Citrus Sinensis ID: 038792

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSASALLFKSQSFMVALVLSMTAQILCVSNVI
cccHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccHHHccccccccccccHHHHHHHHcccccccHHcccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccc
****LISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVN*******************LLFKSQSFMVALVLSMTAQILCVSNVI
xxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSASALLFKSQSFMVALVLSMTAQILCVSNVI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Lipid transfer-like protein VAS Promotes the number of phloem (pro)cambial and pericycle cells.probableQ9FFY3

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ALG, chain A
Confidence level:confident
Coverage over the Query: 30-103
View the alignment between query and template
View the model in PyMOL