMSEEDHEV 142

Query: 140 AACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA 199
           A+CLL+L+NG     +                      RFEC  CKKVFGSHQALGGHRA
Sbjct: 143 ASCLLLLSNGTPSSSSSE--------------------RFECGGCKKVFGSHQALGGHRA 182

Query: 200 SHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG-HKCSICLRVFSSGQ 258
           SHK+VKGCFAIT  +D                + D + K++   G HKC+IC RVF SGQ
Sbjct: 183 SHKNVKGCFAITNVTDDPMT-------VTTSSDQDHKAKILTFSGHHKCNICFRVFPSGQ 235

Query: 259 ALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPVDDDSASSSYSSGLTLDLRLGL 312
           ALGGH RCHWE+ ++ +++     LDLN+PA  D    S+S +SG  LDLRLGL
Sbjct: 236 ALGGHMRCHWEREEETMISGA---LDLNVPAIQD---LSTSDTSGCCLDLRLGL 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227385|ref|NP_179309.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|75337267|sp|Q9SIJ0.1|ZAT2_ARATH RecName: Full=Zinc finger protein ZAT2; AltName: Full=Protein DUO1-ACTIVATED ZINC FINGER 1 gi|4584341|gb|AAD25136.1| putative C2H2-type zinc finger protein [Arabidopsis thaliana] gi|67633522|gb|AAY78685.1| zinc finger (C2H2 type) family protein [Arabidopsis thaliana] gi|225898112|dbj|BAH30388.1| hypothetical protein [Arabidopsis thaliana] gi|330251501|gb|AEC06595.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 187/312 (59%), Gaps = 42/312 (13%)

Query: 1   MTNNTSSDPDFFFSPSPTHRIITNFASSSSPDAHYQQSACKKRSKLIKIDASATSSCSAS 60
           M+N ++SDP+   S  P       FASS+     Y Q+  +KR+KL   +  ++    +S
Sbjct: 1   MSNTSNSDPN---SDIP-------FASSNVTLPSYNQNPRRKRTKLTNNEVGSS----SS 46

Query: 61  VSKPKYAKKPDPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPAS 120
             +PK   +PDP A +I RPC+ECGK+F S KALFGHMRCHPERQWRGINPP NF+R  +
Sbjct: 47  SPRPKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRIN 106

Query: 121 PVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFE 180
                +S     + E+H +A+CLLM+ANGDV   +   ++                 RFE
Sbjct: 107 SNAASSSSSWDPSEEEHNIASCLLMMANGDVPTRSSEVEE-----------------RFE 149

Query: 181 CNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMM 240
           C+ CKKVFGSHQALGGHRA+HK VKGCFA   + +  E         IV ++     K++
Sbjct: 150 CDGCKKVFGSHQALGGHRATHKDVKGCFA---NKNITEDPPPPPPQEIVDQDKGKSVKLV 206

Query: 241 MVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPLLNDGLNLLDLNLPAPVDDDSASSSY 300
             + H+C+IC RVFSSGQALGGH RCHWEK  +    + +  +DLN+PA     + SS  
Sbjct: 207 SGMNHRCNICSRVFSSGQALGGHMRCHWEKDQE---ENQVRGIDLNVPA-----ATSSDT 258

Query: 301 SSGLTLDLRLGL 312
           + G +LDLRLGL
Sbjct: 259 TLGCSLDLRLGL 270

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499523|ref|XP_003518589.1| PREDICTED: zinc finger protein ZAT3-like [Glycine max]

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/239 (51%), Positives = 141/239 (58%), Gaps = 53/239 (22%)

Query: 79  RPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHE 138
           RPC+ECGKKFWSWKALFGHMRCHPER WRGINPPPN          V   +  MT EDHE
Sbjct: 47  RPCTECGKKFWSWKALFGHMRCHPERHWRGINPPPN----------VIRRQQQMTQEDHE 96

Query: 139 VAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHR 198
           VAA                    +     ++         FEC+SC KVFGSHQALGGHR
Sbjct: 97  VAA-----------------CLLLLANAKDKDKDKEEDVHFECSSCNKVFGSHQALGGHR 139

Query: 199 ASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQ 258
           ASHK+VKGCFA   +                  +  D+  MM++ GHKCSICLRVFS+GQ
Sbjct: 140 ASHKNVKGCFANNAAIG-------------TSSSTSDQENMMILHGHKCSICLRVFSTGQ 186

Query: 259 ALGGHKRCHWEKGDD-PLLND----GLNLLDLNLPAPVDDDSASSSYSSGLTLDLRLGL 312
           ALGGHKRCHW+KGD+  LL D     L+L+DLN P P        S+SS L LDLRLGL
Sbjct: 187 ALGGHKRCHWDKGDNLGLLADSSSKSLSLVDLNFPPP--------SFSSPLALDLRLGL 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2059672	270	DAZ1 "AT2G17180" [Arabidopsis	0.455	0.525	0.438	3.8e-56
TAIR|locus:2122118	284	DAZ2 "AT4G35280" [Arabidopsis	0.551	0.605	0.550	8.3e-51
TAIR|locus:2205583	324	AT1G02040 "AT1G02040" [Arabido	0.512	0.493	0.435	6.6e-26
TAIR|locus:2103311	288	AT3G60580 "AT3G60580" [Arabido	0.381	0.413	0.366	3.2e-21
TAIR|locus:2156435	493	AT5G56200 "AT5G56200" [Arabido	0.307	0.194	0.396	1.1e-20
TAIR|locus:2091201	273	ZF2 "AT3G19580" [Arabidopsis t	0.439	0.501	0.379	2.5e-17
TAIR|locus:2055583	314	AT2G45120 "AT2G45120" [Arabido	0.25	0.248	0.385	5.1e-16
TAIR|locus:2179964	238	ZAT6 "AT5G04340" [Arabidopsis	0.397	0.521	0.360	9.8e-16
TAIR|locus:2158192	245	ZF1 "AT5G67450" [Arabidopsis t	0.410	0.522	0.35	1.4e-14
TAIR|locus:2083053	215	AT3G49930 "AT3G49930" [Arabido	0.262	0.381	0.408	4.9e-14

TAIR|locus:2059672 DAZ1 "AT2G17180" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
 Identities = 64/146 (43%), Positives = 87/146 (59%)

Query:    25 FASSSSPDAHYQQSACKKRSKLIKIDXXXXXXXXXXXXKPKYAKKPDPGAPKITRPCSEC 84
             FASS+     Y Q+  +KR+KL   +            +PK   +PDP A +I RPC+EC
Sbjct:    15 FASSNVTLPSYNQNPRRKRTKLTNNEVGSSSSSP----RPKPVTQPDPDASQIARPCTEC 70

Query:    85 GKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLL 144
             GK+F S KALFGHMRCHPERQWRGINPP NF+R  +     +S     + E+H +A+CLL
Sbjct:    71 GKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASSSSSWDPSEEEHNIASCLL 130

Query:   145 MLANGDVGVGTGSFQQGIQVQDTNEV 170
             M+ANGDV   +   ++  +     +V
Sbjct:   131 MMANGDVPTRSSEVEERFECDGCKKV 156

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:2122118 DAZ2 "AT4G35280" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 115/209 (55%), Positives = 131/209 (62%)

Query:    25 FASSSSPDAHYQQSACKKRSKLIKIDXXXXXXXXXXXXKPKYAKKPDPGAPKITRPCSEC 84
             FA SSS    Y  S  KKR+K +               KPKY KKPDP APKITRPC+EC
Sbjct:    30 FALSSS----YDHSPKKKRTKTV---ASSSSSSPKSASKPKYTKKPDPNAPKITRPCTEC 82

Query:    85 GKKFWSWKALFGHMRCHPERQWRGINPPPNFRRP-ASPVKEVTSV----ENVMTVEDHEV 139
             G+KFWSWKALFGHMRCHPERQWRGINPPPN+R P A+  K++  +     + M+ EDHEV
Sbjct:    83 GRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQILPNWVSFMSEEDHEV 142

Query:   140 AACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA 199
             A+CLLML+NG     T S    I+              RFEC  CKKVFGSHQALGGHRA
Sbjct:   143 ASCLLMLSNG-----TPS-SSSIE--------------RFECGGCKKVFGSHQALGGHRA 182

Query:   200 SHKHVKGCFAITRSSD-----GCEIDHDH 223
             SHK+VKGCFAIT  +D          HDH
Sbjct:   183 SHKNVKGCFAITNVTDDPMTVSTSSGHDH 211

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2205583 AT1G02040 "AT1G02040" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 77/177 (43%), Positives = 96/177 (54%)

Query:   107 RGINPPPNF-RRPASPVKEVTSVE----NVMTVEDHEVAACLLMLAN-GDVGVGTGSFQQ 160
             RG +   N  RRP    +   S +    N+   ED E+A CL++L+N GD   G    Q 
Sbjct:    74 RGQHDEDNMSRRPPWKRERSMSTQHHHLNLSPNEDEELANCLVLLSNSGDAHGGDQHKQH 133

Query:   161 GIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEID 220
             G     T  V     +  F+C +CKKVF SHQALGGHRASHK VKGCFA     +  E +
Sbjct:   134 GHGKGKT--VKKQKTAQVFQCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEEEEEE 191

Query:   221 H---DHCSDGIVKENVDDERKMMMVLG------HKCSICLRVFSSGQALGGHKRCHW 268
             +   D  +D    E  D+E K    +       H+C+IC RVFSSGQALGGHKRCHW
Sbjct:   192 YKEDDDDNDEDEDEEEDEEDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRCHW 248

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2103311 AT3G60580 "AT3G60580" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 52/142 (36%), Positives = 79/142 (55%)

Query:   133 TVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDT-------NEVNLGGVSCRFECNSCK 185
             T  + ++A CL+ML+  D      S ++ ++  +T       N++N      R++C +C 
Sbjct:   121 TTTEEDLAFCLMMLSR-DKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCG 179

Query:   186 KVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGH 245
             KVF S+QALGGHRASHK  K   +  ++    E ++D+    +V + +           H
Sbjct:   180 KVFKSYQALGGHRASHK--KNRVSNNKTEQRSETEYDNVV--VVAKRI-----------H 224

Query:   246 KCSICLRVFSSGQALGGHKRCH 267
             +C ICLRVF+SGQALGGHKR H
Sbjct:   225 ECPICLRVFASGQALGGHKRSH 246

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2156435 AT5G56200 "AT5G56200" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 40/101 (39%), Positives = 53/101 (52%)

Query:   173 GGVSCRFE--CNSCKKVFGSHQALGGHRASHKHVKGC--FAITRSSDGCEIDHDHCSDGI 228
             GG   R +  C +C K F S+QALGGHRASH  VK         +++   +  +    G+
Sbjct:   334 GGAGAREKHVCVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAIITGL 393

Query:   229 VKENVDDERKMMMVLG-HKCSICLRVFSSGQALGGHKRCHW 268
                   +        G H C+IC + FS+GQALGGHKRCHW
Sbjct:   394 ASAQGTNTSLSSSHNGDHVCNICHKSFSTGQALGGHKRCHW 434

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2091201 ZF2 "AT3G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 58/153 (37%), Positives = 82/153 (53%)

Query:   119 ASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCR 178
             +SP +     +N    E+  +A CLLMLA  D    T   QQ   +    E      +  
Sbjct:    51 SSPPRSRPKSQNQDLTEEEYLALCLLMLAK-DQPSQTRFHQQSQSLTPPPESK----NLP 105

Query:   179 FECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERK 238
             ++CN C+K F S+QALGGH+ASH+ +K    I+ ++D      D  +  I    V  E+ 
Sbjct:   106 YKCNVCEKAFPSYQALGGHKASHR-IKPPTVISTTAD------DSTAPTI--SIVAGEKH 156

Query:   239 MMMVLG--HKCSICLRVFSSGQALGGHKRCHWE 269
              +   G  H+CSIC +VF +GQALGGHKRCH+E
Sbjct:   157 PIAASGKIHECSICHKVFPTGQALGGHKRCHYE 189

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2055583 AT2G45120 "AT2G45120" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
 Identities = 32/83 (38%), Positives = 46/83 (55%)

Query:   133 TVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSC----RFECNSCKKVF 188
             T  + ++A CL+ML+  D        +Q ++  +T+  +    S     RF+C +C KVF
Sbjct:   145 TTTEEDLAFCLIMLSR-DKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVF 203

Query:   189 GSHQALGGHRASHKHVKGCFAIT 211
              S+QALGGHRASHK  K C   T
Sbjct:   204 KSYQALGGHRASHKKNKACMTKT 226

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2179964 ZAT6 "AT5G04340" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 49/136 (36%), Positives = 73/136 (53%)

Query:   135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCR-FECNSCKKVFGSHQA 193
             ED  +A CL++LA      G  +    +    ++   L  +    ++C+ C K F S+QA
Sbjct:    48 EDEYIALCLMLLARD----GDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQA 103

Query:   194 LGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRV 253
             LGGH+ASH+     F++T+S+ G E+     S  I    +        V  H CSIC + 
Sbjct:   104 LGGHKASHRK---SFSLTQSAGGDELS---TSSAITTSGISGGGGGS-VKSHVCSICHKS 156

Query:   254 FSSGQALGGHKRCHWE 269
             F++GQALGGHKRCH+E
Sbjct:   157 FATGQALGGHKRCHYE 172

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0055062 "phosphate ion homeostasis" evidence=IGI

GO:2000280 "regulation of root development" evidence=IGI

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2158192 ZF1 "AT5G67450" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 49/140 (35%), Positives = 71/140 (50%)

Query:   135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQAL 194
             E+  +A CLLMLA G             +   ++  +       ++C  C K F S+QAL
Sbjct:    60 EEEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRD-------YKCTVCGKSFSSYQAL 112

Query:   195 GGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVD-DERKMMMVLG--HKCSICL 251
             GGH+ SH+      +IT  +     ++ H + G V  NV  +    +   G  H CSIC 
Sbjct:   113 GGHKTSHRKPTNT-SITSGNQELS-NNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICF 170

Query:   252 RVFSSGQALGGHKRCHWEKG 271
             + F+SGQALGGHKRCH++ G
Sbjct:   171 KSFASGQALGGHKRCHYDGG 190

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2083053 AT3G49930 "AT3G49930" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 38/93 (40%), Positives = 56/93 (60%)

Query:   179 FECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERK 238
             ++C+ C K F S+QALGGH+ SH+  K       +S+G   ++ + S+G+V ++      
Sbjct:    94 YKCSVCGKSFPSYQALGGHKTSHR--KPVSVDVNNSNGTVTNNGNISNGLVGQSGKT--- 148

Query:   239 MMMVLGHKCSICLRVFSSGQALGGHKRCHWEKG 271
                   H CSIC + F SGQALGGHKRCH++ G
Sbjct:   149 ------HNCSICFKSFPSGQALGGHKRCHYDGG 175

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O65499	ZAT3_ARATH	No assigned EC number	0.4969	0.8589	0.9436	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-06
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-04

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 245 HKCSICLRVFSSGQALGGHKRCHWEK 270
           H C +C + FSS QALGGHK+ H   
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 179 FECNSCKKVFGSHQALGGHRASHKH 203
             C  C K F S QALGGH+ SH  
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSHCS 26

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.94
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.87
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.8
KOG3608	467	consensus Zn finger proteins [General function pre	99.76
KOG3576	267	consensus Ovo and related transcription factors [T	99.67
KOG3608	467	consensus Zn finger proteins [General function pre	99.66
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.65
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.43
KOG3576	267	consensus Ovo and related transcription factors [T	99.41
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.37
PLN03086	567	PRLI-interacting factor K; Provisional	99.09
PHA00733	128	hypothetical protein	98.99
PLN03086	567	PRLI-interacting factor K; Provisional	98.85
PHA00733	128	hypothetical protein	98.81
PHA02768	55	hypothetical protein; Provisional	98.72
KOG3993	500	consensus Transcription factor (contains Zn finger	98.6
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.58
PHA02768	55	hypothetical protein; Provisional	98.55
KOG3993	500	consensus Transcription factor (contains Zn finger	98.5
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.29
PHA00732	79	hypothetical protein	98.19
PHA00616	44	hypothetical protein	98.02
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.0
PHA00732	79	hypothetical protein	97.96
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.74
PHA00616	44	hypothetical protein	97.72
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.66
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.64
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.55
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.33
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.32
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.17
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.12
smart00355	26	ZnF_C2H2 zinc finger.	97.05
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.94
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.66
smart00355	26	ZnF_C2H2 zinc finger.	96.66
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.5
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	96.38
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.24
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.21
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.2
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.14
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.02
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	95.61
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	95.57
PRK04860	160	hypothetical protein; Provisional	95.54
PRK04860	160	hypothetical protein; Provisional	95.36
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.06
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.94
COG5048	467	FOG: Zn-finger [General function prediction only]	94.86
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.59
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.19
KOG1146	1406	consensus Homeobox protein [General function predi	93.5
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.12
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.9
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.89
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	88.95
KOG2893	341	consensus Zn finger protein [General function pred	88.21
KOG2186	276	consensus Cell growth-regulating nucleolar protein	87.29
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.21
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	86.85
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	86.51
COG5048	467	FOG: Zn-finger [General function prediction only]	86.12
KOG2893	341	consensus Zn finger protein [General function pred	85.05
COG1198	730	PriA Primosomal protein N' (replication factor Y)	83.49
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	83.35
PHA00626	59	hypothetical protein	81.78
KOG1146	1406	consensus Homeobox protein [General function predi	81.75
COG4049	65	Uncharacterized protein containing archaeal-type C	81.6
COG5236	493	Uncharacterized conserved protein, contains RING Z	81.52

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.94  E-value=1.7e-27  Score=201.97  Aligned_cols=135  Identities=22%  Similarity=0.336  Sum_probs=118.9

Q ss_pred             CCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCC
Q 038358           76 KITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGT  155 (312)
Q Consensus        76 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~  155 (312)
                      ...|.|..|||.+.+..+|.+|.+.|-.-     .-.+.|.                      |++|            +
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~-----~s~ka~~----------------------C~~C------------~  168 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSL-----DSKKAFS----------------------CKYC------------G  168 (279)
T ss_pred             CCceeccccccccccccccchhhcccccc-----ccccccc----------------------CCCC------------C
Confidence            34589999999999999999999998731     0022344                      4444            8


Q ss_pred             ccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhh
Q 038358          156 GSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDD  235 (312)
Q Consensus       156 k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l  235 (312)
                      |.|.....|+.|+|+|+    -+++|.+|||.|....-|+.|+|+|+||||     |.|..|+++|.+++        +|
T Consensus       169 K~YvSmpALkMHirTH~----l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP-----F~C~hC~kAFADRS--------NL  231 (279)
T KOG2462|consen  169 KVYVSMPALKMHIRTHT----LPCECGICGKAFSRPWLLQGHIRTHTGEKP-----FSCPHCGKAFADRS--------NL  231 (279)
T ss_pred             ceeeehHHHhhHhhccC----CCcccccccccccchHHhhcccccccCCCC-----ccCCcccchhcchH--------HH
Confidence            89999999999999996    499999999999999999999999999999     59999999999977        99


Q ss_pred             HhHhhhcCc---eecCccccccCChhhHhhhhhh
Q 038358          236 ERKMMMVLG---HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       236 ~~H~~~H~~---~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      +.|+++|.+   |+|..|+|.|...++|.+|...
T Consensus       232 RAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  232 RAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999999   9999999999999999999764

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.87  E-value=1.5e-22  Score=171.96  Aligned_cols=111  Identities=25%  Similarity=0.366  Sum_probs=98.1

Q ss_pred             CCCCCCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCC
Q 038358           71 DPGAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGD  150 (312)
Q Consensus        71 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  150 (312)
                      .+...++.+.|++|||.|.+...|+.|+++|+- +         +                      +|.+|        
T Consensus       154 ~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l-~---------c----------------------~C~iC--------  193 (279)
T KOG2462|consen  154 RSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL-P---------C----------------------ECGIC--------  193 (279)
T ss_pred             ccccccccccCCCCCceeeehHHHhhHhhccCC-C---------c----------------------ccccc--------
Confidence            344457789999999999999999999999983 1         2                      34444        


Q ss_pred             CCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccc
Q 038358          151 VGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVK  230 (312)
Q Consensus       151 ~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~  230 (312)
                          ||.|.+..-|+-|+|+|+|  ||||.|..|+|+|..+++|+.|+++|.+.|.|     +|..|+|.|...+     
T Consensus       194 ----GKaFSRPWLLQGHiRTHTG--EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~-----qC~~C~KsFsl~S-----  257 (279)
T KOG2462|consen  194 ----GKAFSRPWLLQGHIRTHTG--EKPFSCPHCGKAFADRSNLRAHMQTHSDVKKH-----QCPRCGKSFALKS-----  257 (279)
T ss_pred             ----cccccchHHhhcccccccC--CCCccCCcccchhcchHHHHHHHHhhcCCccc-----cCcchhhHHHHHH-----
Confidence                8999999999999999999  99999999999999999999999999999995     9999999999966     


Q ss_pred             cchhhHhHhh
Q 038358          231 ENVDDERKMM  240 (312)
Q Consensus       231 ~~~~l~~H~~  240 (312)
                         .|.+|..
T Consensus       258 ---yLnKH~E  264 (279)
T KOG2462|consen  258 ---YLNKHSE  264 (279)
T ss_pred             ---HHHHhhh
Confidence               7888864

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.80  E-value=1.3e-19  Score=173.20  Aligned_cols=53  Identities=23%  Similarity=0.241  Sum_probs=47.2

Q ss_pred             CcccCccccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHh
Q 038358           77 ITRPCSECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVE  129 (312)
Q Consensus        77 ~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~  129 (312)
                      ..++|.+|.|.|.+.+.|+.|+|.|+| +||+|..||..|..+-.|..|+.+|.
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecc
Confidence            357899999999999999999999996 89999999999999888776666655

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.76  E-value=3.5e-19  Score=155.29  Aligned_cols=169  Identities=18%  Similarity=0.279  Sum_probs=118.6

Q ss_pred             cccCc--cccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhcc---CcccccccccchhccCCC
Q 038358           78 TRPCS--ECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMT---VEDHEVAACLLMLANGDV  151 (312)
Q Consensus        78 ~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~---~~~~~C~~C~~~f~~~~~  151 (312)
                      .+.|.  .|.+.|.+++.|.+|++.|++ +..-|..||.-|...    ..+.-|.+..+   .++|.|..|-+.|++...
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~----tkl~DH~rRqt~l~~n~fqC~~C~KrFaTekl  252 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTK----TKLFDHLRRQTELNTNSFQCAQCFKRFATEKL  252 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccc----cHHHHHHHhhhhhcCCchHHHHHHHHHhHHHH
Confidence            35555  499999999999999999996 455677777777664    33444444333   348999999777776654


Q ss_pred             --------------CCCCccccCchhHHhHHhh-hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCC
Q 038358          152 --------------GVGTGSFQQGIQVQDTNEV-NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDG  216 (312)
Q Consensus       152 --------------~~C~k~F~~~~~L~~H~~~-H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~  216 (312)
                                    +.|..+....+.|..|++. |..  .|||+|+.|++.|.+.+.|.+|..+|+ +-.     |.|+.
T Consensus       253 L~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~--dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~-----y~C~h  324 (467)
T KOG3608|consen  253 LKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSK--DKPFKCDECDTRCVRESDLAKHVQVHS-KTV-----YQCEH  324 (467)
T ss_pred             HHHHHHHhhhcccccccccCCCChHHHHHHHHhhhcc--CCCccccchhhhhccHHHHHHHHHhcc-ccc-----eecCC
Confidence                          6667777777777777764 544  777777777777777777777777777 333     36765


Q ss_pred             --CCCCCcCCCCCccccchhhHhHhhhcC-c-----eecCccccccCChhhHhhhhhh
Q 038358          217 --CEIDHDHCSDGIVKENVDDERKMMMVL-G-----HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       217 --C~~~f~~~~~~~~~~~~~l~~H~~~H~-~-----~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                        |.++|....        .+++|++.+. |     |.|..|++.|.+..+|..|++.
T Consensus       325 ~~C~~s~r~~~--------q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  325 PDCHYSVRTYT--------QMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             CCCcHHHHHHH--------HHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHH
Confidence              777766633        7777776433 4     7777788888777777777643

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.67  E-value=8.9e-17  Score=130.46  Aligned_cols=123  Identities=20%  Similarity=0.350  Sum_probs=94.3

Q ss_pred             CCCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCC
Q 038358           74 APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGV  153 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~  153 (312)
                      .....|.|.+|+|.|.....|.+||+.|..-                              +.|-|..|           
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~v------------------------------kr~lct~c-----------  151 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDV------------------------------KRHLCTFC-----------  151 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHH------------------------------HHHHHhhc-----------
Confidence            3345699999999999999999999988851                              12445555           


Q ss_pred             CCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC-CcccccccCCCCCCCCcCCCCCccccc
Q 038358          154 GTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK-GCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       154 C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k-~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                       ||.|.....|++|+|+|+|  .+||+|..|+++|+++-.|..|.+.-+|.. .|                         
T Consensus       152 -gkgfndtfdlkrh~rthtg--vrpykc~~c~kaftqrcsleshl~kvhgv~~~y-------------------------  203 (267)
T KOG3576|consen  152 -GKGFNDTFDLKRHTRTHTG--VRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQY-------------------------  203 (267)
T ss_pred             -cCcccchhhhhhhhccccC--ccccchhhhhHHHHhhccHHHHHHHHcCchHHH-------------------------
Confidence             7888888899999999999  999999999999999999999987544433 22                         


Q ss_pred             hhhHhHhhhcCceecCccccccCChhhHhhhhhhcc
Q 038358          233 VDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                       +++  +|.-.-|.|+.||.+-.....+..|++.|+
T Consensus       204 -ayk--err~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  204 -AYK--ERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             -HHH--HhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence             111  000001888888888888888888888776

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.66  E-value=5.2e-18  Score=148.03  Aligned_cols=140  Identities=14%  Similarity=0.178  Sum_probs=108.7

Q ss_pred             CCCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhh-ccC-cccccccccchhccCCC
Q 038358           74 APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENV-MTV-EDHEVAACLLMLANGDV  151 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~-~~~-~~~~C~~C~~~f~~~~~  151 (312)
                      ....+|.|.+|.|.|.+...|..|++.|.. -|+|..|+....+    ...+.+|++. |.. ++|+|+.|         
T Consensus       233 l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-~ykCplCdmtc~~----~ssL~~H~r~rHs~dkpfKCd~C---------  298 (467)
T KOG3608|consen  233 LNTNSFQCAQCFKRFATEKLLKSHVVRHVN-CYKCPLCDMTCSS----ASSLTTHIRYRHSKDKPFKCDEC---------  298 (467)
T ss_pred             hcCCchHHHHHHHHHhHHHHHHHHHHHhhh-cccccccccCCCC----hHHHHHHHHhhhccCCCccccch---------
Confidence            344578888888888888888888888874 3445555422222    5677888874 443 39999999         


Q ss_pred             CCCCccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhh-cCCCCCcccccccCCCCCCCCcCCCCCc
Q 038358          152 GVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRAS-HKHVKGCFAITRSSDGCEIDHDHCSDGI  228 (312)
Q Consensus       152 ~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~-H~~~k~y~~~~~~C~~C~~~f~~~~~~~  228 (312)
                         .+.|.+.+.|..|..+|.   +..|+|+.  |...|.....|.+|++. |-|..|   ..|+|..|++.|++..   
T Consensus       299 ---d~~c~~esdL~kH~~~HS---~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np---~~Y~CH~Cdr~ft~G~---  366 (467)
T KOG3608|consen  299 ---DTRCVRESDLAKHVQVHS---KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP---ILYACHCCDRFFTSGK---  366 (467)
T ss_pred             ---hhhhccHHHHHHHHHhcc---ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCC---Cceeeecchhhhccch---
Confidence               678999999999999997   68899988  99999999999999985 446654   2469999999999955   


Q ss_pred             cccchhhHhHhhhcCc
Q 038358          229 VKENVDDERKMMMVLG  244 (312)
Q Consensus       229 ~~~~~~l~~H~~~H~~  244 (312)
                           +|.+|++.-++
T Consensus       367 -----~L~~HL~kkH~  377 (467)
T KOG3608|consen  367 -----SLSAHLMKKHG  377 (467)
T ss_pred             -----hHHHHHHHhhc
Confidence                 88899876555

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.65  E-value=4.2e-17  Score=156.13  Aligned_cols=81  Identities=21%  Similarity=0.311  Sum_probs=76.1

Q ss_pred             eecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc-------eecC---
Q 038358          179 FECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG-------HKCS---  248 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~-------~~C~---  248 (312)
                      -+|-+|-+...-.++|+.|.++|+||+|     |+|.+||+.|.+++        +|+.|+.+|..       |.|+   
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERP-----FkCKiCgRAFtTkG--------NLkaH~~vHka~p~~R~q~ScP~~~  672 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERP-----FKCKICGRAFTTKG--------NLKAHMSVHKAKPPARVQFSCPSTF  672 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCc-----cccccccchhcccc--------chhhcccccccCccccccccCCchh
Confidence            5899999999999999999999999999     69999999999988        89999999987       9999   


Q ss_pred             ccccccCChhhHhhhhhhccCCCC
Q 038358          249 ICLRVFSSGQALGGHKRCHWEKGD  272 (312)
Q Consensus       249 ~C~k~F~~~~~L~~H~~~H~~~~~  272 (312)
                      +|.+.|.....|..|+|+|.+...
T Consensus       673 ic~~kftn~V~lpQhIriH~~~~~  696 (958)
T KOG1074|consen  673 ICQKKFTNAVTLPQHIRIHLGGQI  696 (958)
T ss_pred             hhcccccccccccceEEeecCCCC
Confidence            999999999999999999996543

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.43  E-value=4.3e-14  Score=133.71  Aligned_cols=104  Identities=22%  Similarity=0.425  Sum_probs=85.7

Q ss_pred             ccCccccccCCChHHHHHHHH-hCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCCcc
Q 038358           79 RPCSECGKKFWSWKALFGHMR-CHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGS  157 (312)
Q Consensus        79 ~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~k~  157 (312)
                      ..|.+|.+.+.....|+.|++ +|...       ...|.|.                      .|            ..+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekn-------e~nfsC~----------------------lC------------syt  249 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKN-------EPNFSCM----------------------LC------------SYT  249 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhC-------CCCCcch----------------------hh------------hhh
Confidence            689999999999999999987 44421       2224443                      33            778


Q ss_pred             ccCchhHHhHHhhhcCC-----------CCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCC
Q 038358          158 FQQGIQVQDTNEVNLGG-----------VSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSD  226 (312)
Q Consensus       158 F~~~~~L~~H~~~H~~~-----------~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~  226 (312)
                      |..+..|.+||.+|...           .-+.|+|..|||+|..+-.|+.|+|+|.|||||     .|+.|+|+|++.++
T Consensus       250 FAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPf-----eCpnCkKRFSHSGS  324 (1007)
T KOG3623|consen  250 FAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPF-----ECPNCKKRFSHSGS  324 (1007)
T ss_pred             hhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCc-----CCcccccccccCCc
Confidence            99999999999988531           246799999999999999999999999999995     99999999999885


Q ss_pred             Cc
Q 038358          227 GI  228 (312)
Q Consensus       227 ~~  228 (312)
                      +.
T Consensus       325 yS  326 (1007)
T KOG3623|consen  325 YS  326 (1007)
T ss_pred             cc
Confidence            43

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.41  E-value=2.3e-14  Score=116.52  Aligned_cols=81  Identities=27%  Similarity=0.450  Sum_probs=73.8

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---eecCcccc
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---HKCSICLR  252 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C~~C~k  252 (312)
                      ...|.|.+|+|.|.....|.+|++-|...+-|     .|..||+.|..        .++|++|+|+|+|   |+|..|+|
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~-----lct~cgkgfnd--------tfdlkrh~rthtgvrpykc~~c~k  181 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRH-----LCTFCGKGFND--------TFDLKRHTRTHTGVRPYKCSLCEK  181 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHH-----HHhhccCcccc--------hhhhhhhhccccCccccchhhhhH
Confidence            56799999999999999999999999999885     99999999999        6699999999999   99999999


Q ss_pred             ccCChhhHhhhhhhccC
Q 038358          253 VFSSGQALGGHKRCHWE  269 (312)
Q Consensus       253 ~F~~~~~L~~H~~~H~~  269 (312)
                      +|.++..|..|++.-+|
T Consensus       182 aftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  182 AFTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHHhhccHHHHHHHHcC
Confidence            99999999999854433

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.37  E-value=1.3e-13  Score=130.48  Aligned_cols=71  Identities=23%  Similarity=0.384  Sum_probs=62.9

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|.|++|            .|+|...+.|.+|.-.|+|  .+||+|.+|.|+|..+-.|..|+|.|.|||||     .|+
T Consensus       894 myaCDqC------------DK~FqKqSSLaRHKYEHsG--qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPf-----QCd  954 (1007)
T KOG3623|consen  894 MYACDQC------------DKAFQKQSSLARHKYEHSG--QRPYQCIICKKAFKHKHHLTEHKRLHSGEKPF-----QCD  954 (1007)
T ss_pred             cchHHHH------------HHHHHhhHHHHHhhhhhcC--CCCcccchhhHhhhhhhhhhhhhhhccCCCcc-----hhh
Confidence            6999999            5688888999999999998  99999999999999999999999999999994     777


Q ss_pred             CCCCCCcCCC
Q 038358          216 GCEIDHDHCS  225 (312)
Q Consensus       216 ~C~~~f~~~~  225 (312)
                      .|+|+|++.+
T Consensus       955 KClKRFSHSG  964 (1007)
T KOG3623|consen  955 KCLKRFSHSG  964 (1007)
T ss_pred             hhhhhccccc
Confidence            7777777766

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.09  E-value=3.8e-10  Score=107.63  Aligned_cols=149  Identities=13%  Similarity=0.124  Sum_probs=104.1

Q ss_pred             ccCccccccCCChHHHHHHHHhCCCCCCCCCC--CCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCCc
Q 038358           79 RPCSECGKKFWSWKALFGHMRCHPERQWRGIN--PPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTG  156 (312)
Q Consensus        79 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~--c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~k  156 (312)
                      -.|..|..... ...|..|........-.|..  |+..|.-     .        .-.+.+.|+.|            ++
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r-----~--------el~~H~~C~~C------------gk  461 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLRV-----E--------EAKNHVHCEKC------------GQ  461 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceeec-----c--------ccccCccCCCC------------CC
Confidence            47999987755 55666887655443334443  4433321     1        11223678888            67


Q ss_pred             cccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCC-cc-ccchh
Q 038358          157 SFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDG-IV-KENVD  234 (312)
Q Consensus       157 ~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~-~~-~~~~~  234 (312)
                      .|. ...|..|+++|+    +++.|+ ||+.+ .+..|..|+.+|.+++++     .|..|++.|....+. .+ .....
T Consensus       462 ~f~-~s~LekH~~~~H----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi-----~C~fC~~~v~~g~~~~d~~d~~s~  529 (567)
T PLN03086        462 AFQ-QGEMEKHMKVFH----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLI-----TCRFCGDMVQAGGSAMDVRDRLRG  529 (567)
T ss_pred             ccc-hHHHHHHHHhcC----CCccCC-CCCCc-chhHHHhhhhccCCCCce-----eCCCCCCccccCccccchhhhhhh
Confidence            775 578999999984    689999 99765 678999999999999995     999999999532110 00 01237


Q ss_pred             hHhHhhhcCc--eecCccccccCChhhHhhhhhh
Q 038358          235 DERKMMMVLG--HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       235 l~~H~~~H~~--~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |..|+.++..  +.|..||+.|..+ .|..|+-.
T Consensus       530 Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        530 MSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             HHHHHHhcCCcceEccccCCeeeeh-hHHHHHHH
Confidence            8899998755  9999999998876 56778643

>PHA00733 hypothetical protein

Probab=98.99  E-value=2.2e-10  Score=89.67  Aligned_cols=81  Identities=14%  Similarity=0.125  Sum_probs=67.8

Q ss_pred             CcceecCCCccccCChHHHHhH--hh---hcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc-eecCc
Q 038358          176 SCRFECNSCKKVFGSHQALGGH--RA---SHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG-HKCSI  249 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H--~~---~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~-~~C~~  249 (312)
                      .+++.|.+|.+.|.....|..|  ++   .+.+++||     .|+.|++.|.+.+        .|..|+++|.. |.|++
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy-----~C~~Cgk~Fss~s--------~L~~H~r~h~~~~~C~~  104 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPY-----VCPLCLMPFSSSV--------SLKQHIRYTEHSKVCPV  104 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCc-----cCCCCCCcCCCHH--------HHHHHHhcCCcCccCCC
Confidence            6889999999999887777666  22   23457784     9999999999955        89999998866 99999


Q ss_pred             cccccCChhhHhhhhhhccC
Q 038358          250 CLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       250 C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |++.|.....|..|++..++
T Consensus       105 CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        105 CGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCccCCHHHHHHHHHHhcC
Confidence            99999999999999977654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.85  E-value=6.5e-09  Score=99.30  Aligned_cols=114  Identities=13%  Similarity=0.184  Sum_probs=84.4

Q ss_pred             cCcc--ccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCCcc
Q 038358           80 PCSE--CGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGS  157 (312)
Q Consensus        80 ~C~~--C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~k~  157 (312)
                      .|+.  ||..|. +..|..|        +.|..|++.|.     ...+..|+.++. .++.|+ |            |+.
T Consensus       435 ~Cp~~~Cg~v~~-r~el~~H--------~~C~~Cgk~f~-----~s~LekH~~~~H-kpv~Cp-C------------g~~  486 (567)
T PLN03086        435 VCPHDGCGIVLR-VEEAKNH--------VHCEKCGQAFQ-----QGEMEKHMKVFH-EPLQCP-C------------GVV  486 (567)
T ss_pred             eCCcccccceee-ccccccC--------ccCCCCCCccc-----hHHHHHHHHhcC-CCccCC-C------------CCC
Confidence            5664  888773 2333333        46777777664     255677777763 678888 8            544


Q ss_pred             ccCchhHHhHHhhhcCCCCcceecCCCccccC----------ChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCC
Q 038358          158 FQQGIQVQDTNEVNLGGVSCRFECNSCKKVFG----------SHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDG  227 (312)
Q Consensus       158 F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~----------~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~  227 (312)
                      + .+..|..|+++|.+  ++++.|..|++.|.          ....|..|..++ |.+++     .|..||+.+..+   
T Consensus       487 ~-~R~~L~~H~~thCp--~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~-----~C~~Cgk~Vrlr---  554 (567)
T PLN03086        487 L-EKEQMVQHQASTCP--LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTA-----PCDSCGRSVMLK---  554 (567)
T ss_pred             c-chhHHHhhhhccCC--CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcce-----EccccCCeeeeh---
Confidence            4 56899999999988  99999999999995          245899999986 88884     999999998873   


Q ss_pred             ccccchhhHhHh
Q 038358          228 IVKENVDDERKM  239 (312)
Q Consensus       228 ~~~~~~~l~~H~  239 (312)
                            .+..|+
T Consensus       555 ------dm~~H~  560 (567)
T PLN03086        555 ------EMDIHQ  560 (567)
T ss_pred             ------hHHHHH
Confidence                  556665

>PHA00733 hypothetical protein

Probab=98.81  E-value=3.7e-09  Score=82.75  Aligned_cols=87  Identities=10%  Similarity=0.096  Sum_probs=64.0

Q ss_pred             CCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCC
Q 038358           76 KITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGT  155 (312)
Q Consensus        76 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~  155 (312)
                      .+.+.|.+|.+.|.....|..|..                         +..+...+...+|+|++|            +
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~-------------------------l~~~~~~~~~kPy~C~~C------------g   80 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSY-------------------------LYKLLTSKAVSPYVCPLC------------L   80 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHH-------------------------HHhhcccCCCCCccCCCC------------C
Confidence            345789999988888777766621                         111222233345666666            8


Q ss_pred             ccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          156 GSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       156 k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      +.|.....|..|++.|    +.+|.|..|++.|.....|..|+...++
T Consensus        81 k~Fss~s~L~~H~r~h----~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         81 MPFSSSVSLKQHIRYT----EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CcCCCHHHHHHHHhcC----CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            8999999999999987    3579999999999999999999886554

>PHA02768 hypothetical protein; Provisional

Probab=98.72  E-value=8.3e-09  Score=67.09  Aligned_cols=42  Identities=14%  Similarity=0.332  Sum_probs=34.8

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCS  225 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~  225 (312)
                      --|+|+.||+.|...++|..|+++|+  ++|     +|..|++.|...+
T Consensus         4 ~~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~-----kc~~C~k~f~~~s   45 (55)
T PHA02768          4 LGYECPICGEIYIKRKSMITHLRKHN--TNL-----KLSNCKRISLRTG   45 (55)
T ss_pred             cccCcchhCCeeccHHHHHHHHHhcC--Ccc-----cCCcccceecccc
Confidence            35899999999999999999999999  563     7777777776654

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.60  E-value=2e-08  Score=90.52  Aligned_cols=173  Identities=18%  Similarity=0.192  Sum_probs=92.2

Q ss_pred             CcccCccccccCCChHHHHHHHHhCC-CCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCC
Q 038358           77 ITRPCSECGKKFWSWKALFGHMRCHP-ERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGT  155 (312)
Q Consensus        77 ~~~~C~~C~k~f~~~~~L~~H~~~H~-~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~  155 (312)
                      ..|.|..|...|.....|.+|.-.-. ...|+|.+|++.|.|+.++-    .|++-|.-++---. -|-   ..     .
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLA----SHRRWHKPR~eaa~-a~~---~P-----~  332 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLA----SHRRWHKPRPEAAK-AGS---PP-----P  332 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhh----hhhcccCCchhhhh-cCC---CC-----h
Confidence            35999999999999999999974322 23466667666666665432    22222221100000 000   00     0


Q ss_pred             c-cccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC-CC---------------c-----------
Q 038358          156 G-SFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV-KG---------------C-----------  207 (312)
Q Consensus       156 k-~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~-k~---------------y-----------  207 (312)
                      + .-......+.-.+.-....+-.|.|.+|++.|.+...|++|+.+|..- .+               +           
T Consensus       333 k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~  412 (500)
T KOG3993|consen  333 KQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSS  412 (500)
T ss_pred             hhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccc
Confidence            0 000000000000000001134699999999999999999998876321 10               0           


Q ss_pred             -----------cc---ccccCCCCCCCCcCCCCCccccchhhHhHhhh-c--CceecCccccccCChhhHhhhhh-hccC
Q 038358          208 -----------FA---ITRSSDGCEIDHDHCSDGIVKENVDDERKMMM-V--LGHKCSICLRVFSSGQALGGHKR-CHWE  269 (312)
Q Consensus       208 -----------~~---~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~-H--~~~~C~~C~k~F~~~~~L~~H~~-~H~~  269 (312)
                                 -+   .-..|+.|+-.+.++++.-        .+.|. +  .+|.|.+|.-.|.....|.+|+. .|-.
T Consensus       413 a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sg--------g~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  413 ASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSG--------GYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             cccccccceeeeeccccccCCCCCCCCcccCCCCC--------ccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence                       00   0023556665555544211        11111 1  11999999999999999999974 4544


Q ss_pred             C
Q 038358          270 K  270 (312)
Q Consensus       270 ~  270 (312)
                      +
T Consensus       485 e  485 (500)
T KOG3993|consen  485 E  485 (500)
T ss_pred             H
Confidence            3

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.58  E-value=3.9e-08  Score=54.58  Aligned_cols=26  Identities=19%  Similarity=0.520  Sum_probs=21.0

Q ss_pred             hHHhHHhhhcCCCCcceecCCCccccCC
Q 038358          163 QVQDTNEVNLGGVSCRFECNSCKKVFGS  190 (312)
Q Consensus       163 ~L~~H~~~H~~~~~k~~~C~~C~~~F~~  190 (312)
                      +|.+|+++|+|  ++||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~--~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG--EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS--SSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCC--CCCCCCCCCcCeeCc
Confidence            47788888888  888888888888863

...

>PHA02768 hypothetical protein; Provisional

Probab=98.55  E-value=2.8e-08  Score=64.66  Aligned_cols=43  Identities=9%  Similarity=0.114  Sum_probs=37.7

Q ss_pred             cccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHH
Q 038358          137 HEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALG  195 (312)
Q Consensus       137 ~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~  195 (312)
                      |+|++|            |+.|....+|..|+++|+    ++|+|..|++.|.+.+.|.
T Consensus         6 y~C~~C------------GK~Fs~~~~L~~H~r~H~----k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPIC------------GEIYIKRKSMITHLRKHN----TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchh------------CCeeccHHHHHHHHHhcC----CcccCCcccceecccceeE
Confidence            667777            889999999999999995    6999999999999877664

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.50  E-value=4.6e-08  Score=88.23  Aligned_cols=110  Identities=18%  Similarity=0.325  Sum_probs=70.6

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHH--hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCccccccc
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTN--EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRS  213 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~--~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~  213 (312)
                      .|.|..|            ...|.....|.+|.  ++-    ...|+|+.|+|.|.--.+|-.|.|.|.-...-      
T Consensus       267 dyiCqLC------------K~kYeD~F~LAQHrC~RIV----~vEYrCPEC~KVFsCPANLASHRRWHKPR~ea------  324 (500)
T KOG3993|consen  267 DYICQLC------------KEKYEDAFALAQHRCPRIV----HVEYRCPECDKVFSCPANLASHRRWHKPRPEA------  324 (500)
T ss_pred             HHHHHHH------------HHhhhhHHHHhhccCCeeE----EeeecCCcccccccCchhhhhhhcccCCchhh------
Confidence            5999999            55677777899996  332    34799999999999999999999999532210      


Q ss_pred             CCCCCCCCcCCCCCccccchhhHhHhh----hcCc-eecCccccccCChhhHhhhhhhccCCC
Q 038358          214 SDGCEIDHDHCSDGIVKENVDDERKMM----MVLG-HKCSICLRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       214 C~~C~~~f~~~~~~~~~~~~~l~~H~~----~H~~-~~C~~C~k~F~~~~~L~~H~~~H~~~~  271 (312)
                          .+.-....+-........+.-.|    .-.| |.|.+|+|.|.+..+|++|+.+|+...
T Consensus       325 ----a~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  325 ----AKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             ----hhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                00000000000000000000011    1112 999999999999999999999998543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.29  E-value=2.5e-07  Score=51.31  Aligned_cols=25  Identities=20%  Similarity=0.212  Sum_probs=19.8

Q ss_pred             HHHhHhhhcCCCCCcccccccCCCCCCCCc
Q 038358          193 ALGGHRASHKHVKGCFAITRSSDGCEIDHD  222 (312)
Q Consensus       193 ~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~  222 (312)
                      +|.+|+++|+|++||     +|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~-----~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPY-----KCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSE-----EESSSSEEES
T ss_pred             CHHHHhhhcCCCCCC-----CCCCCcCeeC
Confidence            589999999999994     6666666654

...

>PHA00732 hypothetical protein

Probab=98.19  E-value=8.8e-07  Score=63.07  Aligned_cols=46  Identities=13%  Similarity=0.183  Sum_probs=39.0

Q ss_pred             ccCCCCCCCCcCCCCCccccchhhHhHhhh-cCceecCccccccCChhhHhhhhhhcc
Q 038358          212 RSSDGCEIDHDHCSDGIVKENVDDERKMMM-VLGHKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       212 ~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~-H~~~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|..|++.|.+.+        .|..|++. |.++.|+.||+.|.   .|..|++++.
T Consensus         2 y~C~~Cgk~F~s~s--------~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          2 FKCPICGFTTVTLF--------ALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             ccCCCCCCccCCHH--------HHHHHhhcccCCCccCCCCCEeC---ChhhhhcccC
Confidence            68999999999955        99999984 76799999999998   5788886653

>PHA00616 hypothetical protein

Probab=98.02  E-value=2.3e-06  Score=52.98  Aligned_cols=30  Identities=17%  Similarity=0.348  Sum_probs=28.1

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      ||+|..||+.|..+.+|..|++.|+|++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            689999999999999999999999999984

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.00  E-value=2.8e-06  Score=45.60  Aligned_cols=23  Identities=48%  Similarity=0.738  Sum_probs=21.3

Q ss_pred             eecCccccccCChhhHhhhhhhc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCH  267 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H  267 (312)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.96  E-value=5.2e-06  Score=59.10  Aligned_cols=42  Identities=14%  Similarity=0.184  Sum_probs=33.7

Q ss_pred             CccccCchhHHhHHhh-hcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          155 TGSFQQGIQVQDTNEV-NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~-H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      ++.|.+..+|..|++. |.     ++.|+.|++.|.   .|..|++.+.+-
T Consensus         8 gk~F~s~s~Lk~H~r~~H~-----~~~C~~CgKsF~---~l~~H~~~~~~~   50 (79)
T PHA00732          8 GFTTVTLFALKQHARRNHT-----LTKCPVCNKSYR---RLNQHFYSQYDI   50 (79)
T ss_pred             CCccCCHHHHHHHhhcccC-----CCccCCCCCEeC---ChhhhhcccCCc
Confidence            7899999999999985 54     358999999998   578888766554

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.74  E-value=1.9e-05  Score=42.22  Aligned_cols=23  Identities=35%  Similarity=0.713  Sum_probs=21.1

Q ss_pred             eecCCCccccCChHHHHhHhhhc
Q 038358          179 FECNSCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H  201 (312)
                      |+|++|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=97.72  E-value=1.2e-05  Score=49.78  Aligned_cols=36  Identities=11%  Similarity=0.075  Sum_probs=30.9

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCc
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCK  185 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~  185 (312)
                      +|+|..|            |+.|.+...|..|++.|+|  ++++.|+.--
T Consensus         1 pYqC~~C------------G~~F~~~s~l~~H~r~~hg--~~~~~~~~~y   36 (44)
T PHA00616          1 MYQCLRC------------GGIFRKKKEVIEHLLSVHK--QNKLTLEYFY   36 (44)
T ss_pred             CCccchh------------hHHHhhHHHHHHHHHHhcC--CCccceeEEE
Confidence            4677777            8899999999999999999  9999987533

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.66  E-value=6.6e-05  Score=49.50  Aligned_cols=44  Identities=16%  Similarity=0.112  Sum_probs=32.7

Q ss_pred             CccccCchhHHhHHhh-hcCCCCcceecCCCccccCChHHHHhHhhhcC
Q 038358          155 TGSFQQGIQVQDTNEV-NLGGVSCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~-H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      ++. .....|..|... |.. ..+.+.|++|...+.  .+|..|+..++
T Consensus         9 ~~~-~~~~~L~~H~~~~H~~-~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    9 GKG-FSESSLVEHCEDEHRS-ESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCc-cCHHHHHHHHHhHCcC-CCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            664 446789999764 554 346899999998765  49999998754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.64  E-value=2.8e-05  Score=41.77  Aligned_cols=24  Identities=38%  Similarity=0.697  Sum_probs=19.8

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999998874

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.55  E-value=0.00011  Score=48.48  Aligned_cols=27  Identities=30%  Similarity=0.413  Sum_probs=19.0

Q ss_pred             ceecCCCccccCChHHHHhHhhh-cCCCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRAS-HKHVK  205 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~-H~~~k  205 (312)
                      .|.|+.|++ ..+...|..|... |..+.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~   29 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES   29 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC
Confidence            478888888 4556788888764 65543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=7.6e-05  Score=41.57  Aligned_cols=25  Identities=44%  Similarity=0.683  Sum_probs=22.9

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|..|++.|.+...|..|++.|..
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            7899999999999999999998864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.33  E-value=0.00016  Score=38.67  Aligned_cols=24  Identities=38%  Similarity=0.735  Sum_probs=19.7

Q ss_pred             eecCCCccccCChHHHHhHhhhcC
Q 038358          179 FECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      |.|++|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998763

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.32  E-value=0.00017  Score=40.17  Aligned_cols=26  Identities=46%  Similarity=0.807  Sum_probs=23.7

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      +|+|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999988753

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.17  E-value=0.0002  Score=53.22  Aligned_cols=71  Identities=20%  Similarity=0.231  Sum_probs=21.2

Q ss_pred             ecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhc--CceecCccccccCCh
Q 038358          180 ECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMV--LGHKCSICLRVFSSG  257 (312)
Q Consensus       180 ~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H--~~~~C~~C~k~F~~~  257 (312)
                      +|..|+..|.....|..|+...++...      .   ....+..        ...+..+++.-  ..+.|..|++.|.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~------~---~~~~l~~--------~~~~~~~~~~~~~~~~~C~~C~~~f~s~   63 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI------P---DQKYLVD--------PNRLLNYLRKKVKESFRCPYCNKTFRSR   63 (100)
T ss_dssp             -----------------------------------------------------------------SSEEBSSSS-EESSH
T ss_pred             Ccccccccccccccccccccccccccc------c---ccccccc--------ccccccccccccCCCCCCCccCCCCcCH
Confidence            588999999999999999875444221      0   0000011        01222232221  129999999999999


Q ss_pred             hhHhhhhhhc
Q 038358          258 QALGGHKRCH  267 (312)
Q Consensus       258 ~~L~~H~~~H  267 (312)
                      ..|..|++.+
T Consensus        64 ~~l~~Hm~~~   73 (100)
T PF12756_consen   64 EALQEHMRSK   73 (100)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHcCc
Confidence            9999999864

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.12  E-value=0.00037  Score=51.74  Aligned_cols=73  Identities=23%  Similarity=0.355  Sum_probs=21.0

Q ss_pred             cCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCCcccc
Q 038358           80 PCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGSFQ  159 (312)
Q Consensus        80 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~k~F~  159 (312)
                      .|..|+..|.+...|..||...++-.         +..                                     ...+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~---------~~~-------------------------------------~~~l~   34 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD---------IPD-------------------------------------QKYLV   34 (100)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             Cccccccccccccccccccccccccc---------ccc-------------------------------------ccccc
Confidence            48999999999999999996544310         000                                     11222


Q ss_pred             CchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhc
Q 038358          160 QGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       160 ~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  201 (312)
                      ....+..+++...   ...+.|..|++.|.+...|..|++.+
T Consensus        35 ~~~~~~~~~~~~~---~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   35 DPNRLLNYLRKKV---KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccc---CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3333434443332   24689999999999999999999864

>smart00355 ZnF_C2H2 zinc finger

Probab=97.05  E-value=0.00033  Score=38.09  Aligned_cols=24  Identities=42%  Similarity=0.672  Sum_probs=21.0

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998775

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.94  E-value=0.00067  Score=43.03  Aligned_cols=41  Identities=15%  Similarity=0.161  Sum_probs=26.4

Q ss_pred             HhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          165 QDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       165 ~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      ..+.+.|.. .+.|..|++|+..+.+..+|++|+.++++.||
T Consensus        12 ~~~~k~~~~-S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQ-SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCT-TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhc-cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            445544443 38999999999999999999999999888876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.66  E-value=0.00065  Score=59.74  Aligned_cols=58  Identities=12%  Similarity=0.132  Sum_probs=41.9

Q ss_pred             hccCcccccccccchhccCCCCCCCccccCchhHHhHHh-hhcC----------------CCCcceecCCCccccCChHH
Q 038358          131 VMTVEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE-VNLG----------------GVSCRFECNSCKKVFGSHQA  193 (312)
Q Consensus       131 ~~~~~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~-~H~~----------------~~~k~~~C~~C~~~F~~~~~  193 (312)
                      +..++||+|++=|          |.|.++.+..|+.|+. -|..                ...|||+|+.|+|.+.....
T Consensus       344 v~d~KpykCpV~g----------C~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNG  413 (423)
T COG5189         344 VKDGKPYKCPVEG----------CNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNG  413 (423)
T ss_pred             eecCceecCCCCC----------chhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCcc
Confidence            4456789998743          6999999999999985 3411                02477888888888777777


Q ss_pred             HHhHh
Q 038358          194 LGGHR  198 (312)
Q Consensus       194 L~~H~  198 (312)
                      |+-|+
T Consensus       414 LKYHr  418 (423)
T COG5189         414 LKYHR  418 (423)
T ss_pred             ceecc
Confidence            77664

>smart00355 ZnF_C2H2 zinc finger

Probab=96.66  E-value=0.0015  Score=35.38  Aligned_cols=25  Identities=40%  Similarity=0.752  Sum_probs=21.5

Q ss_pred             eecCCCccccCChHHHHhHhhhcCC
Q 038358          179 FECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |+|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5799999999999999999987753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.50  E-value=0.0015  Score=35.49  Aligned_cols=23  Identities=39%  Similarity=0.691  Sum_probs=20.9

Q ss_pred             eecCccccccCChhhHhhhhhhc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCH  267 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H  267 (312)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999865

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=96.38  E-value=0.0058  Score=59.87  Aligned_cols=80  Identities=11%  Similarity=0.075  Sum_probs=43.7

Q ss_pred             cccCchhHHhHHhhhc-C-CCCc-ceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccch
Q 038358          157 SFQQGIQVQDTNEVNL-G-GVSC-RFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENV  233 (312)
Q Consensus       157 ~F~~~~~L~~H~~~H~-~-~~~k-~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~  233 (312)
                      ....+..|..|++.-- + ...+ --.|..|...|.....|.+|++.++.         .|..|++.  ....=++....
T Consensus       158 k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~---------~chfC~~~--~~~neyy~~~~  226 (669)
T KOG2231|consen  158 KLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHE---------FCHFCDYK--TGQNEYYNDYD  226 (669)
T ss_pred             ehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhcccee---------heeecCcc--cccchhcccch
Confidence            4445667777765321 1 0011 13688888888888888888876653         55555421  00001111233


Q ss_pred             hhHhHhhhcCceecC
Q 038358          234 DDERKMMMVLGHKCS  248 (312)
Q Consensus       234 ~l~~H~~~H~~~~C~  248 (312)
                      .|..|.|.++ |.|.
T Consensus       227 dLe~HfR~~H-flCE  240 (669)
T KOG2231|consen  227 DLEEHFRKGH-FLCE  240 (669)
T ss_pred             HHHHHhhhcC-cccc
Confidence            7777777555 4554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.24  E-value=0.0023  Score=34.37  Aligned_cols=24  Identities=29%  Similarity=0.378  Sum_probs=18.5

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |+|+.|+.... ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999998887 8899999988753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.21  E-value=0.0021  Score=56.65  Aligned_cols=24  Identities=21%  Similarity=0.497  Sum_probs=22.1

Q ss_pred             CcceecCC--CccccCChHHHHhHhh
Q 038358          176 SCRFECNS--CKKVFGSHQALGGHRA  199 (312)
Q Consensus       176 ~k~~~C~~--C~~~F~~~~~L~~H~~  199 (312)
                      +|||+|++  |.|++.....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhh
Confidence            69999987  9999999999999976

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.20  E-value=0.01  Score=53.03  Aligned_cols=138  Identities=18%  Similarity=0.178  Sum_probs=85.6

Q ss_pred             cccCcc--ccccCCChHHHHHHHHhCCCCCCCCCCCC---CCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           78 TRPCSE--CGKKFWSWKALFGHMRCHPERQWRGINPP---PNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        78 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~C~~c~---~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      .|.|+.  |..+......|+.|.+..+++ +.|..|-   +.|.|                                   
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~-~~C~~C~~nKk~F~~-----------------------------------  194 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF-VLCSECIGNKKDFWN-----------------------------------  194 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc-EEhHhhhcCcccCcc-----------------------------------
Confidence            477876  777777788899998866654 3344431   12222                                   


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcc----eecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCc
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCR----FECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGI  228 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~----~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~  228 (312)
                        .-..-++..|+.|...-..  +.-    -.|..|...|..-..|.+|.+..+.         .|.+|+++- ..+.-+
T Consensus       195 --E~~lF~~~~Lr~H~~~G~~--e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE---------~ChICD~v~-p~~~QY  260 (493)
T COG5236         195 --EIRLFRSSTLRDHKNGGLE--EEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE---------ACHICDMVG-PIRYQY  260 (493)
T ss_pred             --ceeeeecccccccccCCcc--ccCcCCCchhhhccceecChHHHHHHHHhhhh---------hhhhhhccC-ccchhh
Confidence              2223345567777654332  212    2588899999999999999886543         678887764 223234


Q ss_pred             cccchhhHhHhhhcCceecCc--cc----cccCChhhHhhhhhh
Q 038358          229 VKENVDDERKMMMVLGHKCSI--CL----RVFSSGQALGGHKRC  266 (312)
Q Consensus       229 ~~~~~~l~~H~~~H~~~~C~~--C~----k~F~~~~~L~~H~~~  266 (312)
                      |+.-..|.+|.+.-+ |.|.+  |-    ..|.....|..|+-.
T Consensus       261 FK~Y~~Le~HF~~~h-y~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         261 FKSYEDLEAHFRNAH-YCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             hhCHHHHHHHhhcCc-eEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            444557778875322 44432  22    468899999999744

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.14  E-value=0.0031  Score=35.02  Aligned_cols=22  Identities=32%  Similarity=0.584  Sum_probs=20.2

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.02  E-value=0.0048  Score=33.41  Aligned_cols=23  Identities=39%  Similarity=0.732  Sum_probs=20.7

Q ss_pred             eecCCCccccCChHHHHhHhhhc
Q 038358          179 FECNSCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H  201 (312)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999998754

>TIGR00622 ssl1 transcription factor ssl1

Probab=95.61  E-value=0.028  Score=42.49  Aligned_cols=85  Identities=16%  Similarity=0.139  Sum_probs=54.1

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCccc-------ccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc-eec
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFA-------ITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG-HKC  247 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~-------~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~-~~C  247 (312)
                      +-|..|++||.+......|.+--.---..++|..       ....|-.|...|......        ..-...-.+ |.|
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~--------~~~~~~~~~~y~C   84 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVS--------PFDELKDSHRYVC   84 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccc--------cccccccccceeC
Confidence            6789999999999888888764211011111110       112499999999863200        000000111 999


Q ss_pred             CccccccCChhhHhhhhhhcc
Q 038358          248 SICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       248 ~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      +.|...|-..-++-.|...|.
T Consensus        85 ~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        85 AVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             CCCCCccccccchhhhhhccC
Confidence            999999999999888988885

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=95.57  E-value=0.021  Score=56.07  Aligned_cols=117  Identities=12%  Similarity=0.061  Sum_probs=71.2

Q ss_pred             cccccccchhccCCC----CCCCccccCchhHHhHHhhhcCCCCcceecCCC---------ccccCChHHHHhHhhhc-C
Q 038358          137 HEVAACLLMLANGDV----GVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC---------KKVFGSHQALGGHRASH-K  202 (312)
Q Consensus       137 ~~C~~C~~~f~~~~~----~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C---------~~~F~~~~~L~~H~~~H-~  202 (312)
                      +.|.+|+.+|.-...    .+| ..|.....|+.|+...+    +.+.|.+|         .....+...|..|++.- .
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c-~~~~s~~~Lk~H~~~~H----~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~  174 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHC-TEFKSVENLKNHMRDQH----KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP  174 (669)
T ss_pred             hhcCccccchhhhcccCCCccc-cchhHHHHHHHHHHHhh----hhhccccccccceeeeeeeehehHHHHHHHHhcCCC
Confidence            556666655521111    345 57778899999995432    24444443         22334567888887742 2


Q ss_pred             CCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCcc------ccccCChhhHhhhhhhcc
Q 038358          203 HVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSIC------LRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       203 ~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C------~k~F~~~~~L~~H~~~H~  268 (312)
                      +++- ....-.|..|...|..        ...|.+|++.++. .|..|      +.-|.....|..|.|.+|
T Consensus       175 d~~s-~rGhp~C~~C~~~fld--------~~el~rH~~~~h~-~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  175 DDES-CRGHPLCKFCHERFLD--------DDELYRHLRFDHE-FCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cccc-ccCCccchhhhhhhcc--------HHHHHHhhcccee-heeecCcccccchhcccchHHHHHhhhcC
Confidence            2221 1111279999999998        4588899987664 45455      455677778888877654

>PRK04860 hypothetical protein; Provisional

Probab=95.54  E-value=0.007  Score=49.21  Aligned_cols=36  Identities=11%  Similarity=0.285  Sum_probs=19.7

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCc
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHD  222 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~  222 (312)
                      +|.|. |+.   ....+.+|.++|+++++|     .|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~Y-----rC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVY-----RCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccE-----ECCCCCceeE
Confidence            45555 554   444555555566555553     5555555543

>PRK04860 hypothetical protein; Provisional

Probab=95.36  E-value=0.01  Score=48.26  Aligned_cols=34  Identities=18%  Similarity=0.366  Sum_probs=28.0

Q ss_pred             CCccccCchhHHhHHhhhcCCCCcceecCCCccccCChH
Q 038358          154 GTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQ  192 (312)
Q Consensus       154 C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~  192 (312)
                      |++   ....+++|.++|.+  +++|.|..|+..|....
T Consensus       124 C~~---~~~~~rrH~ri~~g--~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        124 CQE---HQLTVRRHNRVVRG--EAVYRCRRCGETLVFKG  157 (160)
T ss_pred             CCC---eeCHHHHHHHHhcC--CccEECCCCCceeEEec
Confidence            555   67788999999998  89999999999887543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.06  E-value=0.015  Score=31.15  Aligned_cols=23  Identities=22%  Similarity=0.517  Sum_probs=18.2

Q ss_pred             eecCCCccccCChHHHHhHhhhcC
Q 038358          179 FECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      |+|+.|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999888 889999998754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.94  E-value=0.013  Score=32.40  Aligned_cols=22  Identities=41%  Similarity=0.783  Sum_probs=20.1

Q ss_pred             eecCCCccccCChHHHHhHhhh
Q 038358          179 FECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.86  E-value=0.014  Score=54.73  Aligned_cols=57  Identities=23%  Similarity=0.379  Sum_probs=51.7

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHh--hhcCCCC--cceecC--CCccccCChHHHHhHhhhcCCCCC
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE--VNLGGVS--CRFECN--SCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~--~H~~~~~--k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      ++.|..|            ...|.....|..|.+  .|.+  +  +++.|+  .|++.|.....+..|...|.+..+
T Consensus       289 ~~~~~~~------------~~~~s~~~~l~~~~~~~~h~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         289 PIKSKQC------------NISFSRSSPLTRHLRSVNHSG--ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             CCCCccc------------cCCcccccccccccccccccc--ccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            5777777            789999999999999  8998  8  999999  899999999999999999988775

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.59  E-value=0.028  Score=35.82  Aligned_cols=29  Identities=10%  Similarity=0.091  Sum_probs=21.3

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcc
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCR  178 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~  178 (312)
                      |..|++|            +..+.+..+|++|+.++++  .||
T Consensus        24 PatCP~C------------~a~~~~srnLrRHle~~H~--~k~   52 (54)
T PF09237_consen   24 PATCPIC------------GAVIRQSRNLRRHLEIRHF--KKP   52 (54)
T ss_dssp             -EE-TTT--------------EESSHHHHHHHHHHHTT--TS-
T ss_pred             CCCCCcc------------hhhccchhhHHHHHHHHhc--ccC
Confidence            7888888            7799999999999988877  665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.19  E-value=0.027  Score=30.60  Aligned_cols=21  Identities=33%  Similarity=0.649  Sum_probs=15.2

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      ..|+.||+.| ....|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3688888888 66677777654

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=93.50  E-value=0.056  Score=56.44  Aligned_cols=50  Identities=14%  Similarity=0.107  Sum_probs=33.2

Q ss_pred             cccCCCCCCCCcCCCCCccccchhhHhHhhh--cCc--eecCccccccCChhhHhhhhhhcc
Q 038358          211 TRSSDGCEIDHDHCSDGIVKENVDDERKMMM--VLG--HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       211 ~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~--H~~--~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      ++.|..|++--+-..        +|+.|+..  |..  .-|-.|+-.+.....|..|.+.+-
T Consensus       589 ~~~C~vc~yetniar--------nlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~lp~  642 (1406)
T KOG1146|consen  589 SWRCEVCSYETNIAR--------NLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGRLPF  642 (1406)
T ss_pred             Ccchhhhcchhhhhh--------ccccccccCCCCCChHHHhhhcchhhccccccCcCCCCC
Confidence            468888887665522        66666642  222  557777788888888877777773

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.12  E-value=0.073  Score=28.89  Aligned_cols=21  Identities=24%  Similarity=0.528  Sum_probs=17.1

Q ss_pred             eecCCCccccCChHHHHhHhhh
Q 038358          179 FECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      ..|+.||+.| ..+.|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67788888764

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.90  E-value=0.18  Score=29.47  Aligned_cols=23  Identities=22%  Similarity=0.514  Sum_probs=20.8

Q ss_pred             ceecCCCccccCChHHHHhHhhh
Q 038358          178 RFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      +|.|++|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            68899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.89  E-value=0.16  Score=29.71  Aligned_cols=22  Identities=18%  Similarity=0.489  Sum_probs=19.7

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |.|++|++.|.....+..|++.
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            7899999999999999999854

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=88.95  E-value=0.29  Score=26.83  Aligned_cols=24  Identities=17%  Similarity=0.393  Sum_probs=16.4

Q ss_pred             cCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccC
Q 038358          213 SSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFS  255 (312)
Q Consensus       213 ~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~  255 (312)
                      .|+.|++.-....                   -.|+.||..|.
T Consensus         2 ~CP~C~~~V~~~~-------------------~~Cp~CG~~F~   25 (26)
T PF10571_consen    2 TCPECGAEVPESA-------------------KFCPHCGYDFE   25 (26)
T ss_pred             cCCCCcCCchhhc-------------------CcCCCCCCCCc
Confidence            4777777665533                   56888888775

Several members are annotated as putative helicases.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=88.21  E-value=0.15  Score=43.49  Aligned_cols=25  Identities=40%  Similarity=0.659  Sum_probs=17.5

Q ss_pred             eecCccccccCChhhHhhh-hhhccC
Q 038358          245 HKCSICLRVFSSGQALGGH-KRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H-~~~H~~  269 (312)
                      |+|.+|.|...+---|..| |.+|.+
T Consensus        35 fkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   35 FKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             ceeeeehhhhccCCCceeehhhhhhh
Confidence            7777777777777677777 566654

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=87.29  E-value=0.33  Score=41.84  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=38.9

Q ss_pred             cccCCCCCCCCcCCCCCccccchhhHhHhhhcCc--eecCccccccCChhhHhhhhhhccC
Q 038358          211 TRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG--HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       211 ~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~--~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      .|.|..||....-         -.+.+|+..-++  |.|-.|++.|.. ..+..|...-++
T Consensus         3 ~FtCnvCgEsvKK---------p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCITE   53 (276)
T KOG2186|consen    3 FFTCNVCGESVKK---------PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCITE   53 (276)
T ss_pred             EEehhhhhhhccc---------cchHHHHHhccCCeeEEeeccccccc-chhhhhhhhcch
Confidence            4789999987665         267789976666  999999999999 677889877654

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.21  E-value=0.18  Score=43.20  Aligned_cols=49  Identities=18%  Similarity=0.248  Sum_probs=31.5

Q ss_pred             CcceecCCCccccCChHHHHhHhhh---c-------CCCCCcccccccCCCCCCCCcCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRAS---H-------KHVKGCFAITRSSDGCEIDHDHC  224 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~---H-------~~~k~y~~~~~~C~~C~~~f~~~  224 (312)
                      ++.+.|++|+..|.++.-.....++   .       .+..|+.=.+..|+.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            5788999999999988665555543   2       23333322345777777776653

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=86.85  E-value=0.17  Score=42.09  Aligned_cols=76  Identities=20%  Similarity=0.328  Sum_probs=47.0

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhh----------hcCc
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMM----------MVLG  244 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~----------~H~~  244 (312)
                      ..|.|.+  |...|.....+..|-.+-++.        .|..|.+.|.+.-        -|..|+-          +-.|
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~--------sCs~C~r~~Pt~h--------LLd~HI~E~HDs~Fqa~veRG  141 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN--------SCSFCKRAFPTGH--------LLDAHILEWHDSLFQALVERG  141 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc--------hhHHHHHhCCchh--------hhhHHHHHHHHHHHHHHHHcC
Confidence            3466665  666777666666665543332        6777777777644        3444432          1222


Q ss_pred             ---eec--CccccccCChhhHhhhh-hhcc
Q 038358          245 ---HKC--SICLRVFSSGQALGGHK-RCHW  268 (312)
Q Consensus       245 ---~~C--~~C~k~F~~~~~L~~H~-~~H~  268 (312)
                         |+|  +-|+..|.+...-..|+ ++|.
T Consensus       142 ~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  142 QDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             ccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence               888  44888888888888886 5663

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=86.51  E-value=0.41  Score=34.23  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=22.2

Q ss_pred             ccCCCCCCCCcCCCCCccccchhhHhHhhhcCc-eecCccccccCCh
Q 038358          212 RSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG-HKCSICLRVFSSG  257 (312)
Q Consensus       212 ~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~-~~C~~C~k~F~~~  257 (312)
                      |.|+.|++.                .+.|+-+| ..|..||..|.-.
T Consensus        36 ~~Cp~C~~~----------------~VkR~a~GIW~C~kCg~~fAGg   66 (89)
T COG1997          36 HVCPFCGRT----------------TVKRIATGIWKCRKCGAKFAGG   66 (89)
T ss_pred             CcCCCCCCc----------------ceeeeccCeEEcCCCCCeeccc
Confidence            488888864                34566677 8999999988743

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.12  E-value=0.49  Score=44.20  Aligned_cols=55  Identities=16%  Similarity=0.206  Sum_probs=39.3

Q ss_pred             cceecCCCccccCChHHHHhHhh--hcCCC--CCcccccccCC--CCCCCCcCCCCCccccchhhHhHhhhcCc
Q 038358          177 CRFECNSCKKVFGSHQALGGHRA--SHKHV--KGCFAITRSSD--GCEIDHDHCSDGIVKENVDDERKMMMVLG  244 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~--~H~~~--k~y~~~~~~C~--~C~~~f~~~~~~~~~~~~~l~~H~~~H~~  244 (312)
                      .++.|..|...|.....|..|.+  .|.++  ++     +.|.  .|++.|....        .+.+|...|.+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~-----~~~p~~~~~~~~~~~~--------~~~~~~~~~~~  348 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP-----FSCPYSLCGKLFSRND--------ALKRHILLHTS  348 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc-----eeeeccCCCccccccc--------cccCCcccccC
Confidence            47889999999999999999998  78888  77     3555  4555555533        44555555555

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=85.05  E-value=0.29  Score=41.77  Aligned_cols=43  Identities=23%  Similarity=0.375  Sum_probs=35.0

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhH-hhhcCC
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGH-RASHKH  203 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~  203 (312)
                      ++.|....-|.+|++      .|-|+|.+|.+...+-..|..| +++|..
T Consensus        17 nrefddekiliqhqk------akhfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   17 NREFDDEKILIQHQK------AKHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             ccccchhhhhhhhhh------hccceeeeehhhhccCCCceeehhhhhhh
Confidence            888988888888874      5679999999998888888888 456643

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=83.49  E-value=0.65  Score=46.87  Aligned_cols=32  Identities=6%  Similarity=-0.124  Sum_probs=20.6

Q ss_pred             CCCCCCCCCCCCCCcchhhHHHhhhccCc-cccccccc
Q 038358          107 RGINPPPNFRRPASPVKEVTSVENVMTVE-DHEVAACL  143 (312)
Q Consensus       107 ~C~~c~~~f~c~~c~~~~~~~~~~~~~~~-~~~C~~C~  143 (312)
                      .|..||..++|+.|...     +..|... ...|.+||
T Consensus       437 ~C~~Cg~v~~Cp~Cd~~-----lt~H~~~~~L~CH~Cg  469 (730)
T COG1198         437 LCRDCGYIAECPNCDSP-----LTLHKATGQLRCHYCG  469 (730)
T ss_pred             ecccCCCcccCCCCCcc-----eEEecCCCeeEeCCCC
Confidence            69999999999988421     2222222 56677774

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=83.35  E-value=1.7  Score=39.21  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=58.8

Q ss_pred             ceecCCCccccCChHHHHhHhhh--cCCCCC----c---c----------------------------------------
Q 038358          178 RFECNSCKKVFGSHQALGGHRAS--HKHVKG----C---F----------------------------------------  208 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~--H~~~k~----y---~----------------------------------------  208 (312)
                      .++|-.|.+.|..+..|+.||+.  |....|    |   +                                        
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            47999999999999999999984  643333    1   0                                        


Q ss_pred             --cccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc------------------------------eecCccccccCC
Q 038358          209 --AITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG------------------------------HKCSICLRVFSS  256 (312)
Q Consensus       209 --~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~------------------------------~~C~~C~k~F~~  256 (312)
                        +.+.+|-.|.....+.        ..|..||.+-+.                              -.|-.|+..|-.
T Consensus       275 a~a~~v~CLfC~~~~en~--------~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~  346 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENP--------VFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWK  346 (423)
T ss_pred             CCccceEEEeeccchhhH--------HHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccC
Confidence              0113788888777663        367777754111                              357889999999


Q ss_pred             hhhHhhhhhhc
Q 038358          257 GQALGGHKRCH  267 (312)
Q Consensus       257 ~~~L~~H~~~H  267 (312)
                      ...|..||.-+
T Consensus       347 e~~l~~hm~e~  357 (423)
T KOG2482|consen  347 EPGLLIHMVED  357 (423)
T ss_pred             cchhhhhcccc
Confidence            99999998653

>PHA00626 hypothetical protein

Probab=81.78  E-value=0.88  Score=29.62  Aligned_cols=13  Identities=23%  Similarity=0.128  Sum_probs=11.3

Q ss_pred             eecCccccccCCh
Q 038358          245 HKCSICLRVFSSG  257 (312)
Q Consensus       245 ~~C~~C~k~F~~~  257 (312)
                      |+|+.||..|+..
T Consensus        24 YkCkdCGY~ft~~   36 (59)
T PHA00626         24 YVCCDCGYNDSKD   36 (59)
T ss_pred             eEcCCCCCeechh
Confidence            9999999988764

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=81.75  E-value=0.67  Score=48.85  Aligned_cols=75  Identities=20%  Similarity=0.328  Sum_probs=45.0

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc--eecCccccc
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG--HKCSICLRV  253 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~--~~C~~C~k~  253 (312)
                      ..+|.|..|...|.....|..|.+.-.                +.|....        ...-|.-.|-.  |-|..|...
T Consensus      1282 ~~~~~~~~~~~~~~~~~~l~~~~~k~~----------------~~~~~~~--------~~~~~~l~~~d~~~~c~~c~~~ 1337 (1406)
T KOG1146|consen 1282 THRYLCRQCKMAFDGEAPLTAHQRKFC----------------FAGRGSG--------GSMPPPLRVPDCTYHCLACEVL 1337 (1406)
T ss_pred             chhHHHHHHHhhhcchhHHHHHHHHHH----------------hccCccc--------cCCCCcccCccccccchHHHhh
Confidence            567788888888888888887762210                0011100        11122222222  339999999


Q ss_pred             cCChhhHhhhhhhccCCCCCC
Q 038358          254 FSSGQALGGHKRCHWEKGDDP  274 (312)
Q Consensus       254 F~~~~~L~~H~~~H~~~~~~~  274 (312)
                      |.....|..||++-.++...+
T Consensus      1338 ~~~~~alqihm~~~~~~~kt~ 1358 (1406)
T KOG1146|consen 1338 LSGREALQIHMRSSAHRRKTA 1358 (1406)
T ss_pred             cchhHHHHHHHHHhhhcccCC
Confidence            999999999998644343333

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.60  E-value=0.75  Score=29.87  Aligned_cols=26  Identities=19%  Similarity=0.281  Sum_probs=23.9

Q ss_pred             CCcceecCCCccccCChHHHHhHhhh
Q 038358          175 VSCRFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       175 ~~k~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      +|..++|+-||+.|....++.+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            48899999999999999999999874

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=81.52  E-value=0.8  Score=41.27  Aligned_cols=91  Identities=22%  Similarity=0.258  Sum_probs=58.2

Q ss_pred             chhHHhHHhhhcCCCCcceecCCCc---ccc------CChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCcccc
Q 038358          161 GIQVQDTNEVNLGGVSCRFECNSCK---KVF------GSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKE  231 (312)
Q Consensus       161 ~~~L~~H~~~H~~~~~k~~~C~~C~---~~F------~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~  231 (312)
                      -..|+.|.++.++    .+-|.+|-   +.|      .++..|..|...-..+..+ .-.=.|..|...|..-.      
T Consensus       166 ~k~lk~H~K~~H~----~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GF-KGHP~C~FC~~~FYdDD------  234 (493)
T COG5236         166 LKELKKHYKAQHG----FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGF-KGHPLCIFCKIYFYDDD------  234 (493)
T ss_pred             HHHHHHHHHhhcC----cEEhHhhhcCcccCccceeeeecccccccccCCccccCc-CCCchhhhccceecChH------
Confidence            4578889887654    56677663   233      3456788887654333110 00127999999999844      


Q ss_pred             chhhHhHhhhcCceecCccccc-------cCChhhHhhhhh
Q 038358          232 NVDDERKMMMVLGHKCSICLRV-------FSSGQALGGHKR  265 (312)
Q Consensus       232 ~~~l~~H~~~H~~~~C~~C~k~-------F~~~~~L~~H~~  265 (312)
                        .|.+|+|.-+. .|.+|++.       |..-..|..|.+
T Consensus       235 --EL~~HcR~~HE-~ChICD~v~p~~~QYFK~Y~~Le~HF~  272 (493)
T COG5236         235 --ELRRHCRLRHE-ACHICDMVGPIRYQYFKSYEDLEAHFR  272 (493)
T ss_pred             --HHHHHHHhhhh-hhhhhhccCccchhhhhCHHHHHHHhh
Confidence              88899985444 34444443       778888998875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	312
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	8e-07
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-05

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 44.0 bits (104), Expect = 8e-07
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 179 FECNSCKKVFGSHQALGGHRASHK 202
           + C+ CK+ F S QALGGH   H+
Sbjct: 7   YTCSFCKREFRSAQALGGHMNVHR 30

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 245 HKCSICLRVFSSGQALGGHKRCH 267
           + CS C R F S QALGGH   H
Sbjct: 7   YTCSFCKREFRSAQALGGHMNVH 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.68
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.64
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.6
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.53
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.53
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.5
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.48
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.48
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.46
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.46
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.44
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.41
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.4
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.39
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.39
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.35
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.3
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.3
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.29
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.29
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.25
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.22
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.18
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.17
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.1
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.03
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.99
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.99
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.89
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.87
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.87
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.86
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.86
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.86
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.85
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.84
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.84
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.83
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.79
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.77
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.73
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.73
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.71
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.7
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.69
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.67
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.67
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.67
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.67
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.66
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.66
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.63
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.62
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.62
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.61
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.61
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.59
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.59
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.59
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.58
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.58
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.58
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.58
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.57
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.57
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.56
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.56
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.55
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.49
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.48
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.47
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.46
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.4
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.38
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.38
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.36
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.32
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.3
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.3
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.29
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.26
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.23
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.23
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.21
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.21
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.2
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.2
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.19
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.49
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.48
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.17
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.17
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.14
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.14
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.12
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.11
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.1
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.04
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.02
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.02
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.99
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.97
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.97
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.97
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.22
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.94
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.18
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.93
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.88
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.87
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.87
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.09
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.08
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.84
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.82
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.78
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.76
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.1
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.79
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.74
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.44
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.04
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.74
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.98
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.51
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.08
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.15
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.04
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.83
2yqq_A	56	Zinc finger HIT domain-containing protein 3; struc	88.42
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	82.38
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	81.38
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	80.04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1e-33  Score=237.53  Aligned_cols=167  Identities=25%  Similarity=0.380  Sum_probs=137.9

Q ss_pred             CCCCCcccCccccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCc-ccccccccchhccCC
Q 038358           73 GAPKITRPCSECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVE-DHEVAACLLMLANGD  150 (312)
Q Consensus        73 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~-~~~C~~C~~~f~~~~  150 (312)
                      ..++++|.|++|++.|.....|..|++.|.+ ++|.|..|++.|..    ...+..|+++|.++ +|.|++|        
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----~~~l~~H~~~h~~~~~~~C~~C--------   83 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD----KKDLTRHQRTHTGEKPYKCPEC--------   83 (190)
T ss_dssp             ---------------CCSSHHHHHGGGCC---CCEECTTTCCEESS----HHHHHHHHHHHHCCCCEECTTT--------
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCC----HHHHHHHHHhcCCCCCccCccc--------
Confidence            3445689999999999999999999999985 78999999888876    57788899888776 8999999        


Q ss_pred             CCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccc
Q 038358          151 VGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVK  230 (312)
Q Consensus       151 ~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~  230 (312)
                          ++.|.....|..|+++|.+  +++|.|++|++.|.+...|..|+++|+++++|     +|+.|++.|...      
T Consensus        84 ----~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-----~C~~C~~~f~~~------  146 (190)
T 2i13_A           84 ----GKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTGEKPY-----KCPECGKSFSRE------  146 (190)
T ss_dssp             ----CCEESCHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHCCCCE-----ECTTTCCEESCH------
T ss_pred             ----CCccCCHHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCe-----ECCCCCcccCCH------
Confidence                7899999999999999998  99999999999999999999999999999995     999999999994      


Q ss_pred             cchhhHhHhhhcCc---eecCccccccCChhhHhhhhhhccCC
Q 038358          231 ENVDDERKMMMVLG---HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       231 ~~~~l~~H~~~H~~---~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                        ..|..|+++|++   |.|++|++.|.+...|..|+++|+|+
T Consensus       147 --~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          147 --DNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             --HHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             --HHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence              499999999998   99999999999999999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=1.4e-30  Score=218.33  Aligned_cols=165  Identities=18%  Similarity=0.250  Sum_probs=148.5

Q ss_pred             CCCcccC--ccccccCCChHHHHHHHHhCCC-CCCCC--CCCCCCCCCCCCcchhhHHHhhhccCc-ccccc--cccchh
Q 038358           75 PKITRPC--SECGKKFWSWKALFGHMRCHPE-RQWRG--INPPPNFRRPASPVKEVTSVENVMTVE-DHEVA--ACLLML  146 (312)
Q Consensus        75 ~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~-~~~~C--~~c~~~f~c~~c~~~~~~~~~~~~~~~-~~~C~--~C~~~f  146 (312)
                      ..++|.|  ..|++.|.....|..|+++|.+ ++|.|  ..|++.|..    ...+..|+++|.++ +|.|+  .|    
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~----~~~l~~H~~~h~~~~~~~C~~~~C----   80 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTS----LHHLTRHSLTHTGEKNFTCDSDGC----   80 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSS----HHHHHHHHTTTTTCCCEECCSSSC----
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCC----HHHHHHHHHHccCCCceeCCCCCC----
Confidence            3457999  6899999999999999999985 78999  889998887    57788999999876 89999  78    


Q ss_pred             ccCCCCCCCccccCchhHHhHH-hhh-cCCCCcceec--CCCccccCChHHHHhHhhhcCCCCCcccccccCCC--CCCC
Q 038358          147 ANGDVGVGTGSFQQGIQVQDTN-EVN-LGGVSCRFEC--NSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDG--CEID  220 (312)
Q Consensus       147 ~~~~~~~C~k~F~~~~~L~~H~-~~H-~~~~~k~~~C--~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~--C~~~  220 (312)
                              ++.|.....|..|+ +.| .+  +++|.|  ++|++.|.+...|..|+++|++++||     .|+.  |++.
T Consensus        81 --------~~~f~~~~~l~~H~~~~h~~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~~~C~k~  145 (190)
T 1tf6_A           81 --------DLRFTTKANMKKHFNRFHNIK--ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY-----ECPHEGCDKR  145 (190)
T ss_dssp             --------CCEESCHHHHHHHHHTTSSTT--TSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSS-----BCCSSSCCCB
T ss_pred             --------CCccCCHHHHHHHHHHhcCCC--cceeeCCCCCCccccCCHHHHHHHHHHhCCCCCc-----cCCCCCCCch
Confidence                    88999999999999 667 34  899999  99999999999999999999999995     9987  9999


Q ss_pred             CcCCCCCccccchhhHhHhhhcCceecCc---cccccCChhhHhhhhhhccCC
Q 038358          221 HDHCSDGIVKENVDDERKMMMVLGHKCSI---CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       221 f~~~~~~~~~~~~~l~~H~~~H~~~~C~~---C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |...        ..|.+|+++|++|.|+.   |++.|.+...|..|+++|+++
T Consensus       146 F~~~--------~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          146 FSLP--------SRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CSSH--------HHHHHHHTSSCSCCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             hcCH--------HHHHHHHHHhCCCcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9994        49999999999999999   999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=4.3e-27  Score=190.39  Aligned_cols=140  Identities=17%  Similarity=0.272  Sum_probs=124.6

Q ss_pred             CcccCccccccCCChHHHHHHHH---hCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           77 ITRPCSECGKKFWSWKALFGHMR---CHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        77 ~~~~C~~C~k~f~~~~~L~~H~~---~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      .+|.|+.|++.|.+...|..|++   +|.+ ++|.|..|                          .|..|          
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c--------------------------~C~~c----------   45 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG--------------------------GCSRE----------   45 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBT--------------------------TCTTT----------
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCC--------------------------Cccch----------
Confidence            46899999999999999999998   5664 45555543                          13444          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCC--CCCCCcCCCCCc
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDG--CEIDHDHCSDGI  228 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~--C~~~f~~~~~~~  228 (312)
                        ++.|.....|..|+++|.+  +++|.|++  |++.|.....|..|+++|+++++|     .|+.  |++.|.+.+   
T Consensus        46 --~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-----~C~~~~C~~~f~~~~---  113 (155)
T 2gli_A           46 --LRPFKAQYMLVVHMRRHTG--EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY-----MCEHEGCSKAFSNAS---  113 (155)
T ss_dssp             --TCCCSSHHHHHHHTHHHHC--CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCE-----ECCSTTCCCEESSSS---
T ss_pred             --hhhhhhHHHHHHHHHhcCC--CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCe-----eCCCCCCCCccCCHH---
Confidence              7899999999999999998  99999985  999999999999999999999995     9998  999999966   


Q ss_pred             cccchhhHhHh-hhcCc---eecCc--cccccCChhhHhhhhhhccC
Q 038358          229 VKENVDDERKM-MMVLG---HKCSI--CLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       229 ~~~~~~l~~H~-~~H~~---~~C~~--C~k~F~~~~~L~~H~~~H~~  269 (312)
                           .|.+|+ ++|++   |.|++  |++.|.+.+.|..|+++|+|
T Consensus       114 -----~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          114 -----DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             -----TTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             -----HHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                 889999 89998   99998  99999999999999999985

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=2.5e-27  Score=198.44  Aligned_cols=150  Identities=19%  Similarity=0.306  Sum_probs=114.7

Q ss_pred             hHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHH
Q 038358           91 WKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTN  168 (312)
Q Consensus        91 ~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~  168 (312)
                      ...|..|++.|.+ ++|.|..|++.|..    ...+..|++.|.++ +|+|++|            ++.|.....|..|+
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~----~~~l~~H~~~h~~~~~~~C~~C------------~~~f~~~~~l~~H~   69 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSR----SDHLAEHQRTHTGEKPYKCPEC------------GKSFSDKKDLTRHQ   69 (190)
T ss_dssp             -------------------------CCS----SHHHHHGGGCC---CCEECTTT------------CCEESSHHHHHHHH
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCC----HHHHHHHHHHcCCCCCccCCCc------------CchhCCHHHHHHHH
Confidence            4568889999885 78999999988876    46788899988876 8999999            78999999999999


Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---e
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---H  245 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~  245 (312)
                      ++|.+  +++|.|++|++.|.+...|..|+++|.++++|     .|+.|++.|.+        ...|..|+++|++   |
T Consensus        70 ~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-----~C~~C~~~f~~--------~~~l~~H~~~h~~~~~~  134 (190)
T 2i13_A           70 RTHTG--EKPYKCPECGKSFSQRANLRAHQRTHTGEKPY-----ACPECGKSFSQ--------LAHLRAHQRTHTGEKPY  134 (190)
T ss_dssp             HHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHTCCCE-----ECTTTCCEESS--------HHHHHHHHHHHHCCCCE
T ss_pred             HhcCC--CCCccCcccCCccCCHHHHHHHHHhcCCCCCC-----cCCCCCCccCC--------HHHHHHHHHHhCCCCCe
Confidence            99998  99999999999999999999999999999995     99999999999        4499999999988   9


Q ss_pred             ecCccccccCChhhHhhhhhhccCCC
Q 038358          246 KCSICLRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       246 ~C~~C~k~F~~~~~L~~H~~~H~~~~  271 (312)
                      .|++|++.|.+...|..|+++|+++.
T Consensus       135 ~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A          135 KCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             ECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            99999999999999999999998753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=1.9e-23  Score=174.72  Aligned_cols=136  Identities=14%  Similarity=0.211  Sum_probs=122.7

Q ss_pred             CCCCCC--CCCCCCCCCCCCcchhhHHHhhhccCc-cccc--ccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCc
Q 038358          103 ERQWRG--INPPPNFRRPASPVKEVTSVENVMTVE-DHEV--AACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSC  177 (312)
Q Consensus       103 ~~~~~C--~~c~~~f~c~~c~~~~~~~~~~~~~~~-~~~C--~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k  177 (312)
                      .++|.|  ..|++.|..    ...+..|+++|.++ +|.|  +.|            ++.|.....|..|+++|.+  ++
T Consensus        10 ~~~~~C~~~~C~~~f~~----~~~L~~H~~~h~~~~~~~C~~~~C------------~~~f~~~~~l~~H~~~h~~--~~   71 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNK----NWKLQAHLCKHTGEKPFPCKEEGC------------EKGFTSLHHLTRHSLTHTG--EK   71 (190)
T ss_dssp             CCCCBCSSTTTCCBCSS----HHHHHHHHHHHHCCCSSCCSSTTC------------CCCCSSHHHHHHHHTTTTT--CC
T ss_pred             CcceeCCCCCCcchhCC----HHHHHHHHHhcCCCCCccCCCCCC------------ChhhCCHHHHHHHHHHccC--CC
Confidence            468888  688888876    56788899988876 8999  889            8899999999999999998  99


Q ss_pred             ceecC--CCccccCChHHHHhHh-hhc-CCCCCcccccccC--CCCCCCCcCCCCCccccchhhHhHhhhcCc---eecC
Q 038358          178 RFECN--SCKKVFGSHQALGGHR-ASH-KHVKGCFAITRSS--DGCEIDHDHCSDGIVKENVDDERKMMMVLG---HKCS  248 (312)
Q Consensus       178 ~~~C~--~C~~~F~~~~~L~~H~-~~H-~~~k~y~~~~~~C--~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C~  248 (312)
                      +|.|+  .|++.|.+...|..|+ +.| .++++|     .|  +.|++.|.+.        ..|..|+++|++   |.|+
T Consensus        72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~-----~C~~~~C~k~f~~~--------~~L~~H~~~H~~~~~~~C~  138 (190)
T 1tf6_A           72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVY-----VCHFENCGKAFKKH--------NQLKVHQFSHTQQLPYECP  138 (190)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCC-----EECSSSSCEECSSH--------HHHHHHHGGGSSSCSSBCC
T ss_pred             ceeCCCCCCCCccCCHHHHHHHHHHhcCCCccee-----eCCCCCCccccCCH--------HHHHHHHHHhCCCCCccCC
Confidence            99999  8999999999999999 677 467775     99  9999999994        499999999998   9998


Q ss_pred             c--cccccCChhhHhhhhhhccC
Q 038358          249 I--CLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       249 ~--C~k~F~~~~~L~~H~~~H~~  269 (312)
                      +  |++.|.+.+.|..|+++|++
T Consensus       139 ~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          139 HEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             SSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCCCCchhcCHHHHHHHHHHhCC
Confidence            8  99999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=4.8e-24  Score=168.43  Aligned_cols=107  Identities=12%  Similarity=0.121  Sum_probs=95.4

Q ss_pred             hhHHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcC
Q 038358          124 EVTSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       124 ~~~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      +...++.+|.|+ +|+|++|            ++.|.....|..|+++|++  ++||.|++|++.|.....|..|+++|+
T Consensus         9 h~~h~~~~h~Gek~y~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~   74 (133)
T 2lt7_A            9 HDDHYELIVDGRVYYICIVC------------KRSYVCLTSLRRHFNIHSW--EKKYPCRYCEKVFPLAEYRTKHEIHHT   74 (133)
T ss_dssp             CSSEEEEEETTEEEEEETTT------------CCEESCHHHHHHHHHHHHC--CSCEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             HHhhceeecCCCcCeECCCC------------CCCcCCHHHHHHHHHHcCC--CCCeeCCccCeecccccchhhhccccC
Confidence            344556678777 8999999            8899999999999999999  999999999999999999999999999


Q ss_pred             CCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---------eecCccccccCCh
Q 038358          203 HVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---------HKCSICLRVFSSG  257 (312)
Q Consensus       203 ~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---------~~C~~C~k~F~~~  257 (312)
                      +++||     .|++|++.|...+        .|..|+++|++         |+|.+|++.|...
T Consensus        75 ~~k~~-----~C~~C~k~F~~~~--------~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           75 GERRY-----QCLACGKSFINYQ--------FMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             TCCCE-----EESSSCCEESSHH--------HHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCccc-----cCCCCCCCcCCHH--------HHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99995     9999999999944        99999998864         9999999988643

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.2e-22  Score=156.17  Aligned_cols=112  Identities=25%  Similarity=0.372  Sum_probs=79.4

Q ss_pred             CCcccCccccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCC
Q 038358           76 KITRPCSECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVG  154 (312)
Q Consensus        76 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C  154 (312)
                      ..+|.|.+|++.|.....|..|+++|.+ ++|.                               |++|            
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------------------------------C~~C------------   41 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFE-------------------------------CPKC------------   41 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCB-------------------------------CTTT------------
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeE-------------------------------CCCC------------
Confidence            3457777777777777777777777664 2322                               2222            


Q ss_pred             CccccCchhHHhHHhh---hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCcccc
Q 038358          155 TGSFQQGIQVQDTNEV---NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKE  231 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~---H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~  231 (312)
                      ++.|.....|..|++.   |.+  +++|.|++|++.|.....|..|+++|++++|                         
T Consensus        42 ~~~f~~~~~l~~H~~~~~~~~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------------------------   94 (124)
T 2dlq_A           42 GKCYFRKENLLEHEARNCMNRS--EQVFTCSVCQETFRRRMELRLHMVSHTGEMP-------------------------   94 (124)
T ss_dssp             CCBCSSHHHHHHHHHHCCCCSC--CCCEECSSSCCEESSHHHHHHHHHHHSSSCS-------------------------
T ss_pred             CchhcCHHHHHHHHhhhhcCCC--CCCeECCCCCCccCCHHHHHHHHHHcCCCCC-------------------------
Confidence            6677777777777764   344  6777777777777777777777777777766                         


Q ss_pred             chhhHhHhhhcCceecCccccccCChhhHhhhhh-hccCC
Q 038358          232 NVDDERKMMMVLGHKCSICLRVFSSGQALGGHKR-CHWEK  270 (312)
Q Consensus       232 ~~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~-~H~~~  270 (312)
                                   |.|++|++.|.+...|..|++ .|.++
T Consensus        95 -------------~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           95 -------------YKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             -------------EECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             -------------ccCCCccchhCCHHHHHHHHHHHCCCC
Confidence                         899999999999999999997 56554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=8.1e-23  Score=157.59  Aligned_cols=111  Identities=23%  Similarity=0.477  Sum_probs=82.7

Q ss_pred             CCcccCcc--ccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           76 KITRPCSE--CGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        76 ~~~~~C~~--C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      +++|.|.+  |++.|.....|..|+++|.+ ++|.|...                             .|          
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~-----------------------------~C----------   44 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFK-----------------------------DC----------   44 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCST-----------------------------TC----------
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCC-----------------------------CC----------
Confidence            45678876  88888888888888887764 33222200                             23          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccc
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                        ++.|.....|..|+++|.+  +++|.|++|++.|.....|..|+++|+++++                          
T Consensus        45 --~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------   94 (119)
T 2jp9_A           45 --ERRFSRSDQLKRHQRRHTG--VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP--------------------------   94 (119)
T ss_dssp             --CCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHTCCC--------------------------
T ss_pred             --cCccCCHHHHHHHHHHcCC--CCCccCCccCchhCCHHHHHHHHHHhcCCCC--------------------------
Confidence              7778888888888888877  7888888888888888888888888888777                          


Q ss_pred             hhhHhHhhhcCceec--CccccccCChhhHhhhhhhc
Q 038358          233 VDDERKMMMVLGHKC--SICLRVFSSGQALGGHKRCH  267 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C--~~C~k~F~~~~~L~~H~~~H  267 (312)
                                  |.|  +.|++.|.+...|..|+++|
T Consensus        95 ------------~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           95 ------------FSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ------------EECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ------------eeCCCCCCccccCCHHHHHHHHhcC
Confidence                        677  67888888888888888776

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.3e-21  Score=158.12  Aligned_cols=121  Identities=23%  Similarity=0.383  Sum_probs=98.7

Q ss_pred             CCCcccCccccccCCChHHHHHHHHh-CCCCC-CCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           75 PKITRPCSECGKKFWSWKALFGHMRC-HPERQ-WRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        75 ~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~-~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      ....|.|..|++.|.+...|..|++. |.+.+ ...      +.|                 ..|.|.+|          
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~------~~~-----------------~~~~C~~C----------   68 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN------HVC-----------------YWEECPRE----------   68 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSS------CCC-----------------CBTTCTTS----------
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCC------ccc-----------------cccCCCCc----------
Confidence            34579999999999999999999997 76532 111      111                 23566666          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccc
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVK  230 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~  230 (312)
                        ++.|.....|..|+++|++  +++|.|.+  |++.|.....|..|+++|+++++                        
T Consensus        69 --~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~------------------------  120 (155)
T 2rpc_A           69 --GKSFKAKYKLVNHIRVHTG--EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP------------------------  120 (155)
T ss_dssp             --SCCCSSHHHHHHHTHHHHC--CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS------------------------
T ss_pred             --ccccCCHHHHHHHHHhcCC--CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC------------------------
Confidence              8899999999999999998  99999998  99999999999999999999998                        


Q ss_pred             cchhhHhHhhhcCceecCc--cccccCChhhHhhhhhhccCC
Q 038358          231 ENVDDERKMMMVLGHKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       231 ~~~~l~~H~~~H~~~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                                    |.|++  |++.|.+...|..|+++|+++
T Consensus       121 --------------~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          121 --------------FKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             --------------BCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             --------------ccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence                          66775  777777777888888777764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=2e-22  Score=156.75  Aligned_cols=76  Identities=22%  Similarity=0.357  Sum_probs=51.3

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                      ++.|.....|..|+++|.+  +++|.|.+  |++.|.....|..|+++|+++++                          
T Consensus        41 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------   92 (124)
T 1ubd_C           41 GKAFVESSKLKRHQLVHTG--EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP--------------------------   92 (124)
T ss_dssp             CCEESSHHHHHHHGGGTSC--CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCC--------------------------
T ss_pred             CchhCCHHHHHHHHHHcCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc--------------------------
Confidence            5566666666666666665  66666654  66666666666666666666655                          


Q ss_pred             hhhHhHhhhcCceecC--ccccccCChhhHhhhhhhccCC
Q 038358          233 VDDERKMMMVLGHKCS--ICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C~--~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                                  |.|+  .|++.|.+...|..|+++|+++
T Consensus        93 ------------~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           93 ------------YVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             ------------CCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             ------------eECCCCCCCCccCCHHHHHHHHHHHccc
Confidence                        7784  4888888888888888888765

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=6.2e-22  Score=156.27  Aligned_cols=106  Identities=16%  Similarity=0.217  Sum_probs=91.7

Q ss_pred             CCCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCC
Q 038358           74 APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGV  153 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~  153 (312)
                      .++++|.|++||+.|.....|..|+++|.++.                              +|+|++|           
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k------------------------------~~~C~~C-----------   56 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEK------------------------------KYPCRYC-----------   56 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCS------------------------------CEECSSS-----------
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCC------------------------------CeeCCcc-----------
Confidence            45678999999999999999999999998631                              2444444           


Q ss_pred             CCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcc-cccccCCCCCCCCcC
Q 038358          154 GTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCF-AITRSSDGCEIDHDH  223 (312)
Q Consensus       154 C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~-~~~~~C~~C~~~f~~  223 (312)
                       ++.|.....|..|+++|+|  ++||.|++||+.|.....|..|+++|++++|+. ...|+|..|++.|..
T Consensus        57 -~k~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           57 -EKVFPLAEYRTKHEIHHTG--ERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             -SCEESSHHHHHHHHHHHHT--CCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             -CeecccccchhhhccccCC--CccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence             8899999999999999999  999999999999999999999999999887753 235799999998876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=6.2e-21  Score=146.34  Aligned_cols=101  Identities=16%  Similarity=0.121  Sum_probs=89.9

Q ss_pred             chhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhh--cCCCCCcccccccCCCCCCCC--cCCCCCccccchhhH
Q 038358          161 GIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRAS--HKHVKGCFAITRSSDGCEIDH--DHCSDGIVKENVDDE  236 (312)
Q Consensus       161 ~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~--H~~~k~y~~~~~~C~~C~~~f--~~~~~~~~~~~~~l~  236 (312)
                      ...|..|+++|++  +++|.|++|++.|.....|..|+++  |.+++++    +.|..|++.|  ....        .|.
T Consensus         4 ~~~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~----~~C~~C~~~f~f~~~~--------~l~   69 (115)
T 2dmi_A            4 GSSGKLYGSIFTG--ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH----ETDNNNPKRWSKPRKR--------SLL   69 (115)
T ss_dssp             CCCCCCCCCCCCC--CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC----CCCCCCCSCCSSCCCC--------CCC
T ss_pred             chhhhhheeeeCC--CCCEECCccCchhcCHHHHHHHHHHhCccccCCC----ccCCCCCcccccccHH--------HHH
Confidence            4578899999998  9999999999999999999999999  8888876    5799999999  7755        788


Q ss_pred             hHhhhcCc---eecCccccccCChhhHhhhhhhccCCCCCCc
Q 038358          237 RKMMMVLG---HKCSICLRVFSSGQALGGHKRCHWEKGDDPL  275 (312)
Q Consensus       237 ~H~~~H~~---~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~  275 (312)
                      +|+++|++   |.|++|++.|.+...|..|+++|+.....+.
T Consensus        70 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             CCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             HHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            99999998   9999999999999999999999886655443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=3.2e-19  Score=143.79  Aligned_cols=108  Identities=19%  Similarity=0.252  Sum_probs=96.8

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHh---hhcCCCCcceecCCC-----ccccCChHHHHhHhhhcCCCCCc
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE---VNLGGVSCRFECNSC-----KKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~---~H~~~~~k~~~C~~C-----~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +|.|+.|            ++.|.....|..|++   +|.+  +++|.|++|     ++.|.....|..|+++|.++++|
T Consensus         3 ~~~C~~C------------~~~f~~~~~L~~H~~~~h~h~~--~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~   68 (155)
T 2gli_A            3 DCRWDGC------------SQEFDSQEQLVHHINSEHIHGE--RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH   68 (155)
T ss_dssp             BCCBTTC------------CCBCSCHHHHHHHHHHHTSSSC--SSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCC
T ss_pred             cCCcCCC------------ccccCCHHHHHHHHHhhccCCC--CcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCc
Confidence            4677777            889999999999998   6777  899998753     49999999999999999999995


Q ss_pred             ccccccCCC--CCCCCcCCCCCccccchhhHhHhhhcCc---eecCc--cccccCChhhHhhhh-hhccCC
Q 038358          208 FAITRSSDG--CEIDHDHCSDGIVKENVDDERKMMMVLG---HKCSI--CLRVFSSGQALGGHK-RCHWEK  270 (312)
Q Consensus       208 ~~~~~~C~~--C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C~~--C~k~F~~~~~L~~H~-~~H~~~  270 (312)
                           .|..  |++.|..        ...|..|+++|++   |.|++  |++.|.+...|..|+ ++|.++
T Consensus        69 -----~C~~~~C~~~f~~--------~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A           69 -----KCTFEGCRKSYSR--------LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE  126 (155)
T ss_dssp             -----CCCSTTCCCCCSS--------HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             -----cCCCCCCCCcccC--------HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence                 9985  9999999        4499999999998   99998  999999999999999 889765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=5.6e-19  Score=130.72  Aligned_cols=78  Identities=19%  Similarity=0.352  Sum_probs=59.6

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchh
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVD  234 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~  234 (312)
                      ++.|.....|..|+++|.+  +++|.|++|++.|.....|..|+++|.++++                            
T Consensus        15 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------   64 (96)
T 2dmd_A           15 GKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHSDERP----------------------------   64 (96)
T ss_dssp             TBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHHSCCCCC----------------------------
T ss_pred             CCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHHhCCCCC----------------------------
Confidence            5566666666667666666  6667777777777666666667666666665                            


Q ss_pred             hHhHhhhcCceecCccccccCChhhHhhhhhhccCCCC
Q 038358          235 DERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGD  272 (312)
Q Consensus       235 l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~  272 (312)
                                |.|++|++.|.....|..|+++|+++..
T Consensus        65 ----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           65 ----------FKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             ----------EECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             ----------ccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence                      8999999999999999999999997644

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=4.3e-19  Score=127.27  Aligned_cols=82  Identities=24%  Similarity=0.447  Sum_probs=70.1

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +|+|++|            ++.|.....|..|+++|.+  +++|.|+.|++.|.....|..|+++|.++++         
T Consensus         1 ~~~C~~C------------~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---------   57 (82)
T 2kmk_A            1 SFDCKIC------------GKSFKRSSTLSTHLLIHSD--TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP---------   57 (82)
T ss_dssp             CEECSSS------------CCEESSHHHHHHHHHHHHT--CCCEECSSSCCEESSHHHHHHHHHHHHTCCC---------
T ss_pred             CccCCCC------------cccccCchhHHHHHHHcCC--CCCeeCCcCChhhCCHHHHHHHHHHhcCCCC---------
Confidence            4667777            7889999999999999988  8999999999999999999999999999887         


Q ss_pred             CCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccCChhhHhhhhhhccC
Q 038358          216 GCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       216 ~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                                                   |.|++|++.|.+...|..|+++|+|
T Consensus        58 -----------------------------~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           58 -----------------------------HKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             -----------------------------EECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             -----------------------------CcCCCcchhhCChHHHHHHHHhhCC
Confidence                                         7788888888888888888888764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=1.9e-18  Score=130.36  Aligned_cols=77  Identities=23%  Similarity=0.438  Sum_probs=59.8

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchh
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVD  234 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~  234 (312)
                      ++.|.....|..|+++|.+  +++|.|.+|++.|.....|..|+++|.++++                            
T Consensus        24 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------   73 (106)
T 2ee8_A           24 GRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSKEKP----------------------------   73 (106)
T ss_dssp             CCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT----------------------------
T ss_pred             CCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCCCCC----------------------------
Confidence            6667777777777777766  6777777777777777777777777777666                            


Q ss_pred             hHhHhhhcCceecCccccccCChhhHhhhhhhccCCC
Q 038358          235 DERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       235 l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~~  271 (312)
                                |.|++|++.|.+...|..|+++|+++.
T Consensus        74 ----------~~C~~C~~~f~~~~~L~~H~~~H~~~~  100 (106)
T 2ee8_A           74 ----------FKCQECGKGFCQSRTLAVHKTLHMQTS  100 (106)
T ss_dssp             ----------TSCSSSCCCCSSHHHHHHHHHHTTSCC
T ss_pred             ----------eECCCcCCcccCHHHHHHHHHHhCCCC
Confidence                      789999999999999999999998754

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=3.2e-18  Score=129.04  Aligned_cols=89  Identities=24%  Similarity=0.443  Sum_probs=79.1

Q ss_pred             CCCCcccCccccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           74 APKITRPCSECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      ..+++|.|.+|++.|.....|..|+++|.+ ++|                               +|++|          
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------------~C~~C----------   51 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPY-------------------------------TCDIC----------   51 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCC-------------------------------BCSSS----------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCc-------------------------------CCCCc----------
Confidence            445679999999999999999999999986 333                               33333          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                        ++.|.....|..|+++|.+  +++|.|.+|++.|.....|..|+++|.++++|
T Consensus        52 --~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           52 --HKAFRRQDHLRDHRYIHSK--EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             --CCBCSCHHHHHHHGGGSCC--CCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             --cchhCCHHHHHHHHHHhCC--CCCeECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence              8899999999999999998  99999999999999999999999999999985

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=1.1e-18  Score=127.56  Aligned_cols=76  Identities=24%  Similarity=0.449  Sum_probs=63.1

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchh
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVD  234 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~  234 (312)
                      ++.|.....|..|+++|.+  +++|.|.+|++.|.....|..|+++|+++++                            
T Consensus        13 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------   62 (90)
T 1a1h_A           13 DRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTGEKP----------------------------   62 (90)
T ss_dssp             CCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHCCCC----------------------------
T ss_pred             CCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCCCCC----------------------------
Confidence            6777777888888888877  7788888888888888888888888877776                            


Q ss_pred             hHhHhhhcCceecCccccccCChhhHhhhhhhccCC
Q 038358          235 DERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       235 l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                                |.|++|++.|.+...|..|+++|+++
T Consensus        63 ----------~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           63 ----------FACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             ----------EECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             ----------ccCCCCCchhCCHHHHHHHHHHhccc
Confidence                      88999999999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=9e-19  Score=118.15  Aligned_cols=58  Identities=26%  Similarity=0.505  Sum_probs=54.8

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFS  255 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~  255 (312)
                      ||||+|++||+.|.....|..|+++|+|++|                                      |.|++||++|.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp--------------------------------------~~C~~C~k~F~   43 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP--------------------------------------RSCPECGKCFR   43 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC--------------------------------------EECTTTCCEES
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC--------------------------------------eECCCCCCCcC
Confidence            8999999999999999999999999999999                                      89999999999


Q ss_pred             ChhhHhhhhhhccCCC
Q 038358          256 SGQALGGHKRCHWEKG  271 (312)
Q Consensus       256 ~~~~L~~H~~~H~~~~  271 (312)
                      +.+.|..|+++|+|++
T Consensus        44 ~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           44 DQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             SHHHHHHHGGGGSCC-
T ss_pred             CHHHHHHHhCccCCCC
Confidence            9999999999999874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=5e-18  Score=125.31  Aligned_cols=84  Identities=21%  Similarity=0.357  Sum_probs=68.9

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC--CCccccccc
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV--KGCFAITRS  213 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~--k~y~~~~~~  213 (312)
                      +|+|.+|            ++.|.....|..|+++|.+  +++|.|++|++.|.....|..|+++|+++  ++       
T Consensus         7 ~~~C~~C------------~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------   65 (95)
T 2yt9_A            7 GVACEIC------------GKIFRDVYHLNRHKLSHSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-------   65 (95)
T ss_dssp             CEECSSS------------CCEESSSHHHHHHHHHSCS--SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS-------
T ss_pred             CeECCCC------------CCccCChHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc-------
Confidence            6777777            6788888888888888877  78888888888888888888888888776  55       


Q ss_pred             CCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccCChhhHhhhhh-hccCCC
Q 038358          214 SDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKR-CHWEKG  271 (312)
Q Consensus       214 C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~  271 (312)
                                                     |.|++|++.|.+...|..|++ +|.++.
T Consensus        66 -------------------------------~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           66 -------------------------------YICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             -------------------------------BCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             -------------------------------eECCCccchhCCHHHHHHHHHHhcCCCC
Confidence                                           789999999999999999985 787653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=8e-18  Score=124.43  Aligned_cols=89  Identities=22%  Similarity=0.366  Sum_probs=78.3

Q ss_pred             CCCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCC
Q 038358           74 APKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGV  153 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~  153 (312)
                      .+.++|.|.+|++.|.....|..|++.|.++                              ++|.|++|           
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------------------------------~~~~C~~C-----------   42 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV------------------------------KPYKCKTC-----------   42 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCC------------------------------CSEECSSS-----------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCC------------------------------CCEeCCCC-----------
Confidence            3456799999999999999999999999863                              12444444           


Q ss_pred             CCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          154 GTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       154 C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                       ++.|.....|..|+++|.+  +++|.|.+|++.|.....|..|+++|+++++
T Consensus        43 -~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           43 -DYAAADSSSLNKHLRIHSD--ERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             -CCEESSHHHHHHHHHHSCC--CCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             -CCccCCHHHHHHHHHHhCC--CCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence             8899999999999999998  9999999999999999999999999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.1e-17  Score=126.99  Aligned_cols=81  Identities=17%  Similarity=0.297  Sum_probs=48.3

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---eecCcccc
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---HKCSICLR  252 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C~~C~k  252 (312)
                      +++|.| .|++.|.....|..|+++|.++++|     .|..|++.|....        .|.+|+++|++   |.|++|++
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~-----~C~~C~~~f~~~~--------~l~~H~~~h~~~~~~~C~~C~~   73 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY-----GCGVCGKKFKMKH--------HLVGHMKIHTGIKPYECNICAK   73 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSE-----ECTTTSCEESSSH--------HHHHHHTTTCCCCCEECSSSCC
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCc-----cCCCCCcccCCHH--------HHHHHHHHcCCCCCeeCCCCcc
Confidence            444444 4444444444444444444444442     4444444444422        44444444443   89999999


Q ss_pred             ccCChhhHhhhhhhccCC
Q 038358          253 VFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       253 ~F~~~~~L~~H~~~H~~~  270 (312)
                      .|.....|..|+++|+..
T Consensus        74 ~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           74 RFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             EESCHHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHcccc
Confidence            999999999999999754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1e-17  Score=126.61  Aligned_cols=86  Identities=15%  Similarity=0.210  Sum_probs=55.0

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---e
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---H  245 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~  245 (312)
                      ++|.+  +++|.|.+|++.|.....|..|+++|  +++     |.|..|++.|..        ...|.+|++ |++   |
T Consensus         9 ~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~-----~~C~~C~~~f~~--------~~~l~~H~~-H~~~~~~   70 (107)
T 1wjp_A            9 SPVEN--KEVYQCRLCNAKLSSLLEQGSHERLC--RNA-----AVCPYCSLRFFS--------PELKQEHES-KCEYKKL   70 (107)
T ss_dssp             CCCCC--CCCCBCTTTCCBCSSHHHHHHHHHHH--HHS-----BCCTTTCCCBSS--------HHHHHHHHH-HCSTGGG
T ss_pred             cccCC--CcCeECCCCCCccCCHHHHHHHHHHC--CCC-----ccCCCCCCccCC--------HHHHHHHHH-cCCCCCc
Confidence            34444  55555555555555555555555555  234     255555555555        225555553 544   8


Q ss_pred             ecCccccccCChhhHhhhhh-hccCCCC
Q 038358          246 KCSICLRVFSSGQALGGHKR-CHWEKGD  272 (312)
Q Consensus       246 ~C~~C~k~F~~~~~L~~H~~-~H~~~~~  272 (312)
                      .|++|++.|.+...|..|++ +|.++..
T Consensus        71 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           71 TCLECMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             EEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             cCccccchhCCHHHHHHHHHHHcCCCCC
Confidence            99999999999999999997 8876543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=1e-17  Score=122.32  Aligned_cols=86  Identities=20%  Similarity=0.432  Sum_probs=73.8

Q ss_pred             CCcccCc--cccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           76 KITRPCS--ECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        76 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      +++|.|.  .|++.|.....|..|+++|.+ ++                               |.|.+|          
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-------------------------------~~C~~C----------   40 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-------------------------------FQCRIC----------   40 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-------------------------------EECTTT----------
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCC-------------------------------ccCCCC----------
Confidence            4579998  599999999999999999875 33                               344444          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                        ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|+++++
T Consensus        41 --~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           41 --MRNFSRSDHLTTHIRTHTG--EKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             --CCEESCHHHHHHHHHHHHC--CCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             --CcccCCHHHHHHHHHHcCC--CCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence              8899999999999999998  9999999999999999999999999999863

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.5e-17  Score=123.69  Aligned_cols=88  Identities=18%  Similarity=0.183  Sum_probs=76.5

Q ss_pred             CCCCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           73 GAPKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        73 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      ..++++|.|.+|++.|.....|..|+++|. ++|.|.                               +|          
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~-------------------------------~C----------   48 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCP-------------------------------YC----------   48 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCT-------------------------------TT----------
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCC-------------------------------CC----------
Confidence            345568999999999999999999999884 343333                               33          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhh-hcCCCCCc
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA-SHKHVKGC  207 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~k~y  207 (312)
                        ++.|.....|..|++ |++  +++|+|++|++.|.....|..|++ +|.++++|
T Consensus        49 --~~~f~~~~~l~~H~~-H~~--~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           49 --SLRFFSPELKQEHES-KCE--YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             --CCCBSSHHHHHHHHH-HCS--TGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCC
T ss_pred             --CCccCCHHHHHHHHH-cCC--CCCccCccccchhCCHHHHHHHHHHHcCCCCCC
Confidence              889999999999996 998  999999999999999999999997 99999985

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=1.1e-17  Score=119.74  Aligned_cols=82  Identities=23%  Similarity=0.421  Sum_probs=72.2

Q ss_pred             cccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCCcc
Q 038358           78 TRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGTGS  157 (312)
Q Consensus        78 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~k~  157 (312)
                      +|.|.+|++.|.....|..|+++|.++                              ++|.|+.|            ++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~------------------------------~~~~C~~C------------~~~   38 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDT------------------------------RPYPCQYC------------GKR   38 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTC------------------------------CCEECSSS------------CCE
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCC------------------------------CCeeCCcC------------Chh
Confidence            589999999999999999999998752                              12444444            889


Q ss_pred             ccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          158 FQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       158 F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |.....|..|+++|++  +++|.|++|++.|.....|..|+++|+|
T Consensus        39 f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           39 FHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             hCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            9999999999999998  9999999999999999999999999975

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=6e-17  Score=120.53  Aligned_cols=75  Identities=23%  Similarity=0.457  Sum_probs=60.1

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecC--CCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                      ++.|.....|..|+++|.+  +++|.|.  .|++.|.....|..|+++|+++++                          
T Consensus        24 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------   75 (100)
T 2ebt_A           24 TKVYTKSSHLKAHLRTHTG--EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP--------------------------   75 (100)
T ss_dssp             CCEESCHHHHHHHHHHHSC--CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS--------------------------
T ss_pred             CCcccCHHHHHHHHHHhCC--CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC--------------------------
Confidence            7788888888888888887  8888885  588888888888888888888877                          


Q ss_pred             hhhHhHhhhcCceecCccccccCChhhHhhhhhhccC
Q 038358          233 VDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                                  |.|++|++.|.....|..|+++|++
T Consensus        76 ------------~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           76 ------------FQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ------------CBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             ------------eECCCCcCccCCHHHHHHHHHHhCC
Confidence                        6777777777777777777777753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.68  E-value=3.3e-17  Score=110.44  Aligned_cols=58  Identities=16%  Similarity=0.320  Sum_probs=54.3

Q ss_pred             CcccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          134 VEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       134 ~~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      ++||+|++|            |+.|.....|..|+++|+|  ++||.|++||+.|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C------------~k~F~~~~~L~~H~~~Ht~--ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFC------------GKTYRDASGLSRHRRAHLG--YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTT------------CCEESSHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCC------------CCEeCCHHHHHHHHHHhCC--CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            568889888            8899999999999999999  999999999999999999999999999974

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=6.4e-17  Score=117.74  Aligned_cols=74  Identities=20%  Similarity=0.445  Sum_probs=60.4

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecC--CCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                      ++.|.....|..|+++|.+  +++|.|+  .|++.|.....|..|+++|+++++                          
T Consensus        14 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------   65 (89)
T 2wbs_A           14 GKTYTKSSHLKAHLRTHTG--EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP--------------------------   65 (89)
T ss_dssp             CCEESSHHHHHHHHTTSCS--SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC--------------------------
T ss_pred             CCcCCCHHHHHHHHHhcCC--CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC--------------------------
Confidence            7788888888888888877  7888886  588888888888888888888777                          


Q ss_pred             hhhHhHhhhcCceecCccccccCChhhHhhhhhhcc
Q 038358          233 VDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                                  |.|++|++.|.....|..|+++|.
T Consensus        66 ------------~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           66 ------------FQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             ------------EECSSSSCEESSHHHHHHHGGGGC
T ss_pred             ------------ccCCCCCcccCCHHHHHHHHHhhC
Confidence                        788888888888888888888873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1e-16  Score=118.13  Aligned_cols=89  Identities=24%  Similarity=0.347  Sum_probs=75.2

Q ss_pred             CCCcccCccccccCCChHHHHHHHHhCCCCCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCC
Q 038358           75 PKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVG  154 (312)
Q Consensus        75 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C  154 (312)
                      +..+|.|.+|++.|.....|..|+++|.++.                              +|+|++|            
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~------------------------------~~~C~~C------------   41 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEK------------------------------PYSCPVC------------   41 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSC------------------------------SEECSSS------------
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCC------------------------------CCcCCCC------------
Confidence            4567999999999999999999999998531                              2344444            


Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhh-hcCCCC
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA-SHKHVK  205 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~k  205 (312)
                      ++.|.....|..|+++|++..+++|.|++|++.|.....|..|++ +|.++.
T Consensus        42 ~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           42 GLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             CCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             CCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            889999999999999999822299999999999999999999986 788753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.66  E-value=1.1e-16  Score=122.80  Aligned_cols=76  Identities=25%  Similarity=0.493  Sum_probs=63.1

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecC--CCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                      ++.|.....|..|+++|.+  +++|.|+  .|++.|.....|..|+++|.++++                          
T Consensus        15 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------   66 (119)
T 2jp9_A           15 NKRYFKLSHLQMHSRKHTG--EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP--------------------------   66 (119)
T ss_dssp             CCCBSCHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC--------------------------
T ss_pred             cchhCCHHHHHHHHHhhCC--CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC--------------------------
Confidence            6677777788888777777  7778887  688888888888888777777776                          


Q ss_pred             hhhHhHhhhcCceecCccccccCChhhHhhhhhhccCC
Q 038358          233 VDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                                  |.|++|++.|.+...|..|+++|+++
T Consensus        67 ------------~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           67 ------------FQCKTCQRKFSRSDHLKTHTRTHTGE   92 (119)
T ss_dssp             ------------EECTTTCCEESCHHHHHHHHHHHHTC
T ss_pred             ------------ccCCccCchhCCHHHHHHHHHHhcCC
Confidence                        89999999999999999999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=4.7e-18  Score=123.91  Aligned_cols=81  Identities=16%  Similarity=0.149  Sum_probs=74.8

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc--eecCccccc
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG--HKCSICLRV  253 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~--~~C~~C~k~  253 (312)
                      ++||.|++|++.|.....|..|+++|+++++|     .|+.|++.|...        ..|.+|+++|++  |.|+.|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C~k~f~~~--------~~L~~H~~~h~~~~~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF-----ACDICGRKFARS--------DERKRHRDIQHILPILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCE-----ECTTTCCEESSH--------HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCc-----cCCCCCCccCCH--------HHHHHHHHHhCCCcchHHHHHHH
Confidence            58999999999999999999999999999995     999999999994        499999999998  999999999


Q ss_pred             cCChhhHhhhhhhccC
Q 038358          254 FSSGQALGGHKRCHWE  269 (312)
Q Consensus       254 F~~~~~L~~H~~~H~~  269 (312)
                      |.....|..|++.+++
T Consensus        68 f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           68 LSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHH
Confidence            9999999999976553

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=1.5e-17  Score=127.38  Aligned_cols=93  Identities=11%  Similarity=0.077  Sum_probs=79.3

Q ss_pred             hHHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhh--hcCCCCccee-cCCCcccc--CChHHHHhHh
Q 038358          125 VTSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEV--NLGGVSCRFE-CNSCKKVF--GSHQALGGHR  198 (312)
Q Consensus       125 ~~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~--H~~~~~k~~~-C~~C~~~F--~~~~~L~~H~  198 (312)
                      +..|+++|.++ +|+|++|            ++.|.....|..|+++  |.+  ++++. |.+|++.|  .....|..|+
T Consensus         7 l~~H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~~~h~~--~~~~~~C~~C~~~f~f~~~~~l~~H~   72 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDC------------SAAYDTLVELTVHMNETGHYR--DDNHETDNNNPKRWSKPRKRSLLEME   72 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSS------------SCEESSHHHHHHHHHHTCCCB--CSCCCCCCCCCSCCSSCCCCCCCCCC
T ss_pred             hhhheeeeCCCCCEECCcc------------CchhcCHHHHHHHHHHhCccc--cCCCccCCCCCcccccccHHHHHHHh
Confidence            34455556554 7888888            8899999999999998  776  66654 99999999  8999999999


Q ss_pred             hhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc
Q 038358          199 ASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG  244 (312)
Q Consensus       199 ~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~  244 (312)
                      ++|++++||     .|++|++.|...+        .|.+|+++|..
T Consensus        73 ~~H~~~~~~-----~C~~C~k~f~~~~--------~L~~H~~~hh~  105 (115)
T 2dmi_A           73 GKEDAQKVL-----KCMYCGHSFESLQ--------DLSVHMIKTKH  105 (115)
T ss_dssp             CSCCCCSSC-----BCSSSCCBCSSHH--------HHHHHHHHTTT
T ss_pred             hccCCCcce-----ECCCCCCccCCHH--------HHHHHHHHhCC
Confidence            999999995     9999999999944        99999998876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.3e-16  Score=121.04  Aligned_cols=76  Identities=24%  Similarity=0.380  Sum_probs=53.6

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhh---cCCCCCcccccccCCCCCCCCcCCCCCcccc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRAS---HKHVKGCFAITRSSDGCEIDHDHCSDGIVKE  231 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~---H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~  231 (312)
                      ++.|.....|..|+++|.+  +++|.|++|++.|.+...|..|++.   |.++++                         
T Consensus        14 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-------------------------   66 (124)
T 2dlq_A           14 HKKFLSKYYLKVHNRKHTG--EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-------------------------   66 (124)
T ss_dssp             CCCCSSHHHHHHHHHHHSS--CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-------------------------
T ss_pred             CCcCCCHHHHHHHHHhCCC--CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-------------------------
Confidence            5566666666666666655  5666666666666666666666553   233333                         


Q ss_pred             chhhHhHhhhcCceecCccccccCChhhHhhhhhhccCC
Q 038358          232 NVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       232 ~~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                                   |.|++|++.|.....|..|+++|+++
T Consensus        67 -------------~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (124)
T 2dlq_A           67 -------------FTCSVCQETFRRRMELRLHMVSHTGE   92 (124)
T ss_dssp             -------------EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             -------------eECCCCCCccCCHHHHHHHHHHcCCC
Confidence                         89999999999999999999999865

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=1.1e-16  Score=115.17  Aligned_cols=78  Identities=21%  Similarity=0.251  Sum_probs=70.3

Q ss_pred             ceec--CCCccccCChHHHHhHhhhcCCCCCcccccccCCC--CCCCCcCCCCCccccchhhHhHhhhcCceecCc---c
Q 038358          178 RFEC--NSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDG--CEIDHDHCSDGIVKENVDDERKMMMVLGHKCSI---C  250 (312)
Q Consensus       178 ~~~C--~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~--C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~---C  250 (312)
                      ||.|  +.|++.|.....|..|+++|.++++|     +|+.  |++.|...        ..|.+|+++|++|.|+.   |
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-----~C~~~~C~~~f~~~--------~~l~~H~~~h~~~~C~~~~~C   67 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY-----ECPHEGCDKRFSLP--------SRLKRHEKVHAGYPCKKDDSC   67 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCE-----ECCSTTCCCEESSH--------HHHHHHHHHHHSEECCSCSSC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCe-----eCCCCCCcCccCCH--------HHHHHHHHHhCCCCCCCCCCC
Confidence            6889  88999999999999999999999885     9988  99999884        48899999998899999   9


Q ss_pred             ccccCChhhHhhhhhhcc
Q 038358          251 LRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       251 ~k~F~~~~~L~~H~~~H~  268 (312)
                      ++.|.....|..|+++|+
T Consensus        68 ~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           68 SFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCEESSHHHHHHHHHHCC
T ss_pred             CCccCCHHHHHHHHHhcC
Confidence            999999999999999885

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.63  E-value=1.8e-16  Score=127.70  Aligned_cols=87  Identities=22%  Similarity=0.408  Sum_probs=78.0

Q ss_pred             ccCccccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCccccccc--ccchhccCCCCCCC
Q 038358           79 RPCSECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAA--CLLMLANGDVGVGT  155 (312)
Q Consensus        79 ~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~~~C~  155 (312)
                      |.|.+|++.|.....|..|+++|.+ ++|                               .|.+  |            +
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------------~C~~~~C------------~   99 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPF-------------------------------PCPFPGC------------G   99 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSE-------------------------------ECSCTTT------------C
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcc-------------------------------cCCcCCC------------C
Confidence            8999999999999999999999985 333                               3333  4            8


Q ss_pred             ccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          156 GSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       156 k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +.|.....|..|+++|++  +++|.|.+  |++.|.....|..|+++|++++||     +|+
T Consensus       100 ~~f~~~~~L~~H~~~h~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~-----~c~  154 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTG--EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG-----PSS  154 (155)
T ss_dssp             CEESCHHHHHHHHTTTCS--SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS-----CSC
T ss_pred             CccCCHHHHHHHHHhhCC--CCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC-----CCC
Confidence            899999999999999998  99999997  999999999999999999999995     775

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.9e-16  Score=117.82  Aligned_cols=85  Identities=25%  Similarity=0.406  Sum_probs=74.2

Q ss_pred             CCCCcccCccccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCC
Q 038358           74 APKITRPCSECGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVG  152 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~  152 (312)
                      .++++|.| .|++.|.....|..|++.|.+ ++                               |+|++|          
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-------------------------------~~C~~C----------   43 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-------------------------------YGCGVC----------   43 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-------------------------------EECTTT----------
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC-------------------------------ccCCCC----------
Confidence            45668999 999999999999999999985 33                               344444          


Q ss_pred             CCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          153 VGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       153 ~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                        ++.|.....|..|+++|.+  +++|.|++|++.|.....|..|++.|...
T Consensus        44 --~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           44 --GKKFKMKHHLVGHMKIHTG--IKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             --SCEESSSHHHHHHHTTTCC--CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             --CcccCCHHHHHHHHHHcCC--CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence              8899999999999999998  99999999999999999999999988643

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=9.1e-16  Score=114.06  Aligned_cols=86  Identities=20%  Similarity=0.420  Sum_probs=73.7

Q ss_pred             CCCcccCcc--ccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCC
Q 038358           75 PKITRPCSE--CGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDV  151 (312)
Q Consensus        75 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~  151 (312)
                      ..++|.|.+  |++.|.....|..|++.|.+ ++|.|..                             +.|         
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-----------------------------~~C---------   53 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW-----------------------------EGC---------   53 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCS-----------------------------SSC---------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCC-----------------------------CCC---------
Confidence            345799997  99999999999999999985 3333321                             124         


Q ss_pred             CCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          152 GVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       152 ~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                         ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|.+
T Consensus        54 ---~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           54 ---DWRFARSDELTRHYRKHTG--AKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ---CCEESSHHHHHHHHHHHTS--CCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             ---CCccCCHHHHHHHHHHhCC--CCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence               8899999999999999998  9999999999999999999999999974

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=9.8e-16  Score=111.36  Aligned_cols=83  Identities=23%  Similarity=0.453  Sum_probs=72.0

Q ss_pred             CcccCcc--ccccCCChHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCC
Q 038358           77 ITRPCSE--CGKKFWSWKALFGHMRCHPE-RQWRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGV  153 (312)
Q Consensus        77 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~-~~~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~  153 (312)
                      .+|.|.+  |++.|.....|..|++.|.+ ++|.|..                             +.|           
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-----------------------------~~C-----------   43 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW-----------------------------DGC-----------   43 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCS-----------------------------TTT-----------
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCC-----------------------------CCC-----------
Confidence            4689999  99999999999999999986 3333321                             024           


Q ss_pred             CCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcC
Q 038358          154 GTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       154 C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                       ++.|.....|..|+++|.+  +++|.|++|++.|.....|..|+++|.
T Consensus        44 -~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           44 -GWKFARSDELTRHYRKHTG--HRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             -CCEESSHHHHHHHHHHHHC--CCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             -CCccCCHHHHHHHHHHcCC--CCCccCCCCCcccCCHHHHHHHHHhhC
Confidence             8899999999999999999  999999999999999999999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.60  E-value=1.3e-16  Score=124.70  Aligned_cols=87  Identities=16%  Similarity=0.199  Sum_probs=71.2

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccC
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSS  214 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C  214 (312)
                      +.+.|++|++.|..      .+.|.....|..|+ .|++  ++||.|++||+.|.....|..|+++|  ++|        
T Consensus        40 ~~~~c~~~~~~~~~------~~~~~~~~~l~~h~-~h~~--~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~--------  100 (129)
T 2wbt_A           40 KRLIRAIVKTLIHN------PQLLDESSYLYRLL-ASKA--ISQFVCPLCLMPFSSSVSLKQHIRYT--EHT--------  100 (129)
T ss_dssp             HHHHHHHHHHHHHC------GGGTTTHHHHHHHH-HHHH--HCSEECTTTCCEESSHHHHHHHHHHT--CCC--------
T ss_pred             CcccchhhhcccCC------CcccCCHHHHHHHH-HhCC--CCCeECCCCCcccCCHhHHHHHHHHC--CCC--------
Confidence            35778888777653      35677778888887 5877  89999999999999999999999998  777        


Q ss_pred             CCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccCChhhHhhhhhhccCC
Q 038358          215 DGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       215 ~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                                                    |.|++|++.|.+.+.|..|+++|++.
T Consensus       101 ------------------------------~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          101 ------------------------------KVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ------------------------------CBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ------------------------------CCCCCCCcccCCHHHHHHHHHHHCCc
Confidence                                          67888888888888888888888764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.60  E-value=1e-15  Score=118.42  Aligned_cols=76  Identities=25%  Similarity=0.392  Sum_probs=62.0

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchh
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVD  234 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~  234 (312)
                      ++.|.....|..|+++| +  +++|.|++|++.|.....|..|+++|.++++                            
T Consensus        14 ~~~f~~~~~l~~H~~~h-~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------   62 (124)
T 1ubd_C           14 TKMFRDNSAMRKHLHTH-G--PRVHVCAECGKAFVESSKLKRHQLVHTGEKP----------------------------   62 (124)
T ss_dssp             CCEESSHHHHHHHHGGG-S--CCCEECTTTCCEESSHHHHHHHGGGTSCCCC----------------------------
T ss_pred             cCccCCHHHHHHHHHHc-C--CCCeECCCCCchhCCHHHHHHHHHHcCCCCC----------------------------
Confidence            66777777788887777 5  6778888888888877778888777777776                            


Q ss_pred             hHhHhhhcCceecCc--cccccCChhhHhhhhhhccCCC
Q 038358          235 DERKMMMVLGHKCSI--CLRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       235 l~~H~~~H~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~  271 (312)
                                |.|.+  |++.|.....|..|+++|+++.
T Consensus        63 ----------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   91 (124)
T 1ubd_C           63 ----------FQCTFEGCGKRFSLDFNLRTHVRIHTGDR   91 (124)
T ss_dssp             ----------EECCSTTCCCEESCHHHHHHHHHHHHCCC
T ss_pred             ----------eeCCCCCCcCccCCHHHHHHHHHHhCCCC
Confidence                      88975  9999999999999999998753

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.1e-16  Score=116.71  Aligned_cols=78  Identities=19%  Similarity=0.236  Sum_probs=69.1

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccC-ChHHHHhHhhhcCC-CCCcccccccCCCCCCCCcCCCCCccccc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFG-SHQALGGHRASHKH-VKGCFAITRSSDGCEIDHDHCSDGIVKEN  232 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~-~~~~L~~H~~~H~~-~k~y~~~~~~C~~C~~~f~~~~~~~~~~~  232 (312)
                      ...+.....+..|+++|.+  +++|.|.+|++.|. ....|..|+++|++ +++                          
T Consensus         3 s~s~~~~~~~~~h~~~h~~--~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~--------------------------   54 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHE--RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA--------------------------   54 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTT--TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH--------------------------
T ss_pred             CCCCCCCCcHHHHHHHhcc--CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC--------------------------
Confidence            3466777788899999988  99999999999999 99999999999988 777                          


Q ss_pred             hhhHhHhhhcCceecCccccccCChhhHhhhhhhccCCCC
Q 038358          233 VDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGD  272 (312)
Q Consensus       233 ~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~  272 (312)
                                  |.|++|++.|.+...|..|+++|+++..
T Consensus        55 ------------~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           55 ------------LKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             ------------HSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             ------------EECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence                        8899999999999999999999997643

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.6e-15  Score=111.29  Aligned_cols=77  Identities=14%  Similarity=0.159  Sum_probs=69.2

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCcccc-CChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccch
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVF-GSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENV  233 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F-~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~  233 (312)
                      ...|.....|..|++.|.+  +++|.|++|++.| .....|..|+++| ++++                           
T Consensus        13 ~~~~~~~~~~~~~~~~~~~--~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~---------------------------   62 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVD--KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM---------------------------   62 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHH--TSCEECTTTCSCEESSHHHHHHHHHHH-CCCC---------------------------
T ss_pred             CCCCCCchHHHHHHHHhcC--CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC---------------------------
Confidence            4578888899999999998  9999999999999 9999999999999 9988                           


Q ss_pred             hhHhHhhhcCceecCccccccCChhhHhhh-hhhccCCCC
Q 038358          234 DDERKMMMVLGHKCSICLRVFSSGQALGGH-KRCHWEKGD  272 (312)
Q Consensus       234 ~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H-~~~H~~~~~  272 (312)
                                 |.|.+|++.|.....|..| +++|++++.
T Consensus        63 -----------~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           63 -----------FTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             -----------CCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             -----------eECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence                       7888999999999999999 888987644

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.2e-15  Score=105.34  Aligned_cols=65  Identities=28%  Similarity=0.457  Sum_probs=59.5

Q ss_pred             HhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceec
Q 038358          168 NEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKC  247 (312)
Q Consensus       168 ~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C  247 (312)
                      .++|.+  +++|.|++|++.|.....|..|+++|.++++                                      |.|
T Consensus         6 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~--------------------------------------~~C   45 (72)
T 1x6e_A            6 SGIHSG--EKPYGCVECGKAFSRSSILVQHQRVHTGEKP--------------------------------------YKC   45 (72)
T ss_dssp             CCTTTT--CCCEECSSSCCEESSHHHHHHHHHGGGCSCC--------------------------------------EEC
T ss_pred             CcccCC--CCCccCCCCCCccCCHHHHHHHHHhcCCCCC--------------------------------------eEC
Confidence            467888  9999999999999999999999999999988                                      899


Q ss_pred             CccccccCChhhHhhhhhhccCCCC
Q 038358          248 SICLRVFSSGQALGGHKRCHWEKGD  272 (312)
Q Consensus       248 ~~C~k~F~~~~~L~~H~~~H~~~~~  272 (312)
                      ++|++.|.....|..|+++|++++.
T Consensus        46 ~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           46 LECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCcccCCHHHHHHHHHhcCCCCC
Confidence            9999999999999999999987643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.8e-15  Score=109.24  Aligned_cols=76  Identities=14%  Similarity=0.155  Sum_probs=52.9

Q ss_pred             hHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC----CCcccccccCCCCCCCCcCCCCCccccchhhHhH
Q 038358          163 QVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV----KGCFAITRSSDGCEIDHDHCSDGIVKENVDDERK  238 (312)
Q Consensus       163 ~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~----k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H  238 (312)
                      .|..|+++|++  +++|.|.+|++.|.....|..|++.|+++    ++     |.|..|++.|...        ..|.+|
T Consensus         2 s~~~H~~~H~~--~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~-----~~C~~C~~~f~~~--------~~L~~H   66 (86)
T 1x6h_A            2 SSGSSGRTHTG--EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA-----FVCSKCGKTFTRR--------NTMARH   66 (86)
T ss_dssp             TTTCCSTTCCC--CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCC-----EECSSSCCEESCH--------HHHHHH
T ss_pred             CcccccceecC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcc-----eECCCCCChhCCH--------HHHHHH
Confidence            46789999998  99999999999999999999999887765    45     2455454444442        244444


Q ss_pred             hhhcCc---eecCccccc
Q 038358          239 MMMVLG---HKCSICLRV  253 (312)
Q Consensus       239 ~~~H~~---~~C~~C~k~  253 (312)
                      +++|++   +.|..|+..
T Consensus        67 ~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           67 ADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             HHHCCCCCSCCCCCCCCC
T ss_pred             HHHccCCCCcccCCCCCC
Confidence            444444   444444443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.7e-15  Score=104.51  Aligned_cols=61  Identities=15%  Similarity=0.244  Sum_probs=56.8

Q ss_pred             CccccCchhHHhHHh-hhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCc
Q 038358          155 TGSFQQGIQVQDTNE-VNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHD  222 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~-~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~  222 (312)
                      ++.|.....|..|++ .|.+  +++|.|++  |++.|.....|..|+++|+++++|     +|++|++.|.
T Consensus        16 ~~~f~~~~~L~~H~~~~H~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C~k~F~   79 (79)
T 2dlk_A           16 GRIFSNRQYLNHHKKYQHIH--QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY-----ICEFSGPSSG   79 (79)
T ss_dssp             CCEESSHHHHHHHHHHGGGS--CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCC-----SCCSSSCCCC
T ss_pred             cCccCCHHHHHHHHHHHhCC--CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCe-----eCCCCCCCCC
Confidence            889999999999999 7998  99999999  999999999999999999999995     8888888773

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.54  E-value=3.3e-15  Score=107.39  Aligned_cols=71  Identities=15%  Similarity=0.213  Sum_probs=66.2

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCC---CCCCCcCCCCCcc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDG---CEIDHDHCSDGIV  229 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~---C~~~f~~~~~~~~  229 (312)
                      ++.|.....|..|+++|.+  +++|+|++  |++.|.....|..|+++|++   |     .|..   |++.|...     
T Consensus        10 ~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~-----~C~~~~~C~~~f~~~-----   74 (85)
T 2j7j_A           10 GKAFKKHNQLKVHQFSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKVHAG---Y-----PCKKDDSCSFVGKTW-----   74 (85)
T ss_dssp             CCEESSHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHS---E-----ECCSCSSCCCEESSH-----
T ss_pred             CcccCCHHHHHHHHHHhCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhCC---C-----CCCCCCCCCCccCCH-----
Confidence            8899999999999999998  99999998  99999999999999999998   4     8999   99999994     


Q ss_pred             ccchhhHhHhhhcC
Q 038358          230 KENVDDERKMMMVL  243 (312)
Q Consensus       230 ~~~~~l~~H~~~H~  243 (312)
                         ..|.+|+++|+
T Consensus        75 ---~~l~~H~~~hh   85 (85)
T 2j7j_A           75 ---TLYLKHVAECH   85 (85)
T ss_dssp             ---HHHHHHHHHCC
T ss_pred             ---HHHHHHHHhcC
Confidence               49999999875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=7.9e-15  Score=101.83  Aligned_cols=65  Identities=20%  Similarity=0.244  Sum_probs=58.8

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCcc
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSIC  250 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C  250 (312)
                      |.+  +++|+|++|++.|.....|..|+++|+++++                                      |.|++|
T Consensus         4 ~~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~--------------------------------------~~C~~C   43 (70)
T 1x5w_A            4 GSS--GHPEKCSECSYSCSSKAALRIHERIHCTDRP--------------------------------------FKCNYC   43 (70)
T ss_dssp             CCC--CCSEECSSSSCEESSHHHHHHHHGGGCCSCS--------------------------------------EECSSS
T ss_pred             CCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCC--------------------------------------EeCCCC
Confidence            455  8999999999999999999999999999988                                      899999


Q ss_pred             ccccCChhhHhhhhhhccCCCCCCc
Q 038358          251 LRVFSSGQALGGHKRCHWEKGDDPL  275 (312)
Q Consensus       251 ~k~F~~~~~L~~H~~~H~~~~~~~~  275 (312)
                      ++.|.....|..|+++|+++...|.
T Consensus        44 ~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A           44 SFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             SCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CCccCCHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999998765554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=4.2e-15  Score=105.26  Aligned_cols=68  Identities=21%  Similarity=0.355  Sum_probs=60.2

Q ss_pred             hHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhh-hcCCC-CCcccccccCCCCCCCCcCCCCCccccchhhHhHhh
Q 038358          163 QVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA-SHKHV-KGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMM  240 (312)
Q Consensus       163 ~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~-k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~  240 (312)
                      .|.+|+++|++  ++||.|++|++.|.....|..|++ .|.++ ++                                  
T Consensus         2 s~~~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~----------------------------------   45 (77)
T 2ct1_A            2 SSGSSGRTHSG--EKPYECYICHARFTQSGTMKMHILQKHTENVAK----------------------------------   45 (77)
T ss_dssp             CCCCCCCCCSC--CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS----------------------------------
T ss_pred             CCCccccccCC--CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc----------------------------------
Confidence            35679999998  999999999999999999999997 67765 56                                  


Q ss_pred             hcCceecCccccccCChhhHhhhhhhccCC
Q 038358          241 MVLGHKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       241 ~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                          |.|++|++.|.....|..|+++|++.
T Consensus        46 ----~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           46 ----FHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             ----EECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             ----cCCCCCCCccCCHHHHHHHHHHhCCC
Confidence                89999999999999999999987754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.1e-14  Score=104.98  Aligned_cols=79  Identities=16%  Similarity=0.237  Sum_probs=66.5

Q ss_pred             HHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCC--CcceecCCCccccCChHHHHhHhhhcC
Q 038358          126 TSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGV--SCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       126 ~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~--~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      ..|+++|.++ +|+|++|            ++.|.....|..|++.|++..  +++|.|.+|++.|.....|..|+++|+
T Consensus         4 ~~H~~~H~~~k~~~C~~C------------~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHC------------DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             TCCSTTCCCCCCEECSSS------------SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             ccccceecCCCCCcCCCC------------CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc
Confidence            3455566555 6888888            889999999999999877611  179999999999999999999999999


Q ss_pred             CCCCcccccccCCCCCCCC
Q 038358          203 HVKGCFAITRSSDGCEIDH  221 (312)
Q Consensus       203 ~~k~y~~~~~~C~~C~~~f  221 (312)
                      +++++     .|..|+..|
T Consensus        72 ~~~~~-----~~~~~~~~~   85 (86)
T 1x6h_A           72 GPDGV-----EGENSGPSS   85 (86)
T ss_dssp             CCCSC-----CCCCCCCCC
T ss_pred             CCCCc-----ccCCCCCCC
Confidence            99995     999999865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.51  E-value=4.7e-16  Score=113.17  Aligned_cols=80  Identities=16%  Similarity=0.248  Sum_probs=72.0

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccC
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSS  214 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C  214 (312)
                      ++|.|++|            ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|++ .+     |.|
T Consensus         2 k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~-----~~c   61 (88)
T 1llm_C            2 KPFQCRIC------------MRNFSRSDHLTTHIRTHTG--EKPFACDICGRKFARSDERKRHRDIQHI-LP-----ILE   61 (88)
T ss_dssp             CCEECTTT------------CCEESCHHHHHHHHHHHHC--CCCEECTTTCCEESSHHHHHHHHHHHTH-HH-----HHH
T ss_pred             CCCcCCCC------------CCccCCHHHHHHHHHHcCC--CCCccCCCCCCccCCHHHHHHHHHHhCC-Cc-----chH
Confidence            46888888            8899999999999999999  9999999999999999999999999985 55     599


Q ss_pred             CCCCCCCcCCCCCccccchhhHhHhhhc
Q 038358          215 DGCEIDHDHCSDGIVKENVDDERKMMMV  242 (312)
Q Consensus       215 ~~C~~~f~~~~~~~~~~~~~l~~H~~~H  242 (312)
                      ..|++.|..        ...|..|++.+
T Consensus        62 ~~C~~~f~~--------~~~L~~H~~~~   81 (88)
T 1llm_C           62 DKVEELLSK--------NYHLENEVARL   81 (88)
T ss_dssp             HHHHHHHHH--------HHHHHHHHHHH
T ss_pred             HHHHHHHHH--------HhhhHHHHHHH
Confidence            999999999        45899998754

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=9.7e-15  Score=105.46  Aligned_cols=63  Identities=22%  Similarity=0.369  Sum_probs=55.7

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCS  248 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~  248 (312)
                      .++.+  .++|.|++|++.|.....|.+|+++|++++|                                      |.|+
T Consensus        21 ~~~~~--~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~--------------------------------------~~C~   60 (85)
T 2lv2_A           21 GLSAS--AECHLCPVCGESFASKGAQERHLRLLHAAQV--------------------------------------FPCK   60 (85)
T ss_dssp             SSCCC--CTTEECTTSCCEESSHHHHHHHHHTTSCSSS--------------------------------------EECT
T ss_pred             CCCCC--CCCEECCCCCCCcCcHHHHhhhhhhccCCCc--------------------------------------cCCC
Confidence            34555  8899999999999999999999999999998                                      8899


Q ss_pred             ccccccCChhhHhhhh-hhccCCC
Q 038358          249 ICLRVFSSGQALGGHK-RCHWEKG  271 (312)
Q Consensus       249 ~C~k~F~~~~~L~~H~-~~H~~~~  271 (312)
                      +|++.|.+...|.+|+ ++|.+|.
T Consensus        61 ~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           61 YCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEeCCHHHHHHhCcccCcCCC
Confidence            9999999999999996 6787653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.1e-14  Score=101.87  Aligned_cols=67  Identities=21%  Similarity=0.345  Sum_probs=62.3

Q ss_pred             CcceecCC--CccccCChHHHHhHhh-hcCCCCCcccccccCCC--CCCCCcCCCCCccccchhhHhHhhhcCc---eec
Q 038358          176 SCRFECNS--CKKVFGSHQALGGHRA-SHKHVKGCFAITRSSDG--CEIDHDHCSDGIVKENVDDERKMMMVLG---HKC  247 (312)
Q Consensus       176 ~k~~~C~~--C~~~F~~~~~L~~H~~-~H~~~k~y~~~~~~C~~--C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C  247 (312)
                      +++|.|..  |++.|.....|..|++ .|.++++|     +|+.  |++.|...        ..|.+|+++|++   |.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~-----~C~~~~C~k~f~~~--------~~L~~H~~~H~~~~~~~C   71 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSF-----SCPEPACGKSFNFK--------KHLKEHMKLHSDTRDYIC   71 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCE-----ECSCTTTCCEESSH--------HHHHHHHHHHHTSCCCSC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCe-----ECCCCCCcCccCCH--------HHHHHHHHHhCCCCCeeC
Confidence            89999997  9999999999999999 79999995     9998  99999994        499999999998   999


Q ss_pred             CccccccC
Q 038358          248 SICLRVFS  255 (312)
Q Consensus       248 ~~C~k~F~  255 (312)
                      ++|++.|.
T Consensus        72 ~~C~k~F~   79 (79)
T 2dlk_A           72 EFSGPSSG   79 (79)
T ss_dssp             CSSSCCCC
T ss_pred             CCCCCCCC
Confidence            99999994

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=4.3e-14  Score=99.17  Aligned_cols=59  Identities=22%  Similarity=0.373  Sum_probs=55.4

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      ++|+|++|            ++.|.....|..|+++|++  +++|+|.+|++.|.....|..|+++|++++||
T Consensus        16 ~~~~C~~C------------~k~f~~~~~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           16 KPYKCDRC------------QASFRYKGNLASHKTVHTG--EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CSBCCTTS------------SCCBSCHHHHHHHHHHHCC--CCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCeECCCC------------CceeCCHHHHHHHHHHcCC--CCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            37888888            8899999999999999998  99999999999999999999999999999984

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=5.8e-14  Score=99.31  Aligned_cols=59  Identities=20%  Similarity=0.413  Sum_probs=55.7

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      ++|+|++|            ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus        17 ~~~~C~~C------------~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           17 RRYKCDEC------------GKSFSHSSDLSKHRRTHTG--EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CSSBCSSS------------CCBCSCHHHHHHHHTTTCC--SCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCEECCCC------------CcccCCHHHHHHHHHHcCC--CcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            37888888            8899999999999999998  99999999999999999999999999999995

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=5.2e-14  Score=98.75  Aligned_cols=61  Identities=25%  Similarity=0.503  Sum_probs=55.1

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCc
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSI  249 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~  249 (312)
                      .+.+  +++|+|.+|++.|.....|..|+++|+++++                                      |.|++
T Consensus        11 ~~~~--~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~--------------------------------------~~C~~   50 (74)
T 2lce_A           11 MTHS--DKPYKCDRCQASFRYKGNLASHKTVHTGEKP--------------------------------------YRCNI   50 (74)
T ss_dssp             CCCC--CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS--------------------------------------EECTT
T ss_pred             ccCC--CCCeECCCCCceeCCHHHHHHHHHHcCCCCC--------------------------------------EECCC
Confidence            3445  8999999999999999999999999999988                                      88999


Q ss_pred             cccccCChhhHhhhhhhccCC
Q 038358          250 CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       250 C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |++.|.....|..|+++|+++
T Consensus        51 C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           51 CGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             TCCEESCHHHHHHHHHHHCCS
T ss_pred             CCchhCCHHHHHHHHHhcCCC
Confidence            999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.46  E-value=3.5e-14  Score=94.21  Aligned_cols=56  Identities=30%  Similarity=0.408  Sum_probs=46.2

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFS  255 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~  255 (312)
                      +++|+|.+|++.|.....|..|+++|++++|                                      |.|++|++.|.
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------------------~~C~~C~~~f~   43 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKP--------------------------------------YKCEFCEYAAA   43 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCC--------------------------------------EECSSSSCEES
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCC--------------------------------------cCCCCCcchhC
Confidence            7899999999999999999999999999988                                      77888888888


Q ss_pred             ChhhHhhhhhhccC
Q 038358          256 SGQALGGHKRCHWE  269 (312)
Q Consensus       256 ~~~~L~~H~~~H~~  269 (312)
                      ....|..|+++|++
T Consensus        44 ~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           44 QKTSLRYHLERHHK   57 (57)
T ss_dssp             SHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHhcC
Confidence            88888888887763

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=3.2e-14  Score=97.41  Aligned_cols=61  Identities=20%  Similarity=0.503  Sum_probs=53.1

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhh-c-CCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCcee
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRAS-H-KHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHK  246 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~-H-~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~  246 (312)
                      ++|.+  +++|.|++|++.|.....|..|++. | .++++                                      |.
T Consensus         3 ~~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~--------------------------------------~~   42 (66)
T 2drp_A            3 FTKEG--EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV--------------------------------------YP   42 (66)
T ss_dssp             CEEEE--TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC--------------------------------------EE
T ss_pred             cccCC--CcceECCCCcchhCCHHHHHHHHHHHcCCCCcC--------------------------------------eE
Confidence            56777  9999999999999999999999998 7 57787                                      78


Q ss_pred             cCccccccCChhhHhhhhhhccC
Q 038358          247 CSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       247 C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |++|++.|.+.+.|..|+++|++
T Consensus        43 C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           43 CPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCCCCccCCHHHHHHHHHHHcC
Confidence            88888888888888888888775

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.3e-13  Score=97.52  Aligned_cols=61  Identities=31%  Similarity=0.551  Sum_probs=53.0

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCc
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSI  249 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~  249 (312)
                      .+.+  +++|.|++|++.|.....|..|+++|+++++                                      |.|++
T Consensus        12 ~~~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------------------~~C~~   51 (77)
T 2cot_A           12 QQRE--RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP--------------------------------------YKCDE   51 (77)
T ss_dssp             CCCC--SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS--------------------------------------EECSS
T ss_pred             cCCC--CCCEECCCCCcccCCHHHHHHHHHHcCCCcC--------------------------------------eeCCC
Confidence            4555  8999999999999999999999999999988                                      77888


Q ss_pred             cccccCChhhHhhhhhhccCC
Q 038358          250 CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       250 C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |++.|.....|..|+++|+++
T Consensus        52 C~~~f~~~~~L~~H~~~H~~~   72 (77)
T 2cot_A           52 CGKAFIQRSHLIGHHRVHTGS   72 (77)
T ss_dssp             SCCEESSHHHHHHHGGGSCCC
T ss_pred             CCCccCCHHHHHHHHHHhCCC
Confidence            888888888888888888765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=8.1e-14  Score=98.76  Aligned_cols=61  Identities=20%  Similarity=0.394  Sum_probs=53.6

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCC---CCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceec
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKH---VKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKC  247 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~---~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C  247 (312)
                      |++  +++|+|++|++.|.....|..|+++|.+   +++                                      |.|
T Consensus         2 h~~--~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~--------------------------------------~~C   41 (78)
T 2d9h_A            2 SSG--SSGLQCEICGFTCRQKASLNWHQRKHAETVAALR--------------------------------------FPC   41 (78)
T ss_dssp             CCS--CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC--------------------------------------EEC
T ss_pred             CCC--CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc--------------------------------------cCC
Confidence            666  9999999999999999999999999986   666                                      899


Q ss_pred             CccccccCChhhHhhhhh-hccCCC
Q 038358          248 SICLRVFSSGQALGGHKR-CHWEKG  271 (312)
Q Consensus       248 ~~C~k~F~~~~~L~~H~~-~H~~~~  271 (312)
                      ++|++.|.....|..|++ .|.++.
T Consensus        42 ~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A           42 EFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             TTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCchhCCHHHHHHHHHHhCCCCC
Confidence            999999999999999995 565443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.41  E-value=1.8e-13  Score=90.72  Aligned_cols=55  Identities=20%  Similarity=0.407  Sum_probs=44.4

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccCCh
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSG  257 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~~~  257 (312)
                      ||.|++|++.|.....|..|+++|+++++                                      |.|++|++.|.+.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------------------~~C~~C~~~f~~~   42 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP--------------------------------------YHCTYCNFSFKTK   42 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC--------------------------------------EECSSSSCEESSH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC--------------------------------------ccCCCCCchhcCH
Confidence            57788888888888888888888887777                                      7788888888888


Q ss_pred             hhHhhhhhhccCC
Q 038358          258 QALGGHKRCHWEK  270 (312)
Q Consensus       258 ~~L~~H~~~H~~~  270 (312)
                      ..|..|+++|+++
T Consensus        43 ~~l~~H~~~h~~~   55 (57)
T 1bbo_A           43 GNLTKHMKSKAHS   55 (57)
T ss_dssp             HHHHHHHHSSSSC
T ss_pred             HHHHHHHHHhccc
Confidence            8888888888764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.2e-13  Score=103.28  Aligned_cols=68  Identities=13%  Similarity=0.065  Sum_probs=58.4

Q ss_pred             CcccccccccchhccCCCCCCCccccCchhHHhHHh-hhcC-CCCcceecCCCccccCChHHHHhH-hhhcCCCCCcccc
Q 038358          134 VEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE-VNLG-GVSCRFECNSCKKVFGSHQALGGH-RASHKHVKGCFAI  210 (312)
Q Consensus       134 ~~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~-~H~~-~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~~k~y~~~  210 (312)
                      +++|.|++|            ++.|.....|..|++ +|++ .+++||.|++||+.|.....|..| +++|++++||   
T Consensus        16 ekpy~C~~C------------gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy---   80 (102)
T 2ghf_A           16 EGGYECKYC------------TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENF---   80 (102)
T ss_dssp             CSSEECSSC------------SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCE---
T ss_pred             CcCcCCCCC------------CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCe---
Confidence            348999998            889999999999997 5832 128999999999999999999999 8999999995   


Q ss_pred             cccCCCCC
Q 038358          211 TRSSDGCE  218 (312)
Q Consensus       211 ~~~C~~C~  218 (312)
                        +|.++.
T Consensus        81 --~C~~~~   86 (102)
T 2ghf_A           81 --KLTMVK   86 (102)
T ss_dssp             --EEEECC
T ss_pred             --eCCccc
Confidence              776643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.8e-13  Score=94.85  Aligned_cols=58  Identities=14%  Similarity=0.194  Sum_probs=55.0

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +|+|++|            ++.|.....|..|+++|++  +++|+|++|++.|.....|..|+++|++++|.
T Consensus         9 ~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            9 PEKCSEC------------SYSCSSKAALRIHERIHCT--DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SEECSSS------------SCEESSHHHHHHHHGGGCC--SCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CeECCCC------------CcccCCHHHHHHHHHHcCC--CCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            7888888            8899999999999999998  99999999999999999999999999999873

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.2e-13  Score=90.48  Aligned_cols=57  Identities=28%  Similarity=0.520  Sum_probs=49.2

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSS  256 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~~  256 (312)
                      +||.|++|++.|.....|..|+++|+++++                                      |.|++|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------------------~~C~~C~~~f~~   42 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP--------------------------------------YPCGLCNRAFTR   42 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS--------------------------------------EECTTTCCEESS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC--------------------------------------ccCCCCCCccCC
Confidence            578999999999999999999999988887                                      789999999999


Q ss_pred             hhhHhhhh-hhccCCC
Q 038358          257 GQALGGHK-RCHWEKG  271 (312)
Q Consensus       257 ~~~L~~H~-~~H~~~~  271 (312)
                      ...|..|+ ++|.++.
T Consensus        43 ~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A           43 RDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             HHHHHHHHTTTSCCSS
T ss_pred             HHHHHHHHHHHcCCcC
Confidence            99999996 6887653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.6e-13  Score=95.66  Aligned_cols=63  Identities=19%  Similarity=0.373  Sum_probs=56.7

Q ss_pred             hhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          130 NVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       130 ~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      ++|.++ +|+|++|            ++.|.....|..|+++|.+  +++|+|++|++.|.....|..|+++|+++.+
T Consensus         7 ~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCVEC------------GKAFSRSSILVQHQRVHTG--EKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECSSS------------CCEESSHHHHHHHHHGGGC--SCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCCCC------------CCccCCHHHHHHHHHhcCC--CCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            456555 7899888            8899999999999999998  9999999999999999999999999998753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=2.5e-13  Score=97.99  Aligned_cols=57  Identities=23%  Similarity=0.294  Sum_probs=52.6

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHh-hhcCCCC
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHR-ASHKHVK  205 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~-~~H~~~k  205 (312)
                      ++|.|++|            ++.|.....|..|+++|++  ++||.|++|++.|.....|.+|+ ++|++|.
T Consensus        27 ~~h~C~~C------------gk~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVC------------GESFASKGAQERHLRLLHA--AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTS------------CCEESSHHHHHHHHHTTSC--SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECCCC------------CCCcCcHHHHhhhhhhccC--CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            47889998            8899999999999999999  99999999999999999999997 5798874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1e-13  Score=102.90  Aligned_cols=52  Identities=19%  Similarity=0.287  Sum_probs=48.3

Q ss_pred             Ccccc-CchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          155 TGSFQ-QGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       155 ~k~F~-~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      ++.|. ....|..|+++|++ .+++|.|.+|++.|.....|..|+++|++++|+
T Consensus        31 ~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           31 NVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            88999 99999999999874 268999999999999999999999999999984

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.39  E-value=3.6e-13  Score=89.21  Aligned_cols=56  Identities=16%  Similarity=0.262  Sum_probs=52.0

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      ||+|++|            ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C------------~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEEC------------GIRXKKPSMLKKHIRTHTD--VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTT------------CCBCSSHHHHHHHHHHTSS--CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCC------------cCcCCCHHHHHHHHHhcCC--CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            4677777            8899999999999999998  999999999999999999999999999875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=5e-13  Score=98.89  Aligned_cols=49  Identities=18%  Similarity=0.167  Sum_probs=45.8

Q ss_pred             Cccc-cCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhH-hhhcCCCCCc
Q 038358          155 TGSF-QQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGH-RASHKHVKGC  207 (312)
Q Consensus       155 ~k~F-~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~~k~y  207 (312)
                      ++.| ....+|..|+++| +  +++|.|.+|++.|.....|..| +++|++ +||
T Consensus        41 ~k~F~~~~~~L~~H~~~h-~--~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p~   91 (96)
T 2ctd_A           41 QAVGRKTIEGLKKHMENC-K--QEMFTCHHCGKQLRSLAGMKYHVMANHNS-LPS   91 (96)
T ss_dssp             CSCEESSHHHHHHHHHHH-C--CCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CSS
T ss_pred             CCCcccCHHHHHHHHHHH-C--CCCeECCCCCCeeCCHHHHHHHhHHhcCC-CCC
Confidence            8899 9999999999999 8  9999999999999999999999 889986 454

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=3.2e-13  Score=94.30  Aligned_cols=66  Identities=29%  Similarity=0.468  Sum_probs=52.6

Q ss_pred             hHHhHH-hhhcCCCCcceecC--CCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHh
Q 038358          163 QVQDTN-EVNLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKM  239 (312)
Q Consensus       163 ~L~~H~-~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~  239 (312)
                      .|..|+ .+|.+  +++|.|+  .|++.|.....|..|+++|.++++                                 
T Consensus         5 ~~~~~~~~~~~~--~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~---------------------------------   49 (73)
T 1f2i_G            5 PMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP---------------------------------   49 (73)
T ss_dssp             ---CTTSCCCCC--CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC---------------------------------
T ss_pred             CccchhhccCCC--CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC---------------------------------
Confidence            455554 35666  9999997  599999999999999999999988                                 


Q ss_pred             hhcCceecCccccccCChhhHhhhhhhcc
Q 038358          240 MMVLGHKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       240 ~~H~~~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                           |.|++|++.|.....|..|+++|+
T Consensus        50 -----~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           50 -----FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             -----EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             -----eECCCCCchhCCHHHHHHHHHhcC
Confidence                 677788888888888888887774

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=3.5e-13  Score=100.69  Aligned_cols=43  Identities=14%  Similarity=0.183  Sum_probs=34.0

Q ss_pred             CcceecCCCccccCChHHHHhHhh-hc---CCCCCcccccccCCCCCCCCcC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRA-SH---KHVKGCFAITRSSDGCEIDHDH  223 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~-~H---~~~k~y~~~~~~C~~C~~~f~~  223 (312)
                      ++||.|++|++.|.....|..|++ +|   .+++||     +|.+||+.|..
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf-----~C~~Cgk~F~~   62 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSY-----VCVECNFLTKR   62 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCE-----EETTTTEEESS
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCc-----CCCCCCcccCC
Confidence            999999999999999999999997 59   567872     44444444444

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.34  E-value=7.4e-13  Score=87.67  Aligned_cols=55  Identities=16%  Similarity=0.318  Sum_probs=49.3

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      ++|+|++|            ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|++
T Consensus         3 ~~~~C~~C------------~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYC------------GKFFRSNYYLNIHLRTHTG--EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTT------------CCBCSCHHHHHHHHHHHHC--CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCC------------cchhCChHHHHHHHHHcCC--CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46788888            8899999999999999999  9999999999999999999999999864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.8e-14  Score=99.46  Aligned_cols=68  Identities=16%  Similarity=0.175  Sum_probs=46.4

Q ss_pred             chhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhh
Q 038358          161 GIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMM  240 (312)
Q Consensus       161 ~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~  240 (312)
                      ...|..|+++|.+  +++|.|++|++.|.....|..       +++|     .|+.|++.|...+        .|.+|++
T Consensus         3 ~~~l~~H~~~h~~--~~~~~C~~C~k~f~~~~~l~~-------~~~~-----~C~~C~~~f~~~~--------~l~~H~~   60 (73)
T 2ctu_A            3 SGSSGKRQKIHLG--DRSQKCSKCGIIFIRRSTLSR-------RKTP-----MCEKCRKDSCQEA--------ALNKDEG   60 (73)
T ss_dssp             CCSCCCCCCCCCC--CSEEECSSSCCEEECCCCCCC-------SSSC-----CCHHHHHTCSCCC--------SSCCCSS
T ss_pred             chhHHHHHHHhCC--CCCeeCCcccchhCCHHHhCc-------CCCC-----CCCCCChhhcCHH--------HHHHHHH
Confidence            4567788888887  888888888888888777766       5663     6666666666544        5556666


Q ss_pred             hcCc---eecCcc
Q 038358          241 MVLG---HKCSIC  250 (312)
Q Consensus       241 ~H~~---~~C~~C  250 (312)
                      +|++   |.|++|
T Consensus        61 ~H~~~~~~~C~~C   73 (73)
T 2ctu_A           61 NESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCSSCCCC
T ss_pred             hhcCCCCCCCCCC
Confidence            6655   556555

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.3e-12  Score=92.21  Aligned_cols=68  Identities=19%  Similarity=0.235  Sum_probs=55.3

Q ss_pred             HHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHh-hhcCCCCcceecCCCccccCChHHHHhHhhhc-C
Q 038358          126 TSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE-VNLGGVSCRFECNSCKKVFGSHQALGGHRASH-K  202 (312)
Q Consensus       126 ~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~-~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H-~  202 (312)
                      ..|+++|+++ +|+|++|            ++.|.....|..|++ .|.+ .+++|+|++|++.|.....|..|+++| .
T Consensus         4 ~~H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~~h~~-~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYIC------------HARFTQSGTMKMHILQKHTE-NVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCSCCCSEECTTT------------CCEESCHHHHHHHHHHHSSS-SCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccccccCCCCCeECCCc------------CchhCCHHHHHHHHHHhcCC-CCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3456666655 7888888            889999999999997 6765 138999999999999999999999974 4


Q ss_pred             CCCC
Q 038358          203 HVKG  206 (312)
Q Consensus       203 ~~k~  206 (312)
                      .+.|
T Consensus        71 ~~~p   74 (77)
T 2ct1_A           71 YSGP   74 (77)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            4544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.6e-12  Score=88.82  Aligned_cols=60  Identities=12%  Similarity=0.138  Sum_probs=53.3

Q ss_pred             hhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhh-h-cCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          130 NVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEV-N-LGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       130 ~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~-H-~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      ++|+++ +|.|++|            ++.|.....|..|++. | .+  +++|.|++|++.|.....|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C------------~k~f~~~~~l~~H~~~~H~~~--~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVC------------SRVYTHISNFCRHYVTSHKRN--VKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTT------------CCEESSHHHHHHHHHHHSSSS--CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCC------------cchhCCHHHHHHHHHHHcCCC--CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            355555 8999998            8899999999999998 6 46  8999999999999999999999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=3e-12  Score=85.68  Aligned_cols=56  Identities=16%  Similarity=0.320  Sum_probs=50.8

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHh-hhcCCCC
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHR-ASHKHVK  205 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~-~~H~~~k  205 (312)
                      +|+|++|            ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+ ++|.++.
T Consensus         2 ~~~C~~C------------~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            2 SFVCEVC------------TRAFARQEHLKRHYRSHTN--EKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CBCCTTT------------CCCBSCHHHHHHHHHTTTS--SCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             cCcCCCC------------ccccCCHHHHHHHHHHhCC--CCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            5677777            8899999999999999998  99999999999999999999997 6888764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.25  E-value=1.1e-12  Score=102.18  Aligned_cols=54  Identities=17%  Similarity=0.315  Sum_probs=49.0

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      ++|.|++|            ++.|.....|..|+++|    ++||.|++|++.|.....|..|+++|+++
T Consensus        73 ~~~~C~~C------------~k~f~~~~~l~~H~~~H----~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           73 SQFVCPLC------------LMPFSSSVSLKQHIRYT----EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSEECTTT------------CCEESSHHHHHHHHHHT----CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCeECCCC------------CcccCCHhHHHHHHHHC----CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            36667666            88999999999999999    58999999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=6.2e-12  Score=88.85  Aligned_cols=64  Identities=19%  Similarity=0.283  Sum_probs=54.7

Q ss_pred             ccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCC-CCcceecCCCccccCChHHHHhHh-hhcCCCCCc
Q 038358          132 MTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGG-VSCRFECNSCKKVFGSHQALGGHR-ASHKHVKGC  207 (312)
Q Consensus       132 ~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~-~~k~~~C~~C~~~F~~~~~L~~H~-~~H~~~k~y  207 (312)
                      |+++ +|+|++|            ++.|.....|..|+++|++. ++++|.|.+|++.|.....|..|+ ..|.++++.
T Consensus         2 h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEIC------------GFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSS------------CCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCC------------CCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4444 7889888            88999999999999999831 179999999999999999999999 568888774

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=6e-12  Score=86.08  Aligned_cols=55  Identities=18%  Similarity=0.248  Sum_probs=47.5

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecC-cccccc
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCS-ICLRVF  254 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~-~C~k~F  254 (312)
                      ++||.|..|++.|. ...|..|+++ ++++|                                      |.|+ +||+.|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p--------------------------------------~~C~~~C~k~f   47 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP--------------------------------------VACPNQCGVGT   47 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSE--------------------------------------EECTTCCSCCE
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcC--------------------------------------ccCCcccCccc
Confidence            89999999999999 9999999999 99988                                      6777 788888


Q ss_pred             CChhhHhhhhhhccCC
Q 038358          255 SSGQALGGHKRCHWEK  270 (312)
Q Consensus       255 ~~~~~L~~H~~~H~~~  270 (312)
                      ...+.|..|+++|..+
T Consensus        48 ~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A           48 VAREDLPGHLKDSCNT   63 (66)
T ss_dssp             EETTTHHHHHHTTSSS
T ss_pred             ccHHHHHHHHHhhccc
Confidence            8888888888877643

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=9.7e-12  Score=91.17  Aligned_cols=54  Identities=20%  Similarity=0.215  Sum_probs=50.3

Q ss_pred             CccccCchhHHhHHhh-hcCCCCcc--------eecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          155 TGSFQQGIQVQDTNEV-NLGGVSCR--------FECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~-H~~~~~k~--------~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      ++.|.....|..|+++ |.+  +++        |.|.+|++.|.....|..|+++|++++||     +|+
T Consensus        32 ~k~f~~~~~L~~H~~~~H~~--~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   94 (95)
T 2ej4_A           32 DRTFSTMHELVTHVTMEHVG--GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSG-----PSS   94 (95)
T ss_dssp             CCCCSSHHHHHHHHHHTTTC--CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCC-----SSC
T ss_pred             ccccCCHHHHHHHHHHhccC--CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCC-----CCC
Confidence            8899999999999998 887  777        99999999999999999999999999995     775

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.6e-11  Score=85.44  Aligned_cols=53  Identities=19%  Similarity=0.438  Sum_probs=49.4

Q ss_pred             ccccc--cccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcC
Q 038358          136 DHEVA--ACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       136 ~~~C~--~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      +|.|+  .|            ++.|.....|..|+++|.+  +++|.|++|++.|.....|..|+++|+
T Consensus        19 ~~~C~~~~C------------~k~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           19 PYACPVESC------------DRRFSRSDELTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CEECSSTTB------------CCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCcCCCC------------CCccCCHHHHHHHHHhhCC--CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            78886  48            8899999999999999998  999999999999999999999999985

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.8e-12  Score=78.67  Aligned_cols=45  Identities=24%  Similarity=0.444  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2eml_A            2 SSGSSGTG--EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEECSSSCCEESSHHHHHHHHGGGSSCCCS-----CSSCC
T ss_pred             CccCCcCC--CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.17  E-value=9.5e-12  Score=81.52  Aligned_cols=51  Identities=12%  Similarity=0.109  Sum_probs=49.0

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      ++.|.....|..|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQS--EQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTS--SCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCC--CCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            6789999999999999998  99999999999999999999999999999985

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.17  E-value=9.7e-12  Score=78.43  Aligned_cols=45  Identities=24%  Similarity=0.405  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2el4_A            2 SSGSSGTG--VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSSCEESSHHHHHHHGGGSSSCCCS-----CCTTC
T ss_pred             ccccCCCC--CCceECCCCCchhCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            57889998  99999999999999999999999999999995     88876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.7e-12  Score=78.46  Aligned_cols=45  Identities=27%  Similarity=0.492  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTG--KKPYKCNECGKVFTQNSHLARHRGIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSC--CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC-----SCCCC
T ss_pred             CCCcCCCC--CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.2e-11  Score=78.04  Aligned_cols=45  Identities=24%  Similarity=0.442  Sum_probs=41.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~c   46 (46)
T 2emf_A            2 SSGSSGTG--GKHFECTECGKAFTRKSTLSMHQKIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCSSSSS--SCCEECSSSCCEESCHHHHHHHGGGTSCSSCS-----CCCCC
T ss_pred             ccccccCC--CCCeECCCCCchhCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889988  99999999999999999999999999999995     88876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.17  E-value=9.9e-12  Score=78.43  Aligned_cols=45  Identities=18%  Similarity=0.381  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|+|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2em0_A            2 SSGSSGMG--EKTWKCRECDMCFSQASSLRLHQNVHVGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS-----CSSCC
T ss_pred             CCcCccCC--CcCeECCCCCcccCCHHHHHHHHHHcCCCCCc-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.17  E-value=9e-12  Score=78.66  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2emk_A            2 SSGSSGTG--EKPYECKECGKAFSQTTHLIQHQRVHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSS--SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCS-----SCCCC
T ss_pred             CCCCccCC--CCceECCCCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.4e-12  Score=78.49  Aligned_cols=45  Identities=22%  Similarity=0.319  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2emm_A            2 SSGSSGTG--ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCSCSSC--CCSEECSSSCCEESSHHHHHHHHHHHSCCCTT-----SSSCC
T ss_pred             CCcCCcCC--CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=78.35  Aligned_cols=45  Identities=27%  Similarity=0.510  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|+|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLANHQRIHTGVKPS-----GPSSG   46 (46)
T ss_dssp             CCSSCCCC--CCSSEETTTTEECSSHHHHHHHHGGGSCCCSC-----SSCCC
T ss_pred             CCCCCCCC--CCCeECCCcChhhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.17  E-value=9.7e-12  Score=78.46  Aligned_cols=45  Identities=27%  Similarity=0.516  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~c   46 (46)
T 2ema_A            2 SSGSSGTG--EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CSCSSCTT--SCCEECSSSCCEESSHHHHHHHHTGGGCCCCC-----SSSCC
T ss_pred             CCccCCCC--CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=78.32  Aligned_cols=45  Identities=20%  Similarity=0.347  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTG--EKLYNCKECGKSFSRAPCLLKHERLHSGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCSSC--CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCC-----CCCCC
T ss_pred             CCcccCCC--CCCeECCCCCCccCchHHHHHHHHhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.2e-11  Score=77.95  Aligned_cols=45  Identities=20%  Similarity=0.344  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTG--EKPYICAECGKAFTIRSNLIKHQKIHTKQKPS-----GPSSG   46 (46)
T ss_dssp             CSSCTTSS--CCSEECSSSCCEESSHHHHHHHHHHTSCCCCS-----SCSCC
T ss_pred             CcccCCCC--CcCeECCCCChhhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            58889998  99999999999999999999999999999995     88776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=78.27  Aligned_cols=45  Identities=24%  Similarity=0.448  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ene_A            2 SSGSSGTG--EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCSSCCC--SSSEECSSSCCEESSHHHHHHHHTTTCCCCCC-----SCCCC
T ss_pred             CcccCCCC--CCCeECCCCCchhCChHHHHHHHhhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.4e-11  Score=77.66  Aligned_cols=45  Identities=22%  Similarity=0.385  Sum_probs=41.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2eme_A            2 SSGSSGSG--EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCTTCC--CCSEECSSSCCEESSHHHHHHHHGGGCCCSCC-----SSCCC
T ss_pred             CCCCCCCC--CCCeECCCCChhhCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            58889998  99999999999999999999999999999995     88877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.4e-12  Score=79.37  Aligned_cols=45  Identities=27%  Similarity=0.448  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSG--ERPYGCNECGKNFGRHSHLIEHLKRHFREKSS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSC--CCCEECSSSCCEESSHHHHHHHHHHHHSTTSS-----CCSCC
T ss_pred             CCCCCCCC--CCCEEccccCcccCCHHHHHHHHHHHcCCCCC-----CCCCC
Confidence            58889998  99999999999999999999999999999995     88776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.1e-11  Score=78.20  Aligned_cols=45  Identities=16%  Similarity=0.295  Sum_probs=41.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2em5_A            2 SSGSSGSS--TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCCC--SCSEECSSSCCEESSHHHHHHHHTTTSCSCCS-----SCCCC
T ss_pred             CCcCCCCC--CCCeECCcCCCccCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            58889998  99999999999999999999999999999995     88876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=78.32  Aligned_cols=45  Identities=22%  Similarity=0.431  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|+|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2emy_A            2 SSGSSGTG--ENPYECHECGKAFSRKYQLISHQRTHAGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCCS--SCCEECSSSCCEESSHHHHHHHHHHHTTSCCS-----CSSCC
T ss_pred             CCCCCCCC--CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889988  99999999999999999999999999999995     88776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=78.15  Aligned_cols=45  Identities=22%  Similarity=0.435  Sum_probs=41.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTG--EKPYKCHECGKVFRRNSHLARHQLIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCTTC--CCCEECTTTCCEESSHHHHHHHHTTTCCCCCS-----CCSCC
T ss_pred             CCCcCCCC--CCCeECCCCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889988  99999999999999999999999999999995     88876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=77.22  Aligned_cols=44  Identities=25%  Similarity=0.396  Sum_probs=40.8

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      |+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   44 (44)
T 2emx_A            1 GSSGSSG--EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPS-----GPSSG   44 (44)
T ss_dssp             CCCCCSS--CCCEECSSSSCEESSHHHHHHHHHHHTSSCSC-----SCCCC
T ss_pred             CCCCcCC--CcCccCCCCCcccCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            6788988  99999999999999999999999999999995     88876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=78.14  Aligned_cols=45  Identities=24%  Similarity=0.431  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSG--EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCSSS--SCSEECSSSCCEESSHHHHHHHHHHHSSSSCS-----SCCCC
T ss_pred             CCcccCCC--CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.16  E-value=3.2e-11  Score=83.74  Aligned_cols=54  Identities=30%  Similarity=0.540  Sum_probs=46.5

Q ss_pred             CcceecCC--CccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCc--cc
Q 038358          176 SCRFECNS--CKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSI--CL  251 (312)
Q Consensus       176 ~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~--C~  251 (312)
                      .++|.|..  |++.|.....|..|+++|+++++                                      |.|++  |+
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~--------------------------------------~~C~~~~C~   56 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP--------------------------------------FSCSWKGCE   56 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS--------------------------------------EECCCTTCC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC--------------------------------------ccCCCCCCC
Confidence            78999988  99999999999999999999998                                      67754  77


Q ss_pred             cccCChhhHhhhhhhc
Q 038358          252 RVFSSGQALGGHKRCH  267 (312)
Q Consensus       252 k~F~~~~~L~~H~~~H  267 (312)
                      +.|.....|..|+++|
T Consensus        57 k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           57 RRFARSDELSRHRRTH   72 (72)
T ss_dssp             CEESSHHHHHHHTTTC
T ss_pred             cccCCHHHHHhHhhcC
Confidence            7777777777777766

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.5e-11  Score=77.55  Aligned_cols=45  Identities=20%  Similarity=0.338  Sum_probs=41.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2em7_A            2 SSGSSGTG--EKPYKCEECGKGFICRRDLYTHHMVHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCSSSC--CCSEECSSSCCEESCHHHHHHHGGGGTTCCCS-----STTCC
T ss_pred             CCCCCCCC--CcCccCCCccchhCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            37889998  99999999999999999999999999999995     88876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.3e-11  Score=77.86  Aligned_cols=45  Identities=22%  Similarity=0.381  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTG--EKPYECSICGKSFTKKSQLHVHQQIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CSSSCSSC--CCSEECSSSCCEESSHHHHHHHHHTTSSCCSC-----CSCCC
T ss_pred             CCCCCCCC--CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            58889998  99999999999999999999999999999995     88876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.5e-11  Score=77.62  Aligned_cols=45  Identities=22%  Similarity=0.415  Sum_probs=41.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2en1_A            2 SSGSSGSG--EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CSTTCCCC--CCSEEETTTTEEESSHHHHHHHGGGGSCCCCS-----CCCCC
T ss_pred             CcccCCCC--CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            58889998  99999999999999999999999999999995     88876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.2e-11  Score=78.05  Aligned_cols=45  Identities=18%  Similarity=0.357  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2eov_A            2 SSGSSGTG--EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSC-----CSCCC
T ss_pred             CCCCCCCC--CCCccCCccChhhCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            48889998  99999999999999999999999999999995     88876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=78.04  Aligned_cols=45  Identities=22%  Similarity=0.404  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|+|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTG--EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCSSS--SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSS-----SCCCC
T ss_pred             CCCCCCCC--CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889988  99999999999999999999999999999995     88876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=77.98  Aligned_cols=45  Identities=20%  Similarity=0.304  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2eop_A            2 SSGSSGTG--EKPHECRECGKSFSFNSQLIVHQRIHTGENPS-----GPSSG   46 (46)
T ss_dssp             CCCCSCCC--CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCS-----CCCCC
T ss_pred             CCccccCC--CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.6e-12  Score=78.49  Aligned_cols=45  Identities=22%  Similarity=0.388  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2emp_A            2 SSGSSGTG--VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCSCSSC--CCSEECSSSCCEESCHHHHHHHHHHHHCCSCC-----SCCCC
T ss_pred             CcccccCC--CcCeECCCCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            48889998  99999999999999999999999999999995     88876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.15  E-value=1.4e-11  Score=77.67  Aligned_cols=45  Identities=20%  Similarity=0.343  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2em9_A            2 SSGSSGTG--EKPYNCKECGKSFRWASCLLKHQRVHSGEKPS-----GPSSG   46 (46)
T ss_dssp             CSCCSCCC--CCSEECSSSCCEESSHHHHHHHGGGGTSCCCC-----STTCC
T ss_pred             CCCCCCCC--CcCeECCccccccCChHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.2e-11  Score=77.93  Aligned_cols=45  Identities=22%  Similarity=0.291  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2en8_A            2 SSGSSGSG--EKSHTCDECGKNFCYISALRIHQRVHMGEKCS-----GPSSG   46 (46)
T ss_dssp             CCCCCCCC--CSSEECTTTCCEESSHHHHHHHHTTTCCSCSS-----CCSCC
T ss_pred             CccccCCC--CCCeECCCcCcccCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.7e-12  Score=78.47  Aligned_cols=45  Identities=20%  Similarity=0.344  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~c   46 (46)
T 2emh_A            2 SSGSSGTG--ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCSCSC--CCSEECTTTCCEESSHHHHHHHHHHHHCSSCS-----SSCCC
T ss_pred             CCCCCCCC--CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.1e-11  Score=78.20  Aligned_cols=45  Identities=20%  Similarity=0.392  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTG--EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEECTTTCCEESSSHHHHTTGGGGSSCCSS-----CSCCC
T ss_pred             CCCCCCCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889988  99999999999999999999999999999995     88876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.5e-11  Score=77.62  Aligned_cols=45  Identities=16%  Similarity=0.271  Sum_probs=41.5

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~h~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2elz_A            2 SSGSSGSV--EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS-----GPSSG   46 (46)
T ss_dssp             CCCSCCCC--CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC-----CSCCC
T ss_pred             CCCCCCCC--CCCeeCcccCchhCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            37888988  99999999999999999999999999999995     88876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.3e-11  Score=77.87  Aligned_cols=45  Identities=22%  Similarity=0.465  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSG--EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPS-----GPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSCCEESSHHHHHHHHHHHTCCCSS-----CSSCC
T ss_pred             CCccccCC--CcCeECCCCCCeeCChHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.15  E-value=1.3e-11  Score=77.91  Aligned_cols=45  Identities=24%  Similarity=0.384  Sum_probs=41.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ely_A            2 SSGSSGTG--EKPFKCVECGKGFSRRSALNVHHKLHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCCC--CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSC-----SCCCC
T ss_pred             CCCCCCCC--CCCcccCccCcccCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            37889998  99999999999999999999999999999995     88876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.5e-11  Score=77.60  Aligned_cols=44  Identities=27%  Similarity=0.488  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      |+++|.+  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2epz_A            3 SGSSGTG--EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCSSCCC--CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC-----SSCCC
T ss_pred             CCCCcCC--CCCeECCCCCceeCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            7889988  99999999999999999999999999999995     88876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.3e-11  Score=77.79  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2epw_A            2 SSGSSGTG--EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHS-----GPSSG   46 (46)
T ss_dssp             CCCCCCCC--CCSEECSSSCCEESSSHHHHHHHHHCCSCCCS-----CCCCC
T ss_pred             cCcccCCC--CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=77.97  Aligned_cols=45  Identities=22%  Similarity=0.440  Sum_probs=41.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTG--EKPYKCNECGKAFSQTSKLARHQRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CSSCCCSS--CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCC-----CSCCC
T ss_pred             CCCcCCCC--CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=7.7e-13  Score=92.00  Aligned_cols=67  Identities=12%  Similarity=0.163  Sum_probs=54.8

Q ss_pred             hHHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          125 VTSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       125 ~~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      +..|+++|.++ +|.|++|            ++.|.....|..         +++|.|++|++.|.....|..|+++|++
T Consensus         6 l~~H~~~h~~~~~~~C~~C------------~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKC------------GIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSS------------CCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcc------------cchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence            34455666655 7888888            667776666665         4799999999999999999999999999


Q ss_pred             CCCcccccccCCCC
Q 038358          204 VKGCFAITRSSDGC  217 (312)
Q Consensus       204 ~k~y~~~~~~C~~C  217 (312)
                      +++|     +|++|
T Consensus        65 ~~~~-----~C~~C   73 (73)
T 2ctu_A           65 KKTS-----GPSSG   73 (73)
T ss_dssp             CCCS-----SCCCC
T ss_pred             CCCC-----CCCCC
Confidence            9995     99987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.8e-11  Score=77.28  Aligned_cols=45  Identities=22%  Similarity=0.350  Sum_probs=41.5

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAG--EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPS-----GPSSG   46 (46)
T ss_dssp             CCSSCSSC--CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS-----CCCCC
T ss_pred             CCCcCcCC--CCCcCCCccChhhCChHHHHHHHHHhCCCCCC-----CCCCC
Confidence            37888998  99999999999999999999999999999995     88876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=1.9e-11  Score=77.12  Aligned_cols=45  Identities=20%  Similarity=0.384  Sum_probs=41.4

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|..|
T Consensus         2 ~h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2el6_A            2 SSGSSGAG--VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPS-----GPSSG   46 (46)
T ss_dssp             CSCCSSCC--CCSEECSSSSCEESSHHHHHHHHGGGCCSSCC-----SCCCC
T ss_pred             CCCCCCCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            36788988  99999999999999999999999999999995     88876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.1e-11  Score=76.92  Aligned_cols=45  Identities=22%  Similarity=0.357  Sum_probs=41.5

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2enc_A            2 SSGSSGSG--EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPS-----GPSSG   46 (46)
T ss_dssp             CCSSCCCC--CCSEECSSSCCEESSHHHHHHHHHHSCCSSCC-----SSCCC
T ss_pred             CCCCCCCC--CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCC-----CCCCC
Confidence            37888988  99999999999999999999999999999995     88876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=78.31  Aligned_cols=45  Identities=27%  Similarity=0.480  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLARHRRVHTGGKPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCCC--CSSEECSSSCCEESSSHHHHHHTHHHHSCCCS-----CSCCC
T ss_pred             CcCcCCCC--CCCeECCcCCchhCCHHHHHHHHHhcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=77.49  Aligned_cols=45  Identities=22%  Similarity=0.457  Sum_probs=41.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~h~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2en6_A            2 SSGSSGSG--EKPYGCNECGKTFSQKSILSAHQRTHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCSCCCCS--SCCEEETTTTEEESSHHHHHHHHHHHSSCCCS-----SSCCC
T ss_pred             CCCCccCC--CcCeECCCCCcccCchHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.7e-11  Score=77.27  Aligned_cols=45  Identities=18%  Similarity=0.362  Sum_probs=41.5

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTG--EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPS-----GPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEEETTTTEEESCHHHHHHHHTTSCSCCSS-----CCSCC
T ss_pred             CCCcCCCC--CCCeECCCCCCccCCHHHHHHHHHhhCCCCCC-----CCCCC
Confidence            37889988  99999999999999999999999999999995     88876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.9e-11  Score=77.10  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=41.4

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTG--EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCSSSSC--CCSEECSSSCCEESSHHHHHHHHTTTTTSCCC-----CTTCC
T ss_pred             CCCCCCCC--CCCeECCCCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     78764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=8.7e-11  Score=85.99  Aligned_cols=68  Identities=18%  Similarity=0.177  Sum_probs=54.7

Q ss_pred             cccCccccccCCChHHHHHHHHh-CCCCC-CCCCCCCCCCCCCCCcchhhHHHhhhccCcccccccccchhccCCCCCCC
Q 038358           78 TRPCSECGKKFWSWKALFGHMRC-HPERQ-WRGINPPPNFRRPASPVKEVTSVENVMTVEDHEVAACLLMLANGDVGVGT  155 (312)
Q Consensus        78 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~-~~C~~c~~~f~c~~c~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~~~C~  155 (312)
                      .|.|..|++.|.....|..|+++ |.+++ ..+..|                       ..|.|++|            +
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-----------------------~~~~C~~C------------~   69 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----------------------YWEECPRE------------G   69 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-----------------------CCTTCSST------------T
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccce-----------------------eccCCCCC------------C
Confidence            47899999999999999999998 88642 111111                       12556666            8


Q ss_pred             ccccCchhHHhHHhhhcCCCCcceecC
Q 038358          156 GSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       156 k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      +.|.....|..|+++|++  ++||.|+
T Consensus        70 k~f~~~~~L~~H~~~H~~--~k~~~C~   94 (95)
T 2ej4_A           70 KSFKAKYKLVNHIRVHTG--EKSGPSS   94 (95)
T ss_dssp             CCCSSHHHHHHHHHHHHT--CCCCSSC
T ss_pred             cccCCHHHHHHHHHhcCC--CCCCCCC
Confidence            899999999999999999  9999996

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.4e-11  Score=76.65  Aligned_cols=45  Identities=16%  Similarity=0.247  Sum_probs=41.5

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|..|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2yso_A            2 SSGSSGSR--EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNS-----GPSSG   46 (46)
T ss_dssp             CCSCCSSC--CCCEECTTTCCEESSHHHHHHHHHHHSCCSCC-----CTTCC
T ss_pred             CcccccCC--CCCEEccccChhhCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889998  99999999999999999999999999999995     88876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.2e-11  Score=82.42  Aligned_cols=56  Identities=16%  Similarity=0.157  Sum_probs=51.4

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC-CCccccCChHHHHhHhhhcCCCCC
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN-SCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~-~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      ++|+|++|            ++.|. ...|..|+++ ++  ++||.|+ .||+.|.....|..|+++|...++
T Consensus         9 ~~~~C~~C------------~k~f~-~~~L~~H~~~-~~--~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            9 RTQPCTYC------------TKEFV-FDTIQSHQYQ-CP--RLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CEEECSSS------------CCEEE-HHHHHHHHHH-CS--SSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCeecccc------------CCccC-HHHHHHHHHH-cC--CcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            37888888            88999 9999999999 87  9999999 999999999999999999987765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=77.13  Aligned_cols=44  Identities=18%  Similarity=0.416  Sum_probs=40.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      |+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2ytm_A            3 SGSSGTG--EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPS-----GPSSG   46 (46)
T ss_dssp             SCCCCSS--CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCC-----CCCCC
T ss_pred             CCcCCCC--CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            7788988  99999999999999999999999999999995     88876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.10  E-value=5.3e-12  Score=85.38  Aligned_cols=52  Identities=12%  Similarity=0.231  Sum_probs=44.0

Q ss_pred             HHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCC
Q 038358          164 VQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCS  225 (312)
Q Consensus       164 L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~  225 (312)
                      |..|+++|++  ++||.|++||+.|.....|.   ++|++++||     .|..|++.|....
T Consensus         2 L~~h~~~H~~--~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~-----~C~~C~k~f~~~~   53 (62)
T 1vd4_A            2 IETDERDSTN--RASFKCPVCSSTFTDLEANQ---LFDPMTGTF-----RCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCCSSSCCS--SSEEECSSSCCEEEHHHHHH---HEETTTTEE-----BCSSSCCBCEECT
T ss_pred             hhhHHHHcCC--CCCccCCCCCchhccHHHhH---hhcCCCCCE-----ECCCCCCccccCc
Confidence            5678899998  99999999999999988886   889999994     7777777776644

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.4e-11  Score=76.63  Aligned_cols=44  Identities=18%  Similarity=0.284  Sum_probs=40.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      |+++|.+  +++|.|++|++.|.....|..|+++|++++||     +|++|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~~C   46 (46)
T 2em8_A            3 SGSSGSG--EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLS-----GPSSG   46 (46)
T ss_dssp             CCCCCCS--CCSEECSSSCCEESSHHHHHHHHHHHHCCCCC-----CSCCC
T ss_pred             CCCCCCC--CCCeECcccCchhCCHHHHHHHHHHHcCCCCC-----CCCCC
Confidence            6788988  99999999999999999999999999999995     88876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=75.96  Aligned_cols=45  Identities=22%  Similarity=0.332  Sum_probs=41.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhh-hcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRA-SHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|.+  +++|.|++|++.|.....|..|++ +|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~-----~C~~C   47 (47)
T 2epx_A            2 SSGSSGTG--KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPS-----GPSSG   47 (47)
T ss_dssp             CCCCCCCC--CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSS-----SCCCC
T ss_pred             ccccccCC--CCCEECCccCchhCChHHHHHHhHhhcCCCCCC-----CCCCC
Confidence            47889998  999999999999999999999999 99999995     88876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=9.2e-11  Score=76.76  Aligned_cols=46  Identities=20%  Similarity=0.251  Sum_probs=41.3

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhh-hcCCCCCcccccccCCCCCCCCcC
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRA-SHKHVKGCFAITRSSDGCEIDHDH  223 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~k~y~~~~~~C~~C~~~f~~  223 (312)
                      |.+  +++|.|++|++.|.....|..|++ +|.+++||     +|.+|++.|.+
T Consensus         7 ~~~--~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~-----~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSV--GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH-----KCQVWVSGPSS   53 (54)
T ss_dssp             CCS--SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC-----CSSSSCCSSCC
T ss_pred             CCC--CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCc-----cCCCCCCCCCC
Confidence            555  999999999999999999999997 99999995     88888888875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.9e-11  Score=75.18  Aligned_cols=45  Identities=22%  Similarity=0.391  Sum_probs=41.1

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~~   46 (46)
T 2em2_A            2 SSGSSGSG--EKPFKCKECGKAFRQNIHLASHLRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCCSCCC--CCSEECSSSCCEESSHHHHHHHHHHHCCCCSS-----CSSCC
T ss_pred             CCCCCCCC--CCCEECCcCCchhCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            47889988  99999999999999999999999999999995     77764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.3e-11  Score=85.52  Aligned_cols=71  Identities=17%  Similarity=0.189  Sum_probs=59.2

Q ss_pred             hhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhh
Q 038358          162 IQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMM  241 (312)
Q Consensus       162 ~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~  241 (312)
                      ..|..|+++|.+  ++++.|..|++.|. ...|..|+ .|.+++|                                   
T Consensus         3 ~~L~~H~~~~c~--~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~-----------------------------------   43 (75)
T 2d9k_A            3 SGSSGHEETECP--LRLAVCQHCDLELS-ILKLKEHE-DYCGART-----------------------------------   43 (75)
T ss_dssp             CCCSCCCCCCCC--CCCEECSSSCCEEC-HHHHHHHH-HHHHHCE-----------------------------------
T ss_pred             hHHHhhCcccCC--CcccCCcccChHhh-HHHHHHHH-hHcCCCc-----------------------------------
Confidence            457788888888  89999999999994 88899998 8888888                                   


Q ss_pred             cCceecCccccccCChhhHhhhhhhccCCCCCCc
Q 038358          242 VLGHKCSICLRVFSSGQALGGHKRCHWEKGDDPL  275 (312)
Q Consensus       242 H~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~  275 (312)
                         |.|+.|++.|. ...|..|+++|.++...++
T Consensus        44 ---~~C~~C~~~~~-~~~l~~H~~~c~~~~~~~~   73 (75)
T 2d9k_A           44 ---ELCGNCGRNVL-VKDLKTHPEVCGREGSGPS   73 (75)
T ss_dssp             ---EECSSSCCEEE-TTGGGTHHHHBTTBSSSCC
T ss_pred             ---eEcccCCCcCc-HHHHHHHHHHccCCcCCCC
Confidence               78888999877 5889999999988765554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.04  E-value=9.4e-11  Score=72.23  Aligned_cols=39  Identities=26%  Similarity=0.491  Sum_probs=36.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A            1 GSSGSSG--ENPYECSECGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             CCSSSSS--CCSEECSSSCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CCCCCCC--CCCccCCCcChhhCCHHHHHHHHHhcCCCCCC
Confidence            6778988  99999999999999999999999999999995

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.03  E-value=1.9e-10  Score=79.71  Aligned_cols=52  Identities=21%  Similarity=0.539  Sum_probs=48.3

Q ss_pred             cccccc--ccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhc
Q 038358          136 DHEVAA--CLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASH  201 (312)
Q Consensus       136 ~~~C~~--C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H  201 (312)
                      +|.|..  |            ++.|.....|..|+++|++  +++|+|.+  |++.|.....|..|+++|
T Consensus        17 ~~~C~~~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           17 SHICSHPGC------------GKTYFKSSHLKAHTRTHTG--EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CEECSSTTT------------CCEESSHHHHHHHHHHHSS--SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ceeCCCCCC------------ccccCCHHHHHHHHHhcCC--CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            688877  8            8899999999999999998  99999965  999999999999999886

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=8.5e-11  Score=74.05  Aligned_cols=43  Identities=26%  Similarity=0.451  Sum_probs=39.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2emj_A            2 SSGSSGTG--EKPFECAECGKSFSISSQLATHQRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCCCC--CCSEECSSSSCEESSHHHHHHHHHHHTTSCSS-----SSC
T ss_pred             CCCCCCCC--CCCEECCCCCcccCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.7e-11  Score=73.78  Aligned_cols=43  Identities=23%  Similarity=0.439  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|+|++|++.|.....|..|+++|++++||     .|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2ytp_A            2 SSGSSGTG--ERHYECSECGKAFARKSTLIMHQRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCSSCC--CCCEECSSSCCEESSHHHHHHHHTTTSCCCCC-----SSC
T ss_pred             CcccCcCC--CCCeECCcCCcccCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.7e-11  Score=73.75  Aligned_cols=43  Identities=23%  Similarity=0.484  Sum_probs=39.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2eq2_A            2 SSGSSGTG--GKPYQCNECGKAFSQTSKLARHQRVHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCSSSS--SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCC-----CCC
T ss_pred             CcccccCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.4e-11  Score=73.81  Aligned_cols=43  Identities=28%  Similarity=0.499  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     .|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2enf_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCCCC--CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCC-----CCS
T ss_pred             CCCcCCCC--CcCeECCCCCcccCCHHHHHHHHHhhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=73.30  Aligned_cols=44  Identities=20%  Similarity=0.376  Sum_probs=39.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      ++++|++  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         3 ~~~~h~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ep0_A            3 SGSSGTG--EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS-----GPSSG   46 (46)
T ss_dssp             CCCSSTT--CCSEECSSSCCEESSHHHHHHHHTTTSSSCCC-----SCCCC
T ss_pred             CCCCCCC--CCCeeCcccCcccCChHHHHHHHHHhCCCCCC-----CCCCC
Confidence            3567888  99999999999999999999999999999995     88876

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=73.40  Aligned_cols=43  Identities=26%  Similarity=0.424  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~-----~C~   44 (46)
T 2yts_A            2 SSGSSGTG--EKPYICNECGKSFIQKSHLNRHRRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCSCCCCS--CCSEECSSSCCEESSHHHHHHHGGGTSSCCSS-----CCC
T ss_pred             CCCCCCCC--CcCEECCCCChhhCChHHHHHHHHhcCCCCCc-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=73.42  Aligned_cols=43  Identities=23%  Similarity=0.445  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2yth_A            2 SSGSSGSG--EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCSCCCC--SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS-----SCC
T ss_pred             CcccCCCC--CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCC-----CCC
Confidence            57889988  99999999999999999999999999999995     775

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1e-10  Score=73.56  Aligned_cols=43  Identities=26%  Similarity=0.509  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2eow_A            2 SSGSSGTG--EKPYKCNECGKAFRARSSLAIHQATHSGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCSCC--CCCEECTTSCCEESSHHHHHHHHHHHCCCSCS-----CTT
T ss_pred             CccCCCCC--CCCeeccccCChhcCHHHHHHHHHHcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.2e-10  Score=73.40  Aligned_cols=43  Identities=28%  Similarity=0.471  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|+|.+|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2em4_A            2 SSGSSGTG--QRPYECIECGKAFKTKSSLICHRRSHTGEKPS-----GPS   44 (46)
T ss_dssp             CSCCCCCC--SSSEECSSSCCEESSHHHHHHHHHHHSSSSCC-----CCC
T ss_pred             CCccccCC--CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=73.58  Aligned_cols=43  Identities=23%  Similarity=0.484  Sum_probs=39.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-----~C~   44 (46)
T 2em3_A            2 SSGSSGTG--EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCCSS--CCSEECSSSCCEESSHHHHHHHHHHHCCCCCC-----CSC
T ss_pred             CCCCCCCC--CcCeECCCCCcccCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=73.29  Aligned_cols=43  Identities=26%  Similarity=0.490  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2ytf_A            2 SSGSSGTG--EKPFECSECQKAFNTKSNLIVHQRTHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCSSCC--CCSEECSSSCCEESSHHHHHHHHHTSCSSSSS-----CCC
T ss_pred             CCCCCCCC--CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889988  99999999999999999999999999999995     775

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=73.34  Aligned_cols=43  Identities=21%  Similarity=0.381  Sum_probs=39.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2ep1_A            2 SSGSSGTG--EKPYECSDCGKSFIKKSQLHVHQRIHTGENPS-----GPS   44 (46)
T ss_dssp             CCCCCCSS--CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCC-----SSS
T ss_pred             ccccCCCC--CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=73.53  Aligned_cols=43  Identities=28%  Similarity=0.528  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2yti_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLARHRGIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCCSC--CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCS-----STT
T ss_pred             CCCcCCCC--CcCeECCCCCcccCChhHHHHHhHhcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=73.19  Aligned_cols=43  Identities=21%  Similarity=0.433  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2yrj_A            2 SSGSSGTG--EKPYRCGECGKAFAQKANLTQHQRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCCCC--CCCEECSSSCCEESSHHHHHHHHTTTSSCCSS-----CSC
T ss_pred             CCccCCCC--CCCeECCCCCCccCCHHHHHHHHHHcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=73.31  Aligned_cols=43  Identities=21%  Similarity=0.448  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2em6_A            2 SSGSSGMG--EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCSCCCC--CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCC-----CTT
T ss_pred             CCccccCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-----CCC
Confidence            47889988  99999999999999999999999999999995     775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=72.83  Aligned_cols=43  Identities=23%  Similarity=0.461  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2emi_A            2 SSGSSGTG--ERHYECSECGKAFIQKSTLSMHQRIHRGEKPS-----GPS   44 (46)
T ss_dssp             CCCCSCSS--CCCEECSSSCCEESSHHHHHHHHGGGCSCCCC-----SCC
T ss_pred             CCCcccCC--CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=71.26  Aligned_cols=39  Identities=23%  Similarity=0.444  Sum_probs=36.8

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|.+  ++||.|++|++.|.....|..|+++|++++||
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            1 GSSGSSG--EKPYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             CCSSSCS--CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             CCcCcCC--CCCeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            6778988  99999999999999999999999999999995

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=73.28  Aligned_cols=43  Identities=26%  Similarity=0.510  Sum_probs=39.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2eq1_A            2 SSGSSGTG--EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCCCC--SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCS-----SCC
T ss_pred             CcccccCC--CCCeECCcCChhhCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889988  99999999999999999999999999999995     775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=72.11  Aligned_cols=40  Identities=28%  Similarity=0.548  Sum_probs=37.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A            2 SSGSSGTG--EKPYECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             CCSSCCSC--CCSEECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             CCccCCCC--CCCeECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            47889998  99999999999999999999999999999995

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=3e-10  Score=72.27  Aligned_cols=42  Identities=26%  Similarity=0.324  Sum_probs=38.2

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCC
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEI  219 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~  219 (312)
                      |.+  +++|.|.+|++.|.....|..|+++|++++||     +|.+|++
T Consensus         7 ~~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C~k   48 (48)
T 2epr_A            7 GRT--RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY-----SSGPSSG   48 (48)
T ss_dssp             CCC--CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC-----CSCCCCC
T ss_pred             CCC--CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCc-----cCCCCCC
Confidence            445  89999999999999999999999999999995     8888875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.1e-10  Score=71.90  Aligned_cols=40  Identities=20%  Similarity=0.343  Sum_probs=37.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         1 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            1 GSSGSSGG--EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCCS--CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CCccccCC--CCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            37888988  99999999999999999999999999999995

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=73.31  Aligned_cols=43  Identities=21%  Similarity=0.355  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~   44 (46)
T 2eoz_A            2 SSGSSGTG--EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLS-----GPS   44 (46)
T ss_dssp             CSCCCCSS--CCSEEETTTTEEESSHHHHHHHHHHHSSCCSS-----SCC
T ss_pred             CccccCCC--CCCeECcccChhhCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=72.35  Aligned_cols=40  Identities=28%  Similarity=0.414  Sum_probs=37.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2en7_A            2 SSGSSGTG--MKPYVCNECGKAFRSKSYLIIHTRTHTGESGP   41 (44)
T ss_dssp             CSCCCSSS--SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSS
T ss_pred             CCCcCCCC--CcCeECCCCCCccCCHHHHHHHhhhcCCCCCC
Confidence            47889998  99999999999999999999999999999995

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.4e-10  Score=72.22  Aligned_cols=40  Identities=25%  Similarity=0.534  Sum_probs=37.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +|+++|++  ++||.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            2 SSGSSGAG--ENPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CCSCCCSC--CCSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CCccccCC--CCCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            47889998  99999999999999999999999999999995

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=72.75  Aligned_cols=43  Identities=23%  Similarity=0.391  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-----~C~   44 (46)
T 2emg_A            2 SSGSSGTG--ENPFICSECGKVFTHKTNLIIHQKIHTGERPS-----GPS   44 (46)
T ss_dssp             CCCCCCCS--CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCS-----CSC
T ss_pred             CCCCCCCC--CCCEECCccCcccCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889988  99999999999999999999999999999995     775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=73.36  Aligned_cols=40  Identities=23%  Similarity=0.463  Sum_probs=37.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +|+++|++  +++|+|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yto_A            2 SSGSSGTG--EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHS   41 (46)
T ss_dssp             CCCCCCCS--CCCEECSSSCCEESSHHHHHHHHHHHTCCCBT
T ss_pred             CcccccCC--CCCEECcccCCccCCHhHHHHHHHHcCCCCCC
Confidence            57889998  99999999999999999999999999999995

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=72.66  Aligned_cols=40  Identities=23%  Similarity=0.473  Sum_probs=37.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoh_A            2 SSGSSGSG--KKPYECKECRKTFIQIGHLNQHKRVHTGERSS   41 (46)
T ss_dssp             CCCCSCCC--SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSC
T ss_pred             CCCCCcCC--CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            37888988  99999999999999999999999999999995

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.5e-10  Score=72.10  Aligned_cols=40  Identities=28%  Similarity=0.546  Sum_probs=37.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|+++++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eoj_A            2 SSGSSGTG--ENPYECCECGKVFSRKDQLVSHQKTHSGQSGP   41 (44)
T ss_dssp             CSCCSSSS--CCSCEETTTTEECSSHHHHHHHHTTSSSSCSC
T ss_pred             CCccccCC--CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            47889998  99999999999999999999999999999995

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=2.6e-10  Score=71.42  Aligned_cols=42  Identities=21%  Similarity=0.311  Sum_probs=38.7

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCE  218 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~  218 (312)
                      +|++  +++|+|++|++.|.....|..|+++|+++++|     .|+.||
T Consensus         4 ~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~-----~C~~cg   45 (45)
T 2epq_A            4 GSSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK-----SGPSSG   45 (45)
T ss_dssp             CCSS--CCSSEETTTTEECSCHHHHHHHHHHHSCCCCC-----CCCCCC
T ss_pred             CcCC--CCCCcCCCCCcccCCHHHHHHHHHHccCCCCC-----CCcCCC
Confidence            5777  99999999999999999999999999999995     888886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=72.68  Aligned_cols=42  Identities=19%  Similarity=0.401  Sum_probs=39.1

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      |+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         3 h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2eon_A            3 SGSSGTG--EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS-----GPS   44 (46)
T ss_dssp             CSSSCSS--CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC-----TTS
T ss_pred             CCCCCCC--CcccCCCCCCcccCcHHHHHHHHHhcCCCCCC-----CCC
Confidence            6788988  99999999999999999999999999999995     775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.3e-10  Score=73.08  Aligned_cols=43  Identities=21%  Similarity=0.404  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|.+|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~-----~C~   44 (46)
T 2eor_A            2 SSGSSGTG--EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CSSSSSSC--CCSEECTTTCCEESSHHHHHHHHHHHHSCCCS-----SST
T ss_pred             CCCcCcCC--CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=72.69  Aligned_cols=43  Identities=28%  Similarity=0.480  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~h~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2en9_A            2 SSGSSGAG--KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCSSCCS--SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCC-----SCC
T ss_pred             CCCCCCCC--CCCEECCccCcccCCHHHHHHHHHHcCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2e-10  Score=71.49  Aligned_cols=40  Identities=23%  Similarity=0.458  Sum_probs=37.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|.+  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2emb_A            2 SSGSSGHT--RKRYECSKCQATFNLRKHLIQHQKTHAAKSGP   41 (44)
T ss_dssp             CCCSCCCC--CSSEECTTTCCEESCHHHHHHHGGGGCCCCCT
T ss_pred             CcccccCC--CCCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            47889998  99999999999999999999999999999995

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=72.33  Aligned_cols=43  Identities=28%  Similarity=0.512  Sum_probs=39.8

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2eq3_A            2 SSGSSGTG--EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPS-----GPS   44 (46)
T ss_dssp             CCCCSSCC--CCSSEETTTTEECSSHHHHHHHHTTSCCCCCC-----CSC
T ss_pred             CcccCCCC--CCCeECCCCChhhCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     775

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=71.75  Aligned_cols=39  Identities=28%  Similarity=0.587  Sum_probs=37.0

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         3 h~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A            3 SGSSGTG--EKPYECDVCRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             CCCCCCC--SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CCCCcCC--CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            6788988  99999999999999999999999999999995

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.1e-10  Score=70.62  Aligned_cols=39  Identities=21%  Similarity=0.317  Sum_probs=36.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|.+  ++||.|++|++.|.....|..|+++|++++||
T Consensus         2 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            2 SSGSSGG--EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CCSCCSS--SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CCcccCC--CCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            6788988  99999999999999999999999999999995

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.5e-10  Score=71.83  Aligned_cols=43  Identities=28%  Similarity=0.476  Sum_probs=39.6

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC-CCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH-VKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~-~k~y~~~~~~C~  215 (312)
                      .|+++|.+  ++||.|++|++.|.....|..|+++|++ ++||     +|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~-----~C~   45 (46)
T 2eoy_A            2 SSGSSGQK--EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSG-----PSS   45 (46)
T ss_dssp             CCCCCCCC--SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTS-----SSC
T ss_pred             CCccccCC--CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCC-----CCC
Confidence            37889988  9999999999999999999999999999 9995     775

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=72.86  Aligned_cols=43  Identities=21%  Similarity=0.395  Sum_probs=39.5

Q ss_pred             HhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          168 NEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       168 ~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      +++|.+  +++|.|++|++.|.....|..|+++|++++||     +|+.|
T Consensus         4 ~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   46 (46)
T 2ytt_A            4 GSSGEG--EKPYQCSECGKSFSGSYRLTQHWITHTREKPS-----GPSSG   46 (46)
T ss_dssp             SSSCSC--CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCC-----SCCCC
T ss_pred             CCCCCC--CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC-----CCCCC
Confidence            567888  99999999999999999999999999999995     88876

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.95  E-value=2.6e-10  Score=70.15  Aligned_cols=39  Identities=21%  Similarity=0.369  Sum_probs=36.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|.+  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 H~~~H~~--~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            2 SSGSSGG--ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CCSCCCS--SCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CCccCCC--CCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            6778988  99999999999999999999999999999995

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.7e-10  Score=71.04  Aligned_cols=39  Identities=18%  Similarity=0.300  Sum_probs=37.0

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|++  ++||.|++|++.|.....|..|+++|++++||
T Consensus         2 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGG--EKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCCS--SCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCcccCC--CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            6788988  99999999999999999999999999999995

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=70.48  Aligned_cols=40  Identities=30%  Similarity=0.454  Sum_probs=37.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            2 SSGSSGSG--EKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCC--CCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCCcccCC--CcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            47889998  99999999999999999999999999999995

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.1e-10  Score=71.39  Aligned_cols=40  Identities=25%  Similarity=0.427  Sum_probs=37.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A            2 SSGSSGTD--SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CCCCCCCC--CCCEEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             CCCcCCCC--CCCeECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            47889998  99999999999999999999999999999995

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.6e-10  Score=72.70  Aligned_cols=40  Identities=23%  Similarity=0.370  Sum_probs=37.9

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .|+++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en3_A            2 SSGSSGTG--EKPFQCKECGMNFSWSCSLFKHLRSHERTDPS   41 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSCCEESSSHHHHHHHHHHHHSCCS
T ss_pred             ccccccCC--CCCeeCcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            57889998  99999999999999999999999999999995

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.8e-10  Score=72.57  Aligned_cols=43  Identities=30%  Similarity=0.567  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      .|+++|.+  +++|+|++|++.|.....|..|+++|+++++|     .|+
T Consensus         2 ~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2emz_A            2 SSGSSGSG--ERPFKCNECGKGFGRRSHLAGHLRLHSREKSS-----GPS   44 (46)
T ss_dssp             CCCSCSSC--CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCC-----CSC
T ss_pred             CCCcCCCC--CCCeECCCCCcccCCHHHHHHHHHHhCCCCCC-----CCC
Confidence            47889998  99999999999999999999999999999995     665

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.9e-10  Score=70.21  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=36.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |+++|.+  +++|.|++|++.|.....|..|+++|++++||
T Consensus         3 h~~~h~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (44)
T 2eou_A            3 SGSSGAA--KTTSECQECGKIFRHSSLLIEHQALHAGESGP   41 (44)
T ss_dssp             CSCSCSS--SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCC
T ss_pred             CCCCCCC--CcCeECCCCCcccCCHHHHHHHHHHHCCCCCC
Confidence            6788988  99999999999999999999999999999995

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.3e-10  Score=70.51  Aligned_cols=44  Identities=27%  Similarity=0.461  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCcceecC--CCccccCChHHHHhHhhhcCCCCCcccccccCCCC
Q 038358          167 TNEVNLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGC  217 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C  217 (312)
                      |.++|++  +++|+|.  .|++.|.....|..|+++|++++||     +|..|
T Consensus         3 ~~~~H~~--~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~~C   48 (48)
T 2ent_A            3 SGSSGTG--EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS-----GPSSG   48 (48)
T ss_dssp             CCCSSCC--CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC-----SSCCC
T ss_pred             CCCCcCC--CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC-----CCCCC
Confidence            4567888  9999998  8999999999999999999999995     88876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.90  E-value=4.7e-10  Score=70.55  Aligned_cols=43  Identities=21%  Similarity=0.156  Sum_probs=36.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKEC------------GKAFSQTTHLIQHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSS------------CCBCSCHHHHHHHHHHHSS--CCCSSCCCC
T ss_pred             CCCccCCCCceECCCC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45556555 7888888            8899999999999999998  999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.89  E-value=7.4e-10  Score=69.61  Aligned_cols=43  Identities=14%  Similarity=0.112  Sum_probs=36.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVEC------------GKGFSRRSALNVHHKLHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSS------------CCCBSSTTHHHHHHHHHSC--CSSCSCCCC
T ss_pred             CCCCCCCCCCcccCcc------------CcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            44556655 7888888            8899999999999999998  999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.1e-10  Score=70.39  Aligned_cols=43  Identities=14%  Similarity=0.115  Sum_probs=37.5

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTEC------------GKAFTRKSTLSMHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSS------------CCEESCHHHHHHHGGGTSC--SSCSCCCCC
T ss_pred             cccccCCCCCeECCCC------------CchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.9e-10  Score=70.04  Aligned_cols=43  Identities=14%  Similarity=0.094  Sum_probs=36.6

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNEC------------GKVFTQNSHLARHRGIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTT------------CCBCSSHHHHHHHGGGTSC--CCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCC------------CCeeCCHHHHHHHhhhcCC--CCCCCCCCC
Confidence            44556555 7888888            8899999999999999998  999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.88  E-value=5.7e-10  Score=70.11  Aligned_cols=43  Identities=16%  Similarity=0.150  Sum_probs=37.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNEC------------GKVFSRNSQLSQHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSS------------CCEESSHHHHHHHHTGGGC--CCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCC------------cchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999999  999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7e-10  Score=69.74  Aligned_cols=43  Identities=14%  Similarity=0.209  Sum_probs=37.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDC------------GKGYNRRLNLDMHQRVHMG--EKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSS------------CCBCSSHHHHHHHGGGGGS--CCCCCSCCC
T ss_pred             CCCCCCCCCCeeCccc------------CchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999999  999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.8e-10  Score=70.06  Aligned_cols=43  Identities=14%  Similarity=0.105  Sum_probs=37.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNEC------------GKVFTQNSHLTNHWRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSS------------CCEESSHHHHHHHHHHHSS--SSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcC------------CCccCCHHHHHHHHHHHCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.2e-10  Score=70.29  Aligned_cols=43  Identities=16%  Similarity=0.118  Sum_probs=37.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVC------------GKAFSHRQSLSVHQRIHSG--KKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSS------------CCEESSHHHHHHHHGGGSS--CCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCc------------CCccCCHHHHHHHHHHhcC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.87  E-value=6.5e-10  Score=69.84  Aligned_cols=43  Identities=16%  Similarity=0.122  Sum_probs=36.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCREC------------DMCFSQASSLRLHQNVHVG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSS------------CCCCSSHHHHHHHGGGGSS--SSCSCSSCC
T ss_pred             CcCccCCCcCeECCCC------------CcccCCHHHHHHHHHHcCC--CCCcCCCCC
Confidence            44555554 6777777            8899999999999999998  999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.9e-10  Score=69.67  Aligned_cols=43  Identities=16%  Similarity=0.091  Sum_probs=36.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  +++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDC------------GKSFTWKSRLRIHQKCHTG--ERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSS------------CCBCSSHHHHHHHHHHHSC--CSSCCSCCC
T ss_pred             CCCCCCCCCCccCCcc------------ChhhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            45556554 7888888            8899999999999999998  999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.8e-10  Score=69.71  Aligned_cols=43  Identities=16%  Similarity=0.061  Sum_probs=36.5

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|....+|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKEC------------GKSFSRAPCLLKHERLHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTT------------TBCCSCHHHHHHHHHHCCS--SSCCCCCCC
T ss_pred             CcccCCCCCCeECCCC------------CCccCchHHHHHHHHhcCC--CCCCCCCCC
Confidence            44555554 6788887            8899999999999999998  999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.1e-10  Score=70.35  Aligned_cols=43  Identities=12%  Similarity=-0.013  Sum_probs=37.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNEC------------GKAFSVYSSLTTHQVIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSS------------CCEESCHHHHHHHHHHHHC--CSCCSCCCC
T ss_pred             cccccCCCcCeECCCC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999999  999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=7.5e-10  Score=68.85  Aligned_cols=42  Identities=10%  Similarity=0.018  Sum_probs=36.4

Q ss_pred             hhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          129 ENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       129 ~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      +++|+++ +|+|++|            ++.|.....|..|+++|++  +++|.|++|
T Consensus         2 ~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCC------------EKAFSSKSYLLVHQQTHAE--EKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSS------------SCEESSHHHHHHHHHHHTS--SCSCSCCCC
T ss_pred             CCCcCCCcCccCCCC------------CcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            4456555 7888888            8899999999999999998  999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1e-09  Score=71.68  Aligned_cols=41  Identities=12%  Similarity=0.134  Sum_probs=38.1

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHh-hhcCCCCcceecCCCccccCC
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE-VNLGGVSCRFECNSCKKVFGS  190 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~-~H~~~~~k~~~C~~C~~~F~~  190 (312)
                      +|+|++|            ++.|.....|..|++ +|.+  +++|+|++|++.|.+
T Consensus        12 ~~~C~~C------------~k~f~~~~~L~~H~~~~H~~--~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           12 PYICQSC------------GKGFSRPDHLNGHIKQVHTS--ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CEECSSS------------CCEESSHHHHHHHHHHTSCC--CCCCCSSSSCCSSCC
T ss_pred             CeECCCC------------CcccCCHHHHHHHHHHhcCC--CCCccCCCCCCCCCC
Confidence            7889888            889999999999997 9998  999999999999976

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6e-10  Score=70.01  Aligned_cols=43  Identities=14%  Similarity=0.021  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|.|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAEC------------GKAFTIRSNLIKHQKIHTK--QKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSS------------CCEESSHHHHHHHHHHTSC--CCCSSCSCC
T ss_pred             cccCCCCCcCeECCCC------------ChhhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.1e-10  Score=69.93  Aligned_cols=43  Identities=21%  Similarity=0.202  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNEC------------GKSFIQSAHLIQHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSS------------CCEESSHHHHHHHHHHHSC--CCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCC------------ChhhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5e-10  Score=70.44  Aligned_cols=43  Identities=9%  Similarity=0.006  Sum_probs=37.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|.|++|            ++.|.....|..|+++|++  +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNEC------------GKNFGRHSHLIEHLKRHFR--EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSS------------CCEESSHHHHHHHHHHHHS--TTSSCCSCC
T ss_pred             CCCCCCCCCCEEcccc------------CcccCCHHHHHHHHHHHcC--CCCCCCCCC
Confidence            55566655 7888888            8899999999999999999  999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.4e-10  Score=69.82  Aligned_cols=43  Identities=16%  Similarity=0.135  Sum_probs=37.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNEC------------GKVFTQNSHLANHQRIHTG--VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTT------------TEECSSHHHHHHHHGGGSC--CCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCc------------ChhhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999998  999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.1e-10  Score=69.39  Aligned_cols=43  Identities=16%  Similarity=0.177  Sum_probs=36.6

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDC------------GKAFSDHIGLNQHRRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTT------------CCCBSSHHHHHHHHTTTTT--CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCC------------CceeCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            44556554 6888887            8899999999999999998  999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.86  E-value=5.1e-10  Score=70.31  Aligned_cols=43  Identities=14%  Similarity=0.003  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQC------------AKTFSLKSQLIVHQRSHTG--VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSS------------SCEESSHHHHHHHGGGSSS--CCCSCCTTC
T ss_pred             cccCCCCCCceECCCC------------CchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999998  999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.1e-10  Score=69.10  Aligned_cols=42  Identities=29%  Similarity=0.453  Sum_probs=37.8

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +.++|++  +++|+|++|++.|.....|..|+++|++++||     +|+
T Consensus         3 ~~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (45)
T 2epu_A            3 SGSSGTG--QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSG-----PSS   44 (45)
T ss_dssp             CCCCCCS--CCSEEETTTTEEESSHHHHHHHHTTTSSCCCC-----CSC
T ss_pred             CCCCCCC--CcCccCCCCCCccCChHHHHHHHHHhCCCCCC-----CCC
Confidence            3467887  99999999999999999999999999999995     775

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7e-10  Score=69.70  Aligned_cols=43  Identities=19%  Similarity=0.126  Sum_probs=37.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHEC------------GKAFSRKYQLISHQRTHAG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSS------------CCEESSHHHHHHHHHHHTT--SCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCC------------CcccCcHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8e-10  Score=69.41  Aligned_cols=43  Identities=16%  Similarity=0.049  Sum_probs=36.5

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDIC------------GKSFCGRSRLNRHSMVHTA--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSS------------CCCCSSHHHHHHHHHHTTC--CCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            44555555 7888888            8899999999999999998  999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.4e-10  Score=69.55  Aligned_cols=43  Identities=23%  Similarity=0.176  Sum_probs=36.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECREC------------GKSFSFNSQLIVHQRIHTG--ENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTT------------CCBCSSHHHHHHHHTTTTT--SCCSCCCCC
T ss_pred             CccccCCCCCeeCCCC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            44555554 6778777            8899999999999999998  999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.5e-10  Score=69.86  Aligned_cols=43  Identities=14%  Similarity=0.089  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVC------------GKAFTDRSNLIKHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTT------------CCEESSHHHHHHHHHHHHC--SSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCC------------CchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999999  999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7e-10  Score=69.68  Aligned_cols=43  Identities=12%  Similarity=0.155  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSEC------------GKAFHRHTHLNEHRRIHTG--YRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSS------------CCEESSHHHHHHHHHHHTC--CCSSCSSCC
T ss_pred             CccccCCCcCeECCCC------------CCeeCChHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=8.5e-10  Score=69.37  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=37.7

Q ss_pred             HhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          168 NEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       168 ~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      +++|++  +++|+|++|++.|.....|..|+++|++++||     +|+
T Consensus         4 ~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-----~C~   44 (46)
T 2eom_A            4 GSSGHG--ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS-----GPS   44 (46)
T ss_dssp             CCCCCC--CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS-----SCC
T ss_pred             CCCCCC--CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC-----CCC
Confidence            567888  99999999999999999999999999999995     775

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.2e-10  Score=69.93  Aligned_cols=43  Identities=21%  Similarity=0.164  Sum_probs=37.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|.|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSIC------------GKSFTKKSQLHVHQQIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSS------------CCEESSHHHHHHHHHTTSS--CCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCC------------CcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999999  999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.9e-10  Score=69.23  Aligned_cols=43  Identities=12%  Similarity=-0.023  Sum_probs=36.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSEC------------GKAFSSKSYLIIHMRTHSG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSS------------CCBCSCHHHHHHHHTTTCC--SCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCcc------------ChhhCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            44556655 7888888            8899999999999999998  999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.9e-10  Score=69.40  Aligned_cols=43  Identities=16%  Similarity=0.133  Sum_probs=36.5

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNEC------------GKAFSQTSKLARHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTT------------CCCCSSHHHHHHHHTTTTT--CSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCC------------CCccCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            44555555 6778777            8899999999999999998  999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.3e-10  Score=69.42  Aligned_cols=43  Identities=14%  Similarity=0.100  Sum_probs=37.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMEC------------GKAFGDNSSCTQHQRLHTG--QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTT------------TBCCSSHHHHHHHHHHHHS--CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            44556655 7888888            8899999999999999999  999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=6.7e-10  Score=69.82  Aligned_cols=43  Identities=12%  Similarity=0.162  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHEC------------GRGFTLKSHLNQHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSS------------CCEESSHHHHHHHHTTTSC--SCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcC------------CCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999998  999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.5e-10  Score=69.86  Aligned_cols=43  Identities=14%  Similarity=0.098  Sum_probs=37.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHEC------------GKVFRRNSHLARHQLIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTT------------CCEESSHHHHHHHHTTTCC--CCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            44556555 7888888            8899999999999999998  999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.8e-10  Score=69.75  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=37.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGEC------------GKSYNQRVHLTQHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTT------------CCEESSSHHHHTTGGGGSS--CCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCC------------CcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999998  999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.2e-10  Score=69.38  Aligned_cols=43  Identities=14%  Similarity=0.105  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNEC------------GKVFRHNSYLSRHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSS------------CCEESSHHHHHHHHTTTCC--CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCC------------CchhCChHHHHHHHhhcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.9e-10  Score=69.72  Aligned_cols=43  Identities=14%  Similarity=0.066  Sum_probs=37.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 h~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNEC------------GKTFSQKSILSAHQRTHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTT------------TEEESSHHHHHHHHHHHSS--CCCSSSCCC
T ss_pred             CCCccCCCcCeECCCC------------CcccCchHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566665 7889888            8899999999999999998  999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=7.5e-10  Score=69.56  Aligned_cols=43  Identities=16%  Similarity=0.044  Sum_probs=37.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEEC------------GKGFICRRDLYTHHMVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSS------------CCEESCHHHHHHHGGGGTT--CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCc------------cchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9e-10  Score=69.13  Aligned_cols=43  Identities=12%  Similarity=0.053  Sum_probs=37.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYC------------GKAFGLSAELVRHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSS------------CCEESSHHHHHHHHGGGCC--CSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCC------------ChhhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            45556555 7888888            8899999999999999998  999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.9e-10  Score=69.72  Aligned_cols=43  Identities=19%  Similarity=0.125  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNEC------------GKVFTQNSHLARHRRVHTG--GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSS------------CCEESSSHHHHHHTHHHHS--CCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcC------------CchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999999  999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.85  E-value=9.5e-10  Score=69.12  Aligned_cols=43  Identities=9%  Similarity=0.007  Sum_probs=37.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQC------------EKSFSGKLRLLVHQRMHTR--EKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSS------------SCEESSHHHHHHHHGGGCC--SSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCC------------CcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            44566655 7888888            8899999999999999998  999999988

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.84  E-value=5.7e-10  Score=72.85  Aligned_cols=26  Identities=23%  Similarity=0.416  Sum_probs=24.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++||+.|...+.|..|+++|+++
T Consensus        25 ~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A           25 ATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhccC
Confidence            89999999999999999999999875

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.7e-10  Score=69.50  Aligned_cols=43  Identities=19%  Similarity=0.173  Sum_probs=37.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEEC------------GKRFTQNSQLHSHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTT------------TEEESSHHHHHHHGGGGSC--CCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCC------------CcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9e-10  Score=69.14  Aligned_cols=43  Identities=14%  Similarity=0.024  Sum_probs=37.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTEC------------GKAFCWKSQLIMHQRTHVD--DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSS------------CCEESSSHHHHHHHHHCCS--CCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCC------------CCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45556655 7888888            8899999999999999998  999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=7.8e-10  Score=69.42  Aligned_cols=43  Identities=16%  Similarity=0.103  Sum_probs=37.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDEC------------GKNFCYISALRIHQRVHMG--EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTT------------CCEESSHHHHHHHHTTTCC--SCSSCCSCC
T ss_pred             ccccCCCCCCeECCCc------------CcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.84  E-value=9.3e-10  Score=69.06  Aligned_cols=43  Identities=19%  Similarity=0.081  Sum_probs=37.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKEC------------GKSFRWASCLLKHQRVHSG--EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSS------------CCEESSHHHHHHHGGGGTS--CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCcc------------ccccCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=1.9e-09  Score=66.76  Aligned_cols=40  Identities=25%  Similarity=0.367  Sum_probs=36.6

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSD  215 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~  215 (312)
                      ++|++  +++|.|++|++.|.....|..|+++|++++||     +|+
T Consensus         3 ~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-----~C~   42 (43)
T 2yrm_A            3 SGSSG--NGAFFCNECDCRFSEEASLKRHTLQTHSDKSG-----PSS   42 (43)
T ss_dssp             SCCSS--SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCS-----SSC
T ss_pred             cCcCC--CCCEECCCCCCeeCChHHHHHHHHhhCCCCCc-----cCC
Confidence            46777  99999999999999999999999999999995     775

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.2e-09  Score=68.54  Aligned_cols=43  Identities=16%  Similarity=0.196  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|.+|
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCREC------------GEIFFQYVSLIEHQVLHMG--QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTT------------CCEESSHHHHHHHHHHHSC--CSCCCTTCC
T ss_pred             cccccCCCCCEEcccc------------ChhhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.2e-09  Score=68.54  Aligned_cols=43  Identities=14%  Similarity=0.067  Sum_probs=37.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEEC------------GKGFYTNSQCYSHQRSHSG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSS------------CCEESSHHHHHHHHHHSCC--SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCC------------CCcCCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=68.56  Aligned_cols=43  Identities=12%  Similarity=0.109  Sum_probs=37.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVEC------------GKGYKRRLDLDFHQRVHTG--EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSS------------CCEESSHHHHHHHHHHHHC--CCCCCSCCC
T ss_pred             CCCCCCCCCCeECccc------------CchhCCHHHHHHHHHHHcC--CCCCCCCCC
Confidence            44556655 7888888            8899999999999999999  999999988

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.2e-09  Score=65.54  Aligned_cols=37  Identities=24%  Similarity=0.384  Sum_probs=34.5

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      ++|++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         3 ~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            3 SGSSG--QRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             SSCCC--CCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CccCC--CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            46777  99999999999999999999999999999995

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.1e-10  Score=69.39  Aligned_cols=43  Identities=14%  Similarity=0.113  Sum_probs=37.6

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKC------------GKGYNSKFNLDMHQKVHTG--ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTT------------TEEESCHHHHHHHHTTSCS--CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCC------------CCccCCHHHHHHHHHhhCC--CCCCCCCCC
Confidence            55566665 7899888            8899999999999999998  999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=68.70  Aligned_cols=43  Identities=16%  Similarity=0.117  Sum_probs=37.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAEC------------GKAFTDRSNLFTHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSS------------CCEESSHHHHHHHHTTTTT--SCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCC------------CchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=68.11  Aligned_cols=43  Identities=16%  Similarity=0.045  Sum_probs=36.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHh-hhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE-VNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~-~H~~~~~k~~~C~~C  184 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|++ +|++  ++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~~H~~--~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIEC------------GKAFIQNTSLIRHWRYYHTG--EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSS------------CCCBSSHHHHHHHHTTTTTT--SCSSSCCCC
T ss_pred             cccccCCCCCEECCcc------------CchhCChHHHHHHhHhhcCC--CCCCCCCCC
Confidence            44556655 7888888            889999999999999 9998  999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=67.76  Aligned_cols=43  Identities=16%  Similarity=0.183  Sum_probs=37.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKEC------------GKAFRQNIHLASHLRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSS------------CCEESSHHHHHHHHHHHCC--CCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcC------------CchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45566655 7888888            8899999999999999998  999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=5.1e-10  Score=81.10  Aligned_cols=45  Identities=20%  Similarity=0.305  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCE  218 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~  218 (312)
                      |.++|++  +++|.|++|++.|.....|..|+++|++++||     +|..|.
T Consensus        16 ~~~~H~~--~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~-----~C~~~~   60 (88)
T 1x6f_A           16 GNGPRLQ--NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQK-----RAKRQE   60 (88)
T ss_dssp             CCCSCCC--CSCEECSSSCCEESSHHHHHHHHHHHHHHHHH-----HCCCCS
T ss_pred             cccccCC--CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCc-----ccchhh
Confidence            4567888  99999999999999999999999999999984     665443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=3.2e-09  Score=67.37  Aligned_cols=38  Identities=8%  Similarity=0.176  Sum_probs=35.1

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCcc
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKK  186 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~  186 (312)
                      ++|+|++|            ++.|.....|..|+++|++  ++||.|++|++
T Consensus        11 k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEIC------------GKIFRDVYHLNRHKLSHSG--EKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTT------------TEEESSHHHHHHHGGGSCS--CCCCCSCCCCC
T ss_pred             cCeeCCCC------------CcccCCHHHHHHHHHhcCC--CCCccCCCCCC
Confidence            37899988            8899999999999999998  99999999986

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3e-09  Score=63.30  Aligned_cols=36  Identities=14%  Similarity=0.356  Sum_probs=33.4

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      ++|++  +++|.|++|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSS--GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCC--CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCC--CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            56777  9999999999999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.73  E-value=4.3e-09  Score=62.61  Aligned_cols=36  Identities=28%  Similarity=0.526  Sum_probs=33.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |+++|++  ++||+|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTG--IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCC--SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCC--CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            7788998  99999999999999999999999999875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=5.1e-09  Score=65.34  Aligned_cols=41  Identities=15%  Similarity=0.029  Sum_probs=36.2

Q ss_pred             hccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCc
Q 038358          131 VMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCK  185 (312)
Q Consensus       131 ~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~  185 (312)
                      .|+++ +|+|++|            ++.|.....|..|+++|++  +++|.|++||
T Consensus         4 ~h~~~k~~~C~~C------------~k~f~~~~~l~~H~~~H~~--~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVC------------GLRFKRKDRMSYHVRSHDG--SVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTT------------TEECSCHHHHHHHHHHHSC--CCCCCCCCCC
T ss_pred             CcCCCCCCcCCCC------------CcccCCHHHHHHHHHHccC--CCCCCCcCCC
Confidence            35554 7889888            8899999999999999998  9999999997

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.9e-09  Score=66.19  Aligned_cols=41  Identities=12%  Similarity=0.013  Sum_probs=35.5

Q ss_pred             hhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          130 NVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       130 ~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      ++|.++ +|.|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSEC------------GKSFSGSYRLTQHWITHTR--EKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSS------------CCCCSSHHHHHHHHTHHHH--CCCCSCCCC
T ss_pred             CCCCCCCCeeCCCC------------CcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            345554 7888888            8899999999999999999  999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4e-09  Score=66.13  Aligned_cols=41  Identities=20%  Similarity=0.178  Sum_probs=36.0

Q ss_pred             hhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          130 NVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       130 ~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      ++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVC------------HKSFRYGSSLTVHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSS------------CCEESSHHHHHHHHTTTSS--SCCCSCCCC
T ss_pred             CCCCCCCCeeCccc------------CcccCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            455555 7888888            8899999999999999998  999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.71  E-value=5.9e-10  Score=75.12  Aligned_cols=53  Identities=15%  Similarity=0.211  Sum_probs=43.0

Q ss_pred             HHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHh
Q 038358          127 SVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGG  196 (312)
Q Consensus       127 ~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~  196 (312)
                      .|+++|+++ +|+|++|            ++.|.....|.   ++|++  ++||.|++||+.|....++..
T Consensus         4 ~h~~~H~~~k~~~C~~C------------~k~F~~~~~l~---~~H~~--~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVC------------SSTFTDLEANQ---LFDPM--TGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCSSSCCSSSEEECSSS------------CCEEEHHHHHH---HEETT--TTEEBCSSSCCBCEECTTCSC
T ss_pred             hHHHHcCCCCCccCCCC------------CchhccHHHhH---hhcCC--CCCEECCCCCCccccCccccc
Confidence            456667665 8899888            77888877776   88998  999999999999988776543

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4.6e-09  Score=65.90  Aligned_cols=42  Identities=14%  Similarity=0.059  Sum_probs=36.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIEC------------GKAFKTKSSLICHRRSHTG--EKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSS------------CCEESSHHHHHHHHHHHSS--SSCCCCCC
T ss_pred             CccccCCCcCcCCCCC------------CCccCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            45566655 7888888            8899999999999999998  99999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.70  E-value=4.6e-09  Score=65.86  Aligned_cols=42  Identities=24%  Similarity=0.205  Sum_probs=35.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAEC------------GKSFSISSQLATHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSS------------SCEESSHHHHHHHHHHHTT--SCSSSSCC
T ss_pred             CCCCCCCCCCEECCCC------------CcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            45566655 7888888            8899999999999999998  99999975

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5.4e-09  Score=65.52  Aligned_cols=42  Identities=17%  Similarity=0.124  Sum_probs=35.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|.|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNEC------------GKAFSQTSKLARHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSS------------CCCCSSHHHHHHHGGGGCC--CCCCCCCC
T ss_pred             cccccCCCCCeECCCC------------CcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            44556555 6778777            8899999999999999998  99999975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5.5e-09  Score=65.42  Aligned_cols=42  Identities=21%  Similarity=0.170  Sum_probs=34.9

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDC------------GKSFIKKSQLHVHQRIHTG--ENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSS------------CCCCSSHHHHHHHHGGGSS--SCCCSSSC
T ss_pred             cccCCCCCCCcCCCCC------------CchhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            44555554 6777777            8899999999999999998  99999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=5.1e-09  Score=65.64  Aligned_cols=42  Identities=14%  Similarity=0.092  Sum_probs=35.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSEC------------GKVFTHKTNLIIHQKIHTG--ERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTT------------CCBCSSHHHHHHHHTTTSC--CCCSCSCC
T ss_pred             CCCCCCCCCCEECCcc------------CcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            45556555 6888888            8899999999999999998  99999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=5e-09  Score=65.64  Aligned_cols=42  Identities=17%  Similarity=0.120  Sum_probs=35.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNEC------------GKVFTQNSHLVRHRGIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSS------------CCBCSSHHHHHHHHTTTTT--SSCCCCSC
T ss_pred             CCcCCCCCcCeECCCC------------CcccCCHHHHHHHHHhhCC--CCCCCCCC
Confidence            44556554 7888888            8899999999999999998  99999975

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.2e-09  Score=65.26  Aligned_cols=42  Identities=12%  Similarity=0.102  Sum_probs=35.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNEC------------KKTFTQSSSLTVHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTT------------CCBCSSHHHHHHHHHHHTS--SCCCSCCC
T ss_pred             CCCCCCCCCCEECCcc------------CcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            44556655 7888888            8899999999999999998  99999975

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=5.4e-09  Score=65.50  Aligned_cols=42  Identities=19%  Similarity=0.187  Sum_probs=35.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVC------------SKAFTQKAHLAQHQKTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSS------------CCEESSHHHHHHHHHHHCC--CCCCCSCC
T ss_pred             CCCCCCCCcCeECCCC------------CcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            45556655 7888888            8899999999999999998  99999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.6e-09  Score=65.43  Aligned_cols=42  Identities=19%  Similarity=0.137  Sum_probs=36.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  +++|.|++
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSEC------------GKAFIQKSTLSMHQRIHRG--EKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSS------------CCEESSHHHHHHHHGGGCS--CCCCSCCC
T ss_pred             CCcccCCCCCCCCCCC------------CcccCCHHHHHHHHhHhCC--CCCCCCCC
Confidence            55666655 7888888            8899999999999999998  99999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.8e-09  Score=65.81  Aligned_cols=42  Identities=17%  Similarity=0.131  Sum_probs=35.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSEC------------GKAFARKSTLIMHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSS------------CCEESSHHHHHHHHTTTSC--CCCCSSCC
T ss_pred             cccCcCCCCCeECCcC------------CcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            45566655 7888888            8899999999999999998  99999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.3e-09  Score=65.22  Aligned_cols=42  Identities=17%  Similarity=0.184  Sum_probs=35.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|.|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEEC------------GKRFTQNSHLHSHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSS------------CCCBSSHHHHHHHGGGGTT--CCCSSCCC
T ss_pred             cccCCCCCcCCCCCCC------------CcccCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            45556555 7888888            8899999999999999998  99999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.8e-09  Score=65.35  Aligned_cols=42  Identities=17%  Similarity=0.131  Sum_probs=34.9

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNEC------------GKVFTQNSHLARHRGIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSS------------CCCCSSHHHHHHHHTTTSC--SCCSSTTC
T ss_pred             CCcCCCCCcCeECCCC------------CcccCChhHHHHHhHhcCC--CCCCCCCC
Confidence            44555554 6788887            8899999999999999998  99999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.4e-09  Score=65.21  Aligned_cols=42  Identities=19%  Similarity=0.139  Sum_probs=35.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVC------------GKEFSQSSHLQTHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSS------------CCBCSSHHHHHHHHTTTSS--SCCCCTTC
T ss_pred             CccccCCCCCeECCCC------------CcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            44555554 6788887            8899999999999999998  99999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.67  E-value=7.4e-09  Score=63.47  Aligned_cols=40  Identities=15%  Similarity=0.180  Sum_probs=34.1

Q ss_pred             hhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          129 ENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       129 ~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      +++|+++ +|+|++|            ++.|.....|..|+++|++  +++|.|+
T Consensus         2 ~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSEC------------GKAFNRKDQLISHQRTHAG--ESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSS------------CCEESSHHHHHHHHGGGCC--CCSCCCC
T ss_pred             CCCCCCCCCccCCCc------------ChhhCCHHHHHHHHHhcCC--CCCCCCC
Confidence            4456555 7888888            8899999999999999998  9999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.5e-09  Score=65.40  Aligned_cols=42  Identities=19%  Similarity=0.189  Sum_probs=35.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEEC------------GKAFIHDSQLQEHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTT------------CCEESSHHHHHHHHHHHHS--CCCSSSTT
T ss_pred             CCcCcCCCcCccCCCC------------CCCcCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            45566655 7888888            8899999999999999999  99999975

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.7e-09  Score=65.36  Aligned_cols=42  Identities=19%  Similarity=0.115  Sum_probs=35.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNEC------------GKSFIQKSHLNRHRRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSS------------CCEESSHHHHHHHGGGTSS--CCSSCCCC
T ss_pred             CCCCCCCCcCEECCCC------------ChhhCChHHHHHHHHhcCC--CCCcCCCC
Confidence            45566655 7888888            8899999999999999998  99999975

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.67  E-value=1.3e-08  Score=61.26  Aligned_cols=35  Identities=34%  Similarity=0.625  Sum_probs=32.3

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |++  +++|.|++|++.|.....|..|+++|++++||
T Consensus         1 h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWP--PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CC--SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCC--CCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            455  89999999999999999999999999999996

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.67  E-value=1.2e-08  Score=59.69  Aligned_cols=34  Identities=26%  Similarity=0.350  Sum_probs=31.7

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      |++  +++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 h~~--~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSG--SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCC--CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCC--CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            666  9999999999999999999999999999875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.3e-09  Score=65.20  Aligned_cols=42  Identities=14%  Similarity=0.116  Sum_probs=34.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNEC------------GKAFRAHSNLTTHQVIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTT------------TCCCSSHHHHHHHHTTTCC--SCCSSCCC
T ss_pred             cccccCCCCCeECCcC------------ChhhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            44555544 6777777            8899999999999999998  99999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.3e-09  Score=64.84  Aligned_cols=42  Identities=14%  Similarity=0.068  Sum_probs=35.5

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNEC------------GKAFRARSSLAIHQATHSG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTS------------CCEESSHHHHHHHHHHHCC--CSCSCTTC
T ss_pred             ccCCCCCCCCeecccc------------CChhcCHHHHHHHHHHcCC--CCCCCCCC
Confidence            44556555 7888888            8899999999999999998  99999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6e-09  Score=65.23  Aligned_cols=42  Identities=17%  Similarity=0.162  Sum_probs=35.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGEC------------GKAFAQKANLTQHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSS------------CCEESSHHHHHHHHTTTSS--CCSSCSCC
T ss_pred             CccCCCCCCCeECCCC------------CCccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            45556655 7888888            8899999999999999998  99999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.2e-09  Score=64.86  Aligned_cols=42  Identities=17%  Similarity=0.125  Sum_probs=35.6

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSEC------------QKAFNTKSNLIVHQRTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSS------------CCEESSHHHHHHHHHTSCS--SSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCC------------CcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            44556555 7888888            8899999999999999998  99999975

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.66  E-value=1.5e-08  Score=59.39  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=32.1

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      +|++  +++|.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSG--KRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSC--CSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCC--CcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            3666  9999999999999999999999999999875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.5e-09  Score=64.90  Aligned_cols=42  Identities=17%  Similarity=0.143  Sum_probs=35.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVC------------GKAFRVSSHLVQHHSVHSG--ERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSS------------CCBCSSHHHHHHHTTTTTS--CCSCTTSC
T ss_pred             CCCCCCCCcccCCCCC------------CcccCcHHHHHHHHHhcCC--CCCCCCCC
Confidence            44556655 7888888            8899999999999999998  99999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-08  Score=62.52  Aligned_cols=40  Identities=10%  Similarity=0.123  Sum_probs=33.2

Q ss_pred             hhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          129 ENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       129 ~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      +++|.++ +|+|++|            ++.|.....|..|+++|++  +++|+|.
T Consensus         2 ~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAEC------------KETFSDNNRLVQHQKMHTV--KSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTT------------CCBCSSHHHHHHHHHHTSC--CSSCCCC
T ss_pred             CcCcCCCCCeECCCC------------CCccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            3445554 6778777            8899999999999999998  9999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.1e-08  Score=64.16  Aligned_cols=42  Identities=17%  Similarity=0.116  Sum_probs=34.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  +++|+|+.
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKEC------------RKTFIQIGHLNQHKRVHTG--ERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSS------------CCCCSSHHHHHHHHHHCSS--CCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCc------------CchhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            44555554 6778777            8899999999999999998  99999963

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6.8e-09  Score=65.06  Aligned_cols=42  Identities=10%  Similarity=0.037  Sum_probs=35.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNEC------------GKGFGRRSHLAGHLRLHSR--EKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSS------------CCCCSSHHHHHHHHHHHHH--TTCCCSCC
T ss_pred             CCcCCCCCCCeECCCC------------CcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            44556555 6788887            8899999999999999998  99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.1e-08  Score=64.08  Aligned_cols=42  Identities=19%  Similarity=0.169  Sum_probs=34.9

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|+.
T Consensus         3 h~~~h~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVC------------RKAFSHHASLTQHQRVHSG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTT------------CCBCSSSHHHHHHGGGSCC--SCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCc------------CchhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            34455555 7888888            8899999999999999998  99999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8.3e-09  Score=64.67  Aligned_cols=42  Identities=14%  Similarity=0.052  Sum_probs=35.9

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVC------------GKAFVLSAHLNQHLRVHTQ--ETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTT------------TEEESSHHHHHHHHHHHSS--CCSSSCCC
T ss_pred             ccccCCCCCCeECccc------------ChhhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            45566655 7888888            8899999999999999998  99999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.2e-09  Score=64.97  Aligned_cols=42  Identities=14%  Similarity=0.108  Sum_probs=35.6

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDC------------GKAFTRKSGLHIHQQSHTG--ERHSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCEECSSS------------CCEESSHHHHHHHHHHHTC--CCBTTTBC
T ss_pred             cccccCCCCCEECccc------------CCccCCHhHHHHHHHHcCC--CCCCCCCC
Confidence            45566655 7888888            8899999999999999998  99999963

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6.6e-09  Score=64.37  Aligned_cols=41  Identities=17%  Similarity=0.146  Sum_probs=35.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  +++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCEC------------GKVFSRKDQLVSHQKTHSG--QSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTT------------TEECSSHHHHHHHHTTSSS--SCSCCCC
T ss_pred             CccccCCCcCeeCCCC------------CCccCCHHHHHHHHHHcCC--CCCCCCC
Confidence            55566655 7888888            8899999999999999998  9999985

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.63  E-value=1.4e-08  Score=60.26  Aligned_cols=26  Identities=31%  Similarity=0.514  Sum_probs=21.9

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.+...|..|+++|+++
T Consensus        12 ~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A           12 FQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             BCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             ccCCCCCcccCcHHHHHHHHHHhccC
Confidence            78888888888888888888888763

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.2e-08  Score=63.13  Aligned_cols=41  Identities=10%  Similarity=0.007  Sum_probs=34.1

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|+++ +|.|++|            ++.|.....|..|+++|++  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNEC------------GKAFRSKSYLIIHTRTHTG--ESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTT------------CCCCSSHHHHHHHHTTTCC--SSSSCCC
T ss_pred             CCcCCCCCcCeECCCC------------CCccCCHHHHHHHhhhcCC--CCCCCCC
Confidence            44555554 6778777            8899999999999999998  9999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.1e-08  Score=63.34  Aligned_cols=41  Identities=10%  Similarity=0.064  Sum_probs=34.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKC------------DRVFTQRNYLVQHERTHAR--KSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSS------------SCEESSSHHHHHHHHHCCC--CCSSCCC
T ss_pred             CccccCCCCCeECCCC------------CchhCCHHHHHHHhHhcCC--CCCCCCC
Confidence            45566655 7888888            8899999999999999998  9999984

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.3e-08  Score=62.97  Aligned_cols=41  Identities=15%  Similarity=0.134  Sum_probs=34.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNEC------------QKAFNTKSNLMVHQRTHTG--ESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTT------------CCEESCHHHHHHHHHHTTT--SSCSCCC
T ss_pred             CccCCCCCCCeECCCC------------CcccCCHhHHHHHHHHhCC--CCCCCCC
Confidence            44556655 7888888            8899999999999999998  9999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1e-08  Score=62.80  Aligned_cols=40  Identities=18%  Similarity=0.062  Sum_probs=33.4

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQC------------GKAFSQKGSLIVHIRVHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTT------------TCCBSSHHHHHTTGGGTSC--CSCCCC
T ss_pred             CccccCCCCCeeCCCc------------cchhCCHHHHHHHHHHhCC--CCCCCC
Confidence            34455554 7788887            8899999999999999998  999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=6.9e-09  Score=72.70  Aligned_cols=64  Identities=11%  Similarity=0.098  Sum_probs=52.7

Q ss_pred             HHHhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          126 TSVENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       126 ~~~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      ..|++++.++ ++.|.+|            ++.| ....|..|+ .|.+  ++||.|+.|++.|. ...|..|+++|.++
T Consensus         6 ~~H~~~~c~~r~~~C~~C------------~~~~-~~~~L~~H~-~~c~--~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQHC------------DLEL-SILKLKEHE-DYCG--ARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             SCCCCCCCCCCCEECSSS------------CCEE-CHHHHHHHH-HHHH--HCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HhhCcccCCCcccCCccc------------ChHh-hHHHHHHHH-hHcC--CCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            3444445444 7888888            7788 489999999 8988  99999999999988 58999999999987


Q ss_pred             CC
Q 038358          205 KG  206 (312)
Q Consensus       205 k~  206 (312)
                      +.
T Consensus        69 ~~   70 (75)
T 2d9k_A           69 GS   70 (75)
T ss_dssp             SS
T ss_pred             cC
Confidence            64

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.2e-08  Score=63.19  Aligned_cols=41  Identities=7%  Similarity=0.109  Sum_probs=34.7

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKC------------QATFNLRKHLIQHQKTHAA--KSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTT------------CCEESCHHHHHHHGGGGCC--CCCTTCC
T ss_pred             cccccCCCCCeECCCC------------CCccCCHHHHHHHHHHcCC--CCCcCCC
Confidence            45556655 7888888            8899999999999999998  9999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.59  E-value=1.6e-08  Score=61.85  Aligned_cols=40  Identities=15%  Similarity=-0.037  Sum_probs=34.0

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|
T Consensus         2 H~~~H~~~~~~~C~~C------------~k~f~~~~~l~~H~~~H~~--~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQC------------GKSFTQRGSLAVHQRSCSQ--SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSS------------CCEESSHHHHHHHHHHTTC--CCCCCC
T ss_pred             CCccCCCCCCeECCCC------------CcccCCHHHHHHHhhhcCC--CCCCCC
Confidence            34456655 7888888            8899999999999999998  999988

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.1e-08  Score=62.75  Aligned_cols=40  Identities=15%  Similarity=0.113  Sum_probs=34.2

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETC------------GARFVQVAHLRAHVLIHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTT------------CCEESSHHHHHHHTHHHHS--CCSSCC
T ss_pred             CCcccCCCCCEeCCCc------------ChhhCCHHHHHHHHHHcCC--CCCCCC
Confidence            44556655 7888888            8899999999999999999  999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.2e-08  Score=63.78  Aligned_cols=42  Identities=17%  Similarity=0.127  Sum_probs=35.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      |+++|.++ +|.|++|            ++.|.....|..|+++|++  ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQC------------GKAFSVRSSLTTHQAIHTG--KKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTT------------TEECSSHHHHHHHHTTSCC--CCCCCSCC
T ss_pred             cccCCCCCCCeECCCC------------ChhhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            44556655 7888888            8899999999999999998  99999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.2e-08  Score=61.99  Aligned_cols=40  Identities=10%  Similarity=0.189  Sum_probs=33.4

Q ss_pred             hhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          129 ENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       129 ~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      +++|.++ +|.|++|            ++.|.....|..|+++|++  ++||+|+
T Consensus         4 ~~~h~~~~~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQEC------------GKIFRHSSLLIEHQALHAG--ESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTT------------CCCCSSHHHHHHHHHHHTT--SCCCCCC
T ss_pred             CCCCCCCcCeECCCC------------CcccCCHHHHHHHHHHHCC--CCCCCCC
Confidence            3445554 6788887            8899999999999999998  9999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.4e-08  Score=62.20  Aligned_cols=40  Identities=13%  Similarity=0.085  Sum_probs=33.6

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      |+++|.++ +|+|++|            ++.|.....|..|+++|++  ++||+|
T Consensus         2 H~~~H~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEIC------------GTRFRHLQTLKSHLRIHTG--SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSS------------CCCBSSHHHHHHHTTTTSC--CSSTTC
T ss_pred             CCcccCCCCCEECCCC------------CCccCCHHHHHHHHHhcCC--CCCCCC
Confidence            34456555 7888888            8899999999999999998  999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.57  E-value=3.3e-08  Score=60.94  Aligned_cols=39  Identities=5%  Similarity=-0.017  Sum_probs=33.6

Q ss_pred             hccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          131 VMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       131 ~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      .|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|++
T Consensus         4 ~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNEC------------DCRFSEEASLKRHTLQTHS--DKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSS------------CCCBSSHHHHHHHHHHHTC--TTCSSSCC
T ss_pred             CcCCCCCEECCCC------------CCeeCChHHHHHHHHhhCC--CCCccCCC
Confidence            35544 7888888            8899999999999999998  99999975

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.8e-08  Score=63.60  Aligned_cols=41  Identities=15%  Similarity=0.077  Sum_probs=35.5

Q ss_pred             hhccCc-ccccc--cccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCC
Q 038358          130 NVMTVE-DHEVA--ACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSC  184 (312)
Q Consensus       130 ~~~~~~-~~~C~--~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C  184 (312)
                      ++|+++ +|+|.  .|            ++.|.....|..|+++|++  ++||+|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGC------------GWRFSRSDELSRHRRSHSG--VKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSC------------CCEESSHHHHHHHHTTSCC--CCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCC------------CCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            455555 78887  78            8899999999999999998  999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3e-08  Score=62.05  Aligned_cols=40  Identities=18%  Similarity=0.166  Sum_probs=33.8

Q ss_pred             hhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          130 NVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       130 ~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      ++|.++ +|+|++|            ++.|....+|..|+++|++  ++||+|++
T Consensus         5 ~~h~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDC------------GKFFLQASNFIQHRRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSS------------CCCCSSHHHHHHHHHHHSS--CCCSSCCC
T ss_pred             CCCCCCCCcCCCCC------------CCeeCChHHHHHHHHHhCC--CCCCCCCC
Confidence            345544 7888888            8899999999999999998  99999974

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=4.7e-08  Score=66.31  Aligned_cols=35  Identities=26%  Similarity=0.227  Sum_probs=31.6

Q ss_pred             hcCCCCcceecCC--CccccCChHHHHhHh-hhcCCCCCc
Q 038358          171 NLGGVSCRFECNS--CKKVFGSHQALGGHR-ASHKHVKGC  207 (312)
Q Consensus       171 H~~~~~k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~k~y  207 (312)
                      ++|  +|||+|..  |+++|...++|.+|+ ++|+++|||
T Consensus        22 ~sG--EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           22 YSP--YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SCS--SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             ccC--CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            345  99999975  999999999999997 689999997

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.3e-08  Score=63.64  Aligned_cols=41  Identities=10%  Similarity=-0.042  Sum_probs=34.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKEC------------GMNFSWSCSLFKHLRSHER--TDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSS------------CCEESSSHHHHHHHHHHHH--SCCSSCS
T ss_pred             cccccCCCCCeeCccc------------ChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            44556555 7888888            8899999999999999998  9999996

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.55  E-value=3.7e-08  Score=57.06  Aligned_cols=31  Identities=26%  Similarity=0.462  Sum_probs=29.4

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +||.|++|++.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.6e-08  Score=62.60  Aligned_cols=41  Identities=7%  Similarity=0.092  Sum_probs=34.8

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNEC------------GKAFTRIFHLTRHQKIHTR--KSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTT------------TEEESSSHHHHTTHHHHCC--CCCCSCC
T ss_pred             CCcCCCCCCCeECccc------------CcccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            45566655 7888888            8899999999999999998  9999983

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.4e-08  Score=57.67  Aligned_cols=34  Identities=15%  Similarity=0.307  Sum_probs=31.1

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      .|.+  ++||.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSS--GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCC--CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCC--CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4666  999999999999999999999999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.1e-08  Score=58.27  Aligned_cols=32  Identities=16%  Similarity=0.295  Sum_probs=29.3

Q ss_pred             hcCCCCcceecCC--CccccCChHHHHhHhhhcCCC
Q 038358          171 NLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       171 H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      +++  ++||+|+.  |++.|...+.|.+|+++|+++
T Consensus         4 ~~g--ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSS--GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSC--CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCC--CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            455  99999986  999999999999999999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=3.4e-08  Score=58.74  Aligned_cols=34  Identities=15%  Similarity=0.302  Sum_probs=31.3

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhH-hhhcCCC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGH-RASHKHV  204 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~~  204 (312)
                      ++|++  ++||+|++|++.|.....|..| +++|+++
T Consensus         2 ~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSS--GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSS--SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCC--CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            56887  9999999999999999999999 8999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=5.5e-08  Score=57.25  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=31.1

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      .|.+  ++||+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSS--GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCC--CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCC--CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4666  999999999999999999999999999874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.6e-08  Score=58.50  Aligned_cols=35  Identities=23%  Similarity=0.333  Sum_probs=31.8

Q ss_pred             hhhcCCCCcceecCCCccccCCh-HHHHhHhhhcCCCC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSH-QALGGHRASHKHVK  205 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~-~~L~~H~~~H~~~k  205 (312)
                      ++|.+  +++|.|++|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~--~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSS--GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCC--CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCC--CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            35777  9999999999999999 99999999999874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6e-08  Score=57.01  Aligned_cols=34  Identities=18%  Similarity=0.271  Sum_probs=31.2

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +|.+  +++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSS--GKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCC--CCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCC--CCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4666  999999999999999999999999999874

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.3e-08  Score=61.53  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=34.5

Q ss_pred             hhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCC
Q 038358          130 NVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNS  183 (312)
Q Consensus       130 ~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~  183 (312)
                      ++|.++ +|+|++|            ++.|.....|..|+++|++  +++|.|+.
T Consensus         5 ~~h~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHC------------GKSFRAKGNLVTHQRIHTG--EKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTT------------TEEESSHHHHHHHHTTTSS--CCCCCSCC
T ss_pred             CCCCCCcCccCCCC------------CCccCChHHHHHHHHHhCC--CCCCCCCC
Confidence            345555 7999998            8899999999999999998  99999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=4e-08  Score=60.85  Aligned_cols=40  Identities=13%  Similarity=0.038  Sum_probs=34.3

Q ss_pred             HhhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          128 VENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       128 ~~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      |+++|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|
T Consensus         3 H~~~H~~~k~~~C~~C------------~k~F~~~~~L~~H~~~H~~--~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNEC------------GKAFIWKSLLIVHERTHAG--VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSS------------CCEESSHHHHHHHHGGGSS--CSCCCC
T ss_pred             CCcccCCCcCeECCCC------------CcccCchHHHHHHHhHhcC--CCCCCC
Confidence            45566655 7888888            8899999999999999998  999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=5.9e-08  Score=60.66  Aligned_cols=25  Identities=36%  Similarity=0.659  Sum_probs=21.6

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|++|++.|...+.|..|+++|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoy_A           13 FKCNKCEKTFSCSKYLTQHERIHTR   37 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHTTCCS
T ss_pred             EECcCCCCcCCCHHHHHHHHHHcCC
Confidence            8888888888888888888888876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=6.8e-08  Score=57.59  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             hcCCCCcceecC--CCccccCChHHHHhHhhhcCCCCCc
Q 038358          171 NLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       171 H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |++  +++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~--~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSD--DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTT--CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCC--CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            455  8999999  5999999999999999999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=6.4e-08  Score=58.83  Aligned_cols=37  Identities=19%  Similarity=0.127  Sum_probs=32.4

Q ss_pred             hccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          131 VMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       131 ~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      +|+++ +|+|++|            ++.|.....|..|+++|++  ++||.|
T Consensus         4 ~h~~~k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQEC------------GKSFRQKGSLTLHERIHTG--SGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSS------------CCEESSHHHHHHHGGGCCC--CSCSCC
T ss_pred             ccCCCCCeECCCC------------CCCcCCHHHHHHHHHHhCC--CCCcCC
Confidence            45554 7889888            8899999999999999998  999988

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=8.1e-08  Score=56.40  Aligned_cols=34  Identities=24%  Similarity=0.342  Sum_probs=31.0

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +|.+  +++|.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~--~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSS--GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCC--CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCC--CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3566  999999999999999999999999999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=8.1e-08  Score=56.84  Aligned_cols=26  Identities=19%  Similarity=0.544  Sum_probs=24.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.....|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A           10 YSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             cCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            89999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.3e-07  Score=55.52  Aligned_cols=33  Identities=30%  Similarity=0.503  Sum_probs=30.3

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      |.+  +++|.|++|++.|.....|..|+++|++++
T Consensus         4 ~~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSS--GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSC--CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCC--CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            555  899999999999999999999999999874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.40  E-value=1.3e-07  Score=59.87  Aligned_cols=35  Identities=23%  Similarity=0.331  Sum_probs=29.7

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhh-hcCCCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRA-SHKHVKG  206 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~k~  206 (312)
                      +|++  ++||.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~--~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDR--DKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTT--TSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCC--CcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4777  999999999999999999999999 9999865

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.39  E-value=1.8e-07  Score=54.45  Aligned_cols=26  Identities=31%  Similarity=0.502  Sum_probs=24.4

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.+.+.|..|+++|+++
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            8 YVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             eECCCCcchhCCHHHHHHHHHHHcCC
Confidence            89999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=6.2e-08  Score=61.04  Aligned_cols=40  Identities=23%  Similarity=0.387  Sum_probs=35.0

Q ss_pred             HHhHHhhhcCCCCcceecC--CCccccCChHHHHhHhhhcCCCC
Q 038358          164 VQDTNEVNLGGVSCRFECN--SCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       164 L~~H~~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +..|+..|++  ++||.|+  .|++.|...+.|..|+++|++++
T Consensus         6 ~~~~~~~H~~--~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMP--DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEET--TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCC--CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4455667998  9999996  79999999999999999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.7e-07  Score=56.32  Aligned_cols=26  Identities=23%  Similarity=0.300  Sum_probs=23.5

Q ss_pred             eecCc--cccccCChhhHhhhhhhccCC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |+|++  |+++|.+.+.|.+|+++|+++
T Consensus        10 ~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A           10 LKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             EECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            88986  999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.38  E-value=2.8e-08  Score=57.08  Aligned_cols=31  Identities=29%  Similarity=0.415  Sum_probs=29.2

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +||+|++|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999984

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.36  E-value=2.7e-07  Score=53.73  Aligned_cols=26  Identities=27%  Similarity=0.606  Sum_probs=24.1

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         8 ~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            8 FVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            89999999999999999999999865

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=2.8e-07  Score=51.35  Aligned_cols=30  Identities=20%  Similarity=0.431  Sum_probs=27.9

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            479999999999999999999999999874

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=1.5e-07  Score=55.79  Aligned_cols=26  Identities=23%  Similarity=0.223  Sum_probs=23.1

Q ss_pred             eecCccccccCChhhHhhh-hhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGH-KRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H-~~~H~~~  270 (312)
                      |+|++|++.|...+.|..| +++|+++
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A           10 YYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             EECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHccCc
Confidence            8999999999999999999 8889764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.4e-08  Score=71.40  Aligned_cols=58  Identities=5%  Similarity=0.055  Sum_probs=48.2

Q ss_pred             hhhccCc-ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          129 ENVMTVE-DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       129 ~~~~~~~-~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      .++|+++ +|+|++|            ++.|.....|..|+++|++  ++||+|..|.    ....|..|+++|.+.
T Consensus        17 ~~~H~~~kpy~C~~C------------~k~F~~~~~L~~H~~~Ht~--ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHC------------DSKLQSTAELTSHLNIHNE--EFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSSS------------CCEESSHHHHHHHHHHHHH--HHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCCC------------CCEeCCHHHHHHHHHHhCC--CCCcccchhh----hHHHHHhhhcccccc
Confidence            3456655 8999988            8899999999999999999  9999998754    566788888998874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=3.1e-07  Score=53.91  Aligned_cols=26  Identities=31%  Similarity=0.485  Sum_probs=24.0

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A           10 YDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             eECCCCCCccCCHHHHHHHHHHhcCC
Confidence            89999999999999999999999865

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.30  E-value=3.4e-07  Score=50.68  Aligned_cols=29  Identities=31%  Similarity=0.506  Sum_probs=27.0

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.30  E-value=2.9e-07  Score=54.54  Aligned_cols=33  Identities=24%  Similarity=0.378  Sum_probs=30.0

Q ss_pred             hcCCCCcceecCC--CccccCChHHHHhHhhhcCCCC
Q 038358          171 NLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       171 H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      |++  +++|.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~--~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGK--KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSS--CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCC--CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            566  99999995  9999999999999999999874

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=6.6e-07  Score=60.73  Aligned_cols=41  Identities=22%  Similarity=0.269  Sum_probs=35.2

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCC
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEI  219 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~  219 (312)
                      |.+  ++||+|.+|++.|.....|..|+++|+++..      .+..++.
T Consensus         8 ~~~--ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~------~~~~~~~   48 (66)
T 2epp_A            8 LRE--AGILPCGLCGKVFTDANRLRQHEAQHGVTSL------QLGYIDL   48 (66)
T ss_dssp             CCC--CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC------CCCSCCC
T ss_pred             CCC--ccCcCCCCCCCccCCHHHHHhhhhhhCCCcc------ccccccC
Confidence            455  8999999999999999999999999999875      5565554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=2.5e-07  Score=54.66  Aligned_cols=26  Identities=27%  Similarity=0.339  Sum_probs=23.5

Q ss_pred             eecCccccccCCh-hhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSG-QALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~-~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|... +.|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A           10 MKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             EECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             eECCCCChhhccCHHHHHHHHHhcCCC
Confidence            8999999999998 9999999999864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=3.3e-07  Score=57.94  Aligned_cols=28  Identities=21%  Similarity=0.463  Sum_probs=24.0

Q ss_pred             eecCccccccCChhhHhhhhh-hccCCCC
Q 038358          245 HKCSICLRVFSSGQALGGHKR-CHWEKGD  272 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~-~H~~~~~  272 (312)
                      |.|.+|++.|.....|..|++ +|+++..
T Consensus         8 ~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            8 YACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             EECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            899999999999999999999 9987654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=4e-07  Score=53.38  Aligned_cols=26  Identities=31%  Similarity=0.451  Sum_probs=23.9

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A           10 FKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             EECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhccC
Confidence            89999999999999999999999864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=4.1e-07  Score=53.24  Aligned_cols=26  Identities=27%  Similarity=0.302  Sum_probs=24.0

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.....|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A           10 YKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHccCC
Confidence            89999999999999999999999865

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.26  E-value=4.9e-07  Score=49.96  Aligned_cols=29  Identities=31%  Similarity=0.623  Sum_probs=26.8

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=5.2e-07  Score=52.78  Aligned_cols=26  Identities=35%  Similarity=0.592  Sum_probs=23.7

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.....|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A           10 HLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             eecCcCCCCcCchHHHHHHHHHhcCC
Confidence            88999999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=6.1e-07  Score=49.25  Aligned_cols=28  Identities=21%  Similarity=0.464  Sum_probs=26.1

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      ++||.|++|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.23  E-value=7e-07  Score=50.75  Aligned_cols=30  Identities=27%  Similarity=0.584  Sum_probs=27.7

Q ss_pred             CcceecC--CCccccCChHHHHhHhhhcCCCC
Q 038358          176 SCRFECN--SCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       176 ~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4799999  89999999999999999999874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=4.8e-07  Score=49.94  Aligned_cols=29  Identities=28%  Similarity=0.456  Sum_probs=26.9

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.21  E-value=5.9e-07  Score=48.79  Aligned_cols=26  Identities=38%  Similarity=0.694  Sum_probs=23.2

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            78999999999999999999999864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.21  E-value=6.9e-07  Score=49.62  Aligned_cols=30  Identities=13%  Similarity=0.283  Sum_probs=27.4

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      ++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.20  E-value=8.1e-07  Score=50.13  Aligned_cols=29  Identities=31%  Similarity=0.548  Sum_probs=26.8

Q ss_pred             cceecC--CCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECN--SCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +||.|+  .||+.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.20  E-value=6.8e-07  Score=48.80  Aligned_cols=27  Identities=19%  Similarity=0.452  Sum_probs=25.1

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      ++||+|++||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999884

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=8.3e-07  Score=48.33  Aligned_cols=27  Identities=22%  Similarity=0.418  Sum_probs=25.2

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      ++||.|+.||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999885

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2.1e-07  Score=52.00  Aligned_cols=30  Identities=27%  Similarity=0.431  Sum_probs=27.6

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      ++||.|+.|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            479999999999999999999999998864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.2e-07  Score=51.58  Aligned_cols=29  Identities=28%  Similarity=0.403  Sum_probs=26.8

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=3.3e-06  Score=57.20  Aligned_cols=28  Identities=25%  Similarity=0.451  Sum_probs=25.5

Q ss_pred             eecCccccccCChhhHhhhhhhccCCCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEKGD  272 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~  272 (312)
                      |.|.+|+|.|.+.+.|..|+++|+++..
T Consensus        14 y~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A           14 LPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             cCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            8999999999999999999999998644

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=5.9e-07  Score=49.50  Aligned_cols=29  Identities=24%  Similarity=0.358  Sum_probs=26.7

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=9.9e-07  Score=51.64  Aligned_cols=26  Identities=31%  Similarity=0.599  Sum_probs=24.1

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.....|..|+++|+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A           10 FTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             EECCCCCceeCCHHHHHHHHHHhCCC
Confidence            89999999999999999999999865

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.14  E-value=8.8e-07  Score=52.99  Aligned_cols=33  Identities=9%  Similarity=0.058  Sum_probs=29.7

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      ++|+|++|            ++.|.....|..|+++|++  ++||.+
T Consensus         5 k~~~C~~C------------~k~f~~~~~L~~H~~~H~~--~k~~~~   37 (39)
T 1njq_A            5 RSYTCSFC------------KREFRSAQALGGHMNVHRR--DRARLR   37 (39)
T ss_dssp             SSEECTTT------------CCEESSHHHHHHHHHTTCC--SCTTTT
T ss_pred             CceECCCC------------CcccCCHHHHHHHHHHcCC--Ccccee
Confidence            37888888            8899999999999999998  999976

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.14  E-value=1.3e-06  Score=50.31  Aligned_cols=32  Identities=6%  Similarity=0.023  Sum_probs=27.8

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceec
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFEC  181 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C  181 (312)
                      +|.|++|            ++.|.....|..|+++|++  +++|.+
T Consensus         2 p~~C~~C------------~k~F~~~~~L~~H~~~H~~--~~~~~r   33 (33)
T 1rim_A            2 KFACPEC------------PKRFMRSDHLSKHITLHEL--LGEERR   33 (33)
T ss_dssp             CCCCSSS------------CCCCSSHHHHHHHHHHHTT--TCCCCC
T ss_pred             cccCCCC------------CchhCCHHHHHHHHHHhCC--CCCCCC
Confidence            5677777            8899999999999999999  999853

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=1.4e-06  Score=47.23  Aligned_cols=27  Identities=30%  Similarity=0.707  Sum_probs=23.8

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      ||+|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=3.5e-07  Score=57.49  Aligned_cols=33  Identities=21%  Similarity=0.423  Sum_probs=25.8

Q ss_pred             HhhhcCc---eecC--ccccccCChhhHhhhhhhccCC
Q 038358          238 KMMMVLG---HKCS--ICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       238 H~~~H~~---~~C~--~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |..+|++   |.|+  .|++.|...+.|..|+++|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3344544   8895  6999999999999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.11  E-value=1.1e-06  Score=51.96  Aligned_cols=23  Identities=35%  Similarity=0.702  Sum_probs=22.7

Q ss_pred             CcceecCCCccccCChHHHHhHh
Q 038358          176 SCRFECNSCKKVFGSHQALGGHR  198 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~  198 (312)
                      ++||+|++||+.|...++|.+|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            99999999999999999999998

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.10  E-value=1.4e-06  Score=48.44  Aligned_cols=29  Identities=21%  Similarity=0.424  Sum_probs=26.5

Q ss_pred             cceecCCCccccCChHHHHhH-hhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGH-RASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H-~~~H~~~k  205 (312)
                      +||.|+.|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 78999874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.08  E-value=1.5e-06  Score=47.96  Aligned_cols=26  Identities=27%  Similarity=0.373  Sum_probs=24.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            89999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.04  E-value=1.7e-06  Score=47.65  Aligned_cols=26  Identities=31%  Similarity=0.654  Sum_probs=23.9

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.9e-06  Score=47.21  Aligned_cols=25  Identities=32%  Similarity=0.543  Sum_probs=22.7

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|++|++.|...+.|..|+++|++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHhcCC
Confidence            8899999999999999999999874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.02  E-value=2.1e-06  Score=50.69  Aligned_cols=26  Identities=35%  Similarity=0.645  Sum_probs=23.4

Q ss_pred             eecCc--cccccCChhhHhhhhhhccCC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|.+  |++.|...+.|..|+++|+++
T Consensus         9 ~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            9 HICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            88984  999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.02  E-value=2.9e-06  Score=57.48  Aligned_cols=35  Identities=9%  Similarity=0.002  Sum_probs=30.5

Q ss_pred             ccccccc--ccchhccCCCCCCCccccCchhHHhHH-hhhcCCCCcceecCC
Q 038358          135 EDHEVAA--CLLMLANGDVGVGTGSFQQGIQVQDTN-EVNLGGVSCRFECNS  183 (312)
Q Consensus       135 ~~~~C~~--C~~~f~~~~~~~C~k~F~~~~~L~~H~-~~H~~~~~k~~~C~~  183 (312)
                      +||+|++  |            +++|.+..+|..|+ ++|++  +|||.|..
T Consensus        26 KPYkC~~~~C------------gKaFsr~s~L~~H~rriHTg--EKP~~~~~   63 (73)
T 1x3c_A           26 RPYRCVHQGC------------FAAFTIQQNLILHYQAVHKS--DLPAFSAE   63 (73)
T ss_dssp             CSCBCCSTTC------------CCBCSSHHHHHHHHHHHSSS--CCCCCCCS
T ss_pred             CCeECCCCCc------------ChhHcCHHHHHHHhhhhCCC--CCCccccc
Confidence            3888865  7            88999999999997 68999  99999965

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=2.6e-06  Score=47.16  Aligned_cols=26  Identities=27%  Similarity=0.373  Sum_probs=24.2

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.....|..|+++|+++
T Consensus         4 ~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            4 YQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             EECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhccC
Confidence            89999999999999999999999865

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=2e-06  Score=47.26  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=23.5

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhccC
Confidence            78999999999999999999999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.97  E-value=2.2e-06  Score=47.12  Aligned_cols=26  Identities=31%  Similarity=0.511  Sum_probs=24.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|.....|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             ccCCCCCCccCChhHHHHHHHHhcCC
Confidence            89999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.97  E-value=2.9e-06  Score=46.95  Aligned_cols=26  Identities=19%  Similarity=0.309  Sum_probs=24.0

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccC
Confidence            78999999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=2.4e-06  Score=46.54  Aligned_cols=24  Identities=25%  Similarity=0.434  Sum_probs=22.1

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|++||+.|...+.|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            4 YRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             EEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcC
Confidence            899999999999999999999884

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.6e-07  Score=48.86  Aligned_cols=26  Identities=27%  Similarity=0.553  Sum_probs=23.6

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            78999999999999999999999864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.94  E-value=3.7e-06  Score=47.26  Aligned_cols=26  Identities=31%  Similarity=0.597  Sum_probs=23.7

Q ss_pred             eecC--ccccccCChhhHhhhhhhccCC
Q 038358          245 HKCS--ICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~--~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|+  .||+.|...+.|..|+++|+++
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            7897  8999999999999999999875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.18  E-value=1.2e-06  Score=47.18  Aligned_cols=26  Identities=27%  Similarity=0.529  Sum_probs=24.0

Q ss_pred             cceecCCCccccCChHHHHhHhhhcC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      +||.|++||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.93  E-value=4.9e-06  Score=45.08  Aligned_cols=26  Identities=27%  Similarity=0.505  Sum_probs=24.2

Q ss_pred             CcccCccccccCCChHHHHHHHHhCC
Q 038358           77 ITRPCSECGKKFWSWKALFGHMRCHP  102 (312)
Q Consensus        77 ~~~~C~~C~k~f~~~~~L~~H~~~H~  102 (312)
                      ++|.|..||+.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            57999999999999999999999885

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.88  E-value=5.5e-06  Score=48.88  Aligned_cols=25  Identities=28%  Similarity=0.304  Sum_probs=23.2

Q ss_pred             CCCCcccCccccccCCChHHHHHHH
Q 038358           74 APKITRPCSECGKKFWSWKALFGHM   98 (312)
Q Consensus        74 ~~~~~~~C~~C~k~f~~~~~L~~H~   98 (312)
                      .++++|.|++||+.|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4567899999999999999999998

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=5.9e-06  Score=46.71  Aligned_cols=26  Identities=35%  Similarity=0.557  Sum_probs=23.4

Q ss_pred             eecC--ccccccCChhhHhhhhhhccCC
Q 038358          245 HKCS--ICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~--~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|+  .|++.|...+.|..|+++|+++
T Consensus         4 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            4 YSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            7898  8999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=5.6e-06  Score=45.89  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=23.3

Q ss_pred             eecCccccccCChhhHhhh-hhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGH-KRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H-~~~H~~~  270 (312)
                      |.|+.|++.|.+.+.|..| +++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             cCCcccCcccCChHHHHHHHHHHccCC
Confidence            7899999999999999999 7899864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.9e-06  Score=47.87  Aligned_cols=26  Identities=35%  Similarity=0.487  Sum_probs=23.4

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|+.|++.|...+.|..|+++|+++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            78999999999999999999999864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.08  E-value=2e-06  Score=46.28  Aligned_cols=24  Identities=29%  Similarity=0.457  Sum_probs=20.4

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|++||+.|.+.+.|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            788888888888888888888874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.84  E-value=9.2e-06  Score=44.51  Aligned_cols=27  Identities=22%  Similarity=0.620  Sum_probs=24.9

Q ss_pred             cceecC--CCccccCChHHHHhHhhhcCC
Q 038358          177 CRFECN--SCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       177 k~~~C~--~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            579999  999999999999999999975

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.82  E-value=1.5e-06  Score=49.61  Aligned_cols=30  Identities=10%  Similarity=0.165  Sum_probs=26.4

Q ss_pred             ccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcce
Q 038358          136 DHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRF  179 (312)
Q Consensus       136 ~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~  179 (312)
                      +|+|++|            ++.|....+|..|+++|++  ++||
T Consensus         2 p~~C~~C------------~k~f~~~~~L~~H~~~H~~--~kp~   31 (32)
T 2kfq_A            2 AFACPAC------------PKRFMRSDALSKHIKTAFI--VVAL   31 (32)
T ss_dssp             CSSSSSS------------CTTHHHHHTTSSSTTSSSS--SSSC
T ss_pred             CCCCCCC------------CcccCCHHHHHHHHHHHcc--CCCC
Confidence            5677777            8899999999999999998  8887

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.78  E-value=9.8e-06  Score=47.81  Aligned_cols=31  Identities=10%  Similarity=0.160  Sum_probs=27.3

Q ss_pred             cccccc--cccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcce
Q 038358          135 EDHEVA--ACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRF  179 (312)
Q Consensus       135 ~~~~C~--~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~  179 (312)
                      ++|+|+  .|            ++.|....+|..|+++|++  +++|
T Consensus         5 k~~~C~~~~C------------~k~f~~~~~L~~H~~~H~~--~k~~   37 (38)
T 1bhi_A            5 KPFLCTAPGC------------GQRFTNEDHLAVHKHKHEM--TLKF   37 (38)
T ss_dssp             CCEECCCTTT------------CCEESSHHHHHHHHHHHHT--TTTT
T ss_pred             cceECCCCCC------------CcccCCHHHHHHHHHHhCC--CCCC
Confidence            378888  48            8899999999999999998  8887

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.76  E-value=1.1e-05  Score=44.26  Aligned_cols=25  Identities=32%  Similarity=0.531  Sum_probs=23.0

Q ss_pred             eecC--ccccccCChhhHhhhhhhccC
Q 038358          245 HKCS--ICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~--~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|+  .|++.|...+.|..|+++|++
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            8899  999999999999999999974

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.10  E-value=0.00066  Score=45.40  Aligned_cols=48  Identities=13%  Similarity=0.129  Sum_probs=40.5

Q ss_pred             CCccccCchhHHhHH-hhhcCCC----CcceecC--CCccccCChHHHHhHhhhc
Q 038358          154 GTGSFQQGIQVQDTN-EVNLGGV----SCRFECN--SCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       154 C~k~F~~~~~L~~H~-~~H~~~~----~k~~~C~--~C~~~F~~~~~L~~H~~~H  201 (312)
                      |++.|.+...|..|+ +.|.+..    ..+|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            589999999999998 5798721    1289996  8999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.79  E-value=0.0013  Score=43.85  Aligned_cols=53  Identities=15%  Similarity=0.095  Sum_probs=37.4

Q ss_pred             CCccccCChHHHHhHh-hhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecC--ccccccCChhh
Q 038358          183 SCKKVFGSHQALGGHR-ASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCS--ICLRVFSSGQA  259 (312)
Q Consensus       183 ~C~~~F~~~~~L~~H~-~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~--~C~k~F~~~~~  259 (312)
                      .|++.|.+...|..|+ ..|.+.++-           .  ....                   |.|.  .|++.+.....
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~-----------~--~~~~-------------------~~C~W~~C~~~~~~~~~   55 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFK-----------H--PMEP-------------------LACNWEDCDFLGDDTAS   55 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCC-----------C--SSCC-------------------EECCCSSCCCEESSHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccC-----------C--CCCC-------------------CEeeCCCCcCCCCChHH
Confidence            4999999999999998 478876520           0  0000                   6775  67777777778


Q ss_pred             Hhhhhhhc
Q 038358          260 LGGHKRCH  267 (312)
Q Consensus       260 L~~H~~~H  267 (312)
                      |..|+++.
T Consensus        56 L~~Hir~~   63 (64)
T 1zw8_A           56 IVNHINAQ   63 (64)
T ss_dssp             HHHHHHHH
T ss_pred             HHhhcccc
Confidence            88887764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.74  E-value=0.0031  Score=47.75  Aligned_cols=33  Identities=21%  Similarity=0.264  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhc
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  201 (312)
                      +...|+|  +++|.|..|++.|.+...|..|+++.
T Consensus        41 ~ded~tG--ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPG--GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGG--GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCC--CcceEcccCcchhCCHHHHHHHHhhh
Confidence            3456888  99999999999999999999998753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.44  E-value=0.0057  Score=37.35  Aligned_cols=24  Identities=29%  Similarity=0.451  Sum_probs=21.4

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|+.|++.|.....|+.||+---
T Consensus        13 ~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             eeCCcccccccchHHHHhhhhhcC
Confidence            899999999999999999998543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.04  E-value=0.014  Score=44.53  Aligned_cols=72  Identities=17%  Similarity=0.169  Sum_probs=48.3

Q ss_pred             CcceecCCCccccCChHHHHhHh--hhcCCC-CCcccccccCCCC-------CCCCcCCCCCccccchhhHhHhhhcCc-
Q 038358          176 SCRFECNSCKKVFGSHQALGGHR--ASHKHV-KGCFAITRSSDGC-------EIDHDHCSDGIVKENVDDERKMMMVLG-  244 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~--~~H~~~-k~y~~~~~~C~~C-------~~~f~~~~~~~~~~~~~l~~H~~~H~~-  244 (312)
                      .+++.|.+|...|.+.+.+..|.  +.|... +.|     .+ .+       ++.+...            .+...+.+ 
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~-----~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~   91 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRY-----MA-INQGEDSVPAKKFKAA------------PAEISDGED   91 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHH-----HH-HTTCCCCCSCCCCSCC------------SSCCSSCCC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHH-----hc-ccCcccCCCCCccCCC------------ccccccCCC
Confidence            57899999999999999999998  456432 221     11 11       1222210            11122222 


Q ss_pred             --eecCccccccCChhhHhhhhh
Q 038358          245 --HKCSICLRVFSSGQALGGHKR  265 (312)
Q Consensus       245 --~~C~~C~k~F~~~~~L~~H~~  265 (312)
                        |.|.+|++.|.+...|..|..
T Consensus        92 ~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           92 RSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCeEcCCCCCEeCCHHHHHHHHC
Confidence              889999999999999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.74  E-value=0.0096  Score=45.00  Aligned_cols=28  Identities=32%  Similarity=0.524  Sum_probs=24.3

Q ss_pred             hhhcCc---eecCccccccCChhhHhhhhhh
Q 038358          239 MMMVLG---HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       239 ~~~H~~---~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      ...|+|   |.|..|++.|.+.+.|..|+++
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            345666   9999999999999999999875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.98  E-value=0.038  Score=33.76  Aligned_cols=24  Identities=33%  Similarity=0.559  Sum_probs=22.0

Q ss_pred             CcccCccccccCCChHHHHHHHHh
Q 038358           77 ITRPCSECGKKFWSWKALFGHMRC  100 (312)
Q Consensus        77 ~~~~C~~C~k~f~~~~~L~~H~~~  100 (312)
                      .+|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            368999999999999999999984

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.51  E-value=0.062  Score=40.91  Aligned_cols=24  Identities=21%  Similarity=0.296  Sum_probs=18.8

Q ss_pred             CcceecCCCccccCChHHHHhHhh
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRA  199 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~  199 (312)
                      .+.|.|.+|.+.|.+...|..|..
T Consensus        91 ~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           91 DRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCeEcCCCCCEeCCHHHHHHHHC
Confidence            456778888888888888888865

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.08  E-value=0.1  Score=41.62  Aligned_cols=79  Identities=13%  Similarity=0.141  Sum_probs=49.0

Q ss_pred             Ccceec--CCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---eecCcc
Q 038358          176 SCRFEC--NSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---HKCSIC  250 (312)
Q Consensus       176 ~k~~~C--~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C~~C  250 (312)
                      +....|  ..|+..+. ...|..|...- ..++     ..|+.|+..+..         ..|..|....-.   -.|+.|
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~-----v~C~~C~~~~~r---------~~l~~H~~~~C~~r~~~C~~C  143 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQAHC-EFAL-----MDCPQCQRPFQK---------FHINIHILKDCPRRQVSCDNC  143 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHTTC-TTSE-----EECTTTCCEEEG---------GGHHHHHHHTCTTCEEECTTT
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHhcC-Ccee-----eECCCCChHHHH---------HHHHHHhhhhCCCCCeECCCC
Confidence            355667  45776655 44667776321 2233     378888876643         266777753333   779999


Q ss_pred             ccccCChhhHhhhhhhccCCC
Q 038358          251 LRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       251 ~k~F~~~~~L~~H~~~H~~~~  271 (312)
                      +..|.. ..|..|+.++.|+.
T Consensus       144 ~~~~~~-~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          144 AASMAF-EDKEIHDQNCPLAL  163 (170)
T ss_dssp             CCEEEG-GGHHHHHTTCCC--
T ss_pred             CCccCH-HHHHhHHHhCcChh
Confidence            887744 57788998888764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.15  E-value=0.15  Score=29.01  Aligned_cols=24  Identities=25%  Similarity=0.461  Sum_probs=21.3

Q ss_pred             eecCccccccCChhhHhhhhhh-cc
Q 038358          245 HKCSICLRVFSSGQALGGHKRC-HW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~-H~  268 (312)
                      |.|++|.+.|.+...|..|... |.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            8999999999999999999754 54

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.04  E-value=0.5  Score=37.51  Aligned_cols=49  Identities=10%  Similarity=0.119  Sum_probs=32.5

Q ss_pred             CccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      +..+ .+..|..|+...-.  .+.-.|+.|+..|.. ..|..|..+++|+.++
T Consensus       117 ~~~~-~r~~l~~H~~~~C~--~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          117 QRPF-QKFHINIHILKDCP--RRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             CCEE-EGGGHHHHHHHTCT--TCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             ChHH-HHHHHHHHhhhhCC--CCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            4444 45677888766655  777888888887754 5678888888887663

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.83  E-value=0.19  Score=34.37  Aligned_cols=50  Identities=14%  Similarity=0.276  Sum_probs=37.3

Q ss_pred             cccccCCCCCCCCcCCCCCccccchhhHhHhhhcCc---eecCccccccCChhhHhhhhhhcc
Q 038358          209 AITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLG---HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       209 ~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~---~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      +..|.|+.||..+.-         ..|..|...-.+   |.|-.|++.|.. ..++.|-.--+
T Consensus         8 MV~F~C~~Cgd~lKK---------~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsCIS   60 (79)
T 1wjv_A            8 MVFFTCNACGESVKK---------IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKCIS   60 (79)
T ss_dssp             CCEEEESSSCCEEET---------THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCCCS
T ss_pred             eeEEEcCCCCCeeec---------ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeeeCC
Confidence            446899999987765         377889865544   999999999996 55777765444

>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.42  E-value=0.57  Score=29.90  Aligned_cols=40  Identities=18%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             cCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccCChhhHhhhhhhccCCCCCC
Q 038358          213 SSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFSSGQALGGHKRCHWEKGDDP  274 (312)
Q Consensus       213 ~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~  274 (312)
                      .|.+|+. ...                     |.|+.|+..|-+..-++.|.....++...|
T Consensus        14 ~C~vC~~-~~k---------------------Y~CPrC~~~yCSl~C~k~Hk~~C~~~~~~p   53 (56)
T 2yqq_A           14 VCVICLE-KPK---------------------YRCPACRVPYCSVVCFRKHKEQCNPETSGP   53 (56)
T ss_dssp             CCTTTCS-CCS---------------------EECTTTCCEESSHHHHHHHHHHCCCCCSSC
T ss_pred             ccCcCcC-CCe---------------------eeCCCCCCCeeCHHHHHHHHhhCcCCcCCC
Confidence            5899988 555                     999999999999999999987766654334

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=82.38  E-value=1  Score=25.58  Aligned_cols=27  Identities=33%  Similarity=0.506  Sum_probs=23.0

Q ss_pred             cceecCCCccccCChHHHHhHhh-hcCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRA-SHKH  203 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~-~H~~  203 (312)
                      ..|.|++|-+.|.+...|..|.. .|..
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            35999999999999999999975 4654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=81.38  E-value=0.57  Score=32.76  Aligned_cols=23  Identities=30%  Similarity=0.382  Sum_probs=19.4

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      ..|-+||+.|..   |.+|+++|+|-
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgl   44 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSM   44 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCS
T ss_pred             eEecccchhhHH---HHHHHHHccCC
Confidence            789999999994   77999997654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=80.04  E-value=1.8  Score=24.75  Aligned_cols=25  Identities=24%  Similarity=0.457  Sum_probs=21.8

Q ss_pred             CCcccCccccccCCChHHHHHHHHh
Q 038358           76 KITRPCSECGKKFWSWKALFGHMRC  100 (312)
Q Consensus        76 ~~~~~C~~C~k~f~~~~~L~~H~~~  100 (312)
                      ...+.|..|+-+|.+...+..|.+.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3457999999999999999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	312
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-09
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	8e-08
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	8e-05

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.9 bits (117), Expect = 6e-09
 Identities = 13/26 (50%), Positives = 14/26 (53%)

Query: 245 HKCSICLRVFSSGQALGGHKRCHWEK 270
           + CS C R F S QALGGH   H   
Sbjct: 6   YTCSFCKREFRSAQALGGHMNVHRRD 31

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.5 bits (108), Expect = 8e-08
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 179 FECNSCKKVFGSHQALGGHRASHKH 203
           + C+ CK+ F S QALGGH   H+ 
Sbjct: 6   YTCSFCKREFRSAQALGGHMNVHRR 30

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.0 bits (86), Expect = 8e-05
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 75  PKITRPCSECGKKFWSWKALFGHMRCH 101
           P  +  CS C ++F S +AL GHM  H
Sbjct: 2   PPRSYTCSFCKREFRSAQALGGHMNVH 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.64
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.52
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.17
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.14
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.14
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.03
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.02
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.99
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.98
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.98
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.95
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.91
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.82
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.78
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.69
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.67
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.65
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.61
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.57
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.43
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.41
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.39
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.36
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.3
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.21
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.19
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.12
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.9
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.89
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.85
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.7
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.7
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.63
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.58
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.41
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.41
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.33
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.3
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.29
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.26
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.21
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.04
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.92
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.81
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.69
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.66
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.64
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.62
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.56
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.41
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.37
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.04
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.84
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.69
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.49
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.34
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.23
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.08
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.05
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.95
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.94
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.8
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.43
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.29
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.27
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.26
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.25
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.25
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.34
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	93.24
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.38
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.98
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.95
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.59
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	90.36
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.03
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.46
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.16
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.16
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.14
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.68
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.13
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.43
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.34
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.96
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	84.33
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	83.43
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.41
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.92
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.56
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	81.8
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	81.51
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	81.28
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.27

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6.5e-17  Score=104.59  Aligned_cols=53  Identities=25%  Similarity=0.515  Sum_probs=46.1

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCCCcCCCCCccccchhhHhHhhhcCceecCccccccC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEIDHDHCSDGIVKENVDDERKMMMVLGHKCSICLRVFS  255 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~f~~~~~~~~~~~~~l~~H~~~H~~~~C~~C~k~F~  255 (312)
                      ||||+|+ ||+.|....+|..|+++|+|++|                                      |.|++||++|.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekp--------------------------------------y~C~~C~k~F~   41 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP--------------------------------------YGCGVCGKKFK   41 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCS--------------------------------------EECTTTSCEES
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccC--------------------------------------CcCCCcCCEec
Confidence            6899995 99999999999999999999999                                      67777777777


Q ss_pred             ChhhHhhhhhhc
Q 038358          256 SGQALGGHKRCH  267 (312)
Q Consensus       256 ~~~~L~~H~~~H  267 (312)
                      +.+.|..|+++|
T Consensus        42 ~~~~L~~H~r~H   53 (53)
T d2csha1          42 MKHHLVGHMKIH   53 (53)
T ss_dssp             SSHHHHHHHTTT
T ss_pred             CHHHHHHHHhcC
Confidence            777777777776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.4e-15  Score=96.31  Aligned_cols=52  Identities=27%  Similarity=0.426  Sum_probs=48.8

Q ss_pred             cccccccccchhccCCCCCCCccccCchhHHhHHhhhcCCCCcceecCCCccccCChHHHHhHhhhc
Q 038358          135 EDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       135 ~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  201 (312)
                      ++|+| .|            |++|....+|..|+++|+|  ++||.|.+||+.|...+.|..|+++|
T Consensus         2 K~y~C-~C------------gk~F~~~~~l~~H~~~Ht~--ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QC------------GKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TT------------SCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CC------------CCeECCHHHhHHHhhcccc--ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            47888 48            8899999999999999999  99999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.2e-13  Score=78.08  Aligned_cols=37  Identities=24%  Similarity=0.485  Sum_probs=35.4

Q ss_pred             hHHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          166 DTNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       166 ~H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      +|+++|++  +|||+|++||+.|...++|..|+++|+||
T Consensus         2 rH~~~Ht~--ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRE--RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCC--SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCC--CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            58899999  99999999999999999999999999997

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.3e-12  Score=77.22  Aligned_cols=26  Identities=35%  Similarity=0.609  Sum_probs=23.2

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|||+|.+.++|..|+++|+||
T Consensus        13 y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          13 YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             EecCCCCceeeCHHHHHHhCccCCCC
Confidence            78889999999999999999999886

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.1e-12  Score=71.26  Aligned_cols=33  Identities=24%  Similarity=0.482  Sum_probs=31.5

Q ss_pred             hhcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          170 VNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       170 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      +|+|  +|||+|.+||+.|...+.|..|+++|+||
T Consensus         1 IHTg--ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSG--EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTT--CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCC--CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            5888  99999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.5e-11  Score=72.44  Aligned_cols=36  Identities=28%  Similarity=0.478  Sum_probs=32.9

Q ss_pred             CCcceecCCCccccCChHHHHhHhh-hcCCCCCcccccccCC
Q 038358          175 VSCRFECNSCKKVFGSHQALGGHRA-SHKHVKGCFAITRSSD  215 (312)
Q Consensus       175 ~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~k~y~~~~~~C~  215 (312)
                      .+|||+|.+||+.|....+|.+|++ +|+|+|||     +|+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy-----~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH-----KCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC-----CSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCc-----CCc
Confidence            3899999999999999999999976 79999995     776

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1e-11  Score=70.35  Aligned_cols=26  Identities=31%  Similarity=0.488  Sum_probs=24.1

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |+|.+||++|.+.+.|..|+++|+||
T Consensus         8 y~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           8 YGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             EECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             eeCCCCCCEeCchHHhHhhccccCCC
Confidence            89999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.7e-11  Score=70.40  Aligned_cols=35  Identities=23%  Similarity=0.428  Sum_probs=32.7

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      |+|+|  ||||+|.+||++|...+.|..|+++|+++.
T Consensus         1 R~HTg--ekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTG--EKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCC--CCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCC--CCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57998  999999999999999999999999998763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2e-11  Score=71.45  Aligned_cols=35  Identities=26%  Similarity=0.508  Sum_probs=33.2

Q ss_pred             HHhhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          167 TNEVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       167 H~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |.|+|+|  ||||+|++|++.|..+++|..|+++|.+
T Consensus         2 h~R~HTg--eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG--IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC--SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC--ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6789999  9999999999999999999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.5e-11  Score=69.88  Aligned_cols=27  Identities=26%  Similarity=0.369  Sum_probs=24.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~~  271 (312)
                      |+|.+||++|.+.+.|..|+++|+++.
T Consensus         9 y~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           9 YACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             EECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            899999999999999999999998763

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.03  E-value=5.6e-11  Score=65.27  Aligned_cols=29  Identities=31%  Similarity=0.623  Sum_probs=27.9

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      |||+|++|++.|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=4.7e-11  Score=69.86  Aligned_cols=25  Identities=32%  Similarity=0.557  Sum_probs=19.5

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |+|++|+++|.+.++|..|+++|.+
T Consensus        12 y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_          12 FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6777888888888888888888753

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=1e-10  Score=67.00  Aligned_cols=32  Identities=22%  Similarity=0.433  Sum_probs=30.0

Q ss_pred             hcCCCCcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          171 NLGGVSCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       171 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |+|  ||||+|++|++.|.++++|.+|+++|+.+
T Consensus         2 ~TG--ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSG--KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSC--CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCC--CccccCCCCCCcccChHHHHHHccccCCc
Confidence            567  99999999999999999999999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=7e-11  Score=64.10  Aligned_cols=28  Identities=25%  Similarity=0.523  Sum_probs=27.0

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      ||||+|++|++.|...++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=9.4e-11  Score=68.97  Aligned_cols=36  Identities=11%  Similarity=0.198  Sum_probs=32.1

Q ss_pred             CcccccccccchhccCCCCCCCccccCchhHHhHHh-hhcCCCCcceecCC
Q 038358          134 VEDHEVAACLLMLANGDVGVGTGSFQQGIQVQDTNE-VNLGGVSCRFECNS  183 (312)
Q Consensus       134 ~~~~~C~~C~~~f~~~~~~~C~k~F~~~~~L~~H~~-~H~~~~~k~~~C~~  183 (312)
                      ++||+|++|            |+.|...++|.+|++ +|+|  +|||+|++
T Consensus         3 ~Kpy~C~~C------------gk~F~~~~~L~~H~r~~Ht~--ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSC------------GKGFSRPDHLNGHIKQVHTS--ERPHKCQV   39 (39)
T ss_dssp             SCCEECSSS------------CCEESSHHHHHHHHHHTSCC--CCCCCSSS
T ss_pred             CCCccCCCC------------CCCcCChHHhhccCcCccCC--CcCcCCcC
Confidence            458888888            889999999999986 7999  99999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.1e-10  Score=64.00  Aligned_cols=29  Identities=31%  Similarity=0.589  Sum_probs=27.8

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      |||.|++||+.|...++|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.9e-10  Score=65.93  Aligned_cols=26  Identities=27%  Similarity=0.606  Sum_probs=23.7

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |+|++|+|.|.+.++|.+|+++|+++
T Consensus         8 y~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           8 FVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             ccCCCCCCcccChHHHHHHccccCCc
Confidence            89999999999999999999999864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=6.7e-11  Score=72.89  Aligned_cols=41  Identities=20%  Similarity=0.355  Sum_probs=36.9

Q ss_pred             hhHHhHHhhhcCCCCcceecCC--CccccCChHHHHhHhhhcCCCC
Q 038358          162 IQVQDTNEVNLGGVSCRFECNS--CKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       162 ~~L~~H~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      ..|..|+. |+|  ++||+|..  |++.|...++|..|+++|+|||
T Consensus         5 ~~l~~h~~-h~g--ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMP--DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EET--TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccC--CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45677775 998  99999987  9999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.6e-10  Score=66.00  Aligned_cols=33  Identities=18%  Similarity=0.370  Sum_probs=29.3

Q ss_pred             hhhcCCCCcceecCCCccccCChHHHHhHhhhcCC
Q 038358          169 EVNLGGVSCRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       169 ~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |+|+|  ||||+|++|++.|....+|.+|++.+++
T Consensus         1 R~HTg--ekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSG--EKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSC--CCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCC--CCCEeCCCCcccccchHHHHHHcccccC
Confidence            57888  9999999999999999999999865444

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.3e-10  Score=65.06  Aligned_cols=26  Identities=19%  Similarity=0.344  Sum_probs=21.8

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |+|++|++.|.+.++|.+|++.|+++
T Consensus         9 ~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           9 YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             EeCCCCcccccchHHHHHHcccccCC
Confidence            89999999999999999998655443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.82  E-value=6.1e-10  Score=61.02  Aligned_cols=26  Identities=31%  Similarity=0.654  Sum_probs=24.7

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++||++|.+.+.|.+|+++|+||
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           3 FVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CCCCCCCCCCCCchHcccccCcccCC
Confidence            89999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=5.3e-10  Score=60.54  Aligned_cols=25  Identities=40%  Similarity=0.728  Sum_probs=22.7

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |+|++|+|+|.+.+.|..|+|+|+|
T Consensus         4 y~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             ccCCCCcCEecccccccccCCCccC
Confidence            8899999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=7.8e-10  Score=60.47  Aligned_cols=26  Identities=27%  Similarity=0.530  Sum_probs=24.5

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++|||+|.+.+.|.+|+++|+|+
T Consensus         3 y~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           3 FACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             SCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             EECCcCCCeecchHHhhhhcCccCCc
Confidence            88999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=8.6e-10  Score=58.18  Aligned_cols=26  Identities=27%  Similarity=0.585  Sum_probs=24.9

Q ss_pred             cceecCCCccccCChHHHHhHhhhcC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      |||+|..||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=5.5e-10  Score=68.70  Aligned_cols=26  Identities=23%  Similarity=0.575  Sum_probs=23.4

Q ss_pred             eecCc--cccccCChhhHhhhhhhccCC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++  |+++|...++|..|+++|+|+
T Consensus        19 y~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          19 FECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             eECCcCCCCccccCchHHHhhcccccCC
Confidence            88977  999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.1e-09  Score=58.40  Aligned_cols=28  Identities=25%  Similarity=0.451  Sum_probs=26.6

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |||+|+.  |++.|...++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999988  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2.1e-09  Score=56.65  Aligned_cols=24  Identities=38%  Similarity=0.578  Sum_probs=22.2

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |+|++|||+|...+.|..|+|+|+
T Consensus         3 y~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCccCCC
Confidence            899999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.6e-09  Score=58.23  Aligned_cols=28  Identities=29%  Similarity=0.405  Sum_probs=26.3

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |||.|+.  |++.|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=5.9e-09  Score=60.01  Aligned_cols=29  Identities=28%  Similarity=0.566  Sum_probs=23.0

Q ss_pred             eecCC--CccccCChHHHHhHhhhcCCCCCc
Q 038358          179 FECNS--CKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       179 ~~C~~--C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      |.|+.  |++.|.....|++|+++|+|++||
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy   32 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   32 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCE
Confidence            67765  888888888888888888888884

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8.3e-09  Score=57.25  Aligned_cols=29  Identities=31%  Similarity=0.548  Sum_probs=26.8

Q ss_pred             cceecC--CCccccCChHHHHhHhhhcCCCC
Q 038358          177 CRFECN--SCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       177 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      |||.|+  .|++.|...++|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689995  59999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=6.6e-09  Score=59.79  Aligned_cols=27  Identities=11%  Similarity=0.256  Sum_probs=25.7

Q ss_pred             CCccccCchhHHhHHhhhcCCCCcceecC
Q 038358          154 GTGSFQQGIQVQDTNEVNLGGVSCRFECN  182 (312)
Q Consensus       154 C~k~F~~~~~L~~H~~~H~~~~~k~~~C~  182 (312)
                      |+++|.++.+|++|+++|+|  +|||+|+
T Consensus         9 C~k~F~~~~~L~~H~r~Htg--ekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSD--TRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHT--SCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCC--CCCEeCC
Confidence            49999999999999999999  9999997

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=9.3e-09  Score=56.45  Aligned_cols=26  Identities=35%  Similarity=0.663  Sum_probs=23.8

Q ss_pred             eecCc--cccccCChhhHhhhhhhccCC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++  |+|+|.+.+.|.+|+|+|+||
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             eeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            78888  999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1e-08  Score=56.38  Aligned_cols=26  Identities=31%  Similarity=0.507  Sum_probs=24.1

Q ss_pred             eecCc--cccccCChhhHhhhhhhccCC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|++  |||+|.+.+.|.+|+|+|+||
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             ccCCCCCCCceECcHHHcCccccccCCC
Confidence            88977  999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.43  E-value=3.3e-08  Score=53.67  Aligned_cols=27  Identities=22%  Similarity=0.477  Sum_probs=25.3

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |||+|++  |++.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999987  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.41  E-value=7.2e-08  Score=53.63  Aligned_cols=29  Identities=28%  Similarity=0.602  Sum_probs=26.8

Q ss_pred             CcceecCC--CccccCChHHHHhHhhhcCCC
Q 038358          176 SCRFECNS--CKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       176 ~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      ||||.|+.  |++.|...++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=6e-08  Score=53.67  Aligned_cols=26  Identities=31%  Similarity=0.597  Sum_probs=23.1

Q ss_pred             eecC--ccccccCChhhHhhhhhhccCC
Q 038358          245 HKCS--ICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~--~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|+  .|||+|.+.++|.+|+++|+|+
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            7785  5999999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=9e-08  Score=47.82  Aligned_cols=25  Identities=44%  Similarity=0.886  Sum_probs=22.4

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      ++|++|+|.|+++..|..|+|.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            5799999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.30  E-value=9.1e-08  Score=51.90  Aligned_cols=25  Identities=36%  Similarity=0.569  Sum_probs=22.3

Q ss_pred             eecCc--cccccCChhhHhhhhhhccC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|++  |+|+|.+.+.|.+|+|+|+|
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             eECCCCCCCcEECchhHhhhhcCccCC
Confidence            78877  99999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.6e-07  Score=49.61  Aligned_cols=32  Identities=28%  Similarity=0.469  Sum_probs=29.8

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCc
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGC  207 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y  207 (312)
                      .+...|+.||+.|.....|.+|...|++||||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            46788999999999999999999999999996

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.1e-07  Score=50.97  Aligned_cols=26  Identities=27%  Similarity=0.535  Sum_probs=23.6

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~  202 (312)
                      |||.|+.  ||+.|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899987  9999999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=2.9e-07  Score=47.54  Aligned_cols=27  Identities=22%  Similarity=0.470  Sum_probs=25.6

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      |+||.|++||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4e-07  Score=45.43  Aligned_cols=26  Identities=27%  Similarity=0.562  Sum_probs=23.6

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |++|+.|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.19  E-value=5e-07  Score=50.10  Aligned_cols=29  Identities=28%  Similarity=0.552  Sum_probs=26.4

Q ss_pred             CCcccCcc--ccccCCChHHHHHHHHhCCCC
Q 038358           76 KITRPCSE--CGKKFWSWKALFGHMRCHPER  104 (312)
Q Consensus        76 ~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  104 (312)
                      ++||.|++  |++.|....+|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            46899998  999999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=3e-07  Score=49.24  Aligned_cols=24  Identities=25%  Similarity=0.470  Sum_probs=16.8

Q ss_pred             eecCc--cccccCChhhHhhhhhhcc
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|+.  |||+|.+.++|.+|+|+|+
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            56655  7777777777777777764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.5e-06  Score=44.18  Aligned_cols=26  Identities=27%  Similarity=0.521  Sum_probs=23.6

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      +.|.+|||+|.-.+.|.+|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            67999999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.3e-06  Score=42.49  Aligned_cols=27  Identities=26%  Similarity=0.428  Sum_probs=23.3

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      .+.|..||+.|...+.|++|+.+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467889999999999999999999885

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=4.3e-06  Score=42.71  Aligned_cols=29  Identities=24%  Similarity=0.327  Sum_probs=27.4

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |+||+|.+|...-...+.|..|.+.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999985

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3.8e-06  Score=43.17  Aligned_cols=26  Identities=23%  Similarity=0.215  Sum_probs=24.2

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|+.||......+.|.+|+|+|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999976

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.2e-06  Score=43.73  Aligned_cols=29  Identities=21%  Similarity=0.383  Sum_probs=27.2

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |+||.|++|+..|..+..+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=5.6e-06  Score=42.62  Aligned_cols=27  Identities=26%  Similarity=0.423  Sum_probs=25.0

Q ss_pred             CCcccCccccccCCChHHHHHHHHhCC
Q 038358           76 KITRPCSECGKKFWSWKALFGHMRCHP  102 (312)
Q Consensus        76 ~~~~~C~~C~k~f~~~~~L~~H~~~H~  102 (312)
                      ++||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            468999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.70  E-value=1.1e-05  Score=39.78  Aligned_cols=24  Identities=42%  Similarity=0.749  Sum_probs=21.9

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |+|..|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=7.9e-06  Score=40.89  Aligned_cols=25  Identities=32%  Similarity=0.486  Sum_probs=23.5

Q ss_pred             ecCccccccCChhhHhhhhhhccCC
Q 038358          246 KCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       246 ~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      +|+.|.|.|.++..|..|-|.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            6999999999999999999999986

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=1.6e-05  Score=39.78  Aligned_cols=26  Identities=38%  Similarity=0.542  Sum_probs=22.6

Q ss_pred             ecCCCccccCChHHHHhHhhhcCCCC
Q 038358          180 ECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       180 ~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      +|+.|.+.|.++..|+.|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68889999999999999999898875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.4e-05  Score=40.14  Aligned_cols=28  Identities=21%  Similarity=0.453  Sum_probs=25.4

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCCCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKHVK  205 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~~k  205 (312)
                      .|.|+.||......+-|++|++.|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3789999999999999999999999874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.41  E-value=4.5e-05  Score=42.86  Aligned_cols=29  Identities=45%  Similarity=0.749  Sum_probs=26.1

Q ss_pred             eecCccccccCChhhHhhhhhhccCCCCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEKGDD  273 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~  273 (312)
                      |+|.+|++.|.+...|-.||+.|..+...
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~~r~~   34 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRRDRAR   34 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             cCCCCCCCccCCcccccchHhhhcchHHH
Confidence            99999999999999999999999766543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=3.5e-05  Score=40.18  Aligned_cols=29  Identities=24%  Similarity=0.448  Sum_probs=26.5

Q ss_pred             CCcccCccccccCCChHHHHHHHHhCCCC
Q 038358           76 KITRPCSECGKKFWSWKALFGHMRCHPER  104 (312)
Q Consensus        76 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  104 (312)
                      ++||.|++|+.+|..+..+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            36899999999999999999999999863

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=6.2e-05  Score=38.01  Aligned_cols=26  Identities=19%  Similarity=0.475  Sum_probs=25.0

Q ss_pred             cceecCCCccccCChHHHHhHhhhcC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999996

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.33  E-value=7.7e-05  Score=36.60  Aligned_cols=24  Identities=33%  Similarity=0.779  Sum_probs=21.6

Q ss_pred             eecCCCccccCChHHHHhHhhhcC
Q 038358          179 FECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      |+|..|.+.|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999885

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.30  E-value=8.8e-05  Score=41.65  Aligned_cols=31  Identities=39%  Similarity=0.757  Sum_probs=28.3

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKG  206 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~  206 (312)
                      .+.|+|.+|++.|.+..+|-.|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            5789999999999999999999999987764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=5.7e-05  Score=39.36  Aligned_cols=25  Identities=16%  Similarity=0.441  Sum_probs=21.7

Q ss_pred             eecCc--cccccCChhhHhhhhhhccC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|.+  |+|++...+.|++|++.++|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            77876  99999999999999998765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=6.1e-05  Score=40.19  Aligned_cols=24  Identities=8%  Similarity=0.127  Sum_probs=22.5

Q ss_pred             CccccCchhHHhHHhhhcCCCCccee
Q 038358          155 TGSFQQGIQVQDTNEVNLGGVSCRFE  180 (312)
Q Consensus       155 ~k~F~~~~~L~~H~~~H~~~~~k~~~  180 (312)
                      ||.|....+|.+|...|.|  ||||.
T Consensus        12 gk~frdvyhlnrhklshs~--ekpys   35 (35)
T d2epra1          12 GKIFRDVYHLNRHKLSHSG--EKPYS   35 (35)
T ss_dssp             TEEESSHHHHHHHGGGSCS--CCCCC
T ss_pred             HHHHHHHHHHHhhhcccCC--CCCCC
Confidence            8899999999999999999  99983

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00012  Score=38.11  Aligned_cols=27  Identities=19%  Similarity=0.389  Sum_probs=23.6

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |||.|.+  |++.+...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899977  99999999999999997654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.0002  Score=36.57  Aligned_cols=29  Identities=28%  Similarity=0.480  Sum_probs=27.0

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      +..|.|..|...|...-.|+.|+..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            67899999999999999999999999986

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00011  Score=37.48  Aligned_cols=23  Identities=30%  Similarity=0.577  Sum_probs=20.1

Q ss_pred             eecCc--cccccCChhhHhhhhhhc
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCH  267 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H  267 (312)
                      |+|+.  |++.|...+.|.+|.++|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            77866  999999999999998887

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00015  Score=37.01  Aligned_cols=26  Identities=27%  Similarity=0.461  Sum_probs=24.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|..|...|..+-.|+.||-.|+|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            88999999999999999999999885

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0003  Score=36.11  Aligned_cols=28  Identities=18%  Similarity=0.367  Sum_probs=24.7

Q ss_pred             cceecCCCccccCChHHHHhHhhh-cCCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRAS-HKHV  204 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~-H~~~  204 (312)
                      +||+|..|.......++|+.|+++ |..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            699999999999999999999986 5544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00023  Score=35.90  Aligned_cols=24  Identities=29%  Similarity=0.449  Sum_probs=20.6

Q ss_pred             eecCccccccCChhhHhhhhhhcc
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |+|..|+.+-...+.|.+|+|+|.
T Consensus         4 ~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           4 YKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHSC
T ss_pred             cccccccchhcchhhHhhhhhccc
Confidence            788888888888888888888885

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.81  E-value=0.00038  Score=36.50  Aligned_cols=27  Identities=22%  Similarity=0.482  Sum_probs=23.9

Q ss_pred             ceecCCCccccCChHHHHhHhh-hcCCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRA-SHKHV  204 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~-~H~~~  204 (312)
                      ||.|.+|++.|..+.-|.+|++ .|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7999999999999999999975 57763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00041  Score=35.23  Aligned_cols=26  Identities=31%  Similarity=0.451  Sum_probs=19.2

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |+|..|...-...+.|..|+|.|+|+
T Consensus         4 fkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           4 FKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             ceeeecccccCCchheEEeeecccCc
Confidence            67777777777777777777777763

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.69  E-value=0.00037  Score=35.67  Aligned_cols=28  Identities=32%  Similarity=0.540  Sum_probs=22.5

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      +||.|..  |.+.|.+.-.|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5777854  888888888888888888875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.66  E-value=0.00049  Score=36.08  Aligned_cols=26  Identities=27%  Similarity=0.521  Sum_probs=22.5

Q ss_pred             eecCccccccCChhhHhhhh-hhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHK-RCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~-~~H~~~  270 (312)
                      |.|.+|++.|+.+..|.+|+ +.|.|.
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cccccccchhhHHHHHHHHHHHHhcCc
Confidence            78999999999999999996 677653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00059  Score=38.41  Aligned_cols=24  Identities=29%  Similarity=0.501  Sum_probs=22.5

Q ss_pred             CcceecCCCccccCChHHHHhHhh
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRA  199 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~  199 (312)
                      .|||.|.+|++.|--..++.+|..
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhh
Confidence            899999999999999999999964

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00034  Score=36.71  Aligned_cols=28  Identities=21%  Similarity=0.535  Sum_probs=23.8

Q ss_pred             cceecCC--CccccCChHHHHhHh-hhcCCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHR-ASHKHV  204 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~  204 (312)
                      |||.|..  |.++|...+.--+|+ ++|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899977  999999999999997 788753

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.56  E-value=0.00075  Score=34.34  Aligned_cols=25  Identities=32%  Similarity=0.622  Sum_probs=22.1

Q ss_pred             cceecCC--CccccCChHHHHhHhhhc
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASH  201 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H  201 (312)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899965  999999999999999887

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00068  Score=34.60  Aligned_cols=22  Identities=23%  Similarity=0.461  Sum_probs=20.5

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |.|..|..+|.++.+|.+||+.
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHS
T ss_pred             cccceeeeeEeeccchhHhhhh
Confidence            7899999999999999999975

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0013  Score=33.49  Aligned_cols=24  Identities=25%  Similarity=0.527  Sum_probs=22.0

Q ss_pred             ceecCCCccccCChHHHHhHhhhc
Q 038358          178 RFECNSCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H  201 (312)
                      ||.|..|...|.++.+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999853

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0011  Score=34.67  Aligned_cols=25  Identities=28%  Similarity=0.549  Sum_probs=16.7

Q ss_pred             eecCc--cccccCChhhHhhhh-hhccC
Q 038358          245 HKCSI--CLRVFSSGQALGGHK-RCHWE  269 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~-~~H~~  269 (312)
                      |.|.+  |.|+|...+.-.+|+ |+|..
T Consensus         3 Y~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             ccccCCChhhhhcchhhhhhhccccccC
Confidence            55655  777777777777775 67654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0025  Score=35.80  Aligned_cols=25  Identities=20%  Similarity=0.409  Sum_probs=22.4

Q ss_pred             CCCcccCccccccCCChHHHHHHHH
Q 038358           75 PKITRPCSECGKKFWSWKALFGHMR   99 (312)
Q Consensus        75 ~~~~~~C~~C~k~f~~~~~L~~H~~   99 (312)
                      +.+||.|..|+|.|-.+.++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4578999999999999999999964

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0028  Score=35.08  Aligned_cols=27  Identities=26%  Similarity=0.564  Sum_probs=24.5

Q ss_pred             Ccceec--CCCccccCChHHHHhHhhhcC
Q 038358          176 SCRFEC--NSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       176 ~k~~~C--~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      +|||.|  +-|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            899999  559999999999999998874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.69  E-value=0.0032  Score=31.44  Aligned_cols=23  Identities=35%  Similarity=0.625  Sum_probs=20.6

Q ss_pred             ceecCCCccccCChHHHHhHhhh
Q 038358          178 RFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      ||+|..||+.+..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.49  E-value=0.0043  Score=30.22  Aligned_cols=22  Identities=27%  Similarity=0.667  Sum_probs=20.6

Q ss_pred             ceecCCCccccCChHHHHhHhh
Q 038358          178 RFECNSCKKVFGSHQALGGHRA  199 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~  199 (312)
                      ||+|..|...|.++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999974

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0039  Score=31.80  Aligned_cols=27  Identities=22%  Similarity=0.322  Sum_probs=23.4

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      +||+|+.|..--.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            699999999999999999999875433

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.34  E-value=0.0033  Score=32.02  Aligned_cols=26  Identities=27%  Similarity=0.401  Sum_probs=20.3

Q ss_pred             eecCc--cccccCChhhHhhhhhhccCC
Q 038358          245 HKCSI--CLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~--C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|..  |.|.|.+.-.|.+|..+|+|+
T Consensus         3 fpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           3 FPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             EECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             cCcccccccccchhhhhhhhhhccccCC
Confidence            55544  888888888888888888874

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.23  E-value=0.0048  Score=30.03  Aligned_cols=20  Identities=35%  Similarity=0.604  Sum_probs=18.0

Q ss_pred             eecCccccccCChhhHhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHK  264 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~  264 (312)
                      |+|.-|...|.++..|..||
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            88999999999999999887

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0079  Score=34.96  Aligned_cols=25  Identities=28%  Similarity=0.551  Sum_probs=23.1

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |.|-.|||.|.....|+.|...|--
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeccccccccCCHHHHhHhHHhcCc
Confidence            8999999999999999999998853

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.05  E-value=0.0077  Score=30.04  Aligned_cols=22  Identities=27%  Similarity=0.644  Sum_probs=20.2

Q ss_pred             cccCccccccCCChHHHHHHHH
Q 038358           78 TRPCSECGKKFWSWKALFGHMR   99 (312)
Q Consensus        78 ~~~C~~C~k~f~~~~~L~~H~~   99 (312)
                      ||.|..||+.|..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5899999999999999999975

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.011  Score=29.62  Aligned_cols=26  Identities=27%  Similarity=0.354  Sum_probs=22.9

Q ss_pred             ceecCCCccccCChHHHHhHhhhcCC
Q 038358          178 RFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      |-+|+.|.....++..|+.|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999854

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0048  Score=33.36  Aligned_cols=24  Identities=38%  Similarity=0.382  Sum_probs=18.4

Q ss_pred             cCccccccCChhhHhhhhhhccCC
Q 038358          247 CSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       247 C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.-=++.|.....|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456688888999999999875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.0066  Score=30.48  Aligned_cols=23  Identities=48%  Similarity=0.577  Sum_probs=17.6

Q ss_pred             ecCccccccCChhhHhhhhhhcc
Q 038358          246 KCSICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       246 ~C~~C~k~F~~~~~L~~H~~~H~  268 (312)
                      +|+.|..+..++..|+.|.|+|-
T Consensus         4 kc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGGC
T ss_pred             cCcccccccCcHHHHHHhhcccc
Confidence            67777777777788888877774

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.0069  Score=30.31  Aligned_cols=22  Identities=32%  Similarity=0.527  Sum_probs=20.6

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |+|+.|+-...+++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            8999999999999999999874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.016  Score=30.86  Aligned_cols=26  Identities=19%  Similarity=0.356  Sum_probs=23.3

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|..|||.|.++..+.+|-...+|.
T Consensus         5 fvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCCC
Confidence            89999999999999999998877763

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.016  Score=30.85  Aligned_cols=27  Identities=22%  Similarity=0.543  Sum_probs=23.9

Q ss_pred             cceecCCCccccCChHHHHhHhhhcCC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHKH  203 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~~  203 (312)
                      ..|.|..||++|..+..+.+|...-+|
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            468999999999999999999877665

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.012  Score=30.03  Aligned_cols=26  Identities=19%  Similarity=0.309  Sum_probs=19.9

Q ss_pred             eecCccccccCChhhHhhhhhhccCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |+|..|...-...++|..|+++-+++
T Consensus         3 y~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             ccccccccccccchhhhhhhhccccc
Confidence            67888888888888888888775543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.011  Score=29.81  Aligned_cols=22  Identities=27%  Similarity=0.679  Sum_probs=18.8

Q ss_pred             ecCc--cccccCChhhHhhhhhhc
Q 038358          246 KCSI--CLRVFSSGQALGGHKRCH  267 (312)
Q Consensus       246 ~C~~--C~k~F~~~~~L~~H~~~H  267 (312)
                      .|+.  |+|.|...+.+++|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            3544  999999999999999888

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.011  Score=34.37  Aligned_cols=26  Identities=35%  Similarity=0.584  Sum_probs=23.5

Q ss_pred             cceecCCCccccCChHHHHhHhhhcC
Q 038358          177 CRFECNSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       177 k~~~C~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      -.|.|-+|||.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            46899999999999999999998874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.01  Score=30.19  Aligned_cols=25  Identities=20%  Similarity=0.276  Sum_probs=20.8

Q ss_pred             eecCccccccCChhhHhhhhhhccC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      |+|..|..--.+.++|..|++.-+|
T Consensus         3 FkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           3 FKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             cccceecccccCcchHHHHHHHHcc
Confidence            7899999888999999999875444

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.015  Score=31.40  Aligned_cols=24  Identities=33%  Similarity=0.379  Sum_probs=19.6

Q ss_pred             CccccccCCChHHHHHHHHhCCCC
Q 038358           81 CSECGKKFWSWKALFGHMRCHPER  104 (312)
Q Consensus        81 C~~C~k~f~~~~~L~~H~~~H~~~  104 (312)
                      |.-=++.|...+.|..||++|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            344467799999999999999874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.022  Score=31.40  Aligned_cols=27  Identities=26%  Similarity=0.402  Sum_probs=23.7

Q ss_pred             CCcccC--ccccccCCChHHHHHHHHhCC
Q 038358           76 KITRPC--SECGKKFWSWKALFGHMRCHP  102 (312)
Q Consensus        76 ~~~~~C--~~C~k~f~~~~~L~~H~~~H~  102 (312)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            578999  559999999999999998775

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.38  E-value=0.047  Score=26.52  Aligned_cols=22  Identities=23%  Similarity=0.498  Sum_probs=20.1

Q ss_pred             eecCCCccccCChHHHHhHhhh
Q 038358          179 FECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       179 ~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999875

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.98  E-value=0.031  Score=27.64  Aligned_cols=24  Identities=25%  Similarity=0.380  Sum_probs=18.1

Q ss_pred             eecC--ccccccCChhhHhhhhhhcc
Q 038358          245 HKCS--ICLRVFSSGQALGGHKRCHW  268 (312)
Q Consensus       245 ~~C~--~C~k~F~~~~~L~~H~~~H~  268 (312)
                      |.|.  -|||+|..-..|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4553  38888888888888887775

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.95  E-value=0.043  Score=26.67  Aligned_cols=22  Identities=18%  Similarity=0.611  Sum_probs=19.9

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |.|+.|=|.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.59  E-value=0.14  Score=26.78  Aligned_cols=22  Identities=32%  Similarity=0.384  Sum_probs=20.4

Q ss_pred             cccCccccccCCChHHHHHHHH
Q 038358           78 TRPCSECGKKFWSWKALFGHMR   99 (312)
Q Consensus        78 ~~~C~~C~k~f~~~~~L~~H~~   99 (312)
                      .|.|.-||-+|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5899999999999999999975

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.56  E-value=0.061  Score=28.25  Aligned_cols=21  Identities=33%  Similarity=0.497  Sum_probs=19.4

Q ss_pred             eecCccccccCChhhHhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKR  265 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~  265 (312)
                      |.|.-||-.|.+.+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            899999999999999999975

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.36  E-value=0.092  Score=26.10  Aligned_cols=23  Identities=30%  Similarity=0.702  Sum_probs=21.1

Q ss_pred             ceecCCCccccCChHHHHhHhhh
Q 038358          178 RFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      .|+|+.|+-....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999874

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.03  E-value=0.076  Score=26.20  Aligned_cols=24  Identities=38%  Similarity=0.775  Sum_probs=16.4

Q ss_pred             eec--CCCccccCChHHHHhHhhhcC
Q 038358          179 FEC--NSCKKVFGSHQALGGHRASHK  202 (312)
Q Consensus       179 ~~C--~~C~~~F~~~~~L~~H~~~H~  202 (312)
                      |.|  +-|++.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  347777777777777776664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.46  E-value=0.23  Score=24.97  Aligned_cols=25  Identities=28%  Similarity=0.501  Sum_probs=21.2

Q ss_pred             cccCccccccCCChHHHHHHHH-hCC
Q 038358           78 TRPCSECGKKFWSWKALFGHMR-CHP  102 (312)
Q Consensus        78 ~~~C~~C~k~f~~~~~L~~H~~-~H~  102 (312)
                      .|.|..|||...+...++.|.. -|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            4899999999999999999964 554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.16  E-value=0.067  Score=34.05  Aligned_cols=22  Identities=36%  Similarity=0.702  Sum_probs=20.6

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |-|..|+|.|.+...|..|+++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            8899999999999999999864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.16  E-value=0.14  Score=26.30  Aligned_cols=28  Identities=21%  Similarity=0.465  Sum_probs=19.4

Q ss_pred             cceecCC--CccccCChHHHHhHhhhcCCC
Q 038358          177 CRFECNS--CKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       177 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      |.|.|..  |+..|.....|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4566643  777777777777777777764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.14  E-value=0.17  Score=25.26  Aligned_cols=19  Identities=32%  Similarity=0.672  Sum_probs=15.4

Q ss_pred             CCccccCChHHHHhHhhhc
Q 038358          183 SCKKVFGSHQALGGHRASH  201 (312)
Q Consensus       183 ~C~~~F~~~~~L~~H~~~H  201 (312)
                      -|++.|...+.+++|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3888888888888888776

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.68  E-value=0.13  Score=26.41  Aligned_cols=26  Identities=19%  Similarity=0.281  Sum_probs=22.6

Q ss_pred             eec--CccccccCChhhHhhhhhhccCC
Q 038358          245 HKC--SICLRVFSSGQALGGHKRCHWEK  270 (312)
Q Consensus       245 ~~C--~~C~k~F~~~~~L~~H~~~H~~~  270 (312)
                      |.|  +.|+..|....-|..|+-.|+||
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            667  45999999999999999999885

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.13  E-value=0.069  Score=33.11  Aligned_cols=27  Identities=26%  Similarity=0.320  Sum_probs=24.6

Q ss_pred             eecCccccccCChhhHhhhhhhccCCC
Q 038358          245 HKCSICLRVFSSGQALGGHKRCHWEKG  271 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~H~~~~  271 (312)
                      |+|.+|+-.|-+...|..|+-.|.++-
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hneef   45 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHNEEF   45 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhccHHH
Confidence            999999999999999999999997543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.43  E-value=0.37  Score=24.22  Aligned_cols=23  Identities=26%  Similarity=0.486  Sum_probs=19.4

Q ss_pred             ceecCCCccccCChHHHHhHhhh
Q 038358          178 RFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       178 ~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      .|.|..||+...+...++-|+..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            47899999999999999988764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.34  E-value=0.11  Score=32.47  Aligned_cols=12  Identities=8%  Similarity=0.091  Sum_probs=6.7

Q ss_pred             ccCCCCCCCCcC
Q 038358          212 RSSDGCEIDHDH  223 (312)
Q Consensus       212 ~~C~~C~~~f~~  223 (312)
                      |+|+.|+++|+.
T Consensus        15 y~Cp~C~~~ys~   26 (62)
T d1vd4a_          15 FKCPVCSSTFTD   26 (62)
T ss_dssp             EECSSSCCEEEH
T ss_pred             eECCCCCCCcch
Confidence            455555555554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.96  E-value=0.14  Score=31.92  Aligned_cols=37  Identities=16%  Similarity=0.268  Sum_probs=25.1

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCCCCcccccccCCCCCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHVKGCFAITRSSDGCEID  220 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~k~y~~~~~~C~~C~~~  220 (312)
                      ...|.|+.|+++|.....++. +..-.+.       |.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L-~d~~~~~-------F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL-FDPMTGT-------FRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH-EETTTTE-------EBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh-cCcCCCe-------EEecCCCCE
Confidence            568999999999998776554 1122222       677777654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.33  E-value=0.32  Score=25.78  Aligned_cols=22  Identities=23%  Similarity=0.529  Sum_probs=20.2

Q ss_pred             eecCccccccCChhhHhhhhhh
Q 038358          245 HKCSICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~~~  266 (312)
                      |.|.+|.+.+...+++-+|.-+
T Consensus         9 yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHHHh
Confidence            9999999999999999999754

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.43  E-value=0.54  Score=26.86  Aligned_cols=25  Identities=20%  Similarity=0.276  Sum_probs=23.4

Q ss_pred             CcceecCCCccccCChHHHHhHhhh
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      +.|-.|++|+....+..+|++|...
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999875

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.41  E-value=0.14  Score=31.64  Aligned_cols=29  Identities=21%  Similarity=0.496  Sum_probs=25.9

Q ss_pred             CcceecCCCccccCChHHHHhHhhhcCCC
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRASHKHV  204 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  204 (312)
                      ...|+|..|+..|-+...|..|...|..+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            45799999999999999999999998644

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.92  E-value=0.23  Score=31.38  Aligned_cols=25  Identities=24%  Similarity=0.368  Sum_probs=22.1

Q ss_pred             CcceecCCCccccCChHHHHhHhhh
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      .-.|-|..|++.|.+...|..|++.
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3468999999999999999999864

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.56  E-value=0.42  Score=24.00  Aligned_cols=24  Identities=21%  Similarity=0.512  Sum_probs=19.7

Q ss_pred             cceecC--CCccccCChHHHHhHhhh
Q 038358          177 CRFECN--SCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       177 k~~~C~--~C~~~F~~~~~L~~H~~~  200 (312)
                      +.|.|+  .|+..|.++.+++.|...
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhh
Confidence            357885  599999999999999753

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.80  E-value=0.38  Score=24.08  Aligned_cols=19  Identities=42%  Similarity=0.611  Sum_probs=15.6

Q ss_pred             CccccccCChhhHhhhhhh
Q 038358          248 SICLRVFSSGQALGGHKRC  266 (312)
Q Consensus       248 ~~C~k~F~~~~~L~~H~~~  266 (312)
                      +-||+.|+.+..|..|++-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            3499999999999988763

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=81.51  E-value=0.37  Score=35.99  Aligned_cols=35  Identities=23%  Similarity=0.294  Sum_probs=26.9

Q ss_pred             hhHhHhhh--cCc--------eecCccccccCChhhHhhhhhhccC
Q 038358          234 DDERKMMM--VLG--------HKCSICLRVFSSGQALGGHKRCHWE  269 (312)
Q Consensus       234 ~l~~H~~~--H~~--------~~C~~C~k~F~~~~~L~~H~~~H~~  269 (312)
                      .|..|++.  -+|        |+|..||| +..-.+|.+||+.|-.
T Consensus       126 rlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG~  170 (218)
T d2czra1         126 ALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGI  170 (218)
T ss_dssp             HHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTC
T ss_pred             HHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcCc
Confidence            55667653  334        99999997 7888899999999853

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.28  E-value=0.61  Score=24.91  Aligned_cols=31  Identities=26%  Similarity=0.497  Sum_probs=24.5

Q ss_pred             eecCccccccCChhhHhhhh-hhccCCCCCCc
Q 038358          245 HKCSICLRVFSSGQALGGHK-RCHWEKGDDPL  275 (312)
Q Consensus       245 ~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~~  275 (312)
                      ..|-+|-++|++...+.+|+ .+|......|.
T Consensus         4 ltclecmrtfkssfsiwrhqvevhnqn~m~p~   35 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT   35 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheeccccccCcc
Confidence            56999999999999999997 67765555443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.27  E-value=0.32  Score=25.78  Aligned_cols=25  Identities=16%  Similarity=0.527  Sum_probs=22.7

Q ss_pred             CcceecCCCccccCChHHHHhHhhh
Q 038358          176 SCRFECNSCKKVFGSHQALGGHRAS  200 (312)
Q Consensus       176 ~k~~~C~~C~~~F~~~~~L~~H~~~  200 (312)
                      +..|+|.+|.+.+...+++-+|..+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            6789999999999999999999764