Citrus Sinensis ID: 038792

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSASALLFKSQSFMVALVLSMTAQILCVSNVI
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccHHHHcccccccccccHHHHHHHHcccccccHHcccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHcccccccccHHcHHHHHHHHcccHHHHHHHccccccccccccccHHHHHHcHHHccccccccccccccccccccccccccHccHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MEMKLISSCGIALMVLLAMLSVegtwaqstyclnrlapclrylngsrdvpdsccdplksvikdnpeclcsmisnrgsrraeeaginvsaaqelpgkcgqrvnplgclrgspgsaqdssasaLLFKSQSFMVALVLSMTAQILCVSNVI
Flexible Loop (DISEMBL)
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLksvikdnpecLCSMISNRGSRRAEEAGINVsaaqelpgkcgQRVNPLGCLRGSPGSAQDSSASALLFKSQSFMVALVLSMTAQILCVSNVI
Low Complexity Region (SEG)
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSASALLFKSQSFMVALVLSMTAQILCVSNVI
Disordered region (IsUnstruct)
****LISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMI*************************************************LLFKSQSFMVALVLSMTAQILCVS***
Disordered Region (DISOPRED)
*********GIALMVLLAMLSV*********CLNRLAPCLRYL**********CDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVN*********************************SMTAQILCVSNVI
Disordered Region (DISEMBL)
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRG**********SALLFKSQSFMVALVLSMTAQILCVSNVI
Disordered Region (DISPRO)
*EMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPL*C***************LLFKSQSFMVALVLSMTAQILCVSNVI
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSASALLFKSQSFMVALVLSMTAQILCVSNVI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
Q9FFY3	151	Lipid transfer-like prote	yes	no	0.952	0.933	0.472	3e-30

>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 5/146 (3%)

Query: 1   MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSV 60
           M MK  S     +++L+A  S      QS  CLN+LAPCL YLNG+++VP  CC+PLKSV
Sbjct: 3   MGMKFFSF--YVVLLLVAASSGMRINGQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSV 60

Query: 61  IKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSAS 120
           I++NPECLC MISNR S +AE AGI+V+ AQ LP +CG+ VNP+ CL  S G + +S  S
Sbjct: 61  IRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRS 120

Query: 121 ALL---FKSQSFMVALVLSMTAQILC 143
           + +   F    +M  L ++ T    C
Sbjct: 121 SSIGNTFSQSYWMTTLAIAATVLSYC 146

Promotes the number of phloem (pro)cambial and pericycle cells.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
296082244	150	unnamed protein product [Vitis vinifera]	0.945	0.933	0.569	1e-38
255543483	148	lipid binding protein, putative [Ricinus	0.932	0.932	0.542	3e-37
356559508	142	PREDICTED: lipid transfer-like protein V	0.939	0.978	0.520	2e-33
224121908	142	predicted protein [Populus trichocarpa]	0.925	0.964	0.517	9e-33
15240748	151	Lipid transfer-like protein VAS [Arabido	0.952	0.933	0.472	2e-28
297811503	150	hypothetical protein ARALYDRAFT_488216 [	0.581	0.573	0.651	5e-27
449501313	147	PREDICTED: lipid transfer-like protein V	0.898	0.904	0.485	2e-26
449455760	147	PREDICTED: lipid transfer-like protein V	0.898	0.904	0.485	2e-26
294464420	173	unknown [Picea sitchensis]	0.695	0.595	0.364	3e-09
223029869	147	protease inhibitor/seed storage/lipid tr	0.608	0.612	0.357	7e-09

>gi|296082244|emb|CBI21249.3| unnamed protein product [Vitis vinifera]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/144 (56%), Positives = 103/144 (71%), Gaps = 4/144 (2%)

Query: 1   MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSV 60
           ME+K  + CGIA++VL+ ++  EG WAQ + CLN LAPCL YLNG+RD PDSCCDPLKSV
Sbjct: 1   MELKFWACCGIAVIVLVTLVP-EG-WAQDSSCLNELAPCLNYLNGTRDPPDSCCDPLKSV 58

Query: 61  IKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSAS 120
           IK  PECLCSMIS +G+ +A +AGINV+ AQ+LPG+CGQ VNPL CL   P S      S
Sbjct: 59  IKSKPECLCSMISTKGTSQARQAGINVTEAQQLPGRCGQHVNPLSCLSSPPNSKDSVPNS 118

Query: 121 ALLFKSQSFMVALV--LSMTAQIL 142
             +F S S ++ +V   SM+  IL
Sbjct: 119 GSIFWSPSLIMKVVAAFSMSIHIL 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543483|ref|XP_002512804.1| lipid binding protein, putative [Ricinus communis] gi|223547815|gb|EEF49307.1| lipid binding protein, putative [Ricinus communis]

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 102/142 (71%), Gaps = 4/142 (2%)

Query: 7   SSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPE 66
           S CGI  +VL+  + V+    Q T C+N+L PCL YLNG++DVPD+CC+PL++VIK +PE
Sbjct: 7   SRCGIVALVLVVAILVQKGNGQDTSCINQLVPCLNYLNGTKDVPDTCCEPLENVIKSDPE 66

Query: 67  CLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQ--DSSASALLF 124
           CLCSMISN GS +AE+AGINV+ AQ+LPG+CG  VNP+ C+ GSP +    D+S+  LLF
Sbjct: 67  CLCSMISNEGSDQAEQAGINVTEAQQLPGRCGLHVNPISCITGSPNTKTSVDNSSGLLLF 126

Query: 125 KSQSFMV--ALVLSMTAQILCV 144
            S S M+  A   S+  QI CV
Sbjct: 127 PSWSMMMVAAAAFSIVVQIFCV 148

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559508|ref|XP_003548041.1| PREDICTED: lipid transfer-like protein VAS-like [Glycine max]

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/144 (52%), Positives = 102/144 (70%), Gaps = 5/144 (3%)

Query: 1   MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSV 60
           ME  L + C IA +VLL  +   G+ AQ + CLN+L+PCL YLNG+ D PDSCC+PLKSV
Sbjct: 1   METILRALCWIAFLVLLTCIP-RGS-AQDSSCLNKLSPCLNYLNGTEDPPDSCCEPLKSV 58

Query: 61  IKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPG---SAQDS 117
           I+ + ECLCS++SNRG+R+AE+AGIN++ AQ+LPG+CGQ VNPL CL  SPG   S ++S
Sbjct: 59  IESDAECLCSLVSNRGTRQAEQAGININEAQQLPGRCGQHVNPLSCLTNSPGPTNSDRNS 118

Query: 118 SASALLFKSQSFMVALVLSMTAQI 141
           +   +   S   M+ L  S+ A +
Sbjct: 119 ATKLVHVSSGIVMMILFFSIIAHV 142

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121908|ref|XP_002330683.1| predicted protein [Populus trichocarpa] gi|222872287|gb|EEF09418.1| predicted protein [Populus trichocarpa]

 Score =  144 bits (364), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/145 (51%), Positives = 99/145 (68%), Gaps = 8/145 (5%)

Query: 3   MKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIK 62
           M  + SC + +  L+  + ++  +AQ T CLN+L PCL YLNG++DVPD+CCDPLK+VIK
Sbjct: 1   MDKLLSCFLGISSLMLFVLLQDGYAQDTSCLNQLVPCLSYLNGTKDVPDTCCDPLKTVIK 60

Query: 63  DNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQ-----DS 117
            NP+CLC++ SN+GS    +AGINV+ AQELPG+CG  VNPL CL GS  S       D+
Sbjct: 61  SNPKCLCNLASNQGSN---QAGINVTEAQELPGRCGLHVNPLSCLTGSNNSPNSKNSVDN 117

Query: 118 SASALLFKSQSFMVALVLSMTAQIL 142
           SAS  L  S S +VA  L+ T+Q L
Sbjct: 118 SASIFLLPSWSLIVATTLTFTSQFL 142

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240748|ref|NP_196894.1| Lipid transfer-like protein VAS [Arabidopsis thaliana] gi|75170324|sp|Q9FFY3.1|VAS_ARATH RecName: Full=Lipid transfer-like protein VAS; Flags: Precursor gi|18390051|gb|AAL68835.1|AF463514_1 lipid transfer protein-like VAS [Arabidopsis thaliana] gi|10177656|dbj|BAB11118.1| unnamed protein product [Arabidopsis thaliana] gi|50253552|gb|AAT71978.1| At5g13900 [Arabidopsis thaliana] gi|51968626|dbj|BAD43005.1| predicted GPI-anchored protein [Arabidopsis thaliana] gi|332004574|gb|AED91957.1| Lipid transfer-like protein VAS [Arabidopsis thaliana]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 5/146 (3%)

Query: 1   MEMKLISSCGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSV 60
           M MK  S     +++L+A  S      QS  CLN+LAPCL YLNG+++VP  CC+PLKSV
Sbjct: 3   MGMKFFSF--YVVLLLVAASSGMRINGQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSV 60

Query: 61  IKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSAS 120
           I++NPECLC MISNR S +AE AGI+V+ AQ LP +CG+ VNP+ CL  S G + +S  S
Sbjct: 61  IRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRS 120

Query: 121 ALL---FKSQSFMVALVLSMTAQILC 143
           + +   F    +M  L ++ T    C
Sbjct: 121 SSIGNTFSQSYWMTTLAIAATVLSYC 146

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811503|ref|XP_002873635.1| hypothetical protein ARALYDRAFT_488216 [Arabidopsis lyrata subsp. lyrata] gi|297319472|gb|EFH49894.1| hypothetical protein ARALYDRAFT_488216 [Arabidopsis lyrata subsp. lyrata]

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 69/86 (80%)

Query: 27  AQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGIN 86
            QS  CLN+LAPCL YLNG+++VP  CC+PLKSVI++NPECLC MISNRGS +AE AGI+
Sbjct: 29  GQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSVIRNNPECLCRMISNRGSSQAERAGID 88

Query: 87  VSAAQELPGKCGQRVNPLGCLRGSPG 112
           V+ AQ LP +CG+ VNP+ CL  S G
Sbjct: 89  VNDAQMLPARCGEHVNPIACLTRSRG 114

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449501313|ref|XP_004161335.1| PREDICTED: lipid transfer-like protein VAS-like [Cucumis sativus]

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 88/136 (64%), Gaps = 3/136 (2%)

Query: 3   MKLISSCGIALMVLLAMLSVEGTWAQS--TYCLNRLAPCLRYLNGSRDVPDSCCDPLKSV 60
           MK I +  + +MVLL      GT AQS  T C+N L PCL Y+NG+RD P+SCC+PL+S+
Sbjct: 8   MKKIVAAAV-VMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSI 66

Query: 61  IKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSAS 120
           I  NPECLC +IS  GS RAE AGI+++ AQ LP +CG+ VNPL CL  +  S   S + 
Sbjct: 67  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSL 126

Query: 121 ALLFKSQSFMVALVLS 136
           AL   + +    L++S
Sbjct: 127 ALQVITLAISTKLIMS 142

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455760|ref|XP_004145619.1| PREDICTED: lipid transfer-like protein VAS-like [Cucumis sativus]

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 88/136 (64%), Gaps = 3/136 (2%)

Query: 3   MKLISSCGIALMVLLAMLSVEGTWAQS--TYCLNRLAPCLRYLNGSRDVPDSCCDPLKSV 60
           MK I +  + +MVLL      GT AQS  T C+N L PCL Y+NG+RD P+SCC+PL+S+
Sbjct: 8   MKKIVAAAV-VMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSI 66

Query: 61  IKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSAS 120
           I  NPECLC +IS  GS RAE AGI+++ AQ LP +CG+ VNPL CL  +  S   S + 
Sbjct: 67  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSL 126

Query: 121 ALLFKSQSFMVALVLS 136
           AL   + +    L++S
Sbjct: 127 ALQVITLAISTKLIMS 142

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294464420|gb|ADE77722.1| unknown [Picea sitchensis]

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 4/107 (3%)

Query: 1   MEMKLISSCGIALMVLLAMLS-VEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKS 59
           M+ + +   GI  MVL++ML  V    + ST CL+ L+ C  YLN +     SCC  L S
Sbjct: 1   MDSRRLKRSGIVCMVLMSMLMLVVCEDSDSTACLSSLSSCAPYLNATTKPDSSCCSALIS 60

Query: 60  VIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGC 106
           VI  + +CLC++++   S   +E G+NV+ A ++P +CG+ V+   C
Sbjct: 61  VIDKDSQCLCNLLN---SNTVKELGVNVTQAMKMPAECGKNVSATQC 104

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223029869|gb|ACM78616.1| protease inhibitor/seed storage/lipid transfer protein family protein [Tamarix hispida]

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 11  IALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCS 70
           +A+ +  A+++       ST C + L PC  +LN +   P SCCDPLK  I+   +CLC+
Sbjct: 8   VAMALAGALIATTSEAQASTDCASSLTPCATFLNATTKPPSSCCDPLKKAIETEKDCLCN 67

Query: 71  MISNRGSRRAEEAGINVSAAQELPGKC---GQRVN 102
           + +  G  ++   GINV+ A +LP KC   G  +N
Sbjct: 68  IFNTPGLLKS--FGINVTEATQLPRKCEIPGTSIN 100

Source: Tamarix hispida

Species: Tamarix hispida

Genus: Tamarix

Family: Tamaricaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
TAIR|locus:2159053	151	AT5G13900 [Arabidopsis thalian	0.945	0.927	0.482	1.1e-30
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.716	0.623	0.338	8.2e-12
TAIR|locus:2035052	147	AT1G73560 [Arabidopsis thalian	0.891	0.897	0.305	1.2e-10
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.722	0.584	0.352	5.2e-10
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.662	0.628	0.311	3.6e-09
TAIR|locus:2065634	115	AT2G37870 [Arabidopsis thalian	0.675	0.869	0.339	5.9e-09
TAIR|locus:1006230669	171	AT1G03103 "AT1G03103" [Arabido	0.506	0.438	0.4	1.2e-08
TAIR|locus:2031551	193	AT1G73890 [Arabidopsis thalian	0.736	0.564	0.304	4.2e-08
TAIR|locus:2014074	180	AT1G18280 [Arabidopsis thalian	0.621	0.511	0.284	1.1e-07
TAIR|locus:2026257	150	AT1G62790 "AT1G62790" [Arabido	0.655	0.646	0.277	3.8e-07

TAIR|locus:2159053 AT5G13900 [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 71/147 (48%), Positives = 96/147 (65%)

Query:     1 MEMKLISSCGIALMVLLAM-LSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKS 59
             M MK  S   + L+V  +  + + G   QS  CLN+LAPCL YLNG+++VP  CC+PLKS
Sbjct:     3 MGMKFFSFYVVLLLVAASSGMRING---QSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKS 59

Query:    60 VIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSA 119
             VI++NPECLC MISNR S +AE AGI+V+ AQ LP +CG+ VNP+ CL  S G + +S  
Sbjct:    60 VIRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDR 119

Query:   120 SALLFK--SQSF-MVALVLSMTAQILC 143
             S+ +    SQS+ M  L ++ T    C
Sbjct:   120 SSSIGNTFSQSYWMTTLAIAATVLSYC 146

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 40/118 (33%), Positives = 62/118 (52%)

Query:    11 IALMVLLAMLSVEGTWAQSTYCLNRL---APCLRYLNGSRDVPDS-CCDPLKSVIKDNPE 66
             + L V +A++S     AQS+ C N L   +PCL Y+ G+   P+  CC+ L  V++ +P+
Sbjct:     8 VFLTVFMAVMSSTMVSAQSS-CTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPD 66

Query:    67 CLCSMISNRGSRRAEEAGINVSAAQEL--PGKCGQRVNPLG-CLRGSPGSAQDSSASA 121
             CLC +++  GS    + GINV+  Q L  P  C  +  P+  C  G  G    S + A
Sbjct:    67 CLCQVLNGGGS----QLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPA 120

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2035052 AT1G73560 [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 44/144 (30%), Positives = 69/144 (47%)

Query:     1 MEMKLISSCGIALMVLLAM-LSVEGTWAQSTYCLNRLAPCLRYLNG-SRDVPDSCCDPLK 58
             ME+    +  +A++VL ++  + +G   Q T CL +L PC  Y++  +   P SCC P+K
Sbjct:     1 MEINKFLAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMK 60

Query:    59 SVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLR-------GSP 111
              +++ +  CLC   +N    +A    +    A  LP  CG   +   C +        SP
Sbjct:    61 EIVEKDAPCLCIAFNNPEVLKA--LNLTKENALLLPKACGVNPDVSLCSKIATPSPIASP 118

Query:   112 GSAQD-SSASALLFKSQSFMVALV 134
             GS    SSAS + F   SF+ A V
Sbjct:   119 GSTNGTSSASTISFNRFSFLSAFV 142

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 43/122 (35%), Positives = 63/122 (51%)

Query:     8 SCGIALMVLLAML-SVEGTWAQ-STYC---LNRLAPCLRYLNGSRDVPDS-CCDPLKSVI 61
             S  I  + L+A L SV  T AQ S+ C   L  L+PCL Y+ G+   P   CC  L SVI
Sbjct:     6 SYAITFVALVAALWSV--TKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVI 63

Query:    62 KDNPECLCSMISNRGSRRAEEAGINVSAAQ--ELPGKCGQRVNPLGCLRGSPG-SAQDSS 118
             K +P+C+CS +++         G+N++  Q  +LP  C  +  PL     + G +AQ  +
Sbjct:    64 KSSPQCICSAVNSP----IPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPA 119

Query:   119 AS 120
              S
Sbjct:   120 PS 121

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 33/106 (31%), Positives = 52/106 (49%)

Query:     9 CGIALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDS-CCDPLKSVIKDNPEC 67
             C I  + L+ ++S+    +  T  L  +APCL ++  +  +P   CC+ L  V++ + EC
Sbjct:     6 CLILFIALMRVMSIVSAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSEC 65

Query:    68 LCSMISNRGSRRAEEAGINVSAAQEL--PGKCGQRVNPLG-CLRGS 110
             LC ++   GS    + GINV+  Q L  P  C     P   C  GS
Sbjct:    66 LCQVLDGGGS----QLGINVNETQALALPKACHVETPPASRCHSGS 107

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2065634 AT2G37870 [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 37/109 (33%), Positives = 56/109 (51%)

Query:     3 MKLISSCGIALM-VLLAMLSVEGTWAQSTYCLNR----LAPCLRYLNGSRD-VPDSCCDP 56
             MK      +ALM +L+++ SVE         +N+    L+PCL      R  VP  CC  
Sbjct:     1 MKCCKFVAVALMSLLISLASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAK 60

Query:    57 LKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLG 105
             + ++I+ NP CLC+++    S  A++AGIN   A  +P +C  R  P G
Sbjct:    61 VGALIRTNPRCLCAVML---SPLAKKAGINPGIAIGVPKRCNIRNRPAG 106

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:1006230669 AT1G03103 "AT1G03103" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 32/80 (40%), Positives = 42/80 (52%)

Query:    33 LNRLAPCLRYLNGSRDVPD-SCCDPLKSVIKDNPECLCSMI-SNRGSRRAEEAGINVSAA 90
             L  L+PCL YLNG    P  SCC    +V++ +PECLCS++ SN  S    +   N + A
Sbjct:    29 LTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFK--FNRTLA 86

Query:    91 QELPGKCG-QRVNPLGCLRG 109
               LP  C  Q  +P  C  G
Sbjct:    87 LNLPTACNVQTPSPSLCNTG 106

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2031551 AT1G73890 [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 35/115 (30%), Positives = 50/115 (43%)

Query:    11 IALMVLLAMLSVEGTWAQ-STYCLNRL---APCLRYLNGSRDVP-DSCCDPLKSVIKDNP 65
             I L++ L+   +    AQ    C +RL   APC  ++ G   +P   CCD L  +     
Sbjct:     8 ITLLISLSAFFLRMVLAQVPATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEA 67

Query:    66 ECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSAS 120
              CLC  ++N  S  +    IN + A +LP  C    N   C    PG A   S+S
Sbjct:    68 TCLCLFLNNT-STLSPAFPINQTLALQLPPLCNIPANSSTCSSSFPGEAPSDSSS 121

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2014074 AT1G18280 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 27/95 (28%), Positives = 47/95 (49%)

Query:    27 AQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGIN 86
             A S  C+ +L PC  YL+ +   P +CC PL  ++  +  CLC++ +N    ++    + 
Sbjct:    36 AHSLPCIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKS--LNLT 93

Query:    87 VSAAQELPGKCGQRVNPLGCLRGSPGSAQDSSASA 121
                A +LP  CG + +   C + S G+   S+  A
Sbjct:    94 KENALDLPKACGAKADVSLC-KTSAGTNSSSTPPA 127

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2026257 AT1G62790 "AT1G62790" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 28/101 (27%), Positives = 48/101 (47%)

Query:    12 ALMVLLAMLSVEGTWAQSTYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSM 71
             A M ++A+L V    AQ T C+++L PC   LN +      CCD +K  ++    CLC++
Sbjct:    10 AAMTVMALLLVPTIEAQ-TECVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTI 68

Query:    72 ISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCL-RGSP 111
              ++ G     +  +    A  L  +C    +   C  +G+P
Sbjct:    69 YTSPGL--LAQFNVTTEKALGLSRRCNVTTDLSACTAKGAP 107

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FFY3	VAS_ARATH	No assigned EC number	0.4726	0.9527	0.9337	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_scaffold_142000017 hypothetical protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (142 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	148
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	2e-12
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	1e-11
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	2e-04
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	3e-04

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 58.2 bits (141), Expect = 2e-12
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 36 LAPCLRYLNGSRD-VPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELP 94
          LAPCL YL G     P  CC  LKSV+K +P+CLC+ ++  G+        N + A  LP
Sbjct: 1  LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLG--LKNATRALALP 58

Query: 95 GKCG 98
            CG
Sbjct: 59 AACG 62

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 57.1 bits (138), Expect = 1e-11
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 5/97 (5%)

Query: 12  ALMVLLAMLSVEGTWAQSTYCLNRLAPCLR--YLNGSRDVPDSCCDPLKSVIKDNPECLC 69
             ++L +  +     A +  C + L PCL   Y+NG+     +CC  LK+ +K +  CLC
Sbjct: 2   LAVLLASAAAAPPAPASAASCADSLLPCLGYCYVNGTAAPSPACCAALKAAVKADVPCLC 61

Query: 70  SMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGC 106
            ++    S  A   GIN++ A  LP  CG    P  C
Sbjct: 62  DLV---TSPLAAGFGINLTRAVALPKACGLTSPPSKC 95

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 33  LNRLAPCLRYLNG---SRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSA 89
           L +LAPCL YL G          CC  L+ +   + +C C  +        E  G+N   
Sbjct: 5   LLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGLNAQN 62

Query: 90  AQELPGKCGQRVNPLGC 106
           A  LP  CG       C
Sbjct: 63  AASLPSACGVPPPYTDC 79

Length = 79

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 36.8 bits (85), Expect = 3e-04
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 33  LNRLAPCLRYLNGSRDVP-DSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQ 91
           L +LAPC  YL G   VP   CC  L+ +     +C C+ I           GIN  AA 
Sbjct: 5   LLKLAPCAGYLQGGCQVPSQQCCSQLRQL---QAQCRCTAIRAIVLGIE---GINPQAAA 58

Query: 92  ELPGKCGQRVNP 103
            LP  CG  V  
Sbjct: 59  SLPSMCGVNVPY 70

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.64
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.45
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.44
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.43
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.37
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	98.88
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.4
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	91.1
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	90.42
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	81.69

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.64  E-value=1.7e-17  Score=115.53  Aligned_cols=80  Identities=41%  Similarity=0.835  Sum_probs=51.8

Q ss_pred             cccccccchhhccccc---hhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCC
Q 038792           24 GTWAQSTYCLNRLAPC---LRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQR  100 (148)
Q Consensus        24 ~~a~~~~~C~~~L~pC---l~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~  100 (148)
                      ..+....+|..+|.+|   +.|++++.+|++.||+++|++.+.++.|+|+++++..   ...++||.+|+..||++||++
T Consensus        14 ~~~~~~~~c~~~l~~c~~~~~~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~---~~~~~in~~~a~~Lp~~Cg~~   90 (96)
T PF14368_consen   14 PAAACCCSCANSLLPCCPCLCYVTGGPAPSAACCSALKSVVQADPPCLCQLLNSPG---APGFGINVTRALALPAACGVP   90 (96)
T ss_dssp             ----BTTB-HCCCCHH--HHHHHCC-----HHHHHHHCC----HCCHHHCCCC-CC---HCHHCCTCHHHHHHHHHCTSS
T ss_pred             cCCCCcchhHHHHhccccchhccCCCCCCCHHHHHHHHHhccCCCCCHHHhcCccc---cccCCcCHHHHHHHHHHcCCC
Confidence            3444556787788888   7888877789999999999998888999999888753   234789999999999999999


Q ss_pred             CCCCCC
Q 038792          101 VNPLGC  106 (148)
Q Consensus       101 ~p~~~C  106 (148)
                      .|++.|
T Consensus        91 ~~~~~C   96 (96)
T PF14368_consen   91 VPPSKC   96 (96)
T ss_dssp             -S----
T ss_pred             CCCCCC
Confidence            987555

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.45  E-value=2.9e-14  Score=92.85  Aligned_cols=61  Identities=46%  Similarity=1.011  Sum_probs=51.9

Q ss_pred             cccchhhhcCC-CCCCccchhhhhhccCCCCccccccccCccccccccCCC-CHHHHhhccccCCC
Q 038792           36 LAPCLRYLNGS-RDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGI-NVSAAQELPGKCGQ   99 (148)
Q Consensus        36 L~pCl~yv~g~-~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~i-n~~~a~~LP~~Cgv   99 (148)
                      |.||++|++|+ .+|++.||++++++.+.++.|+|+++++...   ...++ |.+++.+||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~---~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGA---SLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccc---cccCcccHHHHHhchHhcCC
Confidence            57999999987 4788999999999998889999999987632   22345 79999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.44  E-value=4.3e-14  Score=94.25  Aligned_cols=63  Identities=29%  Similarity=0.645  Sum_probs=53.5

Q ss_pred             hh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCC
Q 038792           32 CL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVN  102 (148)
Q Consensus        32 C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p  102 (148)
                      |+ .+|.+|++|++++.+||.+||+.+|+    +..|||.|++++..   +. .||.++|++||++||+++|
T Consensus         1 c~~~~L~~C~~ai~~~~~Ps~~CC~~Lk~----~~~CLC~y~~~p~l---~~-~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           1 CNPTQLSPCLPAILGGSPPSAACCAKLKE----QQSCLCQYAKNPSL---KQ-YVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             CChhhcccCHHHHhCCCCCCHHHHHHHhc----CCCCeeeeecCccH---Hh-hcCcHHHHHHHHHcCCCCC
Confidence            44 57999999999888899999999998    35899999888642   23 4999999999999999986

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.43  E-value=6.1e-14  Score=94.68  Aligned_cols=65  Identities=31%  Similarity=0.641  Sum_probs=52.2

Q ss_pred             hccccchhhhcCCC---CCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCCCCC
Q 038792           34 NRLAPCLRYLNGSR---DVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGC  106 (148)
Q Consensus        34 ~~L~pCl~yv~g~~---~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~~~C  106 (148)
                      ..|.||++|+++++   +|++.||+++|++   +..|+|.+++...     ...||.++|.+||++||+++|++.|
T Consensus         6 ~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~~-----~~~i~~~~a~~Lp~~Cgv~~p~~~C   73 (73)
T cd04660           6 DLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSLV-----LQIIDPDKAVYLPAKCGLPLPPSSC   73 (73)
T ss_pred             HHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCCc-----ccccCHHHHHHHHHHcCCCCCCCCC
Confidence            46889999999765   4778999999985   4569998766431     2359999999999999999987445

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.37  E-value=2.4e-13  Score=94.56  Aligned_cols=69  Identities=33%  Similarity=0.666  Sum_probs=53.3

Q ss_pred             chh---hccccchhhhcCCC-CCCccchhhhhhccCC-----CCccccccccCccccccccC-CCCHHHHhhccccCCCC
Q 038792           31 YCL---NRLAPCLRYLNGSR-DVPDSCCDPLKSVIKD-----NPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCGQR  100 (148)
Q Consensus        31 ~C~---~~L~pCl~yv~g~~-~P~~~CC~~lk~l~~~-----~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cgv~  100 (148)
                      +|.   ..|.||++|++|+. .|+++||++++++++.     +..|+|..+++..    ..+ +||.+||.+||++||++
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~----~~~~~i~~~~a~~LP~~C~v~   77 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAA----AGISGLNPGRAAGLPGKCGVS   77 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccc----cccCCCCHHHHHhChHhcccC
Confidence            465   56899999999865 7889999999998753     3356665556531    234 49999999999999999


Q ss_pred             CCC
Q 038792          101 VNP  103 (148)
Q Consensus       101 ~p~  103 (148)
                      .+.
T Consensus        78 ~~~   80 (89)
T cd01960          78 IPY   80 (89)
T ss_pred             CCC
Confidence            765

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=98.88  E-value=1.4e-09  Score=71.62  Aligned_cols=67  Identities=31%  Similarity=0.686  Sum_probs=51.6

Q ss_pred             ccccchhhhcCC---CCCCccchhhhhhccCCCCccccccccCccccccccC---CCCHHHHhhccccCCCCCCCCCC
Q 038792           35 RLAPCLRYLNGS---RDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEA---GINVSAAQELPGKCGQRVNPLGC  106 (148)
Q Consensus        35 ~L~pCl~yv~g~---~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~---~in~~~a~~LP~~Cgv~~p~~~C  106 (148)
                      ++.+|++|+++.   ..|+..||++++++.  ++.|+|.+++.....   ..   .++..++.+||+.||+..+...|
T Consensus         7 ~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~---~~~~~~~~~~~a~~lp~~C~~~~~~~~C   79 (79)
T smart00499        7 QLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLG---ILEIPGVNAQNAASLPSACGVPPPYTDC   79 (79)
T ss_pred             hHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhccccc---ccchhhhhHHHHHhhHHhcCCCCCCCCC
Confidence            456999999876   367789999999985  688999987754211   12   25999999999999998764334

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.40  E-value=4.8e-09  Score=72.32  Aligned_cols=67  Identities=33%  Similarity=0.677  Sum_probs=51.9

Q ss_pred             hccccchhhhcCCC-CCCccchhhhhhccCCCCccccccccCcccccc-------ccCCCCHHHHhhccccCCCCCCC
Q 038792           34 NRLAPCLRYLNGSR-DVPDSCCDPLKSVIKDNPECLCSMISNRGSRRA-------EEAGINVSAAQELPGKCGQRVNP  103 (148)
Q Consensus        34 ~~L~pCl~yv~g~~-~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~-------~~~~in~~~a~~LP~~Cgv~~p~  103 (148)
                      ..+.+|.+|++++. .|+..||++|+++   ++.|.|..++.......       ...+++..+|..||+.||+..++
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~   87 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY   87 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC
Confidence            35889999999875 6778999999998   58999987775321100       01258899999999999999875

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=91.10  E-value=0.14  Score=35.74  Aligned_cols=67  Identities=22%  Similarity=0.463  Sum_probs=42.0

Q ss_pred             ccccchhhhc--C---CCCCCccchhhhhhccCCC-CccccccccCccccccccCCCCHH-HHhhccccCCCCCCCC
Q 038792           35 RLAPCLRYLN--G---SRDVPDSCCDPLKSVIKDN-PECLCSMISNRGSRRAEEAGINVS-AAQELPGKCGQRVNPL  104 (148)
Q Consensus        35 ~L~pCl~yv~--g---~~~P~~~CC~~lk~l~~~~-~~ClC~~lk~~~~~~~~~~~in~~-~a~~LP~~Cgv~~p~~  104 (148)
                      +|.-|.+.+.  +   +..+...||.-++++.+.+ ..|||..+|..-   ....++|.. ....|-..||-..|..
T Consensus         8 kLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~v---lg~i~~~ipv~l~~lln~CGk~~p~g   81 (85)
T PF14547_consen    8 KLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANV---LGLINVNIPVALNLLLNACGKTVPSG   81 (85)
T ss_pred             hhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhc---ccccccccccHHHHHHHHhCCcCcCC
Confidence            4667877771  1   1234578999999998654 479998777431   111223333 3445678899887653

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=90.42  E-value=0.17  Score=35.35  Aligned_cols=64  Identities=27%  Similarity=0.538  Sum_probs=41.1

Q ss_pred             ccccchhhhcC-----CCCCCccchhhhhhccCCC-CccccccccCccccccccCCCC--HHHHh-hccccCCCCCCCC
Q 038792           35 RLAPCLRYLNG-----SRDVPDSCCDPLKSVIKDN-PECLCSMISNRGSRRAEEAGIN--VSAAQ-ELPGKCGQRVNPL  104 (148)
Q Consensus        35 ~L~pCl~yv~g-----~~~P~~~CC~~lk~l~~~~-~~ClC~~lk~~~~~~~~~~~in--~~~a~-~LP~~Cgv~~p~~  104 (148)
                      +|.-|..-+..     +..|..+||.-++++.+-+ ..|+|..+|..      .+||+  ..... -|-..||-..|+.
T Consensus        10 kLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan------~lgi~~~~pv~l~llln~CGk~~P~g   82 (85)
T cd01958          10 KLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN------ILGISINIPVALSLLLNSCGRNVPPG   82 (85)
T ss_pred             HhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc------ccCcccccChhHHHHHHHHcCcCCCC
Confidence            46677776632     1234478999999998754 57999988753      23443  34333 3456788887653

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=81.69  E-value=1.4  Score=31.18  Aligned_cols=13  Identities=31%  Similarity=0.319  Sum_probs=7.5

Q ss_pred             CchhHHHHHHHHH
Q 038792            1 MEMKLISSCGIAL   13 (148)
Q Consensus         1 m~~~~~~~~~~~~   13 (148)
                      |++|+.+++.+++
T Consensus         1 MaSK~~llL~l~L   13 (95)
T PF07172_consen    1 MASKAFLLLGLLL   13 (95)
T ss_pred             CchhHHHHHHHHH
Confidence            8877754444433

Some of them may be involved in resistance to environmental stress [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	148
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	6e-07
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	2e-06
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	5e-06
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	3e-05
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	8e-04

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 44.1 bits (104), Expect = 6e-07
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 36 LAPCLRYLNGSRDVPDSCCDPLKSVI-----KDNPECLCSMISNRGSRRAEEAGINVSAA 90
          + PCL Y+ G       CCD +K++      + + +  C+ +            +N   A
Sbjct: 10 VRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI---HNLNEDNA 66

Query: 91 QELPGKCG 98
          + +P KCG
Sbjct: 67 RSIPPKCG 74

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 36 LAPCLRYLNGSRDVPDSCCDPLKSVI-----KDNPECLCSMISNRGSRRAEEAGINVSAA 90
          LAPC+ Y+ G   VP +CC+ +++V        + +  C+ +    +      G+N + A
Sbjct: 11 LAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASV---PGVNPNNA 67

Query: 91 QELPGKCG 98
            LPGKCG
Sbjct: 68 AALPGKCG 75

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 41.4 bits (97), Expect = 5e-06
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)

Query: 36 LAPCLRYLNGSRDVPDSCCDPLKSV-----IKDNPECLCSMISNRGSRRAEEAGINVSAA 90
          LA C+ +L     VP SCC  +K++        +   +CS +           GIN + A
Sbjct: 10 LAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGA---VRGINPNNA 66

Query: 91 QELPGKCG 98
          + LPGKCG
Sbjct: 67 EALPGKCG 74

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 36 LAPCLRYLNGSRDVP-DSCCDPLKSVI-----KDNPECLCSMISNRGSRRAEEAGINVSA 89
          +APC+ Y  G    P   CC  ++S+        +    C+ + N  +     +G+N   
Sbjct: 11 IAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG---VSGLNAGN 67

Query: 90 AQELPGKCG 98
          A  +P KCG
Sbjct: 68 AASIPSKCG 76

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 35.6 bits (82), Expect = 8e-04
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 9/68 (13%)

Query: 36 LAPCLRYLNGSRDVPDSCCDPLKSVI-----KDNPECLCSMISNRGSRRAEEAGINVSAA 90
          LAPCL YL  +  +   CC  +K+++      ++ +  C+ + +     +   GIN+  A
Sbjct: 11 LAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS---GINLGKA 66

Query: 91 QELPGKCG 98
            LP  CG
Sbjct: 67 AGLPSTCG 74

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.56
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.55
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.54
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.53
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.51
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.48
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.47
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.46
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.44
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	94.13
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	92.08
1hss_A	124	0.19 alpha-amylase inhibitor; cereal inhibitor, an	85.87
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	80.02

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.56  E-value=3.5e-16  Score=105.67  Aligned_cols=68  Identities=24%  Similarity=0.542  Sum_probs=56.0

Q ss_pred             cchh---hccccchhhhcCC--CCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCC
Q 038792           30 TYCL---NRLAPCLRYLNGS--RDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNP  103 (148)
Q Consensus        30 ~~C~---~~L~pCl~yv~g~--~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~  103 (148)
                      .+|.   .+|.||++|++++  ..|+++||+++|+   .++.|+|.+++++.   ++.++||.++|++||++||+++|+
T Consensus         3 ~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~---~~~~gin~~~A~~LP~~Cgv~~p~   75 (77)
T 2rkn_A            3 DLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNSPW---LGSFGVDPELASALPKQCGLANAP   75 (77)
T ss_dssp             CBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT---CCHHHHHTTTTCHH---HHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred             chHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh---cCcCCcCcccCCcc---hhhcCcCHHHHHHHHHHcCCCCCC
Confidence            4686   5689999999974  4788899999998   35799999877642   234689999999999999999875

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.55  E-value=2e-16  Score=110.90  Aligned_cols=71  Identities=28%  Similarity=0.667  Sum_probs=58.2

Q ss_pred             cchh---hccccchhhhcCCCCCCccchhhhhhccCC-----CCccccccccCccccccccCCCCHHHHhhccccCCCCC
Q 038792           30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-----NPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRV  101 (148)
Q Consensus        30 ~~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-----~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~  101 (148)
                      .+|.   ..|+||++|++|++.|++.||++++++++.     ++.|+|..+|+...   ...+||.+||.+||++|||++
T Consensus         2 isC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~---~~~~in~~~a~~LP~~CgV~~   78 (93)
T 2ljo_A            2 ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAG---SITKLNTNNAAALPGKCGVNI   78 (93)
T ss_dssp             CSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGG---GCTTCCHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhh---ccCCcCHHHHHhhhHhcCCCC
Confidence            5687   579999999998878999999999999752     45788887886421   235799999999999999998


Q ss_pred             CC
Q 038792          102 NP  103 (148)
Q Consensus       102 p~  103 (148)
                      |.
T Consensus        79 p~   80 (93)
T 2ljo_A           79 PY   80 (93)
T ss_dssp             SS
T ss_pred             CC
Confidence            73

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.54  E-value=3.3e-16  Score=103.54  Aligned_cols=63  Identities=22%  Similarity=0.491  Sum_probs=54.3

Q ss_pred             hh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCC
Q 038792           32 CL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVN  102 (148)
Q Consensus        32 C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p  102 (148)
                      |. .+|.||++|+++++.|+++||+++|+.    ..|+|.++|++..   . .+||.++|++||++||+++|
T Consensus         2 C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~----~~ClC~~~k~~~~---~-~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            2 CQASQLAVCASAILSGAKPSGECCGNLRAQ----QGCFCQYAKDPTY---G-QYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             CCSSTTHHHHHHHTTCCCCCHHHHHHHHHH----SSHHHHGGGCSTT---H-HHHTCHHHHHHHHHHTSCCS
T ss_pred             CChhhcccCHHHHcCCCCCCHHHHHhhCCC----CCCCCccccCccc---c-cccCHHHHHHHHHHcCCCCC
Confidence            66 679999999998878999999999984    7999999888632   1 35999999999999999986

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.53  E-value=4e-16  Score=103.68  Aligned_cols=67  Identities=21%  Similarity=0.527  Sum_probs=56.6

Q ss_pred             chh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCCCCCC
Q 038792           31 YCL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNPLGCL  107 (148)
Q Consensus        31 ~C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~~~C~  107 (148)
                      +|. .+|.||++|++++..|+++||+++|+.    ..|+|.++|++..   . .+||.++|++||++||+++|  .|.
T Consensus         2 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~----~~ClC~~~k~~~~---~-~~in~~~A~~Lp~~Cgv~~P--~C~   69 (69)
T 1l6h_A            2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQ----QGCFCQFAKDPRY---G-RYVNSPNARKAVSSCGIALP--TCH   69 (69)
T ss_dssp             CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHH----HHHHHHHTTCSSH---H-HHTTTTTGGGCCCCCSSCSC--CCC
T ss_pred             CCChhhcccCHHHHcCCCCCCHHHHHhhCCC----CCCCCccccCccc---c-cccCHHHHHHHHHHcCCCCC--CCC
Confidence            577 679999999998878999999999984    7999999887632   2 35999999999999999986  463

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.51  E-value=5.1e-16  Score=108.32  Aligned_cols=68  Identities=34%  Similarity=0.768  Sum_probs=55.7

Q ss_pred             cchh---hccccchhhhcCCCCCCccchhhhhhcc-------CCCCccccccccCccccccccC-CCCHHHHhhccccCC
Q 038792           30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVI-------KDNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCG   98 (148)
Q Consensus        30 ~~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~-------~~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cg   98 (148)
                      .+|.   .+|.||++|++|++.|+++||+++|+++       ++++.|+|.+...      ..+ +||.++|++||++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~------~~~~~in~~~A~~LP~~Cg   75 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS------ASVPGVNPNNAAALPGKCG   75 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH------HHSTTCCHHHHHHHHHHTT
T ss_pred             CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc------cccCccChHHHHHHHHHcC
Confidence            4687   4799999999987778899999999987       4557899974221      224 899999999999999


Q ss_pred             CCCCC
Q 038792           99 QRVNP  103 (148)
Q Consensus        99 v~~p~  103 (148)
                      +++|+
T Consensus        76 v~~p~   80 (92)
T 2alg_A           76 VSIPY   80 (92)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            99875

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.48  E-value=1.9e-15  Score=105.25  Aligned_cols=67  Identities=36%  Similarity=0.746  Sum_probs=54.1

Q ss_pred             chh---hccccchhhhcCCCCCCccchhhhhhccC-------CCCccccccccCccccccccC-CCCHHHHhhccccCCC
Q 038792           31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIK-------DNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCGQ   99 (148)
Q Consensus        31 ~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~-------~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cgv   99 (148)
                      +|.   ..|.||++|+++++.|+++||+++|++++       +++.|+|.  ++.    +..+ +||.++|++||++||+
T Consensus         2 ~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~----~~~~~~in~~~A~~LP~~Cgv   75 (91)
T 1siy_A            2 TCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAA----AGAVRGINPNNAEALPGKCGV   75 (91)
T ss_dssp             CTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHH----TTCCSSCCHHHHHHHHHHHTC
T ss_pred             CHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCccc--CCc----ccccCCcCHHHHHHHHHHcCC
Confidence            476   57999999999876688999999999864       24589996  542    2234 7999999999999999


Q ss_pred             CCCC
Q 038792          100 RVNP  103 (148)
Q Consensus       100 ~~p~  103 (148)
                      ++|+
T Consensus        76 ~~p~   79 (91)
T 1siy_A           76 NIPY   79 (91)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            9774

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.47  E-value=2e-15  Score=104.94  Aligned_cols=67  Identities=27%  Similarity=0.633  Sum_probs=54.1

Q ss_pred             chh---hccccchhhhcCCCCCCccchhhhhhccC-------CCCccccccccCccccccccC-CCCHHHHhhccccCCC
Q 038792           31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIK-------DNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCGQ   99 (148)
Q Consensus        31 ~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~-------~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cgv   99 (148)
                      +|.   .+|.||++|++|++.|+++||+++|++++       ++..|+|.  ++..    ..+ +||.++|++||++||+
T Consensus         2 ~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClCl--k~~~----~~~~~in~~~A~~LP~~C~v   75 (90)
T 1bwo_A            2 DCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCL--KGIA----RGIHNLNEDNARSIPPKCGV   75 (90)
T ss_dssp             CHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHH--HHHH----TTCTTCCHHHHHTHHHHHTC
T ss_pred             CHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCc--cCch----hccCCcCHHHHHHHHHHcCC
Confidence            576   57999999999876688899999999873       25689994  5431    223 7999999999999999


Q ss_pred             CCCC
Q 038792          100 RVNP  103 (148)
Q Consensus       100 ~~p~  103 (148)
                      ++|+
T Consensus        76 ~~p~   79 (90)
T 1bwo_A           76 NLPY   79 (90)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            9875

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.46  E-value=4.9e-15  Score=103.26  Aligned_cols=67  Identities=33%  Similarity=0.723  Sum_probs=53.8

Q ss_pred             cchh---hccccchhhhcCCCCCCccchhhhhhccCC-------CCccccccccCccccccccC-CCCHHHHhhccccCC
Q 038792           30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-------NPECLCSMISNRGSRRAEEA-GINVSAAQELPGKCG   98 (148)
Q Consensus        30 ~~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-------~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~Cg   98 (148)
                      .+|.   ..|.||++|++|++.|+ .||++++++++.       ++.|+|.  ++.    +..+ +||.++|.+||++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClCl--k~~----~~~~~~in~~~A~~LP~~C~   74 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCL--KSA----AGAISGINLGKAAGLPSTCG   74 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHH--HHH----HHHCTTCCHHHHHHHHHHTT
T ss_pred             CChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCc--ccc----ccccCCcChhHHHHHHHHcC
Confidence            4686   57999999999865576 999999999753       5789995  542    1234 899999999999999


Q ss_pred             CCCCC
Q 038792           99 QRVNP  103 (148)
Q Consensus        99 v~~p~  103 (148)
                      +++|+
T Consensus        75 v~~p~   79 (91)
T 1t12_A           75 VNIPY   79 (91)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            99874

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.44  E-value=4.5e-15  Score=103.68  Aligned_cols=68  Identities=28%  Similarity=0.678  Sum_probs=53.5

Q ss_pred             cchh---hccccchhhhcCCC-CCCccchhhhhhccC-------CCCccccccccCccccccccC-CCCHHHHhhccccC
Q 038792           30 TYCL---NRLAPCLRYLNGSR-DVPDSCCDPLKSVIK-------DNPECLCSMISNRGSRRAEEA-GINVSAAQELPGKC   97 (148)
Q Consensus        30 ~~C~---~~L~pCl~yv~g~~-~P~~~CC~~lk~l~~-------~~~~ClC~~lk~~~~~~~~~~-~in~~~a~~LP~~C   97 (148)
                      .+|.   ..|.||++|++|++ .|+++||+++|++++       ++..|+|.  +...    ..+ +||.++|++||++|
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~--~~~~----~~~~~in~~~A~~LP~~C   75 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL--KNAA----AGVSGLNAGNAASIPSKC   75 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHH----TTSTTCCHHHHHHHHHHH
T ss_pred             CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEee--cccc----ccccCcCHHHHHHHHHHc
Confidence            4686   57999999999876 577799999999962       34689996  3221    123 79999999999999


Q ss_pred             CCCCCC
Q 038792           98 GQRVNP  103 (148)
Q Consensus        98 gv~~p~  103 (148)
                      |+++|+
T Consensus        76 ~v~~p~   81 (93)
T 1afh_A           76 GVSIPY   81 (93)
T ss_dssp             HCCCSS
T ss_pred             CCCCCC
Confidence            999874

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=94.13  E-value=0.0015  Score=55.91  Aligned_cols=57  Identities=23%  Similarity=0.603  Sum_probs=36.2

Q ss_pred             ccchhhhhhccCCCCccccccccCccccccc------cCCCCHHHHhhccccCCCCCCCCCCCCC
Q 038792           51 DSCCDPLKSVIKDNPECLCSMISNRGSRRAE------EAGINVSAAQELPGKCGQRVNPLGCLRG  109 (148)
Q Consensus        51 ~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~------~~~in~~~a~~LP~~Cgv~~p~~~C~~~  109 (148)
                      ..||+.|+.+. .++.|.|..++..-.....      +...-..+|..||..||+. .|..|+-.
T Consensus       429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~-~~~~c~~~  491 (500)
T 3ob4_A          429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR-APQRCDLD  491 (500)
T ss_dssp             HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCC-CCSCCCCC
T ss_pred             HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCC-CCccCCcc
Confidence            47999999872 1279999877652110000      0001135699999999997 45679843

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=92.08  E-value=0.027  Score=37.94  Aligned_cols=71  Identities=25%  Similarity=0.533  Sum_probs=48.9

Q ss_pred             cchhhccccchhhhcCCCCCCccchhhhhhccCC-CCccccccccCccccccccCCCCHHHHhh-ccccCCCCCCCCC-C
Q 038792           30 TYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-NPECLCSMISNRGSRRAEEAGINVSAAQE-LPGKCGQRVNPLG-C  106 (148)
Q Consensus        30 ~~C~~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-~~~ClC~~lk~~~~~~~~~~~in~~~a~~-LP~~Cgv~~p~~~-C  106 (148)
                      ..|- +|.-|.+-+.|...|...||+-++++.+. ...|+|..+|-     . .. +|.+.+.+ |-..||-..|+.. |
T Consensus         6 ~~CP-kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik~-----L-gi-lnlpv~L~llln~Cgk~~P~gF~C   77 (80)
T 1hyp_A            6 PSCP-DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA-----L-GI-LNLNRNLQLILNSCGRSYPSNATC   77 (80)
T ss_dssp             CCSC-CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHH-----H-TC-SCHHHHHHHHHHHTTCSSCCCCCC
T ss_pred             CCCC-chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhccc-----c-ce-eecChhHHHHHHHhCCcCcCCCCC
Confidence            3465 68888887754323456899999999764 34799987762     1 13 57776666 5678999988754 7


Q ss_pred             CC
Q 038792          107 LR  108 (148)
Q Consensus       107 ~~  108 (148)
                      ..
T Consensus        78 ~~   79 (80)
T 1hyp_A           78 PR   79 (80)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2

Probab=85.87  E-value=0.057  Score=39.14  Aligned_cols=65  Identities=20%  Similarity=0.357  Sum_probs=40.4

Q ss_pred             ccccchhhhcC----CCCC---CccchhhhhhccCCCCccccccccCccccccccCC-----------------CCHHHH
Q 038792           35 RLAPCLRYLNG----SRDV---PDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAG-----------------INVSAA   90 (148)
Q Consensus        35 ~L~pCl~yv~g----~~~P---~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~-----------------in~~~a   90 (148)
                      .|..|..|+..    ...|   ...||+.|+.+   .+.|.|..+...-.......+                 +-...|
T Consensus        16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A   92 (124)
T 1hss_A           16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   92 (124)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred             cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence            48889999952    2223   24699999997   489999766542110000000                 111258


Q ss_pred             hhccccCCCCCC
Q 038792           91 QELPGKCGQRVN  102 (148)
Q Consensus        91 ~~LP~~Cgv~~p  102 (148)
                      ..||..||+..+
T Consensus        93 ~~LP~~Cnl~~~  104 (124)
T 1hss_A           93 ASITAVCRLPIV  104 (124)
T ss_dssp             TTHHHHTTCCEE
T ss_pred             HhchhhcCCCCC
Confidence            889999999866

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=80.02  E-value=0.17  Score=33.05  Aligned_cols=54  Identities=22%  Similarity=0.514  Sum_probs=34.2

Q ss_pred             ccchhhhhhccCCCCccccccccCcccccccc--------CCCCHHHHhhccccCCCCCCCCCCCC
Q 038792           51 DSCCDPLKSVIKDNPECLCSMISNRGSRRAEE--------AGINVSAAQELPGKCGQRVNPLGCLR  108 (148)
Q Consensus        51 ~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~--------~~in~~~a~~LP~~Cgv~~p~~~C~~  108 (148)
                      ..||+.++.+   ++.|.|..++.........        ..=...+|..||..||+.. +..|+-
T Consensus         8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~-~~~C~~   69 (72)
T 2ds2_B            8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-IGACPF   69 (72)
T ss_dssp             HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT-CCCCCC
T ss_pred             HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC-CCcCCC
Confidence            4699999986   6899998776531000000        0123467889999999953 345763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	148
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	1e-09
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	3e-07

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 50.2 bits (120), Expect = 1e-09
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 33 LNRLAPCLRYLNGSRDVPDSCCDPLKSVI-----KDNPECLCSMISNRGSRRAEEAGINV 87
           +++ PCL Y+ G       CC+ ++ +        + + +C+ +            +N+
Sbjct: 7  DSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARG---IHNLNL 63

Query: 88 SAAQELPGKCG 98
          + A  +P KC 
Sbjct: 64 NNAASIPSKCN 74

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 43.7 bits (103), Expect = 3e-07
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 33 LNRLAPCLRYLNGSRDVPDS-CCDPLKSVI-----KDNPECLCSMISNRGSRRAEEAGIN 86
           + +APC+ Y  G    P + CC  ++S+        +    C+ + N  +     +G+N
Sbjct: 8  ASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG---VSGLN 64

Query: 87 VSAAQELPGKCG 98
             A  +P KCG
Sbjct: 65 AGNAASIPSKCG 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.49
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.46
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	99.24
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.24
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	88.92
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	85.77
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	85.14
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	84.46
d1hssa_	120	0.19 alpha-amylase inhibitor {Wheat (Triticum aest	80.56

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.49  E-value=5.4e-16  Score=106.50  Aligned_cols=69  Identities=22%  Similarity=0.634  Sum_probs=56.9

Q ss_pred             chh---hccccchhhhcCCCCCCccchhhhhhccCC-----CCccccccccCccccccccCCCCHHHHhhccccCCCCCC
Q 038792           31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-----NPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVN  102 (148)
Q Consensus        31 ~C~---~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-----~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p  102 (148)
                      +|.   ..|.||++|++|+++|++.||++++++++.     ++.|+|+.+++..   ....+||.+||.+||++||+++|
T Consensus         2 ~C~~v~~~l~pCl~Yl~g~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~---~~~~~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           2 NCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIA---RGIHNLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH---HTCTTCCHHHHHHHHHHTTCCCC
T ss_pred             CHHHHHHHHHhhHHHHcCCCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhc---ccCCCcCHHHHHhchHhcCCCCC
Confidence            576   579999999998888999999999999752     4568888787642   12357999999999999999887

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.46  E-value=1.3e-15  Score=104.84  Aligned_cols=70  Identities=27%  Similarity=0.665  Sum_probs=56.6

Q ss_pred             cchh---hccccchhhhcCCC-CCCccchhhhhhccC-----CCCccccccccCccccccccCCCCHHHHhhccccCCCC
Q 038792           30 TYCL---NRLAPCLRYLNGSR-DVPDSCCDPLKSVIK-----DNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQR  100 (148)
Q Consensus        30 ~~C~---~~L~pCl~yv~g~~-~P~~~CC~~lk~l~~-----~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~  100 (148)
                      .+|.   ..|.||++|++|++ .|++.||++++++++     .++.|+|+.+++..   ....+||.+|+.+||++||++
T Consensus         2 i~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~---~~~~~in~~ra~~LP~~C~v~   78 (93)
T d1fk5a_           2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAA---AGVSGLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH---HTCTTCCHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcc---cccCCcCHHHHHhhhHhcCCC
Confidence            5787   57999999999875 788999999999975     24568887777642   123589999999999999998


Q ss_pred             CC
Q 038792          101 VN  102 (148)
Q Consensus       101 ~p  102 (148)
                      +|
T Consensus        79 l~   80 (93)
T d1fk5a_          79 IP   80 (93)
T ss_dssp             CS
T ss_pred             CC
Confidence            76

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.24  E-value=2e-13  Score=89.02  Aligned_cols=65  Identities=20%  Similarity=0.517  Sum_probs=56.7

Q ss_pred             chh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCC
Q 038792           31 YCL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNP  103 (148)
Q Consensus        31 ~C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~  103 (148)
                      .|+ .+|.+|++.++++..|+..||+.+|+    |..|||+|+|++..   ++ .||..+|+++-..|||++|.
T Consensus         2 ~C~p~~L~~C~~ai~~g~~PS~~CC~kLke----Q~~ClC~Y~k~P~~---~~-yv~spnarkv~~aCgvp~P~   67 (69)
T d1l6ha_           2 GCNAGQLTVCTGAIAGGARPTAACCSSLRA----QQGCFCQFAKDPRY---GR-YVNSPNARKAVSSCGIALPT   67 (69)
T ss_dssp             CSTTTTHHHHHHHHTTCCSTTHHHHHHHHH----HHHHHHHHTTCSSH---HH-HTTTTTGGGCCCCCSSCSCC
T ss_pred             CCChhhccccHHHHhCCCCCcHHHHHHHHh----cCCccceeccCccH---HH-HcCCHHHHHHHHhcCCCCCC
Confidence            477 78999999999999999999999999    46899999999843   23 49999999999999999874

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.24  E-value=2.5e-13  Score=88.03  Aligned_cols=64  Identities=22%  Similarity=0.499  Sum_probs=55.9

Q ss_pred             hh-hccccchhhhcCCCCCCccchhhhhhccCCCCccccccccCccccccccCCCCHHHHhhccccCCCCCCC
Q 038792           32 CL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAGINVSAAQELPGKCGQRVNP  103 (148)
Q Consensus        32 C~-~~L~pCl~yv~g~~~P~~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~  103 (148)
                      |+ .+|.+|++.+++++.|+..||+.+|+    |..|||+|+|++..   ++ .||..+|+++-+.|||++|.
T Consensus         2 C~p~~L~~C~~Ai~~g~~PS~~CC~kLke----Q~~ClC~Y~kdP~~---~~-yv~spnarkv~~aCgvp~P~   66 (67)
T d1tuka1           2 CQASQLAVCASAILSGAKPSGECCGNLRA----QQGCFCQYAKDPTY---GQ-YIRSPHARDTLTSCGLAVPH   66 (67)
T ss_dssp             CCGGGGGGGHHHHHHCCCCCHHHHHHHHH----HGGGHHHHTTCTTT---HH-HHTSHHHHHHHHHTTCCCCC
T ss_pred             CChhhccccHHHHhcCCCCcHHHHHHHHh----cCCccceecCCccH---HH-HcCCHHHHHHHHhcCCCCCC
Confidence            66 68999999999998999999999999    47899999999853   23 48999999999999999873

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=88.92  E-value=0.045  Score=37.89  Aligned_cols=70  Identities=33%  Similarity=0.674  Sum_probs=44.3

Q ss_pred             ccchh-----hccccchhhhcCC---C---CC-----C-----------ccchhhhhhccCCCCccccccccCccccccc
Q 038792           29 STYCL-----NRLAPCLRYLNGS---R---DV-----P-----------DSCCDPLKSVIKDNPECLCSMISNRGSRRAE   81 (148)
Q Consensus        29 ~~~C~-----~~L~pCl~yv~g~---~---~P-----~-----------~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~   81 (148)
                      ...|.     ..|..|..||.-.   .   .+     .           ..||+.|+.+   ++.|.|..++..-.....
T Consensus        15 ~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~q   91 (125)
T d1psya_          15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ   91 (125)
T ss_dssp             SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHHHHH
Confidence            35686     3699999999621   0   11     0           1499999997   699999876642100000


Q ss_pred             c---CCCC----HHHHhhccccCCCCC
Q 038792           82 E---AGIN----VSAAQELPGKCGQRV  101 (148)
Q Consensus        82 ~---~~in----~~~a~~LP~~Cgv~~  101 (148)
                      .   -+-.    ..+|..||..||+..
T Consensus        92 q~~~~~~~~~~~~q~Ak~LPs~C~i~~  118 (125)
T d1psya_          92 QGQLHGEESERVAQRAGEIVSSCGVRC  118 (125)
T ss_dssp             HTTCCTTCSHHHHHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHHHHHHHhChhhcCCcc
Confidence            0   1112    457889999999974

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=85.14  E-value=0.079  Score=33.60  Aligned_cols=67  Identities=25%  Similarity=0.523  Sum_probs=45.7

Q ss_pred             ccccchhhhcCCCCCCccchhhhhhccCC-CCccccccccCccccccccCCCCHHHHhh-ccccCCCCCCCCC-CCC
Q 038792           35 RLAPCLRYLNGSRDVPDSCCDPLKSVIKD-NPECLCSMISNRGSRRAEEAGINVSAAQE-LPGKCGQRVNPLG-CLR  108 (148)
Q Consensus        35 ~L~pCl~yv~g~~~P~~~CC~~lk~l~~~-~~~ClC~~lk~~~~~~~~~~~in~~~a~~-LP~~Cgv~~p~~~-C~~  108 (148)
                      ++.-|.+-+.+...+...||.-++++.+- ...|+|..+|..      .. +|...... |-..||-..|+.. |.+
T Consensus         5 Klg~C~nvLg~~~~~~~~CC~Ll~GL~dleAAvCLCtaika~------~l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRAL------GI-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHHH------TC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhhHHHHhcCccCCCCCcchHHhhHHHHHHHHHHHHHHHHh------hh-ccccchHHHHHHHcCCcCcCCCcCCC
Confidence            45667777765444457899999998764 347999887731      12 66665554 5668999887654 765

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=84.46  E-value=0.057  Score=36.27  Aligned_cols=72  Identities=26%  Similarity=0.435  Sum_probs=45.1

Q ss_pred             cchh------hccccchhhhcC-----CC-C------CC-ccchhhhhhccCCCCccccccccCccccccccCC--CCHH
Q 038792           30 TYCL------NRLAPCLRYLNG-----SR-D------VP-DSCCDPLKSVIKDNPECLCSMISNRGSRRAEEAG--INVS   88 (148)
Q Consensus        30 ~~C~------~~L~pCl~yv~g-----~~-~------P~-~~CC~~lk~l~~~~~~ClC~~lk~~~~~~~~~~~--in~~   88 (148)
                      ..|.      ..|..|..|+.-     +. .      +. ..||+.++.+   ++.|.|..++..-......-.  --..
T Consensus         9 q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~~q   85 (103)
T d1s6da_           9 SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMS   85 (103)
T ss_dssp             SSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHHH
T ss_pred             ccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHHHhHHHHHHHHH
Confidence            4676      359999999952     11 1      12 3699999997   699999766542110000001  1135


Q ss_pred             HHhhccccCCCCCCCCCC
Q 038792           89 AAQELPGKCGQRVNPLGC  106 (148)
Q Consensus        89 ~a~~LP~~Cgv~~p~~~C  106 (148)
                      .|..||+.||+.  |..|
T Consensus        86 ~Ak~LPs~C~i~--P~~C  101 (103)
T d1s6da_          86 MAHNLPIECNLM--SQPC  101 (103)
T ss_dssp             HHHHHHHHTTSS--SSCS
T ss_pred             HHHhChHhcCCC--CccC
Confidence            688999999986  4446

>d1hssa_ a.52.1.2 (A:) 0.19 alpha-amylase inhibitor {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: 0.19 alpha-amylase inhibitor
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=80.56  E-value=0.084  Score=36.32  Aligned_cols=66  Identities=18%  Similarity=0.360  Sum_probs=41.1

Q ss_pred             ccccchhhhcC---CCCCC----ccchhhhhhccCCCCccccccccCccccc------------cccC-C----CCHHHH
Q 038792           35 RLAPCLRYLNG---SRDVP----DSCCDPLKSVIKDNPECLCSMISNRGSRR------------AEEA-G----INVSAA   90 (148)
Q Consensus        35 ~L~pCl~yv~g---~~~P~----~~CC~~lk~l~~~~~~ClC~~lk~~~~~~------------~~~~-~----in~~~a   90 (148)
                      -|..|..|+..   +..++    ..||+.+..+   .+.|.|..+....+..            ...+ +    .-...|
T Consensus        12 pL~~CR~yv~~q~~G~~~~~~~k~~CC~eLa~i---~~~CRCeALr~~~~~~~~e~G~~~g~~~~e~~PgC~re~~~~~a   88 (120)
T d1hssa_          12 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   88 (120)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHCCC---------STTCCHHHHHHHH
T ss_pred             ccHHHHHHHHHHhcCCCCcchHHHHHHHHHHhc---CcccchHHHHHHHhhhccccCCCCCccccccCCCCChHHHHHHH
Confidence            47789999962   22333    5799999997   4799997654321100            0001 1    122457


Q ss_pred             hhccccCCCCCCC
Q 038792           91 QELPGKCGQRVNP  103 (148)
Q Consensus        91 ~~LP~~Cgv~~p~  103 (148)
                      ..||..||++++.
T Consensus        89 a~Lpa~CNl~tv~  101 (120)
T d1hssa_          89 ASITAVCRLPIVV  101 (120)
T ss_dssp             TTHHHHTTCCEEC
T ss_pred             hhcccccCCCccC
Confidence            7899999998753