Citrus Sinensis ID: 038785

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
EHRPKLSVTEAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDEKKLVGYYDTEHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQESANKLDGLLSINK
cccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHcccccccEEEEEcccccccccccEEEEEEEccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEccccccccccccccccccccccccEEEEccccccEEEEEcccccEEEcccccccEEEEcccHHHHHHcccccccccEEEccccccEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccc
ccccccccccHccccEEEccccccccccHccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHHccccccEEEEEEEEcccccHHHEEEEEEcccccccccccHHcccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccccccccccccEEEEEEccccccEEEEEccccEEEEEcccccEEEEEEccEEEEEEcccEEEEEEEEEEEcccccEEEEEEcccccccEEcccHHHHccccccccccccHHHHHHHHHHccccHHcHHHHHHHHHHHHHcccccccEEEEcc
ehrpklsvteaegiplidlsalsatstniknpdstISDLVQQIGNACKNWGFFqvinhgvpfdkrrSIENAARKFFEQPLEEKRKVRRDEKKLvgyydtehtknvRDWKEVFDFVvespclmpaspepedkEVAETysqwpdyppeLREAFEEYAKEVEKLAYKLIELIALSlglpanrfngffkdqttfarlnhyppcpaphltlgvgrhkdsgaltilaqddvgglevkkksdgewarvkpipnsyiinigDCIQVWSNDAYETVEHRVVVNsekerlsipilfnpshytmmkpldelineqnpakyraynwgkYFTSRLHSnlkkldvenLQIYHFKVQEsankldgllsink
ehrpklsvteaegiplidlSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARkffeqpleekrkvrrdekklvgyydtehtknvrdwKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTIlaqddvgglevkkksdgewarvkpipnsyiinIGDCIQVWSNDAYETVEHRVvvnsekerlsipilfnpshYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFkvqesankldgllsink
EHRPKLSVTEAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLeekrkvrrdekkLVGYYDTEHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQESANKLDGLLSINK
***************LIDL***************TISDLVQQIGNACKNWGFFQVINHGVPFDKRRSI***********************KLVGYYDTEHTKNVRDWKEVFDFVVESPCL******************W**Y**ELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQE*************
*HRPKLSVTEAEGIPLIDLSALSATSTNIKNP*STISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKR***********YYDTEHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQESANKLDGLL****
********TEAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDEKKLVGYYDTEHTKNVRDWKEVFDFVVESPCLMP*************YSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQESANKLDGLLSINK
*****LSVTEAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDEKKLVGYYDTEHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQESANKLDGLLS***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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EHRPKLSVTEAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDEKKLVGYYDTEHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQESANKLDGLLSINK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.823 0.811 0.346 2e-47
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.828 0.875 0.354 4e-47
Q9LTH8364 1-aminocyclopropane-1-car no no 0.792 0.774 0.346 2e-46
D4N500364 Thebaine 6-O-demethylase N/A no 0.778 0.760 0.332 2e-46
Q9M547334 Flavonol synthase/flavano N/A no 0.800 0.853 0.364 3e-46
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.800 0.789 0.340 4e-46
Q39224358 Protein SRG1 OS=Arabidops no no 0.775 0.770 0.343 5e-46
Q39110377 Gibberellin 20 oxidase 1 no no 0.887 0.838 0.327 1e-45
P93824360 1-aminocyclopropane-1-car no no 0.803 0.794 0.343 2e-45
D4N502360 Codeine O-demethylase OS= N/A no 0.823 0.813 0.334 7e-45
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function desciption
 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 167/332 (50%), Gaps = 39/332 (11%)

Query: 12  EGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENA 71
           E IP+ID+S L   S +            + + +A + WGFFQVINHGV  +   +++ A
Sbjct: 60  ESIPVIDISNLDEKSVS------------KAVCDAAEEWGFFQVINHGVSMEVLENMKTA 107

Query: 72  ARKFFEQPLEEKRKVRRDEKKL-----VGYYDTEHTKNVRDWKEVFDFVVESPCLMPASP 126
             +FF  P+EEKRK  R EK L      G   + H +   +WK+       S        
Sbjct: 108 THRFFGLPVEEKRKFSR-EKSLSTNVRFGTSFSPHAEKALEWKDYLSLFFVSE------- 159

Query: 127 EPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLP-ANRFNGFFK 185
                  AE    WPD     R    EY  E + L  KL+  +  +L +   ++    F 
Sbjct: 160 -------AEASQLWPD---SCRSETLEYMNETKPLVKKLLRFLGENLNVKELDKTKESFF 209

Query: 186 DQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIP 245
             +T   LN+YP CP P LT+GVGRH D  +LTIL QD++GGL V+  + G W  V PI 
Sbjct: 210 MGSTRINLNYYPICPNPELTVGVGRHSDVSSLTILLQDEIGGLHVRSLTTGRWVHVPPIS 269

Query: 246 NSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQN 305
            S +INIGD +Q+ SN  Y++VEHRV+ N    R+S+PI  +P   +++ PL E+I    
Sbjct: 270 GSLVINIGDAMQIMSNGRYKSVEHRVLANGSYNRISVPIFVSPKPESVIGPLLEVIENGE 329

Query: 306 PAKYRAY---NWGKYFTSRLHSNLKKLDVENL 334
              Y+     ++ K+F  + H   K +D  N+
Sbjct: 330 KPVYKDILYTDYVKHFFRKAHDGKKTIDFANI 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
224123248369 2-oxoglutarate-dependent dioxygenase [Po 0.991 0.956 0.711 1e-152
255556243363 Gibberellin 20 oxidase, putative [Ricinu 0.963 0.944 0.686 1e-139
147860285342 hypothetical protein VITISV_033067 [Viti 0.926 0.964 0.679 1e-135
359475398342 PREDICTED: LOW QUALITY PROTEIN: naringen 0.926 0.964 0.670 1e-134
225428679342 PREDICTED: naringenin,2-oxoglutarate 3-d 0.926 0.964 0.673 1e-133
147820907342 hypothetical protein VITISV_001938 [Viti 0.926 0.964 0.667 1e-133
225428668342 PREDICTED: protein SRG1 [Vitis vinifera] 0.926 0.964 0.685 1e-131
147820404342 hypothetical protein VITISV_011476 [Viti 0.926 0.964 0.661 1e-131
147771160 568 hypothetical protein VITISV_032921 [Viti 0.926 0.580 0.676 1e-131
359475228342 PREDICTED: gibberellin 20 oxidase 1-like 0.926 0.964 0.685 1e-131
>gi|224123248|ref|XP_002330269.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222871304|gb|EEF08435.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 254/357 (71%), Positives = 306/357 (85%), Gaps = 4/357 (1%)

Query: 1   EHRPKLSVTEAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGV 60
           EHRPKL +  AEGIPLIDLS + + +TN+ N  + + DLV++IGNACKN GFFQVINHGV
Sbjct: 13  EHRPKLEIIIAEGIPLIDLSIICSRNTNLDNCQA-LDDLVKEIGNACKNLGFFQVINHGV 71

Query: 61  PFDKRRSIENAARKFFEQPLEEKRKVRRDEKKLVGYYDTEHTKNVRDWKEVFDFVVESPC 120
           P DKR+ IENA+R+FF QPLEEKRKVRRD +K++GY DTEHTKNVRDWKEVFDF V++P 
Sbjct: 72  PLDKRQKIENASRQFFGQPLEEKRKVRRDGRKVLGYSDTEHTKNVRDWKEVFDFAVKTPT 131

Query: 121 LMPASPEPEDKEVAETY-SQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANR 179
           ++P+S EP+DKEV E +  QWP+YP ELREA EEYAK+VEKLA+KL+ L+ALSLGLP NR
Sbjct: 132 IVPSSYEPDDKEVTEWFHDQWPEYPLELREALEEYAKDVEKLAFKLLGLVALSLGLPENR 191

Query: 180 FNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWA 239
           F+GFF+DQT+F RLNHYPPCP P L LGVGRHKD GALTILA+DDVGGLEVK+K+DGEW 
Sbjct: 192 FHGFFEDQTSFIRLNHYPPCPVPQLALGVGRHKDGGALTILAEDDVGGLEVKRKTDGEWI 251

Query: 240 RVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDE 299
           RVKP P+++IIN+GD IQVWSNDAYE+VEHRV+VNSE+ER SIP  FNP+HYT +KPL+E
Sbjct: 252 RVKPTPDAFIINVGDIIQVWSNDAYESVEHRVMVNSERERFSIPFFFNPAHYTDVKPLEE 311

Query: 300 LINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKVQES--ANKLDGLLSI 354
           L NEQNP +Y+ YNWGK+F +R  SN KKLDVEN+QIYHF++ ES  A+KL+G LSI
Sbjct: 312 LTNEQNPVRYKPYNWGKFFVTRKRSNFKKLDVENIQIYHFRILESELADKLEGALSI 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255556243|ref|XP_002519156.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223541819|gb|EEF43367.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147860285|emb|CAN83555.1| hypothetical protein VITISV_033067 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359475398|ref|XP_003631677.1| PREDICTED: LOW QUALITY PROTEIN: naringenin,2-oxoglutarate 3-dioxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225428679|ref|XP_002284940.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Vitis vinifera] gi|297741347|emb|CBI32478.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147820907|emb|CAN71980.1| hypothetical protein VITISV_001938 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225428668|ref|XP_002284910.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297741358|emb|CBI32489.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147820404|emb|CAN63356.1| hypothetical protein VITISV_011476 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147771160|emb|CAN76442.1| hypothetical protein VITISV_032921 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359475228|ref|XP_003631618.1| PREDICTED: gibberellin 20 oxidase 1-like [Vitis vinifera] gi|297741342|emb|CBI32473.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
TAIR|locus:2085864352 AT3G19000 [Arabidopsis thalian 0.935 0.946 0.543 6.9e-102
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.938 0.957 0.488 5.9e-96
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.775 0.758 0.374 1.5e-49
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.794 0.762 0.355 7.7e-48
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.747 0.764 0.376 5.4e-47
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.775 0.790 0.376 6.9e-47
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.727 0.733 0.372 1.9e-44
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.797 0.782 0.338 1.7e-43
TAIR|locus:2165341378 GA20OX2 "gibberellin 20 oxidas 0.893 0.841 0.307 4.1e-43
TAIR|locus:2005511377 GA20OX1 [Arabidopsis thaliana 0.890 0.840 0.322 1.5e-42
TAIR|locus:2085864 AT3G19000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
 Identities = 188/346 (54%), Positives = 242/346 (69%)

Query:     1 EHRPKLSVTEA------EGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQ 54
             EHRP   +T +      + IP IDLS+L  T     + D T   + ++I  ACK WGFFQ
Sbjct:    13 EHRPNTHLTNSGDFIFSDEIPTIDLSSLEDT-----HHDKTA--IAKEIAEACKRWGFFQ 65

Query:    55 VINHGVPFDKRRSIENAARKFFEQPLXXXXXXXXXXXXLVGYYDTEHTKNVRDWKEVFDF 114
             VINHG+P   R  +E  A +FF                 +GY+D EHTKNVRDWKE+FDF
Sbjct:    66 VINHGLPSALRHRVEKTAAEFFNLTTEEKRKVKRDEVNPMGYHDEEHTKNVRDWKEIFDF 125

Query:   115 VVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLG 174
              ++   ++PASPEPED E+ +  +QWP  P   RE  +EYA+EVEKLA++L+EL+++SLG
Sbjct:   126 FLQDSTIVPASPEPEDTELRKLTNQWPQNPSHFREVCQEYAREVEKLAFRLLELVSISLG 185

Query:   175 LPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKS 234
             LP +R  GFF +QT+F R NHYPPCP P L LGVGRHKD GALT+LAQD VGGL+V ++S
Sbjct:   186 LPGDRLTGFFNEQTSFLRFNHYPPCPNPELALGVGRHKDGGALTVLAQDSVGGLQVSRRS 245

Query:   235 DGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMM 294
             DG+W  VKPI ++ IIN+G+CIQVW+ND Y + EHRVVVN+ KER SIP  F PSH   +
Sbjct:   246 DGQWIPVKPISDALIINMGNCIQVWTNDEYWSAEHRVVVNTSKERFSIPFFFFPSHEANI 305

Query:   295 KPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFK 340
             +PL+ELI+E+NP  Y+ YNWGK+F SR  S+ KKL+VEN+QI HFK
Sbjct:   306 EPLEELISEENPPCYKKYNWGKFFVSRNRSDFKKLEVENIQIDHFK 351
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165341 GA20OX2 "gibberellin 20 oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005511 GA20OX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
2OGox2
2-oxoglutarate-dependent dioxygenase (353 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-176
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-79
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-77
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-72
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-72
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 5e-70
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-67
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-62
PLN02947374 PLN02947, PLN02947, oxidoreductase 3e-61
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-60
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 9e-59
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-56
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-51
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-51
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-50
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-46
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-45
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-45
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-44
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-44
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-43
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-40
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-37
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-36
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-31
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-30
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-30
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-06
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  492 bits (1267), Expect = e-176
 Identities = 217/342 (63%), Positives = 272/342 (79%), Gaps = 10/342 (2%)

Query: 1   EHRPKLSVTEA-EGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHG 59
           EHRPK  +T + E IP+IDLS   +TS +         ++  +IG ACK WGFFQVINHG
Sbjct: 13  EHRPKFHLTNSDEEIPVIDLS--VSTSHDKT-------EVASKIGEACKKWGFFQVINHG 63

Query: 60  VPFDKRRSIENAARKFFEQPLEEKRKVRRDEKKLVGYYDTEHTKNVRDWKEVFDFVVESP 119
           VP + R+ +E  A++FF+Q  EEKRKV+RDE   +GY+D+EHTKN+RDWKEVFDF+V+ P
Sbjct: 64  VPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMGYHDSEHTKNIRDWKEVFDFLVQDP 123

Query: 120 CLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANR 179
            L+PASP+PED E+ +  +QWP  P   RE  +EYA++VEKLA+KL+ELI+LSLGLPA+R
Sbjct: 124 TLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQVEKLAFKLLELISLSLGLPADR 183

Query: 180 FNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWA 239
            NG+FKDQ +FAR NHYPPCPAPHL LGVGRHKD GALT+LAQDDVGGL++ ++SDGEW 
Sbjct: 184 LNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRSDGEWI 243

Query: 240 RVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDE 299
            VKPIP+++IINIG+C+QVW+ND Y + EHRVVVNS+KER SIP  F PSHY  +KPLDE
Sbjct: 244 PVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDE 303

Query: 300 LINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQIYHFKV 341
           LINEQNP KY+ +NWGK+F SR  S+ KKL+VEN+QI HFK 
Sbjct: 304 LINEQNPPKYKEFNWGKFFASRNRSDYKKLEVENIQIDHFKA 345

Length = 345
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02904357 oxidoreductase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02947374 oxidoreductase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.79
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.78
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.96
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.63
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 94.0
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.5
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 88.69
TIGR02466201 conserved hypothetical protein. This family consis 83.58
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=7.2e-79  Score=584.20  Aligned_cols=321  Identities=65%  Similarity=1.177  Sum_probs=282.0

Q ss_pred             CCCCceEeCCCCCCCCCCCCCCCchHHHHHHHHHHHhhcccEEEEecCCCCHHHHHHHHHHHHHhhcCCHHHHhhhccCC
Q 038785           11 AEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDE   90 (356)
Q Consensus        11 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~   90 (356)
                      ..+||||||+.+...         ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus        24 ~~~iPvIDls~~~~~---------~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~   94 (345)
T PLN02750         24 DEEIPVIDLSVSTSH---------DKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDE   94 (345)
T ss_pred             CCCCCeEECCCCCcc---------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence            458999999985322         36788999999999999999999999999999999999999999999999997654


Q ss_pred             CCcccccccCCCCCCCCcccceeccccCCCCCCCCCCCcchhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 038785           91 KKLVGYYDTEHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIA  170 (356)
Q Consensus        91 ~~~~GY~~~~~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~Ll~~la  170 (356)
                      ...+||...+...+..||+|.|+++...+...|.........+...+|.||+.+++||+++.+|++.|.+|+.+|+++||
T Consensus        95 ~~~~GY~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la  174 (345)
T PLN02750         95 VNPMGYHDSEHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQVEKLAFKLLELIS  174 (345)
T ss_pred             CCccCcCcccccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45679975444445679999999976543322321111111221237999998899999999999999999999999999


Q ss_pred             HHcCCCccccchhccCcccceEEeecCCCCCCCCCCcccCccCCCCeeEEeeCCCCCeeEEecCCCceEEEeecCCeEEE
Q 038785          171 LSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPNSYII  250 (356)
Q Consensus       171 ~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~~g~W~~v~p~~g~lvV  250 (356)
                      ++||+++++|.+.+.++.+.||++||||++.++..+|+++|||+|+||||+||+++||||+...+|+|++|+|.||++||
T Consensus       175 ~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g~Wi~V~p~pg~~vV  254 (345)
T PLN02750        175 LSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRSDGEWIPVKPIPDAFII  254 (345)
T ss_pred             HHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCceEEeecCCCeEEEccCCCCeEEE
Confidence            99999999999999888899999999999887778999999999999999999999999986446999999999999999


Q ss_pred             EechhHHHhhCCeeccccceeccCCCCCeeeeeeeeCCCCCceeecCccccCCCCCCCCCCcCHHHHHHHHHHhccccCC
Q 038785          251 NIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMMKPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLD  330 (356)
Q Consensus       251 nvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~~~e~~~~r~~~~~~~~~  330 (356)
                      |+||+||+||||+|+||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|++|+||+..|+...|..+.
T Consensus       255 NiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~~~~~~~  334 (345)
T PLN02750        255 NIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFASRNRSDYKKLE  334 (345)
T ss_pred             EhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHHHHhccccccc
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999998887


Q ss_pred             ccccccceee
Q 038785          331 VENLQIYHFK  340 (356)
Q Consensus       331 ~~~~~~~~~~  340 (356)
                      .++++|.||+
T Consensus       335 ~~~~~~~~~~  344 (345)
T PLN02750        335 VENIQIDHFK  344 (345)
T ss_pred             ccceeeeccc
Confidence            7888999886

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-34
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-34
1w9y_A319 The Structure Of Acc Oxidase Length = 319 9e-34
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-33
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-17
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-14
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-14
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-10
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 159/318 (50%), Gaps = 31/318 (9%)
Query: 14  IPLIDLSALSATSTNIKNPDSTISD-LVQQIGNACKNWGFFQVINHGVPFDKRRSIENAA 72
           +P IDL        NI++ D  I +  ++++  A  +WG   +INHG+P D    ++ A 
Sbjct: 47  VPTIDLK-------NIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAG 99
Query: 73  RKFFEQPLXXXXX-XXXXXXXLVGYYDTEHTKNVR---DWKEVFDFVVESPCLMPASPEP 128
            +FF   +              +  Y ++   N     +W++ F  +            P
Sbjct: 100 EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAY----------P 149
Query: 129 EDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALSLGLPANRFN---GFFK 185
           E+K      S WP  P +  EA  EYAK +  LA K+ + +++ LGL  +R     G  +
Sbjct: 150 EEKR---DLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLE 206
Query: 186 DQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIP 245
           +     ++N+YP CP P L LGV  H D  ALT +  + V GL++    +G+W   K +P
Sbjct: 207 ELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF--YEGKWVTAKCVP 264
Query: 246 NSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFN-PSHYTMMKPLDELINEQ 304
           +S +++IGD +++ SN  Y+++ HR +VN EK R+S  +    P    ++KPL E+++ +
Sbjct: 265 DSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVE 324
Query: 305 NPAKYRAYNWGKYFTSRL 322
           +PAK+    + ++   +L
Sbjct: 325 SPAKFPPRTFAQHIEHKL 342
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-132
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-129
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-116
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-116
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-107
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-97
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  381 bits (980), Expect = e-132
 Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 39/351 (11%)

Query: 1   EHRPKLSVTEAEG-------IPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFF 53
           E    ++    E        +P IDL  + +        +    + ++++  A  +WG  
Sbjct: 27  EELESINDVFLEEKKEDGPQVPTIDLKNIESDD------EKIRENCIEELKKASLDWGVM 80

Query: 54  QVINHGVPFDKRRSIENAARKFFEQPLEEKRKV-RRDEKKLVGYYDTEHTKN---VRDWK 109
            +INHG+P D    ++ A  +FF   +EEK K         +  Y ++   N     +W+
Sbjct: 81  HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWE 140

Query: 110 EVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELI 169
           + F  +          PE +        S WP  P +  EA  EYAK +  LA K+ + +
Sbjct: 141 DYFFHLA--------YPEEKRD-----LSIWPKTPSDYIEATSEYAKCLRLLATKVFKAL 187

Query: 170 ALSLGLPANRFNGFF---KDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVG 226
           ++ LGL  +R        ++     ++N+YP CP P L LGV  H D  ALT +  + V 
Sbjct: 188 SVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVP 247

Query: 227 GLEVKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILF 286
           GL++    +G+W   K +P+S +++IGD +++ SN  Y+++ HR +VN EK R+S  +  
Sbjct: 248 GLQLFY--EGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFC 305

Query: 287 NPSHYTMM-KPLDELINEQNPAKYRAYNWGKYFTSRLHSNLKKLDVENLQI 336
            P    ++ KPL E+++ ++PAK+    + ++   +L     K   E +  
Sbjct: 306 EPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF---GKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 95.3
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.56
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.2
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 90.1
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 89.25
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 89.2
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 86.58
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 83.91
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=4.8e-76  Score=557.57  Aligned_cols=296  Identities=24%  Similarity=0.428  Sum_probs=261.4

Q ss_pred             CCCCceEeCCCCCCCCCCCCCCCchHHHHHHHHHHHhhcccEEEEecCCCCHHHHHHHHHHHHHhhcCCHHHHhhhccCC
Q 038785           11 AEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDE   90 (356)
Q Consensus        11 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~   90 (356)
                      +.+||||||+.+.+ +         +++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus         4 ~~~iPvIDls~~~~-~---------~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~   73 (312)
T 3oox_A            4 TSAIDPVSFSLYAK-D---------FTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK   73 (312)
T ss_dssp             CCSSCCEETHHHHH-C---------HHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSG
T ss_pred             CCCCCeEEChHhcc-c---------HHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCC
Confidence            56899999998864 2         5789999999999999999999999999999999999999999999999998753


Q ss_pred             CCccccccc--CCC--CCCCCcccceeccccCCCCCCCCCCCcchhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 038785           91 KKLVGYYDT--EHT--KNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLI  166 (356)
Q Consensus        91 ~~~~GY~~~--~~~--~~~~d~~E~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~Ll  166 (356)
                      ...+||.+.  +..  .+..||+|.|+++...+...|      ... ...+|.||+.+|+||+++++|+++|.+|+.+||
T Consensus        74 ~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~------~~~-~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll  146 (312)
T 3oox_A           74 GGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHR------FRA-HMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVL  146 (312)
T ss_dssp             GGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCG------GGG-TSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccceecCCCCCCCceeeeEeecCCCcCCc------chh-ccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            467899754  322  246899999999764321111      011 135799999999999999999999999999999


Q ss_pred             HHHHHHcCCCccccchhccCcccceEEeecCCCCCCCCCCcccCccCCCCeeEEeeCCCCCeeEEecCCCceEEEeecCC
Q 038785          167 ELIALSLGLPANRFNGFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVKPIPN  246 (356)
Q Consensus       167 ~~la~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~~g~W~~v~p~~g  246 (356)
                      ++|+++||+++++|.+.+.++.+.||++||||++.++..+|+++|||+|+||||+||+++||||+.+ +|+|++|+|.||
T Consensus       147 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~-~g~W~~V~p~pg  225 (312)
T 3oox_A          147 EAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDR-DGQWLPINPPPG  225 (312)
T ss_dssp             HHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECT-TSCEEECCCCSS
T ss_pred             HHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECC-CCcEEECCCCCC
Confidence            9999999999999999998888999999999998765459999999999999999999999999987 499999999999


Q ss_pred             eEEEEechhHHHhhCCeeccccceeccCC----CCCeeeeeeeeCCCCCceeecCccccCCCCCCCCC-CcCHHHHHHHH
Q 038785          247 SYIINIGDCIQVWSNDAYETVEHRVVVNS----EKERLSIPILFNPSHYTMMKPLDELINEQNPAKYR-AYNWGKYFTSR  321 (356)
Q Consensus       247 ~lvVnvGd~L~~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~-~~~~~e~~~~r  321 (356)
                      ++||||||+||+||||+||||+|||+.++    ..+|||++||++|+.|++|.|+++++++++|++|+ +++++||+..|
T Consensus       226 ~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r  305 (312)
T 3oox_A          226 CLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQR  305 (312)
T ss_dssp             CEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHH
T ss_pred             eEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHH
Confidence            99999999999999999999999998763    46799999999999999999999999999999999 99999999999


Q ss_pred             HHh
Q 038785          322 LHS  324 (356)
Q Consensus       322 ~~~  324 (356)
                      ++.
T Consensus       306 ~~~  308 (312)
T 3oox_A          306 LRE  308 (312)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 356
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 6e-67
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-64
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 4e-58
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-51
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  212 bits (541), Expect = 6e-67
 Identities = 91/334 (27%), Positives = 160/334 (47%), Gaps = 30/334 (8%)

Query: 1   EHRPKLSVTEAEG-------IPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFF 53
           E    ++    E        +P IDL  + +      + +    + ++++  A  +WG  
Sbjct: 26  EELESINDVFLEEKKEDGPQVPTIDLKNIES------DDEKIRENCIEELKKASLDWGVM 79

Query: 54  QVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRDEK-KLVGYYDTEHTKNVRDWKEVF 112
            +INHG+P D    ++ A  +FF   +EEK K   D+    +  Y ++   N     E  
Sbjct: 80  HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWE 139

Query: 113 DFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKLIELIALS 172
           D+                       S WP  P +  EA  EYAK +  LA K+ + +++ 
Sbjct: 140 DYFFHLAYPEEKRD----------LSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 189

Query: 173 LGLPANRFN---GFFKDQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLE 229
           LGL  +R     G  ++     ++N+YP CP P L LGV  H D  ALT +  + V GL+
Sbjct: 190 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ 249

Query: 230 VKKKSDGEWARVKPIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPS 289
           +    +G+W   K +P+S +++IGD +++ SN  Y+++ HR +VN EK R+S  +   P 
Sbjct: 250 LFY--EGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 307

Query: 290 HYTMM-KPLDELINEQNPAKYRAYNWGKYFTSRL 322
              ++ KPL E+++ ++PAK+    + ++   +L
Sbjct: 308 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL 341
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 94.06
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.74
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.8e-71  Score=529.12  Aligned_cols=293  Identities=31%  Similarity=0.608  Sum_probs=254.6

Q ss_pred             CCCCCceEeCCCCCCCCCCCCCCCchHHHHHHHHHHHhhcccEEEEecCCCCHHHHHHHHHHHHHhhcCCHHHHhhhccC
Q 038785           10 EAEGIPLIDLSALSATSTNIKNPDSTISDLVQQIGNACKNWGFFQVINHGVPFDKRRSIENAARKFFEQPLEEKRKVRRD   89 (356)
Q Consensus        10 ~~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~   89 (356)
                      ...+||||||+.+.+++      +..|++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus        42 ~~~~IPvIDls~l~~~d------~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~  115 (349)
T d1gp6a_          42 DGPQVPTIDLKNIESDD------EKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYAND  115 (349)
T ss_dssp             CSCCCCEEECTTTTCSC------HHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCB
T ss_pred             CCCCcCeEEChhcCCCC------HHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcc
Confidence            45689999999998766      446889999999999999999999999999999999999999999999999999764


Q ss_pred             CC--Cccccccc--CCCCCCCCcccceeccccCCCCCCCCCCCcchhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 038785           90 EK--KLVGYYDT--EHTKNVRDWKEVFDFVVESPCLMPASPEPEDKEVAETYSQWPDYPPELREAFEEYAKEVEKLAYKL  165 (356)
Q Consensus        90 ~~--~~~GY~~~--~~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~L  165 (356)
                      ..  ...||...  +...+..++.+.+......             .-...+|.||+..+.|++.+.+|+++|.+++.+|
T Consensus       116 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~l  182 (349)
T d1gp6a_         116 QATGKIQGYGSKLANNASGQLEWEDYFFHLAYP-------------EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV  182 (349)
T ss_dssp             GGGTBCSEEECCCCCSTTCCCCSCEEEEEEEES-------------GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCccccccccccccccccchhhhhcccccc-------------cccccccccccccchHHHHHHHHHHHHHHHHHhh
Confidence            32  22333322  3333445555544322111             0013578999999999999999999999999999


Q ss_pred             HHHHHHHcCCCccccchhcc---CcccceEEeecCCCCCCCCCCcccCccCCCCeeEEeeCCCCCeeEEecCCCceEEEe
Q 038785          166 IELIALSLGLPANRFNGFFK---DQTTFARLNHYPPCPAPHLTLGVGRHKDSGALTILAQDDVGGLEVKKKSDGEWARVK  242 (356)
Q Consensus       166 l~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~~g~W~~v~  242 (356)
                      +++++++||+++++|.+.+.   .+.+.||++||||++.+...+|+++|||+|+||||+|+.++||||+.  +|+|++|+
T Consensus       183 l~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~~--~g~W~~V~  260 (349)
T d1gp6a_         183 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--EGKWVTAK  260 (349)
T ss_dssp             HHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEE--TTEEEECC
T ss_pred             hHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCcceeeec--CCceEEcc
Confidence            99999999999999987763   35678999999999988889999999999999999999999999986  59999999


Q ss_pred             ecCCeEEEEechhHHHhhCCeeccccceeccCCCCCeeeeeeeeCCCCCcee-ecCccccCCCCCCCCCCcCHHHHHHHH
Q 038785          243 PIPNSYIINIGDCIQVWSNDAYETVEHRVVVNSEKERLSIPILFNPSHYTMM-KPLDELINEQNPAKYRAYNWGKYFTSR  321 (356)
Q Consensus       243 p~~g~lvVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~pl~~~~~~~~p~~y~~~~~~e~~~~r  321 (356)
                      |.+|++|||+||+||+||||+||||+|||+.+++.+||||+||++|+.|++| .|+++++++++|++|+|++++||++.|
T Consensus       261 p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~r  340 (349)
T d1gp6a_         261 CVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHK  340 (349)
T ss_dssp             CCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHH
T ss_pred             CCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHH
Confidence            9999999999999999999999999999999988999999999999999865 899999999999999999999999999


Q ss_pred             HH
Q 038785          322 LH  323 (356)
Q Consensus       322 ~~  323 (356)
                      +.
T Consensus       341 l~  342 (349)
T d1gp6a_         341 LF  342 (349)
T ss_dssp             HH
T ss_pred             Hh
Confidence            84
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure