Citrus Sinensis ID: 038961

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------
Protein Sequence
DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSSQQQQQLCGKGFVSWKPMKCNSEKDRVSNNNTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSISVANNKNNGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVIKNLKKDTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLISN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccccccccccccHHHHccccccccccccccHHHccccccccccccEEEccccccccEEEcccccccccccccHHcccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccEccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccEEcccccccHHHHHHHcc
Coil and Loop (DISEMBL)
drefkhvckfcsksfpcgrslgghmrshmitvtettdghhkqlakkklpsvnntetngyglrenpkkskriadssennssQQQQQLCgkgfvswkpmkcnsekdrvsnnntsledqdsltsanqklvtdsqsdnetaapnrkrrskrrtrymatptanscsisvannknngsssVSEIEQEQEEVAMCLMMLSRdvgsrgilnsvaessdnnsldsEKAKVIKNLKKDteldqaelgsskqnstskknvcnsfdpelrsdslkrsttdasdaefykdsqkrskfecatcNKIFHSYqalgghrashkkikgcfatkidssensieaehspdptadskliksinnensadhffvadcddhraetscgakkkhecpiclkvfpsgqalgghkrshllggnearnspaivlenpipeirnfldlnlpapdeedsnahlGLQQWWISSSHKHEALVSLISN
Flexible Loop (DISEMBL)
drefkhvckfcsksfpcgrslgghmRSHMITVTETTDGHhkqlakkklpsvnntetngyglrenpkKSKRIADSsennssqqqqqLCGKGFVSWKPMKCNSEKDrvsnnntsledqdsltsanqklvtdsqsdnetaapnrkrrskrrtrymatptanscsisvannknngSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSvaessdnnsldseKAKVIKNLKKdteldqaelgsskqnstskknvcnsfdpelrsdslkrsttdasdaefykdsqkrskfECATCNKIFHSyqalgghrasHKKIKGCFATKIDSsensieaehspdptaDSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLISN
Low Complexity Region (SEG)
DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADssennssqqqqqLCGKGFVSWKPMKCNSEKDRVSNNNTSLEDQDSLTSANQKLVTDSQSDNETAAPNrkrrskrrtrYMATPTANSCSISVANNKNNGsssvseieqeqeevAMCLMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVIKNLKKDTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLISN
Disordered region (IsUnstruct)
****KHVCKFCSKSFPCGRSLGGHMRSHMIT**********************************************************GFVSW********************************************************************************************MCLMML*******************************************************************************************FECATCNKIFHSYQALGGHRASHKKIKGCFAT*********************************DHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGG****************AIVLENPIPEIRNFLDLNL**********HLGLQQWWIS**************
Disordered Region (DISOPRED)
*REFKHVCKFCSKSFPCGRSLGGHMRSH***************************************************************************************QDSLTSANQKLVTDSQSDNET***************************************************CLMML*********************************************************************************************CATCNKIFHSYQALGGHRASHK*****************************************************************CPICLKVFPSGQALGGHKRSHL************************LDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLI**
Disordered Region (DISEMBL)
DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTE*************LPSVNNTETNGYGLRE***********************CGKGFVSWKPMKCNSEKDRVSNNNTSLEDQDSLTSAN*************************TRYMATPTANSCSISVANN*************EQEEVAMCLMMLSRDVGSRGILNSVAE*********EKAKVIKNLKKDTELDQ***************VCNSFDPELR***********************SKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSS**************DSKLIKSINNENSADHFFVADCDDH**********KHECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLISN
Disordered Region (DISPRO)
**EFKHVCKFCSKSFPCGRSL***********************************NGYGLRENPKKSKRIADS*EN**SQQQQQLC*KGFVSWKP**C*********************************************************************************EQEEVAMCLMMLSR**************************************************************************************RSKFECATCNKIFHSYQALGGH*****************************************************************KKKHECPICLKVFPSGQ*L*******************************FLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLISN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSSQQQQQLCGKGFVSWKPMKCNSEKDRVSNNNTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSISVANNKNNGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVIKNLKKDTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALVSLISN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	457	2.2.26 [Sep-21-2011]
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.282	0.410	0.4	4e-25
Q9M202	288	Zinc finger protein ZAT9	no	no	0.245	0.388	0.426	1e-20
Q39092	267	Zinc finger protein ZAT1	no	no	0.238	0.408	0.410	2e-19
O65499	284	Zinc finger protein ZAT3	no	no	0.223	0.359	0.373	4e-14
Q9SIJ0	270	Zinc finger protein ZAT2	no	no	0.253	0.429	0.345	6e-14
Q681X4	286	Zinc finger protein ZAT5	no	no	0.288	0.461	0.371	4e-13
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.172	0.443	0.361	3e-12
Q9SSW2	273	Zinc finger protein AZF2	no	no	0.210	0.351	0.363	3e-11
Q9LX85	164	Zinc finger protein ZAT8	no	no	0.207	0.579	0.359	1e-10
Q42430	261	Zinc finger protein 1 OS=	N/A	no	0.225	0.394	0.370	3e-10

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score =  116 bits (290), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 87/175 (49%), Gaps = 46/175 (26%)

Query: 271 DAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSP 330
           D+E YK S+ R +F+C TC K+F SYQALGGHRASHKK K C  TK +  E         
Sbjct: 181 DSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACM-TKTEQVET-------- 231

Query: 331 DPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKK--HECPICLKVFPSGQALGG 388
                                          E   G K+K  HECPIC +VF SGQALGG
Sbjct: 232 -------------------------------EYVLGVKEKKVHECPICFRVFTSGQALGG 260

Query: 389 HKRSH---LLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQW 440
           HKRSH   +  G     S  + +E  +   +  +DLNLPAP+EED  + L   +W
Sbjct: 261 HKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEEDETS-LVFDEW 314

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score =  101 bits (252), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 78/150 (52%), Gaps = 38/150 (25%)

Query: 281 RSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIK 340
           + +++C TC K+F SYQALGGHRASHKK +         S N  E               
Sbjct: 170 KGRYKCETCGKVFKSYQALGGHRASHKKNR--------VSNNKTEQR------------- 208

Query: 341 SINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEA 400
              +E   D+  V             AK+ HECPICL+VF SGQALGGHKRSH + GN +
Sbjct: 209 ---SETEYDNVVVV------------AKRIHECPICLRVFASGQALGGHKRSHGV-GNLS 252

Query: 401 RNSPAIVLENPIPEIRNFLDLNLPAPDEED 430
            N    V  N   + R  +DLNLPAP EED
Sbjct: 253 VNQQRRVHRNESVKQR-MIDLNLPAPTEED 281

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 75/156 (48%), Gaps = 47/156 (30%)

Query: 279 QKRSK-FECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSK 337
           +KR+K FEC TC K+F SYQALGGHRASHKK       KI  +          D     +
Sbjct: 154 KKRNKWFECETCEKVFKSYQALGGHRASHKK-------KIAET----------DQLGSDE 196

Query: 338 LIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGG 397
           L K      S+ H                     ECPIC KVF SGQALGGHKRSH    
Sbjct: 197 LKKKKKKSTSSHH---------------------ECPICAKVFTSGQALGGHKRSHASAN 235

Query: 398 NEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNA 433
           NE      I++        + +DLNLPAP EE+  A
Sbjct: 236 NEFTRRSGIII--------SLIDLNLPAPSEEEEMA 263

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|O65499|ZAT3_ARATH Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 66/142 (46%), Gaps = 40/142 (28%)

Query: 283 KFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSI 342
           +FEC  C K+F S+QALGGHRASHK +KGCFA                + T D   + + 
Sbjct: 161 RFECGGCKKVFGSHQALGGHRASHKNVKGCFAIT--------------NVTDDPMTVST- 205

Query: 343 NNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARN 402
               S+ H       DH+ +        H+C IC +VF SGQALGGH R H     E   
Sbjct: 206 ----SSGH-------DHQGKI-LTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEE--- 250

Query: 403 SPAIVLENPIPEIRNFLDLNLP 424
                     P I   LDLN+P
Sbjct: 251 ----------PMISGALDLNVP 262

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIJ0|ZAT2_ARATH Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 43/159 (27%)

Query: 276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATK---IDSSENSIEAEHSPDP 332
           + S+   +FEC  C K+F S+QALGGHRA+HK +KGCFA K    D      +     D 
Sbjct: 140 RSSEVEERFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVDQDK 199

Query: 333 TADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRS 392
               KL+  +N                           H C IC +VF SGQALGGH R 
Sbjct: 200 GKSVKLVSGMN---------------------------HRCNICSRVFSSGQALGGHMRC 232

Query: 393 HLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDS 431
           H     E         EN   ++R  +DLN+PA    D+
Sbjct: 233 HWEKDQE---------EN---QVRG-IDLNVPAATSSDT 258

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 78/164 (47%), Gaps = 32/164 (19%)

Query: 284 FECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSIN 343
           +EC TCN+ F S+QALGGHRASHKK +        S+E     E +  P    K   S  
Sbjct: 115 YECKTCNRTFSSFQALGGHRASHKKPR-------TSTE-----EKTRLPLTQPKSSASEE 162

Query: 344 NENSADHFFVAD--CDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG----- 396
            +NS  HF V+        +     A K HEC IC   F SGQALGGH R H        
Sbjct: 163 GQNS--HFKVSGSALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTIS 220

Query: 397 -----GNEARNSP----AIVLENPIPEIRNF--LDLNLPAPDEE 429
                   +RNS      I +   + + R +  LDLNLPAP+++
Sbjct: 221 PVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLDLNLPAPEDD 264

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 40/119 (33%)

Query: 275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTA 334
           + +S   ++FEC TCNK F S+QALGGHRASHKK                     P  T 
Sbjct: 38  HTESHTSNQFECKTCNKRFSSFQALGGHRASHKK---------------------PKLTV 76

Query: 335 DSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSH 393
           + K +K ++N+   +HF                   H+C IC + F +GQALGGH R H
Sbjct: 77  EQKDVKHLSNDYKGNHF-------------------HKCSICSQSFGTGQALGGHMRRH 116

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana GN=AZF2 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 36/132 (27%)

Query: 270 SDAEFYKDSQ--------KRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSE 321
           S   F++ SQ        K   ++C  C K F SYQALGGH+ASH+ IK           
Sbjct: 84  SQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHR-IK----------- 131

Query: 322 NSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFP 381
                     PT    +I +  ++++A    +   + H    S    K HEC IC KVFP
Sbjct: 132 ---------PPT----VISTTADDSTAPTISIVAGEKHPIAAS---GKIHECSICHKVFP 175

Query: 382 SGQALGGHKRSH 393
           +GQALGGHKR H
Sbjct: 176 TGQALGGHKRCH 187

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 63/139 (45%), Gaps = 44/139 (31%)

Query: 284 FECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSIN 343
           F C TC K F S+QALGGHRASHKK+       I+SS              D  L+ S++
Sbjct: 37  FRCKTCLKEFSSFQALGGHRASHKKL-------INSS--------------DPSLLGSLS 75

Query: 344 NENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARNS 403
           N+ +            +  TS      H CPIC   FP GQALGGH R H       + S
Sbjct: 76  NKKT------------KTATS------HPCPICGVEFPMGQALGGHMRRH----RSEKAS 113

Query: 404 PA-IVLENPIPEIRNFLDL 421
           P  +V  + +PE      L
Sbjct: 114 PGTLVTRSFLPETTTVTTL 132

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42430|ZFP1_WHEAT Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 21/124 (16%)

Query: 282 SKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKS 341
           ++F+C+ C K F SYQALGGH+ SH+ +K                   P P +D+     
Sbjct: 88  AEFKCSVCGKSFSSYQALGGHKTSHR-VK------------------QPSPPSDAAAAPL 128

Query: 342 INNENSADHFFVAD-CDDHRAETSCGAKKK-HECPICLKVFPSGQALGGHKRSHLLGGNE 399
           +     A     A+      A +S GA  + H C IC K FP+GQALGGHKR H  GG  
Sbjct: 129 VALPAVAAILPSAEPATSSTAASSDGATNRVHRCSICQKEFPTGQALGGHKRKHYDGGVG 188

Query: 400 ARNS 403
           A  S
Sbjct: 189 AAAS 192

Potential transcription factor which binds the nonamer motif 5'-CATCCAACG-3'. Possibly involved in regulating transcription of the histone H3 and H4 genes.

Triticum aestivum (taxid: 4565)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	457
255547263	557	hypothetical protein RCOM_1470470 [Ricin	0.978	0.802	0.529	1e-116
2346988	477	ZPT4-4 [Petunia x hybrida]	0.923	0.884	0.444	2e-90
359491301	563	PREDICTED: uncharacterized protein LOC10	0.531	0.431	0.582	1e-73
224098958	509	predicted protein [Populus trichocarpa]	0.886	0.795	0.359	4e-56
356513505	997	PREDICTED: uncharacterized protein LOC10	0.398	0.182	0.605	1e-54
224112130	497	predicted protein [Populus trichocarpa]	0.875	0.804	0.352	1e-53
255542084	519	hypothetical protein RCOM_1621120 [Ricin	0.905	0.797	0.344	2e-50
297733916	351	unnamed protein product [Vitis vinifera]	0.628	0.817	0.424	3e-49
296082991	692	unnamed protein product [Vitis vinifera]	0.890	0.588	0.351	6e-45
15222739	455	C2H2-like zinc finger protein [Arabidops	0.820	0.824	0.325	1e-43

>gi|255547263|ref|XP_002514689.1| hypothetical protein RCOM_1470470 [Ricinus communis] gi|223546293|gb|EEF47795.1| hypothetical protein RCOM_1470470 [Ricinus communis]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 294/555 (52%), Positives = 348/555 (62%), Gaps = 108/555 (19%)

Query: 5   KHVCKFCSKSFPCGRSLGGHMRSHMIT-VTETTDGHHKQLAKKKLPSVN----------- 52
           +HVCKFCSKSF CGRSLGGHMRSHMI  ++   DG   +L KKKLPS+            
Sbjct: 9   QHVCKFCSKSFSCGRSLGGHMRSHMINDISAQADG--TKLTKKKLPSLTNYNNNGADNNN 66

Query: 53  --------NTETNGYGLRENPKKSKRI-AD--SSENNSSQQQQ-QLCGKGFVSWKP---- 96
                   + +  GYGLRENPKK+ RI AD  SSE+ S   +  + CG+ F SWK     
Sbjct: 67  KNNNTTTISADITGYGLRENPKKTWRIVADHHSSEDTSLVDKSCKECGRVFQSWKALFGH 126

Query: 97  MKCN----SEKDRVSNNNTSLED--QDSLTSA-NQKLVTDSQSDNETAAPNRKRRSKRRT 149
           MKC+     EK + SN N SLE+  QDS TSA NQKLV DSQSDNETAAPNR++RSKRRT
Sbjct: 127 MKCHPSLEKEKVKASNINNSLEEEQQDSWTSANNQKLVMDSQSDNETAAPNRRKRSKRRT 186

Query: 150 RYMATPTANSCSISVANNKNNGSSSVSEI-EQEQEEVAMCLMMLSRDVGSRGI-LNSVAE 207
           RYM   TANS S+S ANN  N SSSVSEI +QEQEEVAMCLMMLSRDVG  G  LNSVAE
Sbjct: 187 RYMGG-TANSSSLSFANNI-NASSSVSEIDQQEQEEVAMCLMMLSRDVGQWGSGLNSVAE 244

Query: 208 SSDNNSLDSE-----------KAKV--------IKNL--KKDTELDQAEL---------- 236
           SSDN+S+  E           KA V        +KN   KK+ +L+  +L          
Sbjct: 245 SSDNSSVFLENNNLVSSRNEVKASVCNGTETLKVKNFGDKKNGKLEDDDLRVESRKSEFS 304

Query: 237 --GSSKQNSTSKKNVCNSFDPELRS-----------------------DSLKRSTTDASD 271
             G S++  T    V  S   + R+                       +S KR   D+  
Sbjct: 305 VSGISRKGFTKNDKVKKSPADDERAAENSAVELGKNLSKETDMISSKRNSNKRKYDDSFH 364

Query: 272 AE----FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE 327
            E    + K+S + S+FEC TCNK+FHSYQALGGHRASHKK KGCFA++ DS+ENSIE E
Sbjct: 365 PELKSDYLKNSDRSSRFECTTCNKVFHSYQALGGHRASHKKTKGCFASRSDSNENSIETE 424

Query: 328 HSPDPTADSKL-IKSINNENSADHFFVADCDDHRAETSCGAKKK--HECPICLKVFPSGQ 384
            SPDPTADSKL IKSI NE S D   +    D++AETS GAKK   HECP+C KVFPSGQ
Sbjct: 425 LSPDPTADSKLIIKSIKNEISVDQLAIE--RDNKAETSYGAKKSKGHECPVCFKVFPSGQ 482

Query: 385 ALGGHKRSHLLGG-NEARNSPAI-VLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWI 442
           ALGGHKRSHLL G ++ +N  +I V E+  P IR+FLDLNLPAP EE+SN  +G   WWI
Sbjct: 483 ALGGHKRSHLLAGTDQGKNDRSISVQESMPPPIRDFLDLNLPAPAEEESNGLVGFNPWWI 542

Query: 443 SSSHKHEALVSLISN 457
           +S+HKHE LV LISN
Sbjct: 543 TSNHKHEQLVGLISN 557

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2346988|dbj|BAA21928.1| ZPT4-4 [Petunia x hybrida]

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 226/509 (44%), Positives = 299/509 (58%), Gaps = 87/509 (17%)

Query: 1   DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETN--G 58
           D+E +H+CKFC+KSFPCGRSLGGHMR+H+I ++   D  +++  KKKLPS+  T +    
Sbjct: 4   DQELRHLCKFCNKSFPCGRSLGGHMRTHLINISAFDDHKNEKYTKKKLPSIEATSSKFAD 63

Query: 59  YGLRENPKKSKRIADSSENNSSQQQQ----QLCGKGFVSWKP----MKCNSEKDRVSNNN 110
           YGL+EN KK+ +  +SSE ++  Q Q    + CGK F SWK     MKC+S+K  VS+ N
Sbjct: 64  YGLKENHKKTAKFVESSEEDTLLQNQNKVCKECGKRFQSWKALFGHMKCHSDK-IVSSMN 122

Query: 111 TSLEDQDSLTSAN-----QKLVTDSQSDNETAAPNRKRRSKRRT-RYMATPTANSCSISV 164
           ++++++     AN     ++++ DSQSDNETAAPNRK+RS R+  RYM + T +S     
Sbjct: 123 STVDEESWNNDANYAIDHKQVILDSQSDNETAAPNRKKRSTRKLKRYMTSTTTSS----- 177

Query: 165 ANNKNNGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVIKN 224
                N S  VSEIEQEQEEVAM L++LSRDVG+   LN   E S ++     +  V+  
Sbjct: 178 NVTVVNVSPCVSEIEQEQEEVAMSLIILSRDVGNWIGLNPFTEFSGSSQPHQTEDGVLVK 237

Query: 225 LKKDTELDQAELGSSKQNSTSKKNV--C----------NSFDP----ELRSDSLKR---- 264
           LKK       +    +Q  TSK NV  C          NSF P    ++   S KR    
Sbjct: 238 LKK------VQNEKPEQGETSKSNVKACGVPRNGHKMENSFVPAKENKVEESSKKRNFEL 291

Query: 265 -----STTD--------ASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKG 311
                S T         ASD+E  +DS+K+ KF+C TCNK FHSYQALGGH  SH+K K 
Sbjct: 292 TEGDFSVTSNTKKLKDHASDSELNQDSEKKIKFQCTTCNKSFHSYQALGGHSTSHRKTKD 351

Query: 312 CFATKIDSSENSIEAEHSPDPTADSKLIK-SINNENSADHFFVADCDDHRAETSCGAKKK 370
                              +   DSK+IK S  N ++ D F   D     + +     K 
Sbjct: 352 L-----------------QNQATDSKIIKNSSKNNSTIDEFGEKD----ESFSVSKKLKG 390

Query: 371 HECPICLKVFPSGQALGGHKRSHLLGGNEAR-NSPAIVLENPIPEIRNFLDLNLPAPDEE 429
           +ECP+C K+F SGQALGGHKRSHL+   EA+ N+  +++E PIPEIR+FLDLNLPAP EE
Sbjct: 391 YECPLCFKIFQSGQALGGHKRSHLIA--EAKSNNQVVMIEKPIPEIRDFLDLNLPAPVEE 448

Query: 430 DSNA-HLGLQQWWISSSHKHEALVSLISN 457
           +S + H+G Q WWI SSHKHE LV LISN
Sbjct: 449 ESTSEHVGFQPWWIGSSHKHEQLVGLISN 477

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491301|ref|XP_002281438.2| PREDICTED: uncharacterized protein LOC100241686 [Vitis vinifera]

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/256 (58%), Positives = 182/256 (71%), Gaps = 13/256 (5%)

Query: 210 DNNSLDSEKAKVIKNLKKDTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTT-D 268
           D    +S + ++ K L K+  LDQAEL S K NS +K+   + +DPEL+ +  K++T  D
Sbjct: 313 DGFRFESSENELGKKLVKENGLDQAELFSIKYNS-NKRKFRDFYDPELKVNCSKKTTNND 371

Query: 269 ASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH 328
            +D+E  +DSQKRSKFEC TCNK FHSYQALGGHRASHKKIKGCFA++IDSSENSI+ E 
Sbjct: 372 GTDSEICRDSQKRSKFECTTCNKTFHSYQALGGHRASHKKIKGCFASRIDSSENSIDPEL 431

Query: 329 SPDPTADSKLIKSINNENSAD-----HFFVADCDDHRAETSCGAKKK--HECPICLKVFP 381
           SPDPTADSKL K  NN + +      H   A     +AET  G+KK   HECPICLKVF 
Sbjct: 432 SPDPTADSKLTKPCNNHSPSRSPGPIHGHTASASAVKAETILGSKKSKGHECPICLKVFS 491

Query: 382 SGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWW 441
           SGQALGGHKRSHL+GG++ R S  IV+  P+PEIR+ LDLNLPAP EE+     G + WW
Sbjct: 492 SGQALGGHKRSHLVGGSDTRGSQTIVIPKPLPEIRDLLDLNLPAPAEEEG----GFKAWW 547

Query: 442 ISSSHKHEALVSLISN 457
           + SSHKHE LV +ISN
Sbjct: 548 VGSSHKHEPLVGMISN 563

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098958|ref|XP_002311333.1| predicted protein [Populus trichocarpa] gi|222851153|gb|EEE88700.1| predicted protein [Populus trichocarpa]

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 190/529 (35%), Positives = 257/529 (48%), Gaps = 124/529 (23%)

Query: 7   VCKFCSKSFPCGRSLGGHMRSHM-ITVTETTDGHHKQLAKKKLPSVNNTETN-------- 57
           VCK+C+K +PCG+SLGGH+R H+    T +TD    + AK K+ +  N            
Sbjct: 10  VCKYCNKRYPCGKSLGGHIRIHLNANGTCSTD----EDAKVKMSTTENKSKQISVSEAGG 65

Query: 58  --GYGLRENPKKSKRIADSSENNSSQQQQ--QLCGKGFVSWKP----MKCNSEKDRVSNN 109
             GY LRENPKK+ R    S N +S  +Q  + CGKGF S K     M C+S+       
Sbjct: 66  QFGYALRENPKKTTRFVADSSNTTSLPEQLCKECGKGFQSLKALCGHMACHSK------- 118

Query: 110 NTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSISVANNKN 169
               +DQ   T   + ++ D QSD+ET  P   RRSKR  RY A     S S+S+ N  +
Sbjct: 119 -NFFQDQSGATMKLKGIIMDKQSDSETTDPIEPRRSKR-MRYKAIDVYTS-SLSLTNTAS 175

Query: 170 NGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNS---------------- 213
              SS S+IEQEQEEVA  LMMLS+D G +G  +SVA+SSDNNS                
Sbjct: 176 --LSSTSDIEQEQEEVAKSLMMLSKDSGFKGCFSSVADSSDNNSVVLEGKSSYMKMRINV 233

Query: 214 -------------LDSEKAK------------------VIKNLKKDTELDQAELGSSKQN 242
                        L+ +KA                     +N  K  E D +  G ++  
Sbjct: 234 NDGINFVSSGIESLEMKKATQRGVNSAENDQSENSDSGYFRNGPKKVESDVSVHGFARNG 293

Query: 243 STSKKNV--CNSFDPELRSDSLKRSTT----------DASDAEFYK-------DSQKRSK 283
              K+ V    S+D EL ++S KR +           D    + Y        DSQK  K
Sbjct: 294 EFKKQEVDSVFSYDDELDAESGKRLSMSRHIRTQLGKDFIVDDVYNQGDRALMDSQKGCK 353

Query: 284 FECATCNKIFHSYQ-------ALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADS 336
            E  +C  +  S +       +LGG R SH +I GC  +  +S ENS++ ++ P+P A+S
Sbjct: 354 NE--SCEYLSSSVRNRGSKCVSLGGRRTSHNRINGCSDSIYESGENSVDTDYVPNPIANS 411

Query: 337 -KLIKSINNENSADHFFVADCDDHRAETSCGAK--KKHECPICLKVFPSGQALGGHKRSH 393
            K+I+S + +       +      +AE   G K  K HECP C KVF SGQALGGHKRSH
Sbjct: 412 SKMIQSRSGKTP-----IEKSSSGKAEKKLGLKIEKVHECPFCPKVFRSGQALGGHKRSH 466

Query: 394 LLGGNEARNSPAIVLENPIPEI--RNFLDLNLPAPDEEDSNAHLGLQQW 440
            +G   AR  P +V+E  +PEI  R  +DLNLP   EE+S+   GL  W
Sbjct: 467 FIGA--ARVRP-VVIEQDVPEISTRGLIDLNLPVSMEEESD---GLGPW 509

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513505|ref|XP_003525454.1| PREDICTED: uncharacterized protein LOC100781747 [Glycine max]

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/190 (60%), Positives = 142/190 (74%), Gaps = 8/190 (4%)

Query: 269 ASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH 328
           AS+AE  K+S KR KFEC TCNKIFHSYQALGGHRASHKKIKGCFA++ +SSENSIE + 
Sbjct: 376 ASEAESSKNSNKRGKFECTTCNKIFHSYQALGGHRASHKKIKGCFASRNESSENSIETDL 435

Query: 329 SPDP-TADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKK--HECPICLKVFPSGQA 385
           SPDP   ++KL+K+ ++E   +H   A   +   ET   +KK   HECPICLKVFPSGQA
Sbjct: 436 SPDPIITENKLMKNGDSECVVEHQHGASFHNE-VETVNESKKSKGHECPICLKVFPSGQA 494

Query: 386 LGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGL---QQWWI 442
           LGGHKRSH++GG+E+R+   IVL+ P+ EIR+FLDLNLPA  EE+SN+H      + WWI
Sbjct: 495 LGGHKRSHMVGGSESRSFQTIVLQEPVAEIRDFLDLNLPAATEEESNSHADSNSNRPWWI 554

Query: 443 -SSSHKHEAL 451
              +HK EAL
Sbjct: 555 VEDNHKQEAL 564

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112130|ref|XP_002316093.1| predicted protein [Populus trichocarpa] gi|222865133|gb|EEF02264.1| predicted protein [Populus trichocarpa]

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 184/522 (35%), Positives = 254/522 (48%), Gaps = 122/522 (23%)

Query: 7   VCKFCSKSFPCGRSLGGHMRSHM-ITVTETTDGHHK-QLAK-----KKLPSVNNTETNGY 59
           VCKFC+K +PCG+SLGGH+R H+    T +TD   K Q++K     K++        +GY
Sbjct: 10  VCKFCNKRYPCGKSLGGHIRIHLNANGTSSTDEEAKVQVSKTESNSKQISVPEAVGQSGY 69

Query: 60  GLRENPKKSKRIADSSENNSSQQQQ--QLCGKGFVSWKP----MKCNSEKDRVSNNNTSL 113
            LRENPKK  R    S N +S  ++  + CGKGF S K     M C+S+           
Sbjct: 70  VLRENPKKKSRFVADSSNTTSLPEKVCKECGKGFQSLKALCGHMACHSK--------NYF 121

Query: 114 EDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSISVANNKNNGSS 173
           +DQ   T   +++V+D+QSD+ET  P + RRSKR    M   T +  + S+        S
Sbjct: 122 QDQSGTTEKLKEIVSDNQSDSETTDPRKPRRSKR----MRYKTIDVFTTSL--------S 169

Query: 174 SVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSL------------------- 214
           S S+IEQEQEEVA CLMMLS+D G +G  +S+A+SSDNNS+                   
Sbjct: 170 STSDIEQEQEEVAKCLMMLSKDSGFKGCFSSLADSSDNNSVVLEGKSSSTKTRINVNNAV 229

Query: 215 -----DSEKAKVIKNLKK---DTELDQAELGSSKQNSTSKKNVCN--SFDPELRSDSLKR 264
                  E  +V K++++    TE DQ+E   S       K V +  S     R+D +K+
Sbjct: 230 NFVSSGIESLEVKKSMQRGVISTENDQSENSDSGYFRKGPKKVESDVSVHGFARNDEIKK 289

Query: 265 -------STTDASDAEFYK------------------------------DSQKRSKFECA 287
                  S  DA DAE  K                              DSQKR K E  
Sbjct: 290 YKVEFGSSYDDAIDAESGKRLSRFRRVRTQLGKDFIEEDVYDQADRASMDSQKRCKNESY 349

Query: 288 TCNKIFHSYQA----LGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADS-KLIKSI 342
              +   S +     LGG RASH K  GC  +  +S ENS++ ++ P+P  +S ++I+S 
Sbjct: 350 ---EFLSSRRGKCVPLGGRRASHNKTNGCSDSIYESGENSVDTDYVPNPIPNSSRMIQSR 406

Query: 343 NNENSADHFFVADCDDHRAETSCGAKKK--HECPICLKVFPSGQALGGHKRSHLLGGNEA 400
           + +   +     +     AE + G KK   HECP C KVF SGQALGGHKRSH  G    
Sbjct: 407 SGKTPIEQNSSGN-----AEKNLGLKKGKLHECPFCPKVFRSGQALGGHKRSHFAGAARD 461

Query: 401 RNSPAIVLENPIPEI--RNFLDLNLPAPDEEDSNAHLGLQQW 440
           R    +V++  +PEI  R  +DLNLP   EE++    G   W
Sbjct: 462 R---TVVIKQDVPEISMRGLIDLNLPVSVEEEAG---GFGPW 497

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542084|ref|XP_002512106.1| hypothetical protein RCOM_1621120 [Ricinus communis] gi|223549286|gb|EEF50775.1| hypothetical protein RCOM_1621120 [Ricinus communis]

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 182/529 (34%), Positives = 251/529 (47%), Gaps = 115/529 (21%)

Query: 7   VCKFCSKSFPCGRSLGGHMRSHMITV-------TETTDGHHKQLAKKKLPSVNNTET--- 56
           +CKFC+K +PCG+SLGGH+R H+          T+  +   K    K   + N + +   
Sbjct: 11  ICKFCNKRYPCGKSLGGHIRIHLNGNGNGYGNSTDIEEEDMKLNTSKSFAAANVSNSKQE 70

Query: 57  --------NGYGLRENPKKSKR-IADSSENNSSQQQQ-QLCGKGFVSWKP----MKCNSE 102
                   +GYGLRENPKK+KR +ADSS+ N  Q++  + CGKGF S K     M C+S+
Sbjct: 71  LELEAGARSGYGLRENPKKTKRFMADSSKGNLLQEKVCKECGKGFQSLKALCGHMACHSK 130

Query: 103 KDRVSNNNTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSI 162
                    S EDQ   T   +  V DSQSD ET++   KRR  +R RY A    +S S+
Sbjct: 131 --------NSFEDQSETTEKLKDQVFDSQSDTETSSAPSKRRRSKRMRYKAIGVYSS-SL 181

Query: 163 SVANNKNNGS-SSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNS-------- 213
           S+ N    GS SS S++EQEQEEVA CLMMLS+D G +G  +SVA+SSDN+         
Sbjct: 182 SLVN----GSLSSASDVEQEQEEVAKCLMMLSKDSGFKGCFSSVADSSDNSVVLETKSSS 237

Query: 214 --------------------LDSEKAK------------------VIKNLKKDTELDQAE 235
                               L+ +KAK                    KN  K  E D + 
Sbjct: 238 PKLRISVKNGVSCVYNGNGILEIKKAKQHEVMSVGNEYSENSDSGYFKNGPKKVESDISV 297

Query: 236 LGSSKQNSTSKKNVC------NSFDPEL--RSDSLKRSTTDAS-------------DAEF 274
            G +  +   K+ +       + F PEL  R   ++R  T+                A F
Sbjct: 298 HGFTGIDEFKKQKIEFGSRFEDGFSPELGKRLSRVRRIKTELGKDLIEEDGYGETDGASF 357

Query: 275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPT- 333
             DS+KR K           S   +G  R  H++  GC  +   S ENSIE + +P P  
Sbjct: 358 KYDSRKRDKRNDPELLSNIASKTCIGVQRTRHRRTNGCSESVYGSGENSIETDCAPSPLP 417

Query: 334 ADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSH 393
           + +K  +S N + + +       +    + S    K HECP C KVF SGQALGGHKRSH
Sbjct: 418 SHNKKSQSCNGKTAIEQKLSGSVEK---KLSLRKGKIHECPFCFKVFRSGQALGGHKRSH 474

Query: 394 LLGGNEARNSPAIVLENPIPEIR--NFLDLNLPAPDEEDSNAHLGLQQW 440
            +GG + R    +V+   + EI     +DLNLPAP EED+N +  +  W
Sbjct: 475 FVGGAQDR---TLVINQQVSEISMPALIDLNLPAPVEEDANGYY-IPSW 519

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297733916|emb|CBI15163.3| unnamed protein product [Vitis vinifera]

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/365 (42%), Positives = 204/365 (55%), Gaps = 78/365 (21%)

Query: 103 KDRVSNNNTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSI 162
           K ++S+ + +  + DS TSANQKLV DSQSD ETA PNRK+RS+RRTRYMAT T++    
Sbjct: 55  KTKLSSLHKAATNPDSWTSANQKLVMDSQSDTETAVPNRKKRSRRRTRYMATATSS---- 110

Query: 163 SVANNKNNGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVI 222
             + +  N SSSVSEIEQEQEEVA+ LMMLSRD G+ G LNSV +              +
Sbjct: 111 --SFSFANASSSVSEIEQEQEEVAISLMMLSRDSGNWGGLNSVVK--------------L 154

Query: 223 KNLKKDTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAEFYKDSQKRS 282
           K L KD +                      F+P         S  D+ D +FY    K+S
Sbjct: 155 KKLIKDEK----------------------FNP---------SALDSEDFQFY---CKQS 180

Query: 283 KFECATCNK---IFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLI 339
           +F  +  ++     +  + L  ++++  K+  C     ++ E +         T  SKL 
Sbjct: 181 EFGASGNSRNDSKLNKSEVLETNKSNKLKVN-CSKKTTNNDELA---------TKRSKLT 230

Query: 340 KSINNENSAD-----HFFVADCDDHRAETSCGAKKK--HECPICLKVFPSGQALGGHKRS 392
           K  NN + +      H   A     +AET  G+KK   HECPICLKVF SGQALGGHKRS
Sbjct: 231 KPCNNHSPSRSPGPIHGHTASASAVKAETILGSKKSKGHECPICLKVFSSGQALGGHKRS 290

Query: 393 HLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEEDSNAHLGLQQWWISSSHKHEALV 452
           HL+GG++ R S  IV+  P+PEIR+ LDLNLPAP EE+     G + WW+ SSHKHE LV
Sbjct: 291 HLVGGSDTRGSQTIVIPKPLPEIRDLLDLNLPAPAEEEG----GFKAWWVGSSHKHEPLV 346

Query: 453 SLISN 457
            +ISN
Sbjct: 347 GMISN 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082991|emb|CBI22292.3| unnamed protein product [Vitis vinifera]

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 166/472 (35%), Positives = 234/472 (49%), Gaps = 65/472 (13%)

Query: 1   DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGH--HKQLAKKKLPSVNNTETNG 58
           ++E KH CK C K F  GRSLGGHMR HM       D +     +  +     +     G
Sbjct: 4   NQEQKHECKVCKKRFFSGRSLGGHMRCHMAMNPAPRDENPIESDIGFEDGGDGDGGGQTG 63

Query: 59  YGLRENPKKSKRIADSSENNSSQQQQ---------QLCGKGFVSWKPMKCNSEKDRVSNN 109
           YGLRENPKKS R++ S++    Q+++         ++CGKGF S + +     +      
Sbjct: 64  YGLRENPKKSWRLSGSNQTAPKQEEEQEREQDHICKVCGKGFNSSRAV-FGHMRHHSRQE 122

Query: 110 NTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSISVANNKN 169
           N   E     +S    L    QS +ET+ P R++RS+R  +  + P+ ++          
Sbjct: 123 NLCRECGKGFSS----LRAFCQSQDETSCPTRRKRSQR-YKMTSNPSFSN---------F 168

Query: 170 NGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVIKN--LKK 227
           N SSSV+  E E EE A+CLM+LSR V S     SV ESSDNNS+ +E     +N  + K
Sbjct: 169 NDSSSVTLSEPELEEGALCLMLLSRAVRSWEEFYSVPESSDNNSVIAEAKSSHQNTPIIK 228

Query: 228 DTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAEFYKDSQKRSKFECA 287
           D E         K NS SK+  C   +P+L  +   + +  A +   YK         C+
Sbjct: 229 DEEY-------VKHNS-SKRAKCEPSEPDLEGNFCNKRSPAAQNKRIYK---------CS 271

Query: 288 TCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS-PDPTADSKLIKSINNEN 346
            C+KIF S++ LGGHR        C A+K  S   SI+     PD  A+SKL K   NEN
Sbjct: 272 ICSKIFQSHRVLGGHRMR------CLASKSKSCGKSIQTNKILPDGKANSKLEKREYNEN 325

Query: 347 S----ADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARN 402
           S    A      +C+  R+       K +EC IC KVF SGQALGGHKR+H  G +E   
Sbjct: 326 SIGQEAARVSGMNCELKRS-------KDYECEICFKVFASGQALGGHKRAHYAGSSETGE 378

Query: 403 SPAIVLENPIPEIRNFLDLNLP-APDEEDSNAHLGLQQWWISSS-HKHEALV 452
               +++    ++ +  DLNLP AP+E  +N H+G + W      H+HE+LV
Sbjct: 379 EGTTLVQQEHSDVSDIFDLNLPIAPEEGGANEHVGFKPWCFRGGHHEHESLV 430

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222739|ref|NP_173983.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|9797768|gb|AAF98586.1|AC013427_29 Contains similarity to C2H2 zinc finger protein (PEThy;ZPT4-2) from Petunia hybrida gb|AB000456 and contains three Zinc finger (C2H2 type) PF|00096 motifs [Arabidopsis thaliana] gi|225897972|dbj|BAH30318.1| hypothetical protein [Arabidopsis thaliana] gi|332192588|gb|AEE30709.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 164/504 (32%), Positives = 236/504 (46%), Gaps = 129/504 (25%)

Query: 2   REFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGL 61
           +E K VCKFCSK FPCG+SLGGH+R+HM     + D    +  K K+   N  +++ YGL
Sbjct: 5   KERKFVCKFCSKRFPCGKSLGGHIRTHM--NENSADSDEDEADKLKMIDENGGQSS-YGL 61

Query: 62  RENPKKSKRIADSSE-----------NNSSQQQQQLCGKGFVSWKP----MKCNSEKDRV 106
           RENPKK+KR  D  +                ++ + CGKGFVS K     M C+SE+   
Sbjct: 62  RENPKKNKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGHMACHSER--- 118

Query: 107 SNNNTSLEDQDSLTSANQKLVTDSQSDNETAAPNRKRRSKRRTRYMATPTANSCSI---- 162
                            +K+V DSQSD E ++   +RRSKR    +  P   +  +    
Sbjct: 119 -----------------EKIVMDSQSDTEASSSPIRRRSKR---VVVKPHHKAAFVVGGN 158

Query: 163 SVANNKNNGSSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSL-------D 215
            + N   + SS  SEIE EQEE+A  LMMLSRD   +   NS+AESSDNNS+        
Sbjct: 159 GIMNQSISASSDASEIEPEQEEMARSLMMLSRDSSFKKGHNSLAESSDNNSVILETKSSS 218

Query: 216 SEKAKV--IKNL----KKDTELDQAELGSSKQN-----------STSKKNVCNSFDPELR 258
            E+ K+  +KN+    KK+  +   ++ S ++N           S   +N     D ++ 
Sbjct: 219 GEQVKMFNVKNVEELCKKNKLVVDNQMRSGEENGDVHYDSDNSDSGYFRNGPKKLDSDVS 278

Query: 259 SDSLKRSTTDASDA-------------------EFYKDSQKR---------SKFECATCN 290
            D   R+ T                        E+YK+             +K++     
Sbjct: 279 VDGFFRNKTIMGSGSGFNSSPTKQDRDMNRFRKEWYKEGGSGSGSGSGRSSTKYDLRKSK 338

Query: 291 KIFHSYQALGGHRASHKKIKGCFATKI-DSSENSIEAEHSPDPTADSKLIKSINNENSAD 349
           + F S+          KKIK  F   + DS E+S+E     D  AD+     I++++   
Sbjct: 339 RGFPSH--------GRKKIKYEFTESVYDSGEHSLET----DSCADTNRTIKIHSKSPM- 385

Query: 350 HFFVADCDDHRAETSCGAKKK---HECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAI 406
                       + + GAKKK   HECPIC +VF SGQALGGHKRSH +G  E R    +
Sbjct: 386 -----------VKKANGAKKKSKGHECPICFRVFKSGQALGGHKRSHFIGNQEHR---TL 431

Query: 407 VLENPIP-EIRNFLDLNLPAPDEE 429
           V+++ +  E+   +DLNLPAP +E
Sbjct: 432 VIQHQVAHEMHTLIDLNLPAPIDE 455

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	457
TAIR|locus:2197890	455	AT1G26610 "AT1G26610" [Arabido	0.568	0.571	0.296	1.4e-33
TAIR|locus:2055583	314	AT2G45120 "AT2G45120" [Arabido	0.157	0.229	0.5	6.4e-33
TAIR|locus:2205649	267	AT1G02030 "AT1G02030" [Arabido	0.150	0.258	0.454	8.4e-30
TAIR|locus:2197915	361	AT1G26590 "AT1G26590" [Arabido	0.448	0.567	0.285	1.7e-19
TAIR|locus:2205583	324	AT1G02040 "AT1G02040" [Arabido	0.223	0.314	0.462	5.5e-18
TAIR|locus:2103311	288	AT3G60580 "AT3G60580" [Arabido	0.444	0.704	0.306	2e-17
TAIR|locus:2161168	304	AT5G61470 "AT5G61470" [Arabido	0.210	0.315	0.333	2e-16
TAIR|locus:2059672	270	DAZ1 "AT2G17180" [Arabidopsis	0.225	0.381	0.330	4.3e-16
TAIR|locus:2122118	284	DAZ2 "AT4G35280" [Arabidopsis	0.118	0.190	0.472	2.6e-15
TAIR|locus:2156435	493	AT5G56200 "AT5G56200" [Arabido	0.229	0.212	0.365	3.6e-15

TAIR|locus:2197890 AT1G26610 "AT1G26610" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
 Identities = 90/304 (29%), Positives = 129/304 (42%)

Query:     2 REFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGL 61
             +E K VCKFCSK FPCG+SLGGH+R+HM     + D    +  K K+   N  +++ YGL
Sbjct:     5 KERKFVCKFCSKRFPCGKSLGGHIRTHMNE--NSADSDEDEADKLKMIDENGGQSS-YGL 61

Query:    62 RENPKKSKRIADXXXXXXXXXXXXL-----------CGKGFVSWKPMKCNSEKDRVSNNN 110
             RENPKK+KR  D                        CGKGFVS K + C           
Sbjct:    62 RENPKKNKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKAL-CGHM-------- 112

Query:   111 TSLEDQDSLTSANQKLVTDSQSDNETAAPNXXXXXXXXXXYMATPTANSCSI----SVAN 166
                    +  S  +K+V DSQSD E ++             +  P   +  +     + N
Sbjct:   113 -------ACHSEREKIVMDSQSDTEASS---SPIRRRSKRVVVKPHHKAAFVVGGNGIMN 162

Query:   167 NKNNGXXXXXXXXXXXXXXAMCLMMLSRDVGSRGILNSVAESSDNNSL----DSEKAKVI 222
                +               A  LMMLSRD   +   NS+AESSDNNS+     S   + +
Sbjct:   163 QSISASSDASEIEPEQEEMARSLMMLSRDSSFKKGHNSLAESSDNNSVILETKSSSGEQV 222

Query:   223 K--NLKKDTEL-DQAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAEFYKDSQ 279
             K  N+K   EL  + +L    Q  + ++N    +D +       R+     D++   D  
Sbjct:   223 KMFNVKNVEELCKKNKLVVDNQMRSGEENGDVHYDSDNSDSGYFRNGPKKLDSDVSVDGF 282

Query:   280 KRSK 283
              R+K
Sbjct:   283 FRNK 286

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2055583 AT2G45120 "AT2G45120" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 6.4e-33, Sum P(3) = 6.4e-33
 Identities = 38/76 (50%), Positives = 48/76 (63%)

Query:   368 KKKHECPICLKVFPSGQALGGHKRSH--LLGGNEARNSPAIV-LENPIPEIRNFLDLNLP 424
             KK HECPIC +VF SGQALGGHKRSH   +G     +   IV +E  +   +  +DLNLP
Sbjct:   240 KKVHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLP 299

Query:   425 APDEEDSNAHLGLQQW 440
             AP+EED  + L   +W
Sbjct:   300 APNEEDETS-LVFDEW 314

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2205649 AT1G02030 "AT1G02030" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 8.4e-30, Sum P(3) = 8.4e-30
 Identities = 35/77 (45%), Positives = 43/77 (55%)

Query:   357 DDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIR 416
             D+ + +        HECPIC KVF SGQALGGHKRSH    NE      I++        
Sbjct:   195 DELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASANNEFTRRSGIII-------- 246

Query:   417 NFLDLNLPAPDEEDSNA 433
             + +DLNLPAP EE+  A
Sbjct:   247 SLIDLNLPAPSEEEEMA 263

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2197915 AT1G26590 "AT1G26590" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
 Identities = 69/242 (28%), Positives = 113/242 (46%)

Query:   200 GILNSVAESSDNNSLDSEKAKVIKNLKKDTELDQA--ELGSSKQNSTSKKNVCNSFDPEL 257
             G  N +  SSD++S    +  V+ +L + ++ + A  E  SS  +     NV N+ D + 
Sbjct:   146 GAYNLMMLSSDSSSFKKRRNMVMNSLGESSDNNSAIVENKSSSGDEFKIMNVKNAVDDQW 205

Query:   258 RS---DSLKRSTTDASDAEFYKDSQKRSKFECATC-NKIFHS--YQALGGHRASHKKIKG 311
             RS   D +    +D SD++++ +   +S+ + +   N  F S    +L   R S++   G
Sbjct:   206 RSADDDGVSLCDSDGSDSDYFMNGPSKSESDISVDRNTGFGSGFNNSLIRFRNSNE---G 262

Query:   312 CFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKK- 370
                 ++  S+ ++ + +  D  AD+         NS  H    D      +   G K K 
Sbjct:   263 GTKYELSKSKRALFS-YETDSCADT---------NSKIHHRFKDSKSSMVKKEGGEKVKS 312

Query:   371 --HECPICLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDE 428
               HECPIC ++F SGQALGGHKRSH +  + A             E+RN +DL LP  D 
Sbjct:   313 KGHECPICFRMFKSGQALGGHKRSHSIANHAA-------------EMRNQIDLYLPVSDT 359

Query:   429 ED 430
             ++
Sbjct:   360 DE 361

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2205583 AT1G02040 "AT1G02040" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 5.5e-18, P = 5.5e-18
 Identities = 56/121 (46%), Positives = 73/121 (60%)

Query:   279 QKRSK-FECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSK 337
             QK ++ F+C  C K+F S+QALGGHRASHKK+KGCFA++ D  E   E E+  D   D  
Sbjct:   144 QKTAQVFQCKACKKVFTSHQALGGHRASHKKVKGCFASQ-DKEEEE-EEEYKED---DD- 197

Query:   338 LIKSINNENSADHFFVADCDDHRAETSCGAKKK---HECPICLKVFPSGQALGGHKRSHL 394
                  +N+   D     + D+    T+  A+K+   HEC IC +VF SGQALGGHKR H 
Sbjct:   198 -----DNDEDEDE----EEDEEDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRCHW 248

Query:   395 L 395
             L
Sbjct:   249 L 249

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2103311 AT3G60580 "AT3G60580" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
 Identities = 72/235 (30%), Positives = 109/235 (46%)

Query:   210 DNNSLDSEKAKVIKNLKKDTELDQAELGS--SKQNSTSKKNVCNSFDPELRSDSLKRSTT 267
             D  S +SE ++ + NL +       +L S  +K+  TS+       D E    S   +TT
Sbjct:    65 DGES-ESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQEPPHSSASDTTT 123

Query:   268 DASDAEFY-----KDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFAT----KID 318
             +  D  F      +D  K++K       +I    ++ G ++ +    KG +      K+ 
Sbjct:   124 E-EDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKVF 182

Query:   319 SSENSI---EAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI 375
              S  ++    A H  +  +++K  +   +E   D+  V             AK+ HECPI
Sbjct:   183 KSYQALGGHRASHKKNRVSNNKTEQ--RSETEYDNVVVV------------AKRIHECPI 228

Query:   376 CLKVFPSGQALGGHKRSHLLGGNEARNSPAIVLENPIPEIRNFLDLNLPAPDEED 430
             CL+VF SGQALGGHKRSH +G N + N    V  N   + R  +DLNLPAP EED
Sbjct:   229 CLRVFASGQALGGHKRSHGVG-NLSVNQQRRVHRNESVKQR-MIDLNLPAPTEED 281

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2161168 AT5G61470 "AT5G61470" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
 Identities = 35/105 (33%), Positives = 51/105 (48%)

Query:   203 NSVAESSDNNSLDSEKAKVIKNLKKDTELDQAELGSSKQNSTSKKNVCNSFDPELRSDSL 262
             N +   SD N  DS+   V+++  +D E D       K  ++  +N+    D +   D  
Sbjct:   156 NYIEIDSDENHEDSDDEYVVEDEDEDNEDDDV-----KSLTSDVENLIGDSDED--DDDY 208

Query:   263 KRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHK 307
                  +A      K  +K+SK+ C TC K+  SYQALGGHR SHK
Sbjct:   209 --GDENAYYGGKRKRGKKQSKYTCDTCGKVLRSYQALGGHRTSHK 251

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2059672 DAZ1 "AT2G17180" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
 Identities = 37/112 (33%), Positives = 56/112 (50%)

Query:   242 NSTSKKNVCNSFDPELRSDSLKRSTTDASDAEF-YKDSQKRSKFECATCNKIFHSYQALG 300
             NS +  +  +S+DP     ++       ++ +   + S+   +FEC  C K+F S+QALG
Sbjct:   106 NSNAASS-SSSWDPSEEEHNIASCLLMMANGDVPTRSSEVEERFECDGCKKVFGSHQALG 164

Query:   301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPT--ADSKLIKSINNENSADH 350
             GHRA+HK +KGCFA K     N  E    P P    D    KS+   +  +H
Sbjct:   165 GHRATHKDVKGCFANK-----NITEDPPPPPPQEIVDQDKGKSVKLVSGMNH 211

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:2122118 DAZ2 "AT4G35280" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
 Identities = 26/55 (47%), Positives = 33/55 (60%)

Query:   278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFA-TKIDSSENSIEAEHSPD 331
             S    +FEC  C K+F S+QALGGHRASHK +KGCFA T +     ++      D
Sbjct:   156 SSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHD 210

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2156435 AT5G56200 "AT5G56200" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
 Identities = 45/123 (36%), Positives = 65/123 (52%)

Query:   189 LMMLSRDVGSRGILNSVAESSDNNSLDSEKAKVIKNLKKDTE-LDQAELGSSKQNSTSKK 247
             L+ L+    +   LN VAE+S + S++ +  +++K  KK  + L + E    K++STS  
Sbjct:   263 LLFLATTAEAAANLN-VAETSASRSVEEKYLEMVKKRKKKQKRLSEME----KESSTSTH 317

Query:   248 NVCNSFDPELRSDSLKRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHK 307
             +     D +L  D +         AE    +  R K  C TCNK F SYQALGGHRASH 
Sbjct:   318 H-----DHQL--DQVV-----VVAAEEGGGAGAREKHVCVTCNKSFSSYQALGGHRASHN 365

Query:   308 KIK 310
             K+K
Sbjct:   366 KVK 368

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	457
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	6e-06
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-05
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	8e-04

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 15/23 (65%), Positives = 17/23 (73%)

Query: 371 HECPICLKVFPSGQALGGHKRSH 393
           H C +C K F S QALGGHK+SH
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSH 24

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 284 FECATCNKIFHSYQALGGHRASHKK 308
             C  C K F S QALGGH+ SH  
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSHCS 26

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 6  HVCKFCSKSFPCGRSLGGHMRSHM 29
          H C  C K+F   ++LGGH +SH 
Sbjct: 2  HTCGVCGKTFSSLQALGGHKKSHC 25

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	457
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.88
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.77
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.68
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.61
KOG3576	267	consensus Ovo and related transcription factors [T	99.24
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.2
KOG3608	467	consensus Zn finger proteins [General function pre	99.15
KOG3608	467	consensus Zn finger proteins [General function pre	98.99
KOG3576	267	consensus Ovo and related transcription factors [T	98.98
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.92
PHA02768	55	hypothetical protein; Provisional	98.64
PHA00733	128	hypothetical protein	98.59
PHA02768	55	hypothetical protein; Provisional	98.22
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.17
PLN03086	567	PRLI-interacting factor K; Provisional	98.03
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.96
PHA00733	128	hypothetical protein	97.92
PHA00732	79	hypothetical protein	97.91
PLN03086	567	PRLI-interacting factor K; Provisional	97.79
KOG3993	500	consensus Transcription factor (contains Zn finger	97.7
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.67
PHA00616	44	hypothetical protein	97.64
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.39
PHA00616	44	hypothetical protein	97.35
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.24
PHA00732	79	hypothetical protein	97.24
KOG3993	500	consensus Transcription factor (contains Zn finger	97.12
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.11
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.08
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.98
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.83
smart00355	26	ZnF_C2H2 zinc finger.	96.71
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.68
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.55
smart00355	26	ZnF_C2H2 zinc finger.	96.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.21
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.17
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.08
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.33
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.17
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.78
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.18
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.82
PRK04860	160	hypothetical protein; Provisional	92.64
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	92.57
PRK04860	160	hypothetical protein; Provisional	92.25
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.8
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	91.61
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.41
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.56
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	89.94
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	89.78
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.16
COG5048	467	FOG: Zn-finger [General function prediction only]	87.66
KOG2893	341	consensus Zn finger protein [General function pred	87.08
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.0
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	86.77
KOG1146	1406	consensus Homeobox protein [General function predi	84.79
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.61
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.34
COG5048	467	FOG: Zn-finger [General function prediction only]	81.05

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.88  E-value=1.2e-23  Score=200.78  Aligned_cols=80  Identities=33%  Similarity=0.492  Sum_probs=75.9

Q ss_pred             CccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCcc
Q 038961          282 SKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRA  361 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~  361 (457)
                      -+++|.+|||.|.+..-|++|+|+|+|            ||||.|..|+++|+..        +||+.|+++        
T Consensus       186 l~c~C~iCGKaFSRPWLLQGHiRTHTG------------EKPF~C~hC~kAFADR--------SNLRAHmQT--------  237 (279)
T KOG2462|consen  186 LPCECGICGKAFSRPWLLQGHIRTHTG------------EKPFSCPHCGKAFADR--------SNLRAHMQT--------  237 (279)
T ss_pred             CCcccccccccccchHHhhcccccccC------------CCCccCCcccchhcch--------HHHHHHHHh--------
Confidence            578999999999999999999999999            9999999999999855        999999999        


Q ss_pred             ccccCCCccccCCCCCCCCCCchhhhhhhhh
Q 038961          362 ETSCGAKKKHECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       362 ~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                         |.+.|+|+|..|+|+|+..+.|.+|...
T Consensus       238 ---HS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  238 ---HSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ---hcCCccccCcchhhHHHHHHHHHHhhhh
Confidence               9999999999999999999999999754

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.77  E-value=8.7e-19  Score=186.89  Aligned_cols=90  Identities=28%  Similarity=0.442  Sum_probs=77.7

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCc
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHR  360 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~  360 (457)
                      -.|.+|-+|-++....++|+.|.|+|+|            ||||+|.+|++.|+..        .+|+.|+-+     |+
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtG------------ERPFkCKiCgRAFtTk--------GNLkaH~~v-----Hk  657 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTG------------ERPFKCKICGRAFTTK--------GNLKAHMSV-----HK  657 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccC------------cCccccccccchhccc--------cchhhcccc-----cc
Confidence            4578999999999999999999999999            9999999988888754        999999998     22


Q ss_pred             cccccCCCccccCC---CCCCCCCCchhhhhhhhhccCCC
Q 038961          361 AETSCGAKKKHECP---ICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       361 ~~~~H~geKp~~C~---~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      +.  +.-.-+|.|+   +|-+-|...-.|..|+|+|.++.
T Consensus       658 a~--p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~  695 (958)
T KOG1074|consen  658 AK--PPARVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQ  695 (958)
T ss_pred             cC--ccccccccCCchhhhcccccccccccceEEeecCCC
Confidence            22  2223579999   99999999999999999999653

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.68  E-value=1.9e-17  Score=158.45  Aligned_cols=102  Identities=21%  Similarity=0.307  Sum_probs=83.4

Q ss_pred             cCCCCChhhhhhcC---CCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhcc
Q 038961          266 TTDASDAEFYKDSQ---KRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSI  342 (457)
Q Consensus       266 ~~~~~~~~~~~~h~---~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~  342 (457)
                      .....+..|.+.|-   ..+.+.|.+|+|+|.+-.+|..|+|+|+-              +++|.+|||.|...      
T Consensus       141 sT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l--------------~c~C~iCGKaFSRP------  200 (279)
T KOG2462|consen  141 STSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL--------------PCECGICGKAFSRP------  200 (279)
T ss_pred             ccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC--------------Ccccccccccccch------
Confidence            33444555555543   46778888888888888888888888885              67899987777655      


Q ss_pred             CcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCCCCC
Q 038961          343 NNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGNEA  400 (457)
Q Consensus       343 ~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  400 (457)
                        +-|+.|+|+           |||||||.|+.|+|+|+.+++|+.||++|.+.....
T Consensus       201 --WLLQGHiRT-----------HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  201 --WLLQGHIRT-----------HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             --HHhhccccc-----------ccCCCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence              889999999           999999999999999999999999999999865443

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.61  E-value=3.7e-16  Score=167.05  Aligned_cols=56  Identities=16%  Similarity=0.153  Sum_probs=48.8

Q ss_pred             ccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          324 IEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       324 ~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      ..|.+|++.|..+        +.|..|+|+           |+|+|||.|.+|++.|..+.+|+.||.+|.....
T Consensus       880 h~C~vCgk~FsSS--------sALqiH~rT-----------Htg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  880 HVCNVCGKQFSSS--------AALEIHMRT-----------HTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             hhhccchhcccch--------HHHHHhhhc-----------CCCCCCccchhhhhhhhhhhhhhhhhccccccCC
Confidence            4677777666644        999999999           9999999999999999999999999999987433

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.24  E-value=7.5e-13  Score=121.45  Aligned_cols=85  Identities=20%  Similarity=0.319  Sum_probs=69.6

Q ss_pred             CCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCC
Q 038961          279 QKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDD  358 (457)
Q Consensus       279 ~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~  358 (457)
                      .+...|.|.+|+|.|....-|.+|++.|..            .|.|-|..|++.|...        -+|++|+|+     
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~------------vkr~lct~cgkgfndt--------fdlkrh~rt-----  167 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSD------------VKRHLCTFCGKGFNDT--------FDLKRHTRT-----  167 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccH------------HHHHHHhhccCcccch--------hhhhhhhcc-----
Confidence            345568899999999888888889888888            7788888888777644        778889988     


Q ss_pred             CccccccCCCccccCCCCCCCCCCchhhhhhhh-hcc
Q 038961          359 HRAETSCGAKKKHECPICLKVFPSGQALGGHKR-SHL  394 (457)
Q Consensus       359 ~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r-~H~  394 (457)
                            |+|.+||+|..|+|+|.+...|..|.+ +|-
T Consensus       168 ------htgvrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  168 ------HTGVRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             ------ccCccccchhhhhHHHHhhccHHHHHHHHcC
Confidence                  899999999999999998888888854 453

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.20  E-value=2.6e-12  Score=135.80  Aligned_cols=82  Identities=20%  Similarity=0.407  Sum_probs=74.8

Q ss_pred             CCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCC
Q 038961          279 QKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDD  358 (457)
Q Consensus       279 ~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~  358 (457)
                      +.+.+|.|+.|.|+|...+.|.+|.--|+|            .|||+|.+|.|.|      +..  .+|..|+|.     
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsG------------qRPyqC~iCkKAF------KHK--HHLtEHkRL-----  944 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSG------------QRPYQCIICKKAF------KHK--HHLTEHKRL-----  944 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcC------------CCCcccchhhHhh------hhh--hhhhhhhhh-----
Confidence            456789999999999999999999999999            9999999965554      444  999999999     


Q ss_pred             CccccccCCCccccCCCCCCCCCCchhhhhhhh
Q 038961          359 HRAETSCGAKKKHECPICLKVFPSGQALGGHKR  391 (457)
Q Consensus       359 ~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r  391 (457)
                            |.|||||.|+.|+|+|.....+..||.
T Consensus       945 ------HSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  945 ------HSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             ------ccCCCcchhhhhhhhcccccchHhhhc
Confidence                  999999999999999999999999984

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.15  E-value=5.4e-12  Score=124.12  Aligned_cols=92  Identities=22%  Similarity=0.393  Sum_probs=72.5

Q ss_pred             hhh-hcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhc
Q 038961          274 FYK-DSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFF  352 (457)
Q Consensus       274 ~~~-~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~  352 (457)
                      |++ .|+..+||+|+.|.+.|...+.|.+|..+|+.             -.|+|+..+    |...|+..  ..+.+|++
T Consensus       282 H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~-------------~~y~C~h~~----C~~s~r~~--~q~~~H~~  342 (467)
T KOG3608|consen  282 HIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK-------------TVYQCEHPD----CHYSVRTY--TQMRRHFL  342 (467)
T ss_pred             HHHhhhccCCCccccchhhhhccHHHHHHHHHhccc-------------cceecCCCC----CcHHHHHH--HHHHHHHH
Confidence            544 38889999999999999999999999999985             468888733    23333333  77888988


Q ss_pred             cccCCCCccccccCCC--ccccCCCCCCCCCCchhhhhhh-hhcc
Q 038961          353 VADCDDHRAETSCGAK--KKHECPICLKVFPSGQALGGHK-RSHL  394 (457)
Q Consensus       353 ~~~~~~~~~~~~H~ge--Kp~~C~~Cgk~F~~~~~L~~H~-r~H~  394 (457)
                      -          +|.|.  -+|.|..|.|.|.++.+|..|+ |.|.
T Consensus       343 e----------vhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  343 E----------VHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             H----------hccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            6          15554  5799999999999999999994 5554

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.99  E-value=4.7e-11  Score=117.57  Aligned_cols=84  Identities=18%  Similarity=0.282  Sum_probs=71.6

Q ss_pred             CccccCCCCCccCCchhhhhhccc-cCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCc
Q 038961          282 SKFECATCNKIFHSYQALGGHRAS-HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHR  360 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~-H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~  360 (457)
                      .-|+|+.|.-+....+.|..|++. |..            .|||+|+.|.+.|...        +.|.+|..+       
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~------------dkpfKCd~Cd~~c~~e--------sdL~kH~~~-------  314 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSK------------DKPFKCDECDTRCVRE--------SDLAKHVQV-------  314 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhcc------------CCCccccchhhhhccH--------HHHHHHHHh-------
Confidence            459999999999999999999874 788            8999999977665433        899999998       


Q ss_pred             cccccCCCccccCCC--CCCCCCCchhhhhhhhhccCCC
Q 038961          361 AETSCGAKKKHECPI--CLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       361 ~~~~H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                          |. +-.|.|..  |...|++...|.+|++-|..+.
T Consensus       315 ----HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  315 ----HS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             ----cc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCC
Confidence                87 67799988  9999999999999988776443

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.98  E-value=5.9e-11  Score=109.08  Aligned_cols=115  Identities=14%  Similarity=0.055  Sum_probs=87.7

Q ss_pred             cccccCCCCChhhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhc
Q 038961          262 LKRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKS  341 (457)
Q Consensus       262 ~~~~~~~~~~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~  341 (457)
                      .|.|.-++.+..|++-|...+.|.|..|||.|.....|++|+|+|+|            .+||+|..|+++|+..     
T Consensus       124 gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtg------------vrpykc~~c~kaftqr-----  186 (267)
T KOG3576|consen  124 GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG------------VRPYKCSLCEKAFTQR-----  186 (267)
T ss_pred             hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccC------------ccccchhhhhHHHHhh-----
Confidence            44455566677899999999999999999999999999999999999            8999999987777632     


Q ss_pred             cCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          342 INNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       342 ~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                         ..|..|.+..+.-.+.-.-.-..+|.|.|..||.+-.....+..|++.|...
T Consensus       187 ---csleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  187 ---CSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             ---ccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence               6677776540000000000012358899999999999998999999988764

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.92  E-value=3.4e-10  Score=120.08  Aligned_cols=103  Identities=21%  Similarity=0.314  Sum_probs=80.6

Q ss_pred             Chhhhhh-c-CCCCccccCCCCCccCCchhhhhhccccCCccC-ccccccCCCCCCccCCCCCCCCcchhhhhccCcchh
Q 038961          271 DAEFYKD-S-QKRSKFECATCNKIFHSYQALGGHRASHKKIKG-CFATKIDSSENSIEAEHSPDPTADSKLIKSINNENS  347 (457)
Q Consensus       271 ~~~~~~~-h-~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~-~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L  347 (457)
                      +.+|++. | ..+..|.|..|..+|.++..|.+||.+|..-.. ....+=.-|-|.|+|..|+      |+|+..  .+|
T Consensus       226 lkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECg------KAFKfK--HHL  297 (1007)
T KOG3623|consen  226 LKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECG------KAFKFK--HHL  297 (1007)
T ss_pred             HHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccc------hhhhhH--HHH
Confidence            4466543 3 346679999999999999999999999975221 1122233346889999955      555555  999


Q ss_pred             hhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhh
Q 038961          348 ADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       348 ~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                      +.|+|+           |.|||||+|+.|+|+|.....+..||-.
T Consensus       298 KEHlRI-----------HSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  298 KEHLRI-----------HSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             Hhhhee-----------ecCCCCcCCcccccccccCCcccccccc
Confidence            999999           9999999999999999999999999744

>PHA02768 hypothetical protein; Provisional

Probab=98.64  E-value=1.1e-08  Score=75.78  Aligned_cols=25  Identities=24%  Similarity=0.484  Sum_probs=24.1

Q ss_pred             ccccCCCCcccCCCCchhhHhhhcc
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      .|.|.+|||+|....+|..|||+|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC
Confidence            4899999999999999999999999

>PHA00733 hypothetical protein

Probab=98.59  E-value=2.6e-08  Score=87.55  Aligned_cols=83  Identities=16%  Similarity=0.155  Sum_probs=67.9

Q ss_pred             CCCccccCCCCCccCCchhhhhh--ccc---cCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccc
Q 038961          280 KRSKFECATCNKIFHSYQALGGH--RAS---HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVA  354 (457)
Q Consensus       280 ~ekpy~C~~C~K~F~s~~~L~~H--~~~---H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~  354 (457)
                      ..+++.|.+|.+.|.....|..|  .+.   +.+            .+||.|+.|++.|...        ..|..|++. 
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~------------~kPy~C~~Cgk~Fss~--------s~L~~H~r~-   95 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA------------VSPYVCPLCLMPFSSS--------VSLKQHIRY-   95 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCC------------CCCccCCCCCCcCCCH--------HHHHHHHhc-
Confidence            46789999999999998888776  222   233            7899999988888755        889999987 


Q ss_pred             cCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          355 DCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       355 ~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                                |  +++|.|++|++.|.+...|..|++..++
T Consensus        96 ----------h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         96 ----------T--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ----------C--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence                      5  4579999999999999999999877554

>PHA02768 hypothetical protein; Provisional

Probab=98.22  E-value=4.1e-07  Score=67.38  Aligned_cols=44  Identities=7%  Similarity=-0.005  Sum_probs=37.2

Q ss_pred             CccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhh
Q 038961          323 SIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALG  387 (457)
Q Consensus       323 p~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~  387 (457)
                      .|+|+.|++.|+..        ++|..|+++           |+  +||+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~--------~~L~~H~r~-----------H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKR--------KSMITHLRK-----------HN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccH--------HHHHHHHHh-----------cC--CcccCCcccceecccceeE
Confidence            47888888777755        889999999           87  7999999999999888774

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.17  E-value=3.4e-07  Score=57.78  Aligned_cols=26  Identities=31%  Similarity=0.540  Sum_probs=23.8

Q ss_pred             hhhhhhccccCCCCccccccCCCccccCCCCCCCCCC
Q 038961          346 NSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPS  382 (457)
Q Consensus       346 ~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~  382 (457)
                      +|.+|+++           |+|+|||.|++|++.|.+
T Consensus         1 ~l~~H~~~-----------H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRT-----------HTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHH-----------HSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhh-----------cCCCCCCCCCCCcCeeCc
Confidence            47899999           999999999999999964

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.03  E-value=3.4e-06  Score=90.34  Aligned_cols=86  Identities=15%  Similarity=0.282  Sum_probs=42.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhh---hhccCcchhhhh
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKL---IKSINNENSADH  350 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~---f~~~~~~~L~~H  350 (457)
                      |+++++  +||.|. ||+.| .+..|..|+++|..            .+++.|.+|+..|..+..   +.. ....|..|
T Consensus       471 H~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp------------~Kpi~C~fC~~~v~~g~~~~d~~d-~~s~Lt~H  533 (567)
T PLN03086        471 HMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCP------------LRLITCRFCGDMVQAGGSAMDVRD-RLRGMSEH  533 (567)
T ss_pred             HHHhcC--CCccCC-CCCCc-chhHHHhhhhccCC------------CCceeCCCCCCccccCccccchhh-hhhhHHHH
Confidence            444432  455555 55433 33455555555555            566666666555431100   000 00345666


Q ss_pred             hccccCCCCccccccCCCccccCCCCCCCCCCchhhhhh
Q 038961          351 FFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGH  389 (457)
Q Consensus       351 ~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H  389 (457)
                      ..+           + |.+++.|..||+.|..+ .|..|
T Consensus       534 E~~-----------C-G~rt~~C~~Cgk~Vrlr-dm~~H  559 (567)
T PLN03086        534 ESI-----------C-GSRTAPCDSCGRSVMLK-EMDIH  559 (567)
T ss_pred             HHh-----------c-CCcceEccccCCeeeeh-hHHHH
Confidence            655           3 66666666666666554 34455

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.96  E-value=2.6e-06  Score=53.76  Aligned_cols=12  Identities=33%  Similarity=0.717  Sum_probs=10.5

Q ss_pred             cccccccCCccC
Q 038961           82 QQQQLCGKGFVS   93 (457)
Q Consensus        82 ~~C~~CgK~F~s   93 (457)
                      |.|++|+|.|.+
T Consensus        15 ~~C~~C~k~F~~   26 (26)
T PF13465_consen   15 YKCPYCGKSFSN   26 (26)
T ss_dssp             EEESSSSEEESS
T ss_pred             CCCCCCcCeeCc
Confidence            789999999974

...

>PHA00733 hypothetical protein

Probab=97.92  E-value=3.1e-06  Score=74.49  Aligned_cols=26  Identities=31%  Similarity=0.490  Sum_probs=15.7

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhc
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      +++|.|+.|++.|.+...|..|+++|
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~r~h   96 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHIRYT   96 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHHhcC
Confidence            45566666666666666666666654

>PHA00732 hypothetical protein

Probab=97.91  E-value=4.3e-06  Score=67.27  Aligned_cols=25  Identities=24%  Similarity=0.333  Sum_probs=23.0

Q ss_pred             ccccCCCCcccCCCCchhhHhhh-cc
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRS-HM   29 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~-H~   29 (457)
                      ||.|.+|++.|....+|..||+. |.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~   26 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT   26 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC
Confidence            68999999999999999999995 66

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.79  E-value=1.8e-05  Score=84.90  Aligned_cols=80  Identities=13%  Similarity=0.311  Sum_probs=63.4

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCD  357 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~  357 (457)
                      ..-++.+.|+.|++.|. ...|..|+.+|+.              ++.|. |++.+.         +..|..|+.+    
T Consensus       448 ~el~~H~~C~~Cgk~f~-~s~LekH~~~~Hk--------------pv~Cp-Cg~~~~---------R~~L~~H~~t----  498 (567)
T PLN03086        448 EEAKNHVHCEKCGQAFQ-QGEMEKHMKVFHE--------------PLQCP-CGVVLE---------KEQMVQHQAS----  498 (567)
T ss_pred             cccccCccCCCCCCccc-hHHHHHHHHhcCC--------------CccCC-CCCCcc---------hhHHHhhhhc----
Confidence            34456689999999996 6789999998754              67777 764331         2789999998    


Q ss_pred             CCccccccCCCccccCCCCCCCCCCc----------hhhhhhhhhc
Q 038961          358 DHRAETSCGAKKKHECPICLKVFPSG----------QALGGHKRSH  393 (457)
Q Consensus       358 ~~~~~~~H~geKp~~C~~Cgk~F~~~----------~~L~~H~r~H  393 (457)
                             |..+||+.|+.|++.|..+          ..|..|..++
T Consensus       499 -------hCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C  537 (567)
T PLN03086        499 -------TCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC  537 (567)
T ss_pred             -------cCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc
Confidence                   9999999999999999633          4788998875

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.70  E-value=6.4e-06  Score=83.61  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=25.6

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      --|.|.+|+|.|.+...|+.|+-+|....
T Consensus       355 gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  355 GIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             ceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence            36999999999999999999998887543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.67  E-value=8.1e-06  Score=49.64  Aligned_cols=23  Identities=43%  Similarity=0.798  Sum_probs=22.1

Q ss_pred             cccCCCCcccCCCCchhhHhhhc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      |+|.+|+++|.....|..||+.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999987

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=97.64  E-value=1.1e-05  Score=57.08  Aligned_cols=34  Identities=26%  Similarity=0.481  Sum_probs=32.0

Q ss_pred             ccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          283 KFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      ||+|..||+.|...+.|..|++.|++            ++++.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg------------~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK------------QNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC------------CCccceeE
Confidence            69999999999999999999999999            88888875

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.39  E-value=4e-05  Score=46.52  Aligned_cols=23  Identities=48%  Similarity=0.823  Sum_probs=21.8

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhc
Q 038961          371 HECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999886

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=97.35  E-value=5.6e-05  Score=53.48  Aligned_cols=28  Identities=18%  Similarity=0.173  Sum_probs=26.3

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      ||+|+.||+.|...+.|..|++.|++..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~   28 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQN   28 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999863

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.24  E-value=6.5e-05  Score=47.48  Aligned_cols=25  Identities=36%  Similarity=0.599  Sum_probs=23.9

Q ss_pred             ccccCCCCcccCCCCchhhHhhhcc
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      +|.|++|++.|.+..+|..|||.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999999996

>PHA00732 hypothetical protein

Probab=97.24  E-value=0.00018  Score=57.82  Aligned_cols=37  Identities=19%  Similarity=0.270  Sum_probs=31.3

Q ss_pred             ccccCCCCCccCCchhhhhhccc-cCCccCccccccCCCCCCccCCCCCCCCc
Q 038961          283 KFECATCNKIFHSYQALGGHRAS-HKKIKGCFATKIDSSENSIEAEHSPDPTA  334 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~-H~~~k~~~~~~c~~cekp~~C~~C~k~f~  334 (457)
                      ||.|..|++.|.+...|..|++. |.+               +.|+.|++.|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---------------~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---------------TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---------------CccCCCCCEeC
Confidence            68999999999999999999985 654               36888887774

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.12  E-value=0.00013  Score=74.29  Aligned_cols=80  Identities=23%  Similarity=0.358  Sum_probs=47.9

Q ss_pred             cccCCCCcccCCCCchhhHhhhccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCc-cccccc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENN-SSQQQQ   84 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~-~~~~~C   84 (457)
                      |+|..|+|.|.|.-+|-.|.|+|--..-......++...     ++++    .-..+|+++       ++.+. +.-|.|
T Consensus       296 YrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~-----~~~~----rae~~ea~r-------sg~dss~gi~~C  359 (500)
T KOG3993|consen  296 YRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQ-----AVET----RAEVQEAER-------SGDDSSSGIFSC  359 (500)
T ss_pred             ecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhh-----hhhh----hhhhhhccc-------cCCcccCceeec
Confidence            899999999999999999999998443221111110000     0000    001123321       11111 225899


Q ss_pred             ccccCCccCCccccccc
Q 038961           85 QLCGKGFVSWKPMKCNS  101 (457)
Q Consensus        85 ~~CgK~F~s~~~mr~Hs  101 (457)
                      .+|||.|.+..-||-|.
T Consensus       360 ~~C~KkFrRqAYLrKHq  376 (500)
T KOG3993|consen  360 HTCGKKFRRQAYLRKHQ  376 (500)
T ss_pred             HHhhhhhHHHHHHHHhH
Confidence            99999999887788884

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.11  E-value=0.00014  Score=45.85  Aligned_cols=26  Identities=50%  Similarity=0.639  Sum_probs=24.4

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ||+|.+|++.|.+..+|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999999875

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.08  E-value=0.00013  Score=44.23  Aligned_cols=23  Identities=43%  Similarity=0.829  Sum_probs=19.9

Q ss_pred             cccCCCCcccCCCCchhhHhhhc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      |.|.+|++.|.+...|..||++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999976

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.98  E-value=0.0003  Score=69.32  Aligned_cols=71  Identities=20%  Similarity=0.394  Sum_probs=47.4

Q ss_pred             CCCCccccCC--CCCccCCchhhhhhccc-cCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcccc
Q 038961          279 QKRSKFECAT--CNKIFHSYQALGGHRAS-HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVAD  355 (457)
Q Consensus       279 ~~ekpy~C~~--C~K~F~s~~~L~~H~~~-H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~  355 (457)
                      .++|||+|++  |.|++....-|+.|+.- |..            .+...-+-                  -..|.-.  
T Consensus       345 ~d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~------------~~~~~~p~------------------p~~~~~F--  392 (423)
T COG5189         345 KDGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQN------------QKLHENPS------------------PEKMNIF--  392 (423)
T ss_pred             ecCceecCCCCCchhhhccccchhhhhhccccC------------cccCCCCC------------------ccccccc--
Confidence            3469999987  99999999999998763 322            11111100                  0011111  


Q ss_pred             CCCCccccccCCCccccCCCCCCCCCCchhhhhhh
Q 038961          356 CDDHRAETSCGAKKKHECPICLKVFPSGQALGGHK  390 (457)
Q Consensus       356 ~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~  390 (457)
                               -...|||+|++|+|.+.....|+.|+
T Consensus       393 ---------~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         393 ---------SAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ---------cccCCceeccccchhhccCccceecc
Confidence                     23469999999999999999999885

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.83  E-value=0.00042  Score=41.84  Aligned_cols=24  Identities=46%  Similarity=0.809  Sum_probs=20.2

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhcc
Q 038961          371 HECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |.|++|++.|.+...|..|+++|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998873

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.71  E-value=0.00051  Score=42.03  Aligned_cols=24  Identities=38%  Similarity=0.632  Sum_probs=22.8

Q ss_pred             cccCCCCcccCCCCchhhHhhhcc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |.|..|++.|.....|..||++|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999987

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.68  E-value=0.00064  Score=55.97  Aligned_cols=73  Identities=25%  Similarity=0.404  Sum_probs=22.0

Q ss_pred             ccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccc
Q 038961          285 ECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETS  364 (457)
Q Consensus       285 ~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~  364 (457)
                      +|..|+..|.+...|..|+....+..           -+ ....          +...  ..+..+.+.           
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~-----------~~-~~~~----------l~~~--~~~~~~~~~-----------   45 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD-----------IP-DQKY----------LVDP--NRLLNYLRK-----------   45 (100)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             Cccccccccccccccccccccccccc-----------cc-cccc----------cccc--ccccccccc-----------
Confidence            59999999999999999997655411           11 0000          0000  222222221           


Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhc
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                       .-...+.|.+|++.|.+..+|..||+.+
T Consensus        46 -~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   46 -KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ----SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             -ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence             1123699999999999999999999975

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.55  E-value=0.0005  Score=42.50  Aligned_cols=24  Identities=42%  Similarity=0.773  Sum_probs=22.2

Q ss_pred             cccCCCCcccCCCCchhhHhhhcc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |.|++|++.|.+...|..||++|.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~~   24 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSKK   24 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTHH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcCC
Confidence            689999999999999999999863

>smart00355 ZnF_C2H2 zinc finger

Probab=96.24  E-value=0.0025  Score=38.86  Aligned_cols=25  Identities=48%  Similarity=0.753  Sum_probs=22.9

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhccC
Q 038961          371 HECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |.|+.|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999998864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.21  E-value=0.0034  Score=46.63  Aligned_cols=51  Identities=20%  Similarity=0.219  Sum_probs=37.3

Q ss_pred             CccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCC-ccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          323 SIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAK-KKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       323 p~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~ge-Kp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      .|.|++|++.|. .        ..|..|....          |..+ +.+.||+|...+.  .+|..|++.+.
T Consensus         2 ~f~CP~C~~~~~-~--------~~L~~H~~~~----------H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKGFS-E--------SSLVEHCEDE----------HRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCccC-H--------HHHHHHHHhH----------CcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            477888776433 1        6788887761          6665 6799999998755  48999988764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.17  E-value=0.001  Score=42.07  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=21.7

Q ss_pred             ccccCCCCcccCCCCchhhHhhhc
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      .|.|.+|+|.|.+..+|..||+++
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccC
Confidence            478999999999999999999874

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.08  E-value=0.005  Score=60.94  Aligned_cols=24  Identities=25%  Similarity=0.383  Sum_probs=22.5

Q ss_pred             CcccccCC--CCcccCCCCchhhHhh
Q 038961            3 EFKHVCKF--CSKSFPCGRSLGGHMR   26 (457)
Q Consensus         3 ek~~~Ck~--C~K~F~~~~~L~~HmR   26 (457)
                      +|||+|.+  |+|.+.++.-|+-||.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhh
Confidence            59999987  9999999999999996

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.33  E-value=0.011  Score=43.89  Aligned_cols=49  Identities=20%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             ccccCCCCCccCCchhhhhhcc-ccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          283 KFECATCNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      .|.|++|++ ..+...|..|.. .|...           .+.+.|++|...+.          .+|..|+..
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~-----------~~~v~CPiC~~~~~----------~~l~~Hl~~   51 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE-----------SKNVVCPICSSRVT----------DNLIRHLNS   51 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC-----------CCCccCCCchhhhh----------hHHHHHHHH
Confidence            389999999 556788999965 46652           35788999864332          578888875

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.17  E-value=0.011  Score=43.10  Aligned_cols=31  Identities=23%  Similarity=0.449  Sum_probs=22.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      +..+.|..|++|+..+.+..+|++|+..+++
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            4457899999999999999999999977665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.78  E-value=0.0086  Score=36.85  Aligned_cols=23  Identities=43%  Similarity=0.677  Sum_probs=21.2

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhc
Q 038961          371 HECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999875

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.18  E-value=0.0092  Score=48.95  Aligned_cols=71  Identities=23%  Similarity=0.348  Sum_probs=18.0

Q ss_pred             ccCCCCcccCCCCchhhHhh-hccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCcccccccc
Q 038961            7 VCKFCSKSFPCGRSLGGHMR-SHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSSQQQQQ   85 (457)
Q Consensus         7 ~Ck~C~K~F~~~~~L~~HmR-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~~~~~~C~   85 (457)
                      .|.+|+..|.....|..||+ .|....+....          +.   .......-++..-             ...+.|.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~----------l~---~~~~~~~~~~~~~-------------~~~~~C~   54 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKY----------LV---DPNRLLNYLRKKV-------------KESFRCP   54 (100)
T ss_dssp             --------------------------------------------------------------------------SSEEBS
T ss_pred             Cccccccccccccccccccccccccccccccc----------cc---ccccccccccccc-------------CCCCCCC
Confidence            49999999999999999996 66532221000          00   0000000011110             0127899


Q ss_pred             cccCCccCCccccccccc
Q 038961           86 LCGKGFVSWKPMKCNSEK  103 (457)
Q Consensus        86 ~CgK~F~s~~~mr~Hs~~  103 (457)
                      +|++.|.+..+++.|...
T Consensus        55 ~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   55 YCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SSS-EESSHHHHHHHHHH
T ss_pred             ccCCCCcCHHHHHHHHcC
Confidence            999999999987777643

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.82  E-value=0.027  Score=35.52  Aligned_cols=23  Identities=35%  Similarity=0.553  Sum_probs=21.1

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhc
Q 038961          371 HECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      |-|.+|++.|.+..+|..|++++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998763

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=92.64  E-value=0.053  Score=49.55  Aligned_cols=37  Identities=11%  Similarity=0.284  Sum_probs=31.8

Q ss_pred             CccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCc
Q 038961          282 SKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTA  334 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~  334 (457)
                      -+|.|. |++   ....+.+|.++|++            +++|.|..|+..|.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g------------~~~YrC~~C~~~l~  154 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRG------------EAVYRCRRCGETLV  154 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcC------------CccEECCCCCceeE
Confidence            379998 998   67788999999999            99999999876554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.57  E-value=0.057  Score=39.39  Aligned_cols=31  Identities=19%  Similarity=0.339  Sum_probs=23.0

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +..+.|..|++|+..+.+..+|.+|+.++.+
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            4467899999999999999999999988777

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=92.25  E-value=0.055  Score=49.43  Aligned_cols=40  Identities=10%  Similarity=0.081  Sum_probs=32.0

Q ss_pred             CCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCch
Q 038961          322 NSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQ  384 (457)
Q Consensus       322 kp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~  384 (457)
                      -+|.|. |++   +.        ..+.+|.++           |+|+++|.|..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~--------~~~rrH~ri-----------~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQ--------LTVRRHNRV-----------VRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---ee--------CHHHHHHHH-----------hcCCccEECCCCCceeEEec
Confidence            367787 764   11        678999999           99999999999999987543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.80  E-value=0.057  Score=35.85  Aligned_cols=23  Identities=26%  Similarity=0.622  Sum_probs=21.0

Q ss_pred             ccccCCCCcccCCCCchhhHhhh
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      +|.|++|++.|....+|..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999974

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=91.61  E-value=0.066  Score=32.60  Aligned_cols=23  Identities=26%  Similarity=0.459  Sum_probs=18.5

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhcc
Q 038961          371 HECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |+|+.|+.... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998888 889999998865

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.41  E-value=0.076  Score=33.05  Aligned_cols=21  Identities=24%  Similarity=0.523  Sum_probs=18.3

Q ss_pred             cccCCCCcccCCCCchhhHhhh
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      ..|.+||+.| ...+|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 78889999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.56  E-value=0.14  Score=31.84  Aligned_cols=21  Identities=33%  Similarity=0.722  Sum_probs=17.7

Q ss_pred             ccCCCCCCCCCCchhhhhhhhh
Q 038961          371 HECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                      ..|++||+.| ....|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67789999764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=89.94  E-value=0.085  Score=32.10  Aligned_cols=22  Identities=32%  Similarity=0.572  Sum_probs=18.0

Q ss_pred             cccCCCCcccCCCCchhhHhhhc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      |.|.+|.-... ...|..||+.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            78999999998 88999999975

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=89.78  E-value=0.34  Score=53.34  Aligned_cols=24  Identities=38%  Similarity=0.832  Sum_probs=18.5

Q ss_pred             cccCCCCcccC---------------CCCchhhHhh-hcc
Q 038961            6 HVCKFCSKSFP---------------CGRSLGGHMR-SHM   29 (457)
Q Consensus         6 ~~Ck~C~K~F~---------------~~~~L~~HmR-~H~   29 (457)
                      |.|.+|+++|.               .-..|++||+ .|.
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~  139 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK  139 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh
Confidence            67888888883               5667888884 776

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.16  E-value=0.31  Score=41.56  Aligned_cols=13  Identities=23%  Similarity=0.274  Sum_probs=10.2

Q ss_pred             cccccccCCccCC
Q 038961           82 QQQQLCGKGFVSW   94 (457)
Q Consensus        82 ~~C~~CgK~F~s~   94 (457)
                      .+|+.||..|.-.
T Consensus        27 ivCP~CG~~~~~~   39 (108)
T PF09538_consen   27 IVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCCCccCcc
Confidence            5799999988844

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=87.66  E-value=0.33  Score=49.60  Aligned_cols=57  Identities=23%  Similarity=0.301  Sum_probs=48.9

Q ss_pred             CCccCCCCCCCCcchhhhhccCcchhhhhhc--cccCCCCccccccCCC--ccccCC--CCCCCCCCchhhhhhhhhccC
Q 038961          322 NSIEAEHSPDPTADSKLIKSINNENSADHFF--VADCDDHRAETSCGAK--KKHECP--ICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       322 kp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~--~~~~~~~~~~~~H~ge--Kp~~C~--~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      .++.|..|...|...        ..|..|.+  .           |+++  +||.|+  .|++.|.+...|..|...|++
T Consensus       288 ~~~~~~~~~~~~s~~--------~~l~~~~~~~~-----------h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  348 (467)
T COG5048         288 LPIKSKQCNISFSRS--------SPLTRHLRSVN-----------HSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS  348 (467)
T ss_pred             cCCCCccccCCcccc--------ccccccccccc-----------cccccCCceeeeccCCCccccccccccCCcccccC
Confidence            467888877666644        78888888  7           9999  999999  799999999999999999997


Q ss_pred             CC
Q 038961          396 GG  397 (457)
Q Consensus       396 ~~  397 (457)
                      -.
T Consensus       349 ~~  350 (467)
T COG5048         349 IS  350 (467)
T ss_pred             CC
Confidence            54

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=87.08  E-value=0.2  Score=48.04  Aligned_cols=51  Identities=24%  Similarity=0.242  Sum_probs=38.6

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhh-hhhccC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGH-KRSHLL  395 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H-~r~H~~  395 (457)
                      .||| |-+|++.|-..        .-|..|++               .|-|+|.||.|...++-.|..| |.+|..
T Consensus         9 ~kpw-cwycnrefdde--------kiliqhqk---------------akhfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDE--------KILIQHQK---------------AKHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             CCce-eeecccccchh--------hhhhhhhh---------------hccceeeeehhhhccCCCceeehhhhhhh
Confidence            3454 88888777655        44666555               4679999999988899999999 888863

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.00  E-value=0.36  Score=31.91  Aligned_cols=23  Identities=17%  Similarity=0.452  Sum_probs=20.3

Q ss_pred             cccCCCCCCCCCCchhhhhhhhh
Q 038961          370 KHECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                      +|.|.+|++.|....++..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=86.77  E-value=0.24  Score=50.60  Aligned_cols=76  Identities=16%  Similarity=0.158  Sum_probs=49.8

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCc
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHR  360 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~  360 (457)
                      ..|-.|-.|++.|.+--.-..||..|+|..=        .++.|--+.                ..|..-+..       
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffI--------PdreYL~D~----------------~GLl~YLge-------  212 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHGFFI--------PDREYLTDE----------------KGLLKYLGE-------  212 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccCCcC--------CchHhhhch----------------hHHHHHHHH-------
Confidence            3457899999999999888899998888210        034443332                111111110       


Q ss_pred             cccccCCCccccCCCCC---CCCCCchhhhhhhhh
Q 038961          361 AETSCGAKKKHECPICL---KVFPSGQALGGHKRS  392 (457)
Q Consensus       361 ~~~~H~geKp~~C~~Cg---k~F~~~~~L~~H~r~  392 (457)
                        +   -..-|.|-.|+   +.|.+-.+.+.||+.
T Consensus       213 --K---V~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  213 --K---VGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             --H---hccCceEEEeccccCcccccHHHHHHHhh
Confidence              0   02458888898   999999999999853

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=84.79  E-value=0.52  Score=55.09  Aligned_cols=80  Identities=24%  Similarity=0.294  Sum_probs=53.4

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccc-cCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRAS-HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADC  356 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~-H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~  356 (457)
                      |+-.+.|.|..|+-.|.....|..|||+ |..            ...   .+|               .....|.+.   
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~------------~~~---~~c---------------~~gq~~~~~---  506 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPE------------SQS---AYC---------------KAGQNHPRL---  506 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccc------------cch---hHh---------------Hhccccccc---
Confidence            4455889999999999999999999987 443            111   111               111222222   


Q ss_pred             CCCccccccCCCccccCCCCCCCCCCchhhhhhhhh
Q 038961          357 DDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       357 ~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                        ++....-.+-+||.|..|...|....+|..|+..
T Consensus       507 --arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  507 --ARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             --cccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence              1111112345899999999999999999999765

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.61  E-value=0.48  Score=45.37  Aligned_cols=25  Identities=28%  Similarity=0.598  Sum_probs=21.9

Q ss_pred             CcccccCCCCcccCCCCchhhHhhh
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      +|..+|.+|++.|....-+.+..|.
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~   27 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRV   27 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceE
Confidence            4778999999999999988888874

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.34  E-value=0.51  Score=33.20  Aligned_cols=24  Identities=29%  Similarity=0.610  Sum_probs=14.9

Q ss_pred             CCcccccCCCCcccCCC----CchhhHh
Q 038961            2 REFKHVCKFCSKSFPCG----RSLGGHM   25 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~----~~L~~Hm   25 (457)
                      +...-+|++|++.|..+    ..|..|+
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL   40 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHL   40 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhh
Confidence            34567899999999987    5677777

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=81.05  E-value=1.3  Score=45.16  Aligned_cols=63  Identities=13%  Similarity=0.178  Sum_probs=45.8

Q ss_pred             CccccCCCCCccCCchhhhhhcc--ccCCccCccccccCCCC--CCccCC--CCCCCCcchhhhhccCcchhhhhhcccc
Q 038961          282 SKFECATCNKIFHSYQALGGHRA--SHKKIKGCFATKIDSSE--NSIEAE--HSPDPTADSKLIKSINNENSADHFFVAD  355 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~--~H~~~k~~~~~~c~~ce--kp~~C~--~C~k~f~~~k~f~~~~~~~L~~H~~~~~  355 (457)
                      .++.|..|...|.....|..|.+  .|.+            +  +++.|.  .|++.|...        ..+..|..+  
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~------------~~~~~~~~p~~~~~~~~~~~--------~~~~~~~~~--  345 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSG------------ESLKPFSCPYSLCGKLFSRN--------DALKRHILL--  345 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccc------------ccCCceeeeccCCCcccccc--------ccccCCccc--
Confidence            46788888888888888888888  7887            6  777777  566555433        667777777  


Q ss_pred             CCCCccccccCCCccccCCC
Q 038961          356 CDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       356 ~~~~~~~~~H~geKp~~C~~  375 (457)
                               |++.+++.|..
T Consensus       346 ---------~~~~~~~~~~~  356 (467)
T COG5048         346 ---------HTSISPAKEKL  356 (467)
T ss_pred             ---------ccCCCcccccc
Confidence                     77777777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	457
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-06
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-06
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	4e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	2e-05

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 283 KFECATCNKIFHSYQALGGHRASHKK 308
            + C+ C + F S QALGGH   H++
Sbjct: 6   SYTCSFCKREFRSAQALGGHMNVHRR 31

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 42.4 bits (100), Expect = 5e-06
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 369 KKHECPICLKVFPSGQALGGHKRSH 393
           + + C  C + F S QALGGH   H
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVH 29

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 39.7 bits (93), Expect = 4e-05
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 5  KHVCKFCSKSFPCGRSLGGHMRSH 28
           + C FC + F   ++LGGHM  H
Sbjct: 6  SYTCSFCKREFRSAQALGGHMNVH 29

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 30/203 (14%), Positives = 56/203 (27%), Gaps = 10/203 (4%)

Query: 207 ESSDNNSLDSEKAKVIKNLKKDTELDQAELGSSKQ--NSTSKKNVCNSFDPELRSDSLKR 264
           E SD+ S      +  K     TE   +     +      S +    S +  ++++    
Sbjct: 21  ERSDDGSSQLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQRATESAELPMKNNDEGT 80

Query: 265 STTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSI 324
                +      +    +K E     +                K +  ++    ++ N +
Sbjct: 81  PDKKGNTRGDLVNEHSEAKDEADEATQKQAK-------DTDKSKAQVTYSDTGINNANEL 133

Query: 325 EAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAK-KKHECPICLKVFPSG 383
               + D    S           A    V+            +    ++C +C  V  S 
Sbjct: 134 SRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSP 193

Query: 384 QALGGHKRSHLLGGNEARNSPAI 406
             L  H  SH L GN    S  I
Sbjct: 194 LDLDAHVASHGLHGNMTLTSSEI 216

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	457
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.87
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.75
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.74
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.7
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.68
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.67
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.67
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.63
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.59
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.53
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.52
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.48
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.46
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.46
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.46
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.46
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.45
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.43
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.42
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.42
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.41
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.36
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.33
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.32
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.3
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.29
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.28
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.27
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.26
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.24
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.22
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.22
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.2
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.18
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.16
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.15
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.13
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.13
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.12
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.1
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.03
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.0
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.0
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.99
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.97
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.96
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.95
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.93
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.89
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.87
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.87
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.86
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.86
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.85
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.83
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.83
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.82
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.82
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.81
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.8
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.8
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.8
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.79
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.78
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.78
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.78
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.77
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.77
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.77
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.76
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.73
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.72
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.71
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.7
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.7
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.7
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.69
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.69
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.66
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.66
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.65
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.64
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.64
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.64
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.61
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.61
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.6
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.59
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.58
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.57
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.57
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.57
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.56
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.56
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.56
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.55
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.53
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.53
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.53
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.52
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.52
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.51
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.51
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.5
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.5
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.49
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.48
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.47
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.47
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.45
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.45
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.45
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.44
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.42
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.41
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.38
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.36
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.35
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.35
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.32
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.31
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.31
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.3
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.29
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.27
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.27
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.23
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.21
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.21
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.2
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.19
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.48
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.15
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.12
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.11
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.1
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.1
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.1
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.09
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.37
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.09
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.08
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.08
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.07
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.06
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.06
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.05
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.05
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.04
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.3
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.03
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.03
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.02
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.24
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.24
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.98
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.23
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.96
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.96
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.95
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.92
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.91
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.91
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.84
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.78
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.71
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.69
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.18
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.61
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.66
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.14
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	93.2
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.12
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	92.68
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	89.55

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=6.8e-29  Score=229.02  Aligned_cols=93  Identities=23%  Similarity=0.397  Sum_probs=84.7

Q ss_pred             hhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhc
Q 038961          273 EFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFF  352 (457)
Q Consensus       273 ~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~  352 (457)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|++
T Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~L~~H~~  154 (190)
T 2i13_A           95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG------------EKPYKCPECGKSFSRE--------DNLHTHQR  154 (190)
T ss_dssp             HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC------------CCCEECTTTCCEESCH--------HHHHHHHH
T ss_pred             HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC------------CCCeECCCCCcccCCH--------HHHHHHHH
Confidence            367889999999999999999999999999999999            9999999988877744        88999999


Q ss_pred             cccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          353 VADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       353 ~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +           |++++||.|++|++.|.+...|..|+++|+++
T Consensus       155 ~-----------H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          155 T-----------HTGEKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             H-----------HHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             h-----------cCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            9           99999999999999999999999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=3.2e-24  Score=197.66  Aligned_cols=89  Identities=19%  Similarity=0.197  Sum_probs=79.5

Q ss_pred             hh-hhc-CCCCcccc--CCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCCCcchhhhhccCcchh
Q 038961          274 FY-KDS-QKRSKFEC--ATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLIKSINNENS  347 (457)
Q Consensus       274 ~~-~~h-~~ekpy~C--~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f~~~~~~~L  347 (457)
                      |+ +.| .++++|.|  .+|++.|.+...|..|+++|++            ++||.|.+  |++.|...        ..|
T Consensus        93 H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~~~C~k~F~~~--------~~L  152 (190)
T 1tf6_A           93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ------------QLPYECPHEGCDKRFSLP--------SRL  152 (190)
T ss_dssp             HHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS------------SCSSBCCSSSCCCBCSSH--------HHH
T ss_pred             HHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC------------CCCccCCCCCCCchhcCH--------HHH
Confidence            54 456 47889999  8999999999999999999999            99999988  99888755        889


Q ss_pred             hhhhccccCCCCccccccCCCccccCCC---CCCCCCCchhhhhhhhhccCC
Q 038961          348 ADHFFVADCDDHRAETSCGAKKKHECPI---CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       348 ~~H~~~~~~~~~~~~~~H~geKp~~C~~---Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ..|+++           |+|   |.|++   |++.|.+...|..|+++|+++
T Consensus       153 ~~H~~~-----------H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          153 KRHEKV-----------HAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHTS-----------SCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHH-----------hCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            999999           988   99999   999999999999999999863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=6.2e-23  Score=182.23  Aligned_cols=91  Identities=20%  Similarity=0.350  Sum_probs=83.2

Q ss_pred             hhhhcCCCCccccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCCCcchhhhhccCcchhhh
Q 038961          274 FYKDSQKRSKFECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLIKSINNENSAD  349 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f~~~~~~~L~~  349 (457)
                      |+++|.+++||.|.+  |++.|.+...|..|+++|.+            +++|.|.+  |++.|...        ..|..
T Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~--------~~L~~  117 (155)
T 2gli_A           58 HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG------------EKPYMCEHEGCSKAFSNA--------SDRAK  117 (155)
T ss_dssp             HTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT------------CCCEECCSTTCCCEESSS--------STTHH
T ss_pred             HHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC------------CCCeeCCCCCCCCccCCH--------HHHHH
Confidence            556688899999986  99999999999999999999            89999998  88777644        89999


Q ss_pred             hh-ccccCCCCccccccCCCccccCCC--CCCCCCCchhhhhhhhhccC
Q 038961          350 HF-FVADCDDHRAETSCGAKKKHECPI--CLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       350 H~-~~~~~~~~~~~~~H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |+ ++           |++++||.|++  |++.|.+...|..|+++|+|
T Consensus       118 H~~~~-----------H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          118 HQNRT-----------HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHT-----------TCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHh-----------cCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            98 78           99999999999  99999999999999999975

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.84  E-value=2.1e-22  Score=185.41  Aligned_cols=95  Identities=20%  Similarity=0.349  Sum_probs=87.7

Q ss_pred             hhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhc
Q 038961          273 EFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFF  352 (457)
Q Consensus       273 ~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~  352 (457)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|++
T Consensus        67 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~  126 (190)
T 2i13_A           67 RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG------------EKPYACPECGKSFSQL--------AHLRAHQR  126 (190)
T ss_dssp             HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT------------CCCEECTTTCCEESSH--------HHHHHHHH
T ss_pred             HHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCC------------CCCCcCCCCCCccCCH--------HHHHHHHH
Confidence            377889999999999999999999999999999999            8999999988877644        88999999


Q ss_pred             cccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          353 VADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       353 ~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      +           |++++||.|++|++.|.+...|..|+++|+++..
T Consensus       127 ~-----------h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  161 (190)
T 2i13_A          127 T-----------HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP  161 (190)
T ss_dssp             H-----------HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC
T ss_pred             H-----------hCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            9           9999999999999999999999999999998543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=4.3e-20  Score=162.17  Aligned_cols=35  Identities=23%  Similarity=0.474  Sum_probs=23.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|++++||.|.+|+++|.+...|..|+++|.+
T Consensus        69 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           69 HEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             HHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred             hccccCCCccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence            34556666777777777777777777777766666

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=3e-20  Score=163.13  Aligned_cols=93  Identities=17%  Similarity=0.223  Sum_probs=86.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      +.++|.|+++|.|.+|+++|.+...|..|+++|++            ++||.|++|++.|...        ..|..|+++
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~   72 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW------------EKKYPCRYCEKVFPLA--------EYRTKHEIH   72 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC------------CSCEECSSSSCEESSH--------HHHHHHHHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC------------CCCeeCCccCeecccc--------cchhhhccc
Confidence            45789999999999999999999999999999999            9999999988887754        889999999


Q ss_pred             ccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          354 ADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       354 ~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                                 |+|++||.|++|++.|.+...|..|+++|+++.
T Consensus        73 -----------H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           73 -----------HTGERRYQCLACGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             -----------HHTCCCEEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             -----------cCCCccccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence                       999999999999999999999999999998753

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.75  E-value=8.3e-19  Score=155.85  Aligned_cols=70  Identities=23%  Similarity=0.379  Sum_probs=63.9

Q ss_pred             hhhhcCCCCccccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCCCcchhhhhccCcchhhh
Q 038961          274 FYKDSQKRSKFECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLIKSINNENSAD  349 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f~~~~~~~L~~  349 (457)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|++            +++|.|.+  |++.|...        ..|..
T Consensus        81 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~------------~~~~~C~~~~C~k~f~~~--------~~L~~  140 (155)
T 2rpc_A           81 HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG------------EKPFKCEFEGCDRRFANS--------SDRKK  140 (155)
T ss_dssp             HTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCS------------SCSBCCSSTTCCCCBSSH--------HHHHH
T ss_pred             HHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCC------------CCCccCCCCCCCCccCCH--------HHHHH
Confidence            456688899999998  99999999999999999999            99999997  99888754        88999


Q ss_pred             hhccccCCCCccccccCCCccccCC
Q 038961          350 HFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       350 H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      |+++           |++++||.|.
T Consensus       141 H~~~-----------H~~~k~~~c~  154 (155)
T 2rpc_A          141 HMHV-----------HTSDKSGPSS  154 (155)
T ss_dssp             SSTT-----------TTSCCCSCSC
T ss_pred             HHHH-----------hcCCCCCCCC
Confidence            9999           9999999996

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.74  E-value=7.9e-19  Score=161.40  Aligned_cols=92  Identities=21%  Similarity=0.265  Sum_probs=83.7

Q ss_pred             hhhhhcCCCCccccC--CCCCccCCchhhhhhc-ccc-CCccCccccccCCCCCCccC--CCCCCCCcchhhhhccCcch
Q 038961          273 EFYKDSQKRSKFECA--TCNKIFHSYQALGGHR-ASH-KKIKGCFATKIDSSENSIEA--EHSPDPTADSKLIKSINNEN  346 (457)
Q Consensus       273 ~~~~~h~~ekpy~C~--~C~K~F~s~~~L~~H~-~~H-~~~k~~~~~~c~~cekp~~C--~~C~k~f~~~k~f~~~~~~~  346 (457)
                      .|+++|.++++|.|.  .|++.|.+...|..|+ +.| .+            +++|.|  ..|++.|...        ..
T Consensus        62 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~------------~~~~~C~~~~C~k~f~~~--------~~  121 (190)
T 1tf6_A           62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK------------ICVYVCHFENCGKAFKKH--------NQ  121 (190)
T ss_dssp             HHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT------------TSCCEECSSSSCEECSSH--------HH
T ss_pred             HHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC------------cceeeCCCCCCccccCCH--------HH
Confidence            377889999999999  8999999999999999 778 45            789999  8888777644        88


Q ss_pred             hhhhhccccCCCCccccccCCCccccCCC--CCCCCCCchhhhhhhhhccC
Q 038961          347 SADHFFVADCDDHRAETSCGAKKKHECPI--CLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       347 L~~H~~~~~~~~~~~~~~H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |..|+++           |++++||.|++  |++.|.+...|..|+++|++
T Consensus       122 L~~H~~~-----------H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          122 LKVHQFS-----------HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHGG-----------GSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHH-----------hCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            9999999           99999999988  99999999999999999997

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=6.7e-18  Score=142.58  Aligned_cols=98  Identities=19%  Similarity=0.203  Sum_probs=84.9

Q ss_pred             CChhhhhhcCCCCccccCCCCCccCCchhhhhhccc--cCCccCccccccCCCCCCc-cCCCCCCCCcchhhhhccCcch
Q 038961          270 SDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRAS--HKKIKGCFATKIDSSENSI-EAEHSPDPTADSKLIKSINNEN  346 (457)
Q Consensus       270 ~~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~--H~~~k~~~~~~c~~cekp~-~C~~C~k~f~~~k~f~~~~~~~  346 (457)
                      .+..|+++|++++||.|.+|++.|.+...|..|+++  |.+            ++++ .|.+|++.|.    |..  ...
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~------------~~~~~~C~~C~~~f~----f~~--~~~   67 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR------------DDNHETDNNNPKRWS----KPR--KRS   67 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB------------CSCCCCCCCCCSCCS----SCC--CCC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccc------------cCCCccCCCCCcccc----ccc--HHH
Confidence            345688999999999999999999999999999998  776            5555 4999887772    122  288


Q ss_pred             hhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          347 SADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       347 L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |..|+++           |++++||.|++|++.|.+...|..|+++|...
T Consensus        68 l~~H~~~-----------H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           68 LLEMEGK-----------EDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CCCCCCS-----------CCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             HHHHhhc-----------cCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            9999999           99999999999999999999999999998764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=2e-18  Score=146.89  Aligned_cols=56  Identities=18%  Similarity=0.353  Sum_probs=49.6

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      +.++++|.|.+|++.|.+...|..|+++|.+            ++||.|.+|++.|...        ..|..|++.
T Consensus        61 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~  116 (124)
T 2dlq_A           61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTG------------EMPYKCSSCSQQFMQK--------KDLQSHMIK  116 (124)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHSS------------SCSEECSSSCCEESSH--------HHHHHHHHH
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCC------------CCCccCCCccchhCCH--------HHHHHHHHH
Confidence            4567889999999999999999999999999            9999999988877744        889999873

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.1e-18  Score=138.94  Aligned_cols=90  Identities=22%  Similarity=0.346  Sum_probs=83.5

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCD  357 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~  357 (457)
                      +.+++||.|.+|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|+++    
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~----   58 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG------------VKPYKCKTCDYAAADS--------SSLNKHLRI----   58 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC------------CCSEECSSSCCEESSH--------HHHHHHHHH----
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCC------------CCCEeCCCCCCccCCH--------HHHHHHHHH----
Confidence            5678999999999999999999999999999            8999999988777644        889999999    


Q ss_pred             CCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          358 DHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       358 ~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                             |+++++|.|++|++.|.+...|..|+++|+++..
T Consensus        59 -------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           59 -------HSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             -------SCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             -------hCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence                   9999999999999999999999999999998644

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.70  E-value=2.2e-17  Score=137.25  Aligned_cols=90  Identities=22%  Similarity=0.390  Sum_probs=83.3

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCD  357 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~  357 (457)
                      ...+++|.|.+|++.|.....|..|+++|.+            +++|.|.+|++.|...        ..|..|+++    
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~----   67 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD------------ERPYTCDICHKAFRRQ--------DHLRDHRYI----   67 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC------------SCCCBCSSSCCBCSCH--------HHHHHHGGG----
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCC------------CCCcCCCCccchhCCH--------HHHHHHHHH----
Confidence            4578899999999999999999999999999            8999999998888754        889999999    


Q ss_pred             CCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          358 DHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       358 ~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                             |+++++|.|++|++.|.+...|..|+++|+++..
T Consensus        68 -------h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  101 (106)
T 2ee8_A           68 -------HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSS  101 (106)
T ss_dssp             -------SCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCC
T ss_pred             -------hCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCC
Confidence                   9999999999999999999999999999998644

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.68  E-value=9.2e-18  Score=143.30  Aligned_cols=68  Identities=19%  Similarity=0.239  Sum_probs=54.9

Q ss_pred             hhhhcCCCCccccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCC--CCCCCCcchhhhhccCcchhhh
Q 038961          274 FYKDSQKRSKFECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE--HSPDPTADSKLIKSINNENSAD  349 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~--~C~k~f~~~k~f~~~~~~~L~~  349 (457)
                      |++.|.++++|.|.+  |++.|.+...|..|+++|.+            +++|.|.  .|++.|...        ..|..
T Consensus        53 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~--------~~L~~  112 (124)
T 1ubd_C           53 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG------------DRPYVCPFDGCNKKFAQS--------TNLKS  112 (124)
T ss_dssp             HGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC------------CCCCCCCSTTCCCCCSST--------TTTHH
T ss_pred             HHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC------------CCceECCCCCCCCccCCH--------HHHHH
Confidence            445688899999986  99999999999999999999            8999995  598888754        88999


Q ss_pred             hhccccCCCCccccccCCCcccc
Q 038961          350 HFFVADCDDHRAETSCGAKKKHE  372 (457)
Q Consensus       350 H~~~~~~~~~~~~~~H~geKp~~  372 (457)
                      |+++           |+++|+++
T Consensus       113 H~~~-----------H~~~k~~q  124 (124)
T 1ubd_C          113 HILT-----------HAKAKNNQ  124 (124)
T ss_dssp             HHHH-----------HC------
T ss_pred             HHHH-----------HcccccCC
Confidence            9999           99998863

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.67  E-value=1e-17  Score=143.08  Aligned_cols=104  Identities=19%  Similarity=0.255  Sum_probs=89.7

Q ss_pred             cccccCCCCChhhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCCCcchhhh
Q 038961          262 LKRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLI  339 (457)
Q Consensus       262 ~~~~~~~~~~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f  339 (457)
                      .+.|.....+..|+++| ++++|.|.+|++.|.+...|..|+++|.+            +++|.|.+  |++.|...   
T Consensus        14 ~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~---   77 (124)
T 1ubd_C           14 TKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG------------EKPFQCTFEGCGKRFSLD---   77 (124)
T ss_dssp             CCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSC------------CCCEECCSTTCCCEESCH---
T ss_pred             cCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCC------------CCCeeCCCCCCcCccCCH---
Confidence            33444555566799999 89999999999999999999999999999            89999986  88877644   


Q ss_pred             hccCcchhhhhhccccCCCCccccccCCCccccCC--CCCCCCCCchhhhhhhhhccCCC
Q 038961          340 KSINNENSADHFFVADCDDHRAETSCGAKKKHECP--ICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       340 ~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                           ..|..|+++           |++++||.|+  .|++.|.+...|..|+++|+++.
T Consensus        78 -----~~l~~H~~~-----------h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           78 -----FNLRTHVRI-----------HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             -----HHHHHHHHH-----------HHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             -----HHHHHHHHH-----------hCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence                 889999999           9999999996  49999999999999999999753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.67  E-value=4.5e-18  Score=143.85  Aligned_cols=101  Identities=19%  Similarity=0.320  Sum_probs=90.4

Q ss_pred             cccccCCCCChhhhhhcCCCCccccC--CCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhh
Q 038961          262 LKRSTTDASDAEFYKDSQKRSKFECA--TCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLI  339 (457)
Q Consensus       262 ~~~~~~~~~~~~~~~~h~~ekpy~C~--~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f  339 (457)
                      .+.|.....+..|++.|.++++|.|.  .|++.|.+...|..|+++|.+            +++|.|.+|++.|...   
T Consensus        15 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~---   79 (119)
T 2jp9_A           15 NKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG------------VKPFQCKTCQRKFSRS---   79 (119)
T ss_dssp             CCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC------------CCCEECTTTCCEESCH---
T ss_pred             cchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC------------CCCccCCccCchhCCH---
Confidence            34445555566799999999999999  799999999999999999999            8999999988877744   


Q ss_pred             hccCcchhhhhhccccCCCCccccccCCCccccC--CCCCCCCCCchhhhhhhhhc
Q 038961          340 KSINNENSADHFFVADCDDHRAETSCGAKKKHEC--PICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       340 ~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C--~~Cgk~F~~~~~L~~H~r~H  393 (457)
                           ..|..|+++           |++++||.|  ++|++.|.+...|..|+++|
T Consensus        80 -----~~l~~H~~~-----------h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           80 -----DHLKTHTRT-----------HTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             -----HHHHHHHHH-----------HHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             -----HHHHHHHHH-----------hcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence                 889999999           999999999  89999999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.6e-17  Score=141.18  Aligned_cols=101  Identities=16%  Similarity=0.210  Sum_probs=88.6

Q ss_pred             ccCCCCChhhhhhcCCCCccccCCCCCccCCchhhhhhccc---cCCccCccccccCCCCCCccCCCCCCCCcchhhhhc
Q 038961          265 STTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRAS---HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKS  341 (457)
Q Consensus       265 ~~~~~~~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~---H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~  341 (457)
                      |.....+..|++.|.+++||.|.+|++.|.+...|..|++.   |.+            +++|.|.+|++.|...     
T Consensus        17 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~------------~~~~~C~~C~~~f~~~-----   79 (124)
T 2dlq_A           17 FLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS------------EQVFTCSVCQETFRRR-----   79 (124)
T ss_dssp             CSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC------------CCCEECSSSCCEESSH-----
T ss_pred             CCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC------------CCCeECCCCCCccCCH-----
Confidence            44445566799999999999999999999999999999985   466            8999999988877644     


Q ss_pred             cCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhh-hccCC
Q 038961          342 INNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKR-SHLLG  396 (457)
Q Consensus       342 ~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r-~H~~~  396 (457)
                         ..|..|+++           |++++||.|++|++.|.+...|..|++ .|.++
T Consensus        80 ---~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           80 ---MELRLHMVS-----------HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             ---HHHHHHHHH-----------HSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             ---HHHHHHHHH-----------cCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence               889999999           999999999999999999999999987 56653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.67  E-value=7e-18  Score=142.65  Aligned_cols=60  Identities=20%  Similarity=0.355  Sum_probs=53.2

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC--CCCCCCCcchhhhhccCcchhhhhh
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA--EHSPDPTADSKLIKSINNENSADHF  351 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C--~~C~k~f~~~k~f~~~~~~~L~~H~  351 (457)
                      |+++|.++++|.|.+|++.|.+...|..|+++|++            +++|.|  +.|++.|...        ..|..|+
T Consensus        57 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~--------~~L~~H~  116 (119)
T 2jp9_A           57 HQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG------------EKPFSCRWPSCQKKFARS--------DELVRHH  116 (119)
T ss_dssp             HHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT------------CCCEECCSTTCCCEESSH--------HHHHHHH
T ss_pred             HHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcC------------CCCeeCCCCCCccccCCH--------HHHHHHH
Confidence            45668889999999999999999999999999999            899999  7888777644        8899999


Q ss_pred             cc
Q 038961          352 FV  353 (457)
Q Consensus       352 ~~  353 (457)
                      ++
T Consensus       117 ~~  118 (119)
T 2jp9_A          117 NM  118 (119)
T ss_dssp             HT
T ss_pred             hc
Confidence            87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.67  E-value=1.1e-17  Score=134.62  Aligned_cols=86  Identities=19%  Similarity=0.367  Sum_probs=78.3

Q ss_pred             CCCccccC--CCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCC
Q 038961          280 KRSKFECA--TCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCD  357 (457)
Q Consensus       280 ~ekpy~C~--~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~  357 (457)
                      +++||.|.  .|++.|.....|..|+++|.+            +++|.|.+|++.|...        ..|..|+++    
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~----   56 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG------------QKPFQCRICMRNFSRS--------DHLTTHIRT----   56 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC------------CCCEECTTTCCEESCH--------HHHHHHHHH----
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC------------CCCccCCCCCcccCCH--------HHHHHHHHH----
Confidence            46899998  599999999999999999999            8999999988777644        889999999    


Q ss_pred             CCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          358 DHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       358 ~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                             |++++||.|++|++.|.+...|..|+++|+++
T Consensus        57 -------h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           57 -------HTGEKPFACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             -------HHCCCCEECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             -------cCCCCCccCCCCCchhCCHHHHHHHHHHhccc
Confidence                   99999999999999999999999999999974

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.5e-17  Score=133.06  Aligned_cols=88  Identities=25%  Similarity=0.318  Sum_probs=80.5

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCD  357 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~  357 (457)
                      .+++++|.|.+|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|+++    
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~----   57 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG------------EKPYSCPVCGLRFKRK--------DRMSYHVRS----   57 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCS------------SCSEECSSSCCEESCH--------HHHHHHHHH----
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCC------------CCCCcCCCCCCccCCH--------HHHHHHHHH----
Confidence            4678999999999999999999999999999            8999999988777644        889999999    


Q ss_pred             CCccccccCCC--ccccCCCCCCCCCCchhhhhhhh-hccCC
Q 038961          358 DHRAETSCGAK--KKHECPICLKVFPSGQALGGHKR-SHLLG  396 (457)
Q Consensus       358 ~~~~~~~H~ge--Kp~~C~~Cgk~F~~~~~L~~H~r-~H~~~  396 (457)
                             |.++  ++|.|++|++.|.+...|..|++ +|.+.
T Consensus        58 -------h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           58 -------HDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             -------HCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             -------hcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence                   8887  99999999999999999999985 78874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=7.8e-18  Score=141.06  Aligned_cols=88  Identities=19%  Similarity=0.232  Sum_probs=82.0

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADC  356 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~  356 (457)
                      .|+++++|.| .|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|+++   
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~---   59 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG------------LRPYGCGVCGKKFKMK--------HHLVGHMKI---   59 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC------------CCSEECTTTSCEESSS--------HHHHHHHTT---
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCC------------CcCccCCCCCcccCCH--------HHHHHHHHH---
Confidence            4899999999 999999999999999999999            8999999988777643        889999999   


Q ss_pred             CCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          357 DDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       357 ~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                              |.++++|.|++|++.|.+...|..|+++|...
T Consensus        60 --------h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           60 --------HTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             --------TCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             --------cCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence                    99999999999999999999999999999864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=1e-17  Score=132.14  Aligned_cols=82  Identities=24%  Similarity=0.458  Sum_probs=76.5

Q ss_pred             ccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccc
Q 038961          283 KFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAE  362 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~  362 (457)
                      ||.|.+|++.|.+...|..|+++|.+            +++|.|..|++.|...        ..|..|+++         
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~---------   51 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD------------TRPYPCQYCGKRFHQK--------SDMKKHTFI---------   51 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT------------CCCEECSSSCCEESSH--------HHHHHHHHH---------
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC------------CCCeeCCcCChhhCCH--------HHHHHHHHH---------
Confidence            69999999999999999999999999            8999999988777644        889999999         


Q ss_pred             cccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          363 TSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       363 ~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                        |++++||.|++|++.|.+...|..|+++|+|
T Consensus        52 --h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           52 --HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             --HHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             --hcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence              9999999999999999999999999999975

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.63  E-value=9.9e-17  Score=142.35  Aligned_cols=106  Identities=19%  Similarity=0.149  Sum_probs=92.4

Q ss_pred             cccccCCCCChhhhhh-cCCCCc--------cccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CC
Q 038961          262 LKRSTTDASDAEFYKD-SQKRSK--------FECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SP  330 (457)
Q Consensus       262 ~~~~~~~~~~~~~~~~-h~~ekp--------y~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~  330 (457)
                      .+.|.....+..|++. |.++++        |.|.+|++.|.+...|..|+++|.+            +++|.|.+  |+
T Consensus        32 ~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~   99 (155)
T 2rpc_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG------------EKPFPCPFPGCG   99 (155)
T ss_dssp             CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC------------CCSEECSCTTTC
T ss_pred             CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC------------CCcccCCcCCCC
Confidence            3444555556678887 877765        8999999999999999999999999            89999998  98


Q ss_pred             CCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC--CCCCCCCchhhhhhhhhccCCCC
Q 038961          331 DPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI--CLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       331 k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      +.|...        ..|..|+++           |++++||.|++  |++.|.+...|..|+++|+++..
T Consensus       100 ~~f~~~--------~~L~~H~~~-----------h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A          100 KIFARS--------ENLKIHKRT-----------HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             CEESCH--------HHHHHHHTT-----------TCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             CccCCH--------HHHHHHHHh-----------hCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            888754        889999999           99999999997  99999999999999999998644

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.1e-16  Score=133.64  Aligned_cols=91  Identities=18%  Similarity=0.225  Sum_probs=81.0

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      +++.|+++++|.|.+|++.|.....|..|+++|..              +|.|.+|++.|...        ..|..|+ +
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~--------------~~~C~~C~~~f~~~--------~~l~~H~-~   63 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN--------------AAVCPYCSLRFFSP--------ELKQEHE-S   63 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHH--------------SBCCTTTCCCBSSH--------HHHHHHH-H
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCCC--------------CccCCCCCCccCCH--------HHHHHHH-H
Confidence            35679999999999999999999999999999853              78999988888754        7899998 6


Q ss_pred             ccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhh-hccCCCC
Q 038961          354 ADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKR-SHLLGGN  398 (457)
Q Consensus       354 ~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~  398 (457)
                                 |++++||.|++|++.|.+...|..|++ +|.++..
T Consensus        64 -----------H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           64 -----------KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             -----------HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             -----------cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCC
Confidence                       899999999999999999999999997 8887544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.59  E-value=4.4e-16  Score=127.54  Aligned_cols=87  Identities=22%  Similarity=0.364  Sum_probs=79.0

Q ss_pred             cCCCCccccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCC--CCCCCCcchhhhhccCcchhhhhhcc
Q 038961          278 SQKRSKFECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE--HSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       278 h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~--~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      ...+++|.|.+  |++.|.....|..|+++|.+            +++|.|.  .|++.|...        ..|..|+++
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~--------~~l~~H~~~   69 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG------------EKPYKCTWEGCDWRFARS--------DELTRHYRK   69 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSC------------CCCEECCSSSCCCEESSH--------HHHHHHHHH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCC------------CCCeeCCCCCCCCccCCH--------HHHHHHHHH
Confidence            34678899997  99999999999999999999            8999996  588777644        889999999


Q ss_pred             ccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          354 ADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       354 ~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                                 |++++||.|++|++.|.+...|..|+++|++
T Consensus        70 -----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           70 -----------HTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             -----------HTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             -----------hCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence                       9999999999999999999999999999974

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.58  E-value=4.2e-16  Score=124.91  Aligned_cols=83  Identities=19%  Similarity=0.379  Sum_probs=76.7

Q ss_pred             CCccccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCC--CCCCCCcchhhhhccCcchhhhhhccccC
Q 038961          281 RSKFECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE--HSPDPTADSKLIKSINNENSADHFFVADC  356 (457)
Q Consensus       281 ekpy~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~--~C~k~f~~~k~f~~~~~~~L~~H~~~~~~  356 (457)
                      .++|.|.+  |++.|.+...|..|+++|.+            +++|.|.  .|++.|...        ..|..|+++   
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~--------~~l~~H~~~---   59 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG------------EKPYHCDWDGCGWKFARS--------DELTRHYRK---   59 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS------------SCCEECCSTTTCCEESSH--------HHHHHHHHH---
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC------------CCCcCCCCCCCCCccCCH--------HHHHHHHHH---
Confidence            57899999  99999999999999999999            8999997  588777644        889999999   


Q ss_pred             CCCccccccCCCccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          357 DDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       357 ~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                              |++++||.|++|++.|.+...|..|+++|+
T Consensus        60 --------h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           60 --------HTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             --------HHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             --------cCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence                    999999999999999999999999999995

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=5.6e-16  Score=117.16  Aligned_cols=58  Identities=17%  Similarity=0.218  Sum_probs=53.4

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      ||||.|.+|++.|...        +.|..|+++           |+|+|||.|++||++|.+...|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~--------~~L~~H~~~-----------Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDA--------SGLSRHRRA-----------HLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSH--------HHHHHHHHH-----------HHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCH--------HHHHHHHHH-----------hCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7999999988887754        899999999           999999999999999999999999999999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.53  E-value=3.9e-15  Score=123.46  Aligned_cols=35  Identities=26%  Similarity=0.438  Sum_probs=32.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.+
T Consensus        64 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             HGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred             HHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence            45668889999999999999999999999999999

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=3.7e-15  Score=131.79  Aligned_cols=104  Identities=18%  Similarity=0.213  Sum_probs=90.0

Q ss_pred             ccccCCCCChhhhh---hcCCCCccccCCC-----CCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCC
Q 038961          263 KRSTTDASDAEFYK---DSQKRSKFECATC-----NKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDP  332 (457)
Q Consensus       263 ~~~~~~~~~~~~~~---~h~~ekpy~C~~C-----~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~  332 (457)
                      +.|.....+..|++   +|.++++|.|.+|     ++.|.+...|..|+++|.+            +++|.|.+  |++.
T Consensus        11 ~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~   78 (155)
T 2gli_A           11 QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG------------EKPHKCTFEGCRKS   78 (155)
T ss_dssp             CBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC------------CCCCCCCSTTCCCC
T ss_pred             cccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC------------CCCccCCCCCCCCc
Confidence            33445555667887   7899999998753     4999999999999999999            89999986  9888


Q ss_pred             CcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC--CCCCCCCchhhhhhh-hhccCCC
Q 038961          333 TADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI--CLKVFPSGQALGGHK-RSHLLGG  397 (457)
Q Consensus       333 f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~~  397 (457)
                      |...        ..|..|+++           |++++||.|++  |++.|.+...|..|+ ++|.++.
T Consensus        79 f~~~--------~~l~~H~~~-----------h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~  127 (155)
T 2gli_A           79 YSRL--------ENLKTHLRS-----------HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK  127 (155)
T ss_dssp             CSSH--------HHHHHHHHH-----------TTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred             ccCH--------HHHHHHHHH-----------cCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            8754        889999999           99999999999  999999999999998 8998753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.1e-14  Score=118.46  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=33.0

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCc
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKI  309 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~  309 (457)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++
T Consensus        55 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           55 HLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             HHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             HHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence            556688899999999999999999999999999994

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.7e-14  Score=121.45  Aligned_cols=50  Identities=6%  Similarity=-0.017  Sum_probs=42.0

Q ss_pred             cccCCCCCcc--CCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          284 FECATCNKIF--HSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       284 y~C~~C~K~F--~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      +.|.+|++.|  .....|..|+++|++            ++||.|.+|++.|...        ..|..|+++
T Consensus        51 ~~C~~C~~~f~f~~~~~l~~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~  102 (115)
T 2dmi_A           51 ETDNNNPKRWSKPRKRSLLEMEGKEDA------------QKVLKCMYCGHSFESL--------QDLSVHMIK  102 (115)
T ss_dssp             CCCCCCCSCCSSCCCCCCCCCCCSCCC------------CSSCBCSSSCCBCSSH--------HHHHHHHHH
T ss_pred             ccCCCCCcccccccHHHHHHHhhccCC------------CcceECCCCCCccCCH--------HHHHHHHHH
Confidence            4588999888  888889999999988            8889999988777744        788888887

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.46  E-value=7.3e-15  Score=117.88  Aligned_cols=35  Identities=17%  Similarity=0.396  Sum_probs=32.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|.+++||.|.+|++.|.+...|..|+++|++
T Consensus        53 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           53 HIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             HHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred             HHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            45668889999999999999999999999999998

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.4e-14  Score=113.80  Aligned_cols=83  Identities=13%  Similarity=0.107  Sum_probs=71.3

Q ss_pred             ChhhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhh
Q 038961          271 DAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADH  350 (457)
Q Consensus       271 ~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H  350 (457)
                      +..|+++|++++||.|.+|++.|.+...|..|+++|.....        .+++|.|.+|++.|...        ..|..|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--------~~~~~~C~~C~~~f~~~--------~~L~~H   66 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF--------VPAAFVCSKCGKTFTRR--------NTMARH   66 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC--------CCCCEECSSSCCEESCH--------HHHHHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC--------CCcceECCCCCChhCCH--------HHHHHH
Confidence            44588999999999999999999999999999988776210        02799999988777644        889999


Q ss_pred             hccccCCCCccccccCCCccccCCCCCCCC
Q 038961          351 FFVADCDDHRAETSCGAKKKHECPICLKVF  380 (457)
Q Consensus       351 ~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F  380 (457)
                      +++           |++++++.|..|+..|
T Consensus        67 ~~~-----------h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           67 ADN-----------CAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHH-----------CCCCCSCCCCCCCCCC
T ss_pred             HHH-----------ccCCCCcccCCCCCCC
Confidence            999           9999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.8e-14  Score=112.96  Aligned_cols=73  Identities=18%  Similarity=0.274  Sum_probs=67.1

Q ss_pred             cCCCCccccCC--CCCccCCchhhhhhcc-ccCCccCccccccCCCCCCccCCC--CCCCCcchhhhhccCcchhhhhhc
Q 038961          278 SQKRSKFECAT--CNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLIKSINNENSADHFF  352 (457)
Q Consensus       278 h~~ekpy~C~~--C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f~~~~~~~L~~H~~  352 (457)
                      .+++++|.|..  |++.|.+...|..|++ +|.+            +++|.|.+  |++.|...        ..|..|++
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~------------~~~~~C~~~~C~k~f~~~--------~~L~~H~~   61 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH------------QKSFSCPEPACGKSFNFK--------KHLKEHMK   61 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS------------CCCEECSCTTTCCEESSH--------HHHHHHHH
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC------------CCCeECCCCCCcCccCCH--------HHHHHHHH
Confidence            46789999997  9999999999999999 7999            99999998  99888754        88999999


Q ss_pred             cccCCCCccccccCCCccccCCCCCCCCC
Q 038961          353 VADCDDHRAETSCGAKKKHECPICLKVFP  381 (457)
Q Consensus       353 ~~~~~~~~~~~~H~geKp~~C~~Cgk~F~  381 (457)
                      +           |++++||.|++|++.|.
T Consensus        62 ~-----------H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           62 L-----------HSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             H-----------HHTSCCCSCCSSSCCCC
T ss_pred             H-----------hCCCCCeeCCCCCCCCC
Confidence            9           99999999999999995

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.45  E-value=1.7e-14  Score=108.96  Aligned_cols=58  Identities=21%  Similarity=0.289  Sum_probs=53.6

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCc
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHR  360 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~  360 (457)
                      ||||.|.+|+++|.....|..|+++|++            ++||.|.+|++.|...        ++|..|+++       
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~------------ekp~~C~~C~k~F~~~--------~~L~~H~~~-------   54 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG------------YRPRSCPECGKCFRDQ--------SEVNRHLKV-------   54 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT------------CCCEECTTTCCEESSH--------HHHHHHGGG-------
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC------------CcCeECCCCCCCcCCH--------HHHHHHhCc-------
Confidence            7999999999999999999999999999            9999999988888754        999999999       


Q ss_pred             cccccCCCc
Q 038961          361 AETSCGAKK  369 (457)
Q Consensus       361 ~~~~H~geK  369 (457)
                          |+|++
T Consensus        55 ----Htgep   59 (60)
T 4gzn_C           55 ----HQNKP   59 (60)
T ss_dssp             ----GSCC-
T ss_pred             ----cCCCC
Confidence                99875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.44  E-value=1.8e-15  Score=121.85  Aligned_cols=83  Identities=14%  Similarity=0.125  Sum_probs=75.2

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCc
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHR  360 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~  360 (457)
                      ++||.|.+|++.|.+...|..|+++|.+            ++||.|..|++.|...        ..|..|+++       
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-------   53 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG------------EKPFACDICGRKFARS--------DERKRHRDI-------   53 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC------------CCCEECTTTCCEESSH--------HHHHHHHHH-------
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC------------CCCccCCCCCCccCCH--------HHHHHHHHH-------
Confidence            5899999999999999999999999999            9999999988877754        889999998       


Q ss_pred             cccccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          361 AETSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       361 ~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                          |.+ ++|.|+.|++.|.+...|..|++.+.+
T Consensus        54 ----h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           54 ----QHI-LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             ----HTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hCC-CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence                664 899999999999999999999877553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=5.6e-14  Score=115.80  Aligned_cols=77  Identities=14%  Similarity=0.091  Sum_probs=64.8

Q ss_pred             CccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCc-chhhhhccCcchhhhhhccccCCCCccccccCC-C
Q 038961          291 KIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTA-DSKLIKSINNENSADHFFVADCDDHRAETSCGA-K  368 (457)
Q Consensus       291 K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~-~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~g-e  368 (457)
                      ..+.....+..|+++|++            +++|.|.+|++.|. ..        ..|..|+++           |++ +
T Consensus         4 ~s~~~~~~~~~h~~~h~~------------~~~~~C~~C~k~f~~~~--------~~L~~H~~~-----------h~~~~   52 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHE------------RGEAVCPTCNVVTRKTL--------VGLKKHMEV-----------CQKLQ   52 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTT------------TSCCCCTTTCCCCSSCS--------HHHHHHHHH-----------HHHHH
T ss_pred             CCCCCCCcHHHHHHHhcc------------CCCcCCCCCCCChhhhH--------HHHHHHHHH-----------HcCCC
Confidence            345666778888888888            88888888777775 44        788889888           888 8


Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      +||.|++|++.|.+...|..|+++|+++..
T Consensus        53 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           53 DALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             HHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999998543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.42  E-value=2.2e-14  Score=113.46  Aligned_cols=78  Identities=21%  Similarity=0.223  Sum_probs=72.7

Q ss_pred             cccc--CCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCCCcchhhhhccCcchhhhhhccccCCC
Q 038961          283 KFEC--ATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLIKSINNENSADHFFVADCDD  358 (457)
Q Consensus       283 py~C--~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~  358 (457)
                      ||.|  ..|++.|.+...|..|+++|.+            +++|.|..  |++.|...        ..|..|+++     
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~~~C~~~f~~~--------~~l~~H~~~-----   55 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ------------QLPYECPHEGCDKRFSLP--------SRLKRHEKV-----   55 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT------------TCCEECCSTTCCCEESSH--------HHHHHHHHH-----
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC------------CCCeeCCCCCCcCccCCH--------HHHHHHHHH-----
Confidence            6999  9999999999999999999999            99999988  99888755        889999999     


Q ss_pred             CccccccCCCccccCCC---CCCCCCCchhhhhhhhhcc
Q 038961          359 HRAETSCGAKKKHECPI---CLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       359 ~~~~~~H~geKp~~C~~---Cgk~F~~~~~L~~H~r~H~  394 (457)
                            |++   |.|++   |++.|.+...|..|+++|+
T Consensus        56 ------h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           56 ------HAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ------HHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ------hCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                  888   99999   9999999999999999985

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.42  E-value=1.5e-14  Score=113.88  Aligned_cols=35  Identities=20%  Similarity=0.286  Sum_probs=31.2

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |++.|.++++|.|.+|++.|.+...|..|+++|+|
T Consensus        48 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           48 HTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            45668889999999999999999999999999975

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.9e-14  Score=118.78  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=37.0

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhcc-ccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |++ |++++||.|.+|++.|.+...|..|++ +|++            +++|.|..
T Consensus        61 H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~------------~~~~~~~~  103 (107)
T 1wjp_A           61 HES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ------------NNMAPTSG  103 (107)
T ss_dssp             HHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCC------------CCCCCCCC
T ss_pred             HHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCC------------CCCCCCCC
Confidence            443 888999999999999999999999997 9999            88888764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=6.1e-14  Score=113.70  Aligned_cols=29  Identities=28%  Similarity=0.359  Sum_probs=27.6

Q ss_pred             CCCcccccCCCCcccCCCCchhhHhhhcc
Q 038961            1 DREFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         1 ~~ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      .++++|.|.+|++.|.....|..||++|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   31 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS   31 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC
Confidence            36899999999999999999999999999

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3.1e-13  Score=105.80  Aligned_cols=66  Identities=18%  Similarity=0.361  Sum_probs=61.1

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADC  356 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~  356 (457)
                      .+.+++||.|.+|++.|.....|..|+++|.+            +++|.|.+|++.|...        ..|..|+++   
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~L~~H~~~---   68 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTG------------EKPYKCDECGKAFIQR--------SHLIGHHRV---   68 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC------------SCSEECSSSCCEESSH--------HHHHHHGGG---
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCC------------CcCeeCCCCCCccCCH--------HHHHHHHHH---
Confidence            47789999999999999999999999999999            8999999988877754        889999999   


Q ss_pred             CCCccccccCCCccccC
Q 038961          357 DDHRAETSCGAKKKHEC  373 (457)
Q Consensus       357 ~~~~~~~~H~geKp~~C  373 (457)
                              |++++||.|
T Consensus        69 --------H~~~~p~~C   77 (77)
T 2cot_A           69 --------HTGSGPSSG   77 (77)
T ss_dssp             --------SCCCCCCCC
T ss_pred             --------hCCCCCCCC
Confidence                    999999998

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.3e-13  Score=115.05  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=31.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|.++++|.|.+|++.|.....|..|+++|..
T Consensus        56 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           56 HMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            45568889999999999999999999999999876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=3.5e-13  Score=104.22  Aligned_cols=67  Identities=24%  Similarity=0.288  Sum_probs=59.2

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVF  380 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F  380 (457)
                      .+.++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++|++.|
T Consensus         4 ~~~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------h~~~~~~~C~~C~~~f   52 (72)
T 1x6e_A            4 GSSGIHSG------------EKPYGCVECGKAFSRS--------SILVQHQRV-----------HTGEKPYKCLECGKAF   52 (72)
T ss_dssp             CCCCTTTT------------CCCEECSSSCCEESSH--------HHHHHHHHG-----------GGCSCCEECSSSCCEE
T ss_pred             CCCcccCC------------CCCccCCCCCCccCCH--------HHHHHHHHh-----------cCCCCCeECCCCCccc
Confidence            45678888            8899999988777644        889999999           9999999999999999


Q ss_pred             CCchhhhhhhhhccCCCC
Q 038961          381 PSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       381 ~~~~~L~~H~r~H~~~~~  398 (457)
                      .+...|..|+++|+++..
T Consensus        53 ~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           53 SQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             SSHHHHHHHHHHHHSSSS
T ss_pred             CCHHHHHHHHHhcCCCCC
Confidence            999999999999998643

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=2.3e-13  Score=113.82  Aligned_cols=71  Identities=11%  Similarity=0.135  Sum_probs=62.1

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhcc-cc---CCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhh-
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRA-SH---KKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADH-  350 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~-~H---~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H-  350 (457)
                      ...+|++||.|.+|++.|.....|..|++ +|   ++            ++||.|+.|++.|...        ..|..| 
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~------------ekpf~C~~Cgk~F~~~--------~~L~~H~   70 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL------------NSSYVCVECNFLTKRY--------DALSEHN   70 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCC------------SCCEEETTTTEEESST--------HHHHTHH
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCC------------CCCcCCCCCCcccCCH--------HHHHHHH
Confidence            34679999999999999999999999997 59   55            8999999987777644        889999 


Q ss_pred             hccccCCCCccccccCCCccccCCCCC
Q 038961          351 FFVADCDDHRAETSCGAKKKHECPICL  377 (457)
Q Consensus       351 ~~~~~~~~~~~~~~H~geKp~~C~~Cg  377 (457)
                      +++           |+|+|||.|.++.
T Consensus        71 ~r~-----------Htgekpy~C~~~~   86 (102)
T 2ghf_A           71 LKY-----------HPGEENFKLTMVK   86 (102)
T ss_dssp             HHT-----------STTCCCEEEEECC
T ss_pred             HHh-----------cCCCCCeeCCccc
Confidence            899           9999999999854

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.3e-13  Score=104.43  Aligned_cols=68  Identities=22%  Similarity=0.266  Sum_probs=52.5

Q ss_pred             hhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhc-cccCCCCccccccCCC-ccccCCC
Q 038961          298 ALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFF-VADCDDHRAETSCGAK-KKHECPI  375 (457)
Q Consensus       298 ~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~-~~~~~~~~~~~~H~ge-Kp~~C~~  375 (457)
                      .|..|+++|++            ++||.|.+|++.|...        ..|..|++ .           |+++ ++|.|++
T Consensus         2 s~~~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~~-----------h~~~~~~~~C~~   50 (77)
T 2ct1_A            2 SSGSSGRTHSG------------EKPYECYICHARFTQS--------GTMKMHILQK-----------HTENVAKFHCPH   50 (77)
T ss_dssp             CCCCCCCCCSC------------CCSEECTTTCCEESCH--------HHHHHHHHHH-----------SSSSCSSEECSS
T ss_pred             CCCccccccCC------------CCCeECCCcCchhCCH--------HHHHHHHHHh-----------cCCCCCccCCCC
Confidence            45667777777            7777777766666533        66777775 4           6664 8999999


Q ss_pred             CCCCCCCchhhhhhhhhccCC
Q 038961          376 CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       376 Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++.|.+...|..|+++|.+.
T Consensus        51 C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           51 CDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             SSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccCCHHHHHHHHHHhCCC
Confidence            999999999999999987764

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.30  E-value=4.7e-13  Score=109.32  Aligned_cols=35  Identities=26%  Similarity=0.594  Sum_probs=31.9

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++
T Consensus        66 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           66 HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            55678899999999999999999999999999974

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=7.8e-13  Score=109.06  Aligned_cols=74  Identities=14%  Similarity=0.108  Sum_probs=63.7

Q ss_pred             CccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCC-cchhhhhccCcchhhhhhccccCCCCccccccCCCc
Q 038961          291 KIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPT-ADSKLIKSINNENSADHFFVADCDDHRAETSCGAKK  369 (457)
Q Consensus       291 K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f-~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geK  369 (457)
                      .+|.....|..|+++|.+            +++|.|+.|++.| ...        ..|..|+++           | +++
T Consensus        14 ~~~~~~~~~~~~~~~~~~------------~~~~~C~~C~k~F~~~~--------~~L~~H~~~-----------h-~~k   61 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVD------------KGSVSCPTCQAVGRKTI--------EGLKKHMEN-----------C-KQE   61 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHH------------TSCEECTTTCSCEESSH--------HHHHHHHHH-----------H-CCC
T ss_pred             CCCCCchHHHHHHHHhcC------------CCCcCCCCCCCCcccCH--------HHHHHHHHH-----------H-CCC
Confidence            356777888889988888            8899999988777 644        789999998           9 899


Q ss_pred             cccCCCCCCCCCCchhhhhh-hhhccCC
Q 038961          370 KHECPICLKVFPSGQALGGH-KRSHLLG  396 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H-~r~H~~~  396 (457)
                      ||.|.+|++.|.+...|..| +++|++.
T Consensus        62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           62 MFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            99999999999999999999 9999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.28  E-value=6.8e-13  Score=106.00  Aligned_cols=34  Identities=24%  Similarity=0.553  Sum_probs=30.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHK  307 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~  307 (457)
                      |++.|++++||.|.+|++.|.+...|..|+++|.
T Consensus        56 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           56 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            4566888999999999999999999999999984

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.2e-12  Score=102.30  Aligned_cols=71  Identities=15%  Similarity=0.194  Sum_probs=62.0

Q ss_pred             hhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCC----ccccC
Q 038961          298 ALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAK----KKHEC  373 (457)
Q Consensus       298 ~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~ge----Kp~~C  373 (457)
                      .|..|+++|++            ++||.|.+|++.|...        ..|..|+++           |.+.    ++|.|
T Consensus         2 s~~~H~~~H~~------------~k~~~C~~C~~~f~~~--------~~l~~H~~~-----------~~~~~~~~~~~~C   50 (86)
T 1x6h_A            2 SSGSSGRTHTG------------EKPYACSHCDKTFRQK--------QLLDMHFKR-----------YHDPNFVPAAFVC   50 (86)
T ss_dssp             TTTCCSTTCCC------------CCCEECSSSSCEESSH--------HHHHHHHHH-----------TTCSSCCCCCEEC
T ss_pred             CcccccceecC------------CCCCcCCCCCCccCCH--------HHHHHHHHH-----------hcCCcCCCcceEC
Confidence            57899999999            9999999988877754        889999987           5444    89999


Q ss_pred             CCCCCCCCCchhhhhhhhhccCCCCC
Q 038961          374 PICLKVFPSGQALGGHKRSHLLGGNE  399 (457)
Q Consensus       374 ~~Cgk~F~~~~~L~~H~r~H~~~~~~  399 (457)
                      ++|++.|.+...|..|+++|+++...
T Consensus        51 ~~C~~~f~~~~~L~~H~~~h~~~~~~   76 (86)
T 1x6h_A           51 SKCGKTFTRRNTMARHADNCAGPDGV   76 (86)
T ss_dssp             SSSCCEESCHHHHHHHHHHCCCCCSC
T ss_pred             CCCCChhCCHHHHHHHHHHccCCCCc
Confidence            99999999999999999999986554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.27  E-value=1.2e-12  Score=101.51  Aligned_cols=64  Identities=16%  Similarity=0.274  Sum_probs=58.9

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADC  356 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~  356 (457)
                      .+.++++|.|.+|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|+++   
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~---   67 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTG------------EKPYRCNICGAQFNRP--------ANLKTHTRI---   67 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC------------CCSEECTTTCCEESCH--------HHHHHHHHH---
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCC------------CCCEECCCCCchhCCH--------HHHHHHHHh---
Confidence            47789999999999999999999999999999            9999999988877644        889999999   


Q ss_pred             CCCccccccCCCccc
Q 038961          357 DDHRAETSCGAKKKH  371 (457)
Q Consensus       357 ~~~~~~~~H~geKp~  371 (457)
                              |+++|||
T Consensus        68 --------H~~~kp~   74 (74)
T 2lce_A           68 --------HSGEKPY   74 (74)
T ss_dssp             --------HCCSCCC
T ss_pred             --------cCCCCCC
Confidence                    9999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.8e-12  Score=101.45  Aligned_cols=63  Identities=24%  Similarity=0.397  Sum_probs=48.5

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCD  357 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~  357 (457)
                      |++++||.|.+|++.|.....|..|+++|.+                                                 
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-------------------------------------------------   32 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAE-------------------------------------------------   32 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHH-------------------------------------------------
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhc-------------------------------------------------
Confidence            6677777777777777777777777776665                                                 


Q ss_pred             CCccccccCCCccccCCCCCCCCCCchhhhhhhh-hccCC
Q 038961          358 DHRAETSCGAKKKHECPICLKVFPSGQALGGHKR-SHLLG  396 (457)
Q Consensus       358 ~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r-~H~~~  396 (457)
                             -.++++|.|++|++.|.+...|..|++ .|.+.
T Consensus        33 -------~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A           33 -------TVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             -------HTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             -------cCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence                   113688999999999999999999985 55554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=104.04  Aligned_cols=57  Identities=18%  Similarity=0.208  Sum_probs=45.5

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhh-hhccCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHK-RSHLLG  396 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~-r~H~~~  396 (457)
                      .++|.|++|++.|...        ..|..|+++           |+++|||.|++|++.|.+...|..|+ ++|.++
T Consensus        26 ~~~h~C~~Cgk~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           26 AECHLCPVCGESFASK--------GAQERHLRL-----------LHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CTTEECTTSCCEESSH--------HHHHHHHHT-----------TSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCEECCCCCCCcCcH--------HHHhhhhhh-----------ccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            6777788776666643        778888887           88888999999999999999999995 678764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.22  E-value=3.5e-13  Score=115.81  Aligned_cols=83  Identities=17%  Similarity=0.166  Sum_probs=71.5

Q ss_pred             CCCccccCCCCCccC------CchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          280 KRSKFECATCNKIFH------SYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       280 ~ekpy~C~~C~K~F~------s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      .++++.|.+|.+.|.      ....|..|+ .|++            ++||.|.+|++.|...        ..|..|+++
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~------------~~~~~C~~C~k~f~~~--------~~l~~H~~~   96 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA------------ISQFVCPLCLMPFSSS--------VSLKQHIRY   96 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH------------HCSEECTTTCCEESSH--------HHHHHHHHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCC------------CCCeECCCCCcccCCH--------hHHHHHHHH
Confidence            456788988887776      556677776 6888            8999999988887754        889999999


Q ss_pred             ccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          354 ADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       354 ~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                                 |  ++||.|++|++.|.+...|..|+++|++.
T Consensus        97 -----------H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           97 -----------T--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -----------T--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             -----------C--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence                       8  89999999999999999999999999974

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=2.4e-12  Score=97.41  Aligned_cols=62  Identities=19%  Similarity=0.477  Sum_probs=44.9

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccc-cCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccc
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRAS-HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVA  354 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~-H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~  354 (457)
                      ++|++++||.|.+|++.|.+...|..|+++ |.                                               
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~-----------------------------------------------   35 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK-----------------------------------------------   35 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS-----------------------------------------------
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcC-----------------------------------------------
Confidence            456777777777777777777777777665 31                                               


Q ss_pred             cCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          355 DCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       355 ~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                                 ++++||.|++|++.|.+...|..|+++|++
T Consensus        36 -----------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           36 -----------RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -----------SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             -----------CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence                       245678888888888888888888887765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=5.4e-12  Score=96.77  Aligned_cols=59  Identities=8%  Similarity=0.039  Sum_probs=52.8

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      +++|.|.+|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|+++..
T Consensus         7 ~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSK--------AALRIHERI-----------HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCSEECSSSSCEESSH--------HHHHHHHGG-----------GCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCeECCCCCcccCCH--------HHHHHHHHH-----------cCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            7889999877777644        889999999           9999999999999999999999999999998644

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=8.8e-12  Score=97.38  Aligned_cols=58  Identities=22%  Similarity=0.307  Sum_probs=53.7

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      +++|.|.+|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|+++.
T Consensus        16 ~~~~~C~~C~~~f~~~--------~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           16 RRRYKCDECGKSFSHS--------SDLSKHRRT-----------HTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             SCSSBCSSSCCBCSCH--------HHHHHHHTT-----------TCCSCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             CCCEECCCCCcccCCH--------HHHHHHHHH-----------cCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            8999999998888754        889999999           999999999999999999999999999999853

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=4.7e-12  Score=97.08  Aligned_cols=64  Identities=16%  Similarity=0.161  Sum_probs=58.2

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADC  356 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~  356 (457)
                      .|++++||.|.+|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|+++   
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C~~~f~~~--------~~L~~H~~~---   59 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT------------DRPFKCNYCSFDTKQP--------SNLSKHMKK---   59 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC------------SCSEECSSSSCEESSH--------HHHHHHHHH---
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC------------CCCEeCCCCCCccCCH--------HHHHHHHHH---
Confidence            37899999999999999999999999999999            8999999988877744        889999999   


Q ss_pred             CCCccccccCCCccc
Q 038961          357 DDHRAETSCGAKKKH  371 (457)
Q Consensus       357 ~~~~~~~~H~geKp~  371 (457)
                              |.+++|.
T Consensus        60 --------h~~~~p~   66 (70)
T 1x5w_A           60 --------FHGDMSG   66 (70)
T ss_dssp             --------HHSSSCC
T ss_pred             --------HhCCCCC
Confidence                    8888875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.1e-12  Score=99.00  Aligned_cols=69  Identities=14%  Similarity=0.064  Sum_probs=59.3

Q ss_pred             CChhhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhh
Q 038961          270 SDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSAD  349 (457)
Q Consensus       270 ~~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~  349 (457)
                      .+..|+++|.+++||.|.+|++.|.+...|..                   +++|.|..|++.|.      ..  ..|..
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------------------~~~~~C~~C~~~f~------~~--~~l~~   57 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------------------RKTPMCEKCRKDSC------QE--AALNK   57 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------------------SSSCCCHHHHHTCS------CC--CSSCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------------------CCCCCCCCCChhhc------CH--HHHHH
Confidence            45568899999999999999999999998876                   36899999665554      33  89999


Q ss_pred             hhccccCCCCccccccCCCccccCCCC
Q 038961          350 HFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       350 H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      |+++           |++++||.|++|
T Consensus        58 H~~~-----------H~~~~~~~C~~C   73 (73)
T 2ctu_A           58 DEGN-----------ESGKKTSGPSSG   73 (73)
T ss_dssp             CSSC-----------CCCCCCSSCCCC
T ss_pred             HHHh-----------hcCCCCCCCCCC
Confidence            9999           999999999998

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.18  E-value=9.6e-12  Score=96.40  Aligned_cols=57  Identities=23%  Similarity=0.257  Sum_probs=53.3

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +++|.|..|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|+++
T Consensus        15 ~~~~~C~~C~k~f~~~--------~~l~~H~~~-----------H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           15 DKPYKCDRCQASFRYK--------GNLASHKTV-----------HTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCSBCCTTSSCCBSCH--------HHHHHHHHH-----------HCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             CCCeECCCCCceeCCH--------HHHHHHHHH-----------cCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            8999999998888754        889999999           99999999999999999999999999999975

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=5.4e-12  Score=97.43  Aligned_cols=59  Identities=15%  Similarity=0.247  Sum_probs=54.3

Q ss_pred             hhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       275 ~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      .++|++++||.|.+|++.|.....|..|+++|.+            ++||.|.+|++.|...        ..|..|+++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~L~~H~~~   64 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG------------EKPYKCLECGKAFSQN--------SGLINHQRI   64 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGC------------SCCEECSSSCCEESSH--------HHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCC------------CCCeECCCCCcccCCH--------HHHHHHHHh
Confidence            4679999999999999999999999999999999            9999999988877644        889999998

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=9.2e-12  Score=102.58  Aligned_cols=71  Identities=13%  Similarity=0.249  Sum_probs=61.9

Q ss_pred             ChhhhhhcCCCCccccCCCCCcc-CCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhh
Q 038961          271 DAEFYKDSQKRSKFECATCNKIF-HSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSAD  349 (457)
Q Consensus       271 ~~~~~~~h~~ekpy~C~~C~K~F-~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~  349 (457)
                      +..|+++|.+++||.|.+|++.| .+...|..|+++| +            ++||.|.+|++.|...        ..|..
T Consensus        22 ~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~------------~k~~~C~~Cgk~F~~~--------~~L~~   80 (96)
T 2ctd_A           22 EEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K------------QEMFTCHHCGKQLRSL--------AGMKY   80 (96)
T ss_dssp             HHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C------------CCCCCCSSSCCCCSSH--------HHHHH
T ss_pred             HHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C------------CCCeECCCCCCeeCCH--------HHHHH
Confidence            34577889999999999999999 9999999999999 9            9999999999888754        88999


Q ss_pred             h-hccccCCCCccccccCCCccccC
Q 038961          350 H-FFVADCDDHRAETSCGAKKKHEC  373 (457)
Q Consensus       350 H-~~~~~~~~~~~~~~H~geKp~~C  373 (457)
                      | +++           |+++..|.+
T Consensus        81 H~~~~-----------H~~~p~~~~   94 (96)
T 2ctd_A           81 HVMAN-----------HNSLPSGPS   94 (96)
T ss_dssp             HHHHH-----------TCCCSSCSC
T ss_pred             HhHHh-----------cCCCCCCCC
Confidence            9 888           887655544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.8e-12  Score=102.23  Aligned_cols=74  Identities=15%  Similarity=0.314  Sum_probs=64.4

Q ss_pred             ChhhhhhcCCCCccccCCCCCccC-CchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhh
Q 038961          271 DAEFYKDSQKRSKFECATCNKIFH-SYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSAD  349 (457)
Q Consensus       271 ~~~~~~~h~~ekpy~C~~C~K~F~-s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~  349 (457)
                      ...|+++|+++++|.|.+|++.|. ....|..|+++|++.           +++|.|.+|++.|...        ..|..
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~-----------~~~~~C~~C~k~F~~~--------~~L~~   72 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL-----------QDALKCQHCRKQFKSK--------AGLNY   72 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH-----------HHHHSCSSSCCCCSCH--------HHHHH
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC-----------CCCEECCCCCCccCCH--------HHHHH
Confidence            345889999999999999999999 999999999999861           4789999998888754        88999


Q ss_pred             hhccccCCCCccccccCCCccccCC
Q 038961          350 HFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       350 H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      |+++           |++++|+...
T Consensus        73 H~~~-----------h~~~kp~~~~   86 (98)
T 2gqj_A           73 HTMA-----------EHSAKPSDAE   86 (98)
T ss_dssp             HHHH-----------HSCSCSSCCC
T ss_pred             HHHH-----------HcCCCCCCCC
Confidence            9999           9999986543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=1.3e-11  Score=96.37  Aligned_cols=63  Identities=14%  Similarity=0.235  Sum_probs=55.4

Q ss_pred             ChhhhhhcCCCCccccCCCCCccCCchhhhhhcc-ccCCccCccccccCCCC-CCccCCCCCCCCcchhhhhccCcchhh
Q 038961          271 DAEFYKDSQKRSKFECATCNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSE-NSIEAEHSPDPTADSKLIKSINNENSA  348 (457)
Q Consensus       271 ~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~ce-kp~~C~~C~k~f~~~k~f~~~~~~~L~  348 (457)
                      +..|+++|++++||.|.+|++.|.....|..|++ .|.+            + ++|.|.+|++.|...        ..|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~------------~~~~~~C~~C~~~f~~~--------~~L~   62 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE------------NVAKFHCPHCDTVIARK--------SDLG   62 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS------------SCSSEECSSSSCEESSH--------HHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC------------CCCccCCCCCCCccCCH--------HHHH
Confidence            3458899999999999999999999999999997 6876            4 899999988777644        8899


Q ss_pred             hhhcc
Q 038961          349 DHFFV  353 (457)
Q Consensus       349 ~H~~~  353 (457)
                      .|+++
T Consensus        63 ~H~~~   67 (77)
T 2ct1_A           63 VHLRK   67 (77)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99997

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.13  E-value=1e-11  Score=90.95  Aligned_cols=56  Identities=16%  Similarity=0.087  Sum_probs=48.4

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ++||.|.+|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~--------~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSN--------YYLNIHLRT-----------HTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCH--------HHHHHHHHH-----------HHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCCh--------HHHHHHHHH-----------cCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            6899999988887754        889999999           9999999999999999999999999999864

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=2.8e-11  Score=89.63  Aligned_cols=57  Identities=21%  Similarity=0.244  Sum_probs=51.0

Q ss_pred             CCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhh-hhccCCC
Q 038961          322 NSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHK-RSHLLGG  397 (457)
Q Consensus       322 kp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~-r~H~~~~  397 (457)
                      +||.|..|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+ ++|.++.
T Consensus         1 k~~~C~~C~~~f~~~--------~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQ--------EHLKRHYRS-----------HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCH--------HHHHHHHHT-----------TTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCH--------HHHHHHHHH-----------hCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            589999988888754        889999999           99999999999999999999999996 7898753

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.12  E-value=2e-11  Score=89.31  Aligned_cols=55  Identities=15%  Similarity=0.108  Sum_probs=50.1

Q ss_pred             CccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          323 SIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       323 p~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ||.|..|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|.++
T Consensus         1 p~~C~~C~~~f~~~--------~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKP--------SMLKKHIRT-----------HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSH--------HHHHHHHHH-----------TSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCH--------HHHHHHHHh-----------cCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            68899988777754        889999999           99999999999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.10  E-value=2.7e-11  Score=97.80  Aligned_cols=58  Identities=17%  Similarity=0.146  Sum_probs=52.1

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhh-cc
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHF-FV  353 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~-~~  353 (457)
                      ..+...++|.|.+|++.|.+...|..|+++|++            ++||.|.+|++.|...        ..|..|+ ++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~~   79 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHA------------AQVFPCKYCPATFYSS--------PGLTRHINKC   79 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSC------------SSSEECTTSSCEESSH--------HHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccC------------CCccCCCCCCCEeCCH--------HHHHHhCccc
Confidence            457788999999999999999999999999999            9999999988887754        8999997 45

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=1.2e-11  Score=103.30  Aligned_cols=63  Identities=14%  Similarity=0.143  Sum_probs=54.2

Q ss_pred             CCcccccCCCCcccCCCCchhhHhh-hccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCccc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMR-SHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSS   80 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~~~   80 (457)
                      |+++|.|.+|+|+|.....|..||| +|++.                             .+++|               
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~-----------------------------~~ekp---------------   50 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNV-----------------------------VLNSS---------------   50 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSC-----------------------------CCSCC---------------
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCC-----------------------------CCCCC---------------
Confidence            7899999999999999999999998 59510                             04566               


Q ss_pred             ccccccccCCccCCcc-----cccccccccccCC
Q 038961           81 QQQQQLCGKGFVSWKP-----MKCNSEKDRVSNN  109 (457)
Q Consensus        81 ~~~C~~CgK~F~s~~~-----mr~Hs~~~~~~~~  109 (457)
                       |.|.+|||.|.+...     |++|+++++|.|.
T Consensus        51 -f~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           51 -YVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             -EEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             -cCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence             789999999999887     4778999999996

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=3.8e-11  Score=92.50  Aligned_cols=55  Identities=20%  Similarity=0.383  Sum_probs=43.3

Q ss_pred             CCCccCC--CCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          321 ENSIEAE--HSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       321 ekp~~C~--~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      +++|.|.  .|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|+
T Consensus        17 ~~~~~C~~~~C~k~f~~~--------~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRS--------DELTRHIRI-----------HTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSH--------HHHHHHHHH-----------HHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCH--------HHHHHHHHh-----------hCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            6777775  466655533        677777777           778888999999999999999999999885

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.03  E-value=2.4e-11  Score=95.71  Aligned_cols=25  Identities=36%  Similarity=0.498  Sum_probs=24.2

Q ss_pred             cccc--CCCCcccCCCCchhhHhhhcc
Q 038961            5 KHVC--KFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         5 ~~~C--k~C~K~F~~~~~L~~HmR~H~   29 (457)
                      ||+|  .+|++.|.....|..||++|+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~   27 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT   27 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC
Confidence            6899  999999999999999999999

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.00  E-value=1.1e-10  Score=85.27  Aligned_cols=51  Identities=16%  Similarity=0.193  Sum_probs=47.3

Q ss_pred             ccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          283 KFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      ||.|.+|++.|.+...|..|+++|.+            ++||.|.+|++.|...        ..|..|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~   51 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD------------VRPYHCTYCNFSFKTK--------GNLTKHMKS   51 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS------------CCCEECSSSSCEESSH--------HHHHHHHHS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC------------CCCccCCCCCchhcCH--------HHHHHHHHH
Confidence            69999999999999999999999999            9999999988877744        889999999

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.00  E-value=6e-11  Score=86.73  Aligned_cols=54  Identities=26%  Similarity=0.311  Sum_probs=46.3

Q ss_pred             CCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          280 KRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       280 ~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      |++||.|.+|++.|.+...|..|+++|++            ++||.|.+|++.|...        ..|..|+++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~   54 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG------------EKPYKCEFCEYAAAQK--------TSLRYHLER   54 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC------------CCCEECSSSSCEESSH--------HHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC------------CCCcCCCCCcchhCCH--------HHHHHHHHH
Confidence            46899999999999999999999999999            9999999988777644        889999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.8e-10  Score=80.59  Aligned_cols=44  Identities=20%  Similarity=0.430  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC------------CCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.99  E-value=1.8e-10  Score=80.59  Aligned_cols=44  Identities=16%  Similarity=0.278  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS------------SSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC------------CCCcCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=81.31  Aligned_cols=45  Identities=18%  Similarity=0.274  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          273 EFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       273 ~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      .|+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS------------SSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC------------CCCCCCCCC
Confidence            377889999999999999999999999999999999            899999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2e-10  Score=80.53  Aligned_cols=44  Identities=16%  Similarity=0.285  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG------------EKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS------------CCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            56889999999999999999999999999999999            899999886

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=80.64  Aligned_cols=44  Identities=23%  Similarity=0.388  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT------------CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=80.85  Aligned_cols=44  Identities=23%  Similarity=0.373  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC------------SSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.99  E-value=1.8e-10  Score=80.49  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG------------VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS------------CCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.9e-10  Score=80.47  Aligned_cols=44  Identities=18%  Similarity=0.284  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTT------------CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            66889999999999999999999999999999999            899999886

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.98  E-value=1.7e-10  Score=80.88  Aligned_cols=44  Identities=23%  Similarity=0.333  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC------------CSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=80.32  Aligned_cols=44  Identities=18%  Similarity=0.339  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS------------CCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.2e-10  Score=80.30  Aligned_cols=44  Identities=20%  Similarity=0.281  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG------------EKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC------------SCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCC------------CCCCCCCCC
Confidence            66889999999999999999999999999999999            899999886

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=80.51  Aligned_cols=44  Identities=20%  Similarity=0.372  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG------------KKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS------------CCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=80.72  Aligned_cols=44  Identities=18%  Similarity=0.373  Sum_probs=41.9

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC------------CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.4e-10  Score=80.36  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=41.3

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE------------EKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS------------SCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            46789999999999999999999999999999999            899999875

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=80.15  Aligned_cols=44  Identities=23%  Similarity=0.270  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG------------ENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT------------SCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.97  E-value=2.3e-10  Score=79.98  Aligned_cols=44  Identities=18%  Similarity=0.292  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG------------EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS------------CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=80.49  Aligned_cols=44  Identities=16%  Similarity=0.349  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG------------VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC------------CCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=80.11  Aligned_cols=44  Identities=18%  Similarity=0.351  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT------------CSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=1.1e-10  Score=91.15  Aligned_cols=64  Identities=25%  Similarity=0.385  Sum_probs=57.5

Q ss_pred             CCcccccCC--CCcccCCCCchhhHhh-hccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCc
Q 038961            2 REFKHVCKF--CSKSFPCGRSLGGHMR-SHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENN   78 (457)
Q Consensus         2 ~ek~~~Ck~--C~K~F~~~~~L~~HmR-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~   78 (457)
                      ++++|.|..  |++.|.....|..||+ +|+                                +++|             
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~--------------------------------~~~~-------------   38 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI--------------------------------HQKS-------------   38 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGG--------------------------------SCCC-------------
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhC--------------------------------CCCC-------------
Confidence            678999998  9999999999999999 799                                5666             


Q ss_pred             cccccccc--ccCCccCCcc----cccccccccccCC--CCCc
Q 038961           79 SSQQQQQL--CGKGFVSWKP----MKCNSEKDRVSNN--NTSL  113 (457)
Q Consensus        79 ~~~~~C~~--CgK~F~s~~~----mr~Hs~~~~~~~~--~~~f  113 (457)
                         |.|.+  ||+.|.+..+    |++|+++++|.|.  ++.|
T Consensus        39 ---~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           39 ---FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             ---EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             ---eECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence               77999  9999999888    8889999999998  7666

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.97  E-value=2e-10  Score=80.48  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS------------CCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.97  E-value=2.1e-10  Score=80.34  Aligned_cols=44  Identities=18%  Similarity=0.408  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC------------CCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=80.63  Aligned_cols=44  Identities=18%  Similarity=0.243  Sum_probs=41.9

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC------------CCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=80.38  Aligned_cols=44  Identities=18%  Similarity=0.376  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC------------CCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.2e-10  Score=80.25  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC------------SCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=79.72  Aligned_cols=44  Identities=18%  Similarity=0.260  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC------------CSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999886

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=80.05  Aligned_cols=44  Identities=20%  Similarity=0.343  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC------------CCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=79.90  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS------------CCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.96  E-value=2.6e-10  Score=92.13  Aligned_cols=71  Identities=13%  Similarity=0.058  Sum_probs=55.9

Q ss_pred             CCccccCCCCCccCCchhhhhhccc-cCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCC
Q 038961          281 RSKFECATCNKIFHSYQALGGHRAS-HKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDH  359 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~-H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~  359 (457)
                      ...|.|.+|++.|.....|..|+++ |.+.++...+.   | ++|.|.+|++.|...        ..|..|+++      
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~---c-~~~~C~~C~k~f~~~--------~~L~~H~~~------   84 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV---C-YWEECPREGKSFKAK--------YKLVNHIRV------   84 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCC---C-CCTTCSSTTCCCSSH--------HHHHHHHHH------
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccc---e-eccCCCCCCcccCCH--------HHHHHHHHh------
Confidence            3458899999999999999999998 98822100000   0 129999998888754        889999999      


Q ss_pred             ccccccCCCccccCC
Q 038961          360 RAETSCGAKKKHECP  374 (457)
Q Consensus       360 ~~~~~H~geKp~~C~  374 (457)
                           |++++||.|+
T Consensus        85 -----H~~~k~~~C~   94 (95)
T 2ej4_A           85 -----HTGEKSGPSS   94 (95)
T ss_dssp             -----HHTCCCCSSC
T ss_pred             -----cCCCCCCCCC
Confidence                 9999999996

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=79.88  Aligned_cols=44  Identities=18%  Similarity=0.294  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG------------ERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC------------CSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.7e-10  Score=79.70  Aligned_cols=44  Identities=20%  Similarity=0.363  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG------------EKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC------------CCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=79.99  Aligned_cols=44  Identities=20%  Similarity=0.308  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK------------QKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC------------CCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            77889999999999999999999999999999999            899999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=80.54  Aligned_cols=44  Identities=18%  Similarity=0.377  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG------------GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS------------CCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=80.45  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT------------SCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=79.78  Aligned_cols=44  Identities=16%  Similarity=0.234  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD------------DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS------------CCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.4e-10  Score=79.86  Aligned_cols=44  Identities=20%  Similarity=0.254  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG------------EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC------------SCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.7e-10  Score=80.81  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR------------EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS------------TTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=80.22  Aligned_cols=44  Identities=20%  Similarity=0.373  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG------------YRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC------------CCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=80.23  Aligned_cols=44  Identities=18%  Similarity=0.298  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG------------ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS------------CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=80.56  Aligned_cols=44  Identities=20%  Similarity=0.376  Sum_probs=41.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC------------CSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.5e-10  Score=79.94  Aligned_cols=44  Identities=20%  Similarity=0.306  Sum_probs=41.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG------------EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCC------------SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCC------------CCCCCCCCC
Confidence            56889999999999999999999999999999999            899999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=3.1e-10  Score=83.90  Aligned_cols=52  Identities=19%  Similarity=0.314  Sum_probs=47.1

Q ss_pred             CccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhh-cc
Q 038961          282 SKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHF-FV  353 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~-~~  353 (457)
                      +||.|.+|++.|.+...|..|+++|++            ++||.|..|++.|...        ..|..|+ ++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~~   53 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN------------EKPYPCGLCNRAFTRR--------DLLIRHAQKI   53 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS------------SCSEECTTTCCEESSH--------HHHHHHHTTT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC------------CCCccCCCCCCccCCH--------HHHHHHHHHH
Confidence            589999999999999999999999999            8999999988877744        8899996 56

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=2.7e-10  Score=82.97  Aligned_cols=28  Identities=29%  Similarity=0.591  Sum_probs=26.8

Q ss_pred             CCcccccCCCCcccCCCCchhhHhh-hcc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMR-SHM   29 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR-~H~   29 (457)
                      ++++|.|.+|+|.|.....|..||+ +|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   37 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHT   37 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            6899999999999999999999997 999

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.94  E-value=3.1e-10  Score=79.50  Aligned_cols=44  Identities=18%  Similarity=0.307  Sum_probs=41.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR------------EKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCC------------SSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            56789999999999999999999999999999999            899999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=80.11  Aligned_cols=44  Identities=18%  Similarity=0.357  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS------------SSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=80.38  Aligned_cols=44  Identities=14%  Similarity=0.282  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG------------QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS------------CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            56889999999999999999999999999999999            899999886

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=80.40  Aligned_cols=44  Identities=18%  Similarity=0.292  Sum_probs=41.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC------------SSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.7e-10  Score=79.70  Aligned_cols=44  Identities=18%  Similarity=0.387  Sum_probs=41.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG------------QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC------------CSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            56889999999999999999999999999999999            899999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.2e-10  Score=78.90  Aligned_cols=44  Identities=20%  Similarity=0.319  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhcc-ccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|++ +|++            ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~------------~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG------------EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT------------SCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCC------------CCCCCCCCC
Confidence            6788999999999999999999999999999 9999            899999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=79.08  Aligned_cols=44  Identities=20%  Similarity=0.326  Sum_probs=41.3

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT------------SCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999863

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.4e-10  Score=80.01  Aligned_cols=44  Identities=18%  Similarity=0.369  Sum_probs=41.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS------------CCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC------------CCCCCCCCC
Confidence            56889999999999999999999999999999999            899999886

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.9e-10  Score=79.63  Aligned_cols=44  Identities=16%  Similarity=0.256  Sum_probs=41.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG------------EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC------------CCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC------------CCCCCCCCC
Confidence            56789999999999999999999999999999999            899999886

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.9e-10  Score=89.82  Aligned_cols=55  Identities=24%  Similarity=0.302  Sum_probs=45.3

Q ss_pred             CCCcccccCCCCcccCCCCchhhHhhhccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCccc
Q 038961            1 DREFKHVCKFCSKSFPCGRSLGGHMRSHMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSS   80 (457)
Q Consensus         1 ~~ek~~~Ck~C~K~F~~~~~L~~HmR~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~~~   80 (457)
                      .++++|.|.+|+|.|.....|..||++|+...                             .++|               
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~-----------------------------~~~~---------------   38 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETV-----------------------------AALR---------------   38 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHT-----------------------------TTCC---------------
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccC-----------------------------CCcc---------------
Confidence            37899999999999999999999999999210                             1455               


Q ss_pred             ccccccccCCccCCcccccc
Q 038961           81 QQQQQLCGKGFVSWKPMKCN  100 (457)
Q Consensus        81 ~~~C~~CgK~F~s~~~mr~H  100 (457)
                       |.|.+||+.|.....|+.|
T Consensus        39 -~~C~~C~k~f~~~~~L~~H   57 (78)
T 2d9h_A           39 -FPCEFCGKRFEKPDSVAAH   57 (78)
T ss_dssp             -EECTTTCCEESSHHHHHHH
T ss_pred             -cCCCCCCchhCCHHHHHHH
Confidence             7899999999998884333

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5e-10  Score=78.42  Aligned_cols=44  Identities=20%  Similarity=0.339  Sum_probs=41.2

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC------------CCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            67889999999999999999999999999999999            899999863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.6e-10  Score=77.10  Aligned_cols=43  Identities=19%  Similarity=0.355  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC------------CCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.87  E-value=2e-10  Score=86.39  Aligned_cols=57  Identities=9%  Similarity=0.144  Sum_probs=45.9

Q ss_pred             hhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCC
Q 038961          299 LGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLK  378 (457)
Q Consensus       299 L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk  378 (457)
                      |..|+++|++            ++||.|+.|++.|...        ..|.   ++           |++++||.|++|++
T Consensus         2 L~~h~~~H~~------------~k~~~C~~C~k~F~~~--------~~l~---~~-----------H~~~k~~~C~~C~k   47 (62)
T 1vd4_A            2 IETDERDSTN------------RASFKCPVCSSTFTDL--------EANQ---LF-----------DPMTGTFRCTFCHT   47 (62)
T ss_dssp             CCCCSSSCCS------------SSEEECSSSCCEEEHH--------HHHH---HE-----------ETTTTEEBCSSSCC
T ss_pred             hhhHHHHcCC------------CCCccCCCCCchhccH--------HHhH---hh-----------cCCCCCEECCCCCC
Confidence            6788999998            8899999988777643        4454   56           99999999999999


Q ss_pred             CCCCchhhhhh
Q 038961          379 VFPSGQALGGH  389 (457)
Q Consensus       379 ~F~~~~~L~~H  389 (457)
                      .|....++..+
T Consensus        48 ~f~~~~~~~~~   58 (62)
T 1vd4_A           48 EVEEDESAMPK   58 (62)
T ss_dssp             BCEECTTCSCC
T ss_pred             ccccCcccccc
Confidence            99888776544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.87  E-value=7.8e-10  Score=75.67  Aligned_cols=42  Identities=24%  Similarity=0.420  Sum_probs=39.1

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAG------------ESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC------------CCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC------------CCCCCCC
Confidence            46789999999999999999999999999999999            8899884

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.2e-10  Score=77.19  Aligned_cols=43  Identities=21%  Similarity=0.390  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT------------SSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.7e-10  Score=77.01  Aligned_cols=43  Identities=19%  Similarity=0.330  Sum_probs=40.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG------------ERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS------------CCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC------------CCCCCCCC
Confidence            56889999999999999999999999999999999            89999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9e-10  Score=77.00  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG------------ERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC------------CCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.4e-10  Score=88.64  Aligned_cols=66  Identities=15%  Similarity=0.065  Sum_probs=55.3

Q ss_pred             CchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          295 SYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       295 s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      +...|..|+++|.+            ++||.|.+|++.|...        ..|.                -  +++|.|+
T Consensus         2 ~~~~l~~H~~~h~~------------~~~~~C~~C~k~f~~~--------~~l~----------------~--~~~~~C~   43 (73)
T 2ctu_A            2 SSGSSGKRQKIHLG------------DRSQKCSKCGIIFIRR--------STLS----------------R--RKTPMCE   43 (73)
T ss_dssp             CCCSCCCCCCCCCC------------CSEEECSSSCCEEECC--------CCCC----------------C--SSSCCCH
T ss_pred             cchhHHHHHHHhCC------------CCCeeCCcccchhCCH--------HHhC----------------c--CCCCCCC
Confidence            35679999999999            9999999988777633        4443                1  7899999


Q ss_pred             CCCCCCCCchhhhhhhhhccCCCC
Q 038961          375 ICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       375 ~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      +|++.|.+...|..|+++|+++..
T Consensus        44 ~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A           44 KCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             HHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             CCChhhcCHHHHHHHHHhhcCCCC
Confidence            999999999999999999988643

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.3e-10  Score=76.81  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS------------CCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC------------CCCcCCCC
Confidence            67889999999999999999999999999999999            89999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.8e-10  Score=77.05  Aligned_cols=43  Identities=21%  Similarity=0.419  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC------------SCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.86  E-value=3.8e-10  Score=90.30  Aligned_cols=56  Identities=14%  Similarity=0.249  Sum_probs=51.2

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ++||.|.+|++.|...        ..|..|+++           |++++||.|++|++.|.+...|..|+++|.+
T Consensus         1 ek~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRS--------DHLTTHIRT-----------HTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCH--------HHHHHHHHH-----------HHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCH--------HHHHHHHHH-----------cCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            5799999988877754        889999999           9999999999999999999999999999874

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.8e-10  Score=77.04  Aligned_cols=43  Identities=19%  Similarity=0.335  Sum_probs=40.4

Q ss_pred             hhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       275 ~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      +++|++++||.|.+|++.|.....|..|+++|++            ++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSS------------SCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCC------------CCCCCCCCC
Confidence            4679999999999999999999999999999999            899999886

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.5e-10  Score=77.21  Aligned_cols=43  Identities=21%  Similarity=0.332  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC------------CCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.1e-09  Score=76.55  Aligned_cols=43  Identities=21%  Similarity=0.368  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT------------CCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.86  E-value=6.1e-10  Score=85.62  Aligned_cols=58  Identities=16%  Similarity=0.280  Sum_probs=52.4

Q ss_pred             hhcCCCCccccC--CCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          276 KDSQKRSKFECA--TCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       276 ~~h~~ekpy~C~--~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      ..|.++++|.|.  .|++.|.+...|..|+++|.+            +++|.|.+|++.|...        ..|..|+++
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~------------~~~~~C~~C~~~f~~~--------~~l~~H~~~   71 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG------------QKPFQCRICMRNFSRS--------DHLTTHIRT   71 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC------------CCCEECTTTCCEESCH--------HHHHHHHTT
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC------------CCCeECCCCCchhCCH--------HHHHHHHHh
Confidence            358899999997  599999999999999999999            9999999988877754        889999988

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.3e-10  Score=76.91  Aligned_cols=43  Identities=21%  Similarity=0.383  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG------------EKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS------------CCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.85  E-value=7e-10  Score=77.65  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=40.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT------------SCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1e-09  Score=76.55  Aligned_cols=43  Identities=23%  Similarity=0.353  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG------------ENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS------------SCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=7.1e-10  Score=77.62  Aligned_cols=43  Identities=26%  Similarity=0.412  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG------------EKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS------------SSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=76.59  Aligned_cols=43  Identities=19%  Similarity=0.308  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS------------SCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=74.75  Aligned_cols=41  Identities=20%  Similarity=0.276  Sum_probs=38.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG------------SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC------------CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCC------------CCCCCC
Confidence            56789999999999999999999999999999999            888887

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.5e-10  Score=75.14  Aligned_cols=42  Identities=19%  Similarity=0.339  Sum_probs=39.0

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV------------KSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC------------CSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC------------CCCCCCC
Confidence            46789999999999999999999999999999999            8899884

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.3e-09  Score=79.25  Aligned_cols=46  Identities=20%  Similarity=0.329  Sum_probs=43.3

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhcc-ccCCccCccccccCCCCCCccCCCCCCCCc
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSENSIEAEHSPDPTA  334 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~cekp~~C~~C~k~f~  334 (457)
                      .|++++||.|.+|++.|.....|..|++ +|++            ++||.|.+|++.|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~------------~k~~~C~~C~k~F~   52 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS------------ERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC------------CCCCCSSSSCCSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC------------CCCccCCCCCCCCC
Confidence            4889999999999999999999999997 9999            99999999998886

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=76.65  Aligned_cols=43  Identities=19%  Similarity=0.359  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC------------SCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.5e-10  Score=76.77  Aligned_cols=43  Identities=23%  Similarity=0.391  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS------------SSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=76.41  Aligned_cols=43  Identities=19%  Similarity=0.335  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS------------CCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.1e-10  Score=76.11  Aligned_cols=42  Identities=19%  Similarity=0.425  Sum_probs=39.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG------------QSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS------------SCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8899884

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.83  E-value=1.6e-09  Score=75.68  Aligned_cols=45  Identities=11%  Similarity=-0.073  Sum_probs=41.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|+.|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMG------------EKTWKCRECDMCFSQA--------SSLRLHQNV-----------HVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC------------CCCCCCSSSCCCCSSH--------HHHHHHGGG-----------GSSSSCSCSSCC
T ss_pred             CCcCccCC------------CcCeECCCCCcccCCH--------HHHHHHHHH-----------cCCCCCcCCCCC
Confidence            68999999            9999999999888755        889999999           999999999998

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.6e-10  Score=76.99  Aligned_cols=43  Identities=21%  Similarity=0.403  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC------------CSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.2e-10  Score=76.94  Aligned_cols=43  Identities=21%  Similarity=0.397  Sum_probs=40.7

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~------------~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC------------CCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=75.54  Aligned_cols=42  Identities=21%  Similarity=0.277  Sum_probs=39.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG------------ESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC------------SSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8899884

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=76.54  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=39.9

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG------------ERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS------------CCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.3e-09  Score=74.58  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=38.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG------------SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC------------CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC------------CCCCCC
Confidence            56789999999999999999999999999999999            888887

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=76.68  Aligned_cols=43  Identities=21%  Similarity=0.360  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS------------SCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC------------CCCCCCCC
Confidence            56889999999999999999999999999999999            89999975

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.6e-09  Score=75.74  Aligned_cols=45  Identities=9%  Similarity=-0.007  Sum_probs=41.3

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTG------------KKPYKCNECGKVFTQN--------SHLARHRGI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSC------------CSSCBCTTTCCBCSSH--------HHHHHHGGG-----------TSCCCCCSCCCC
T ss_pred             CCCcCCCC------------CcCeECCCCCCeeCCH--------HHHHHHhhh-----------cCCCCCCCCCCC
Confidence            68999999            9999999998888754        889999999           999999999998

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-09  Score=75.89  Aligned_cols=43  Identities=21%  Similarity=0.371  Sum_probs=40.0

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC------------SCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            56789999999999999999999999999999999            89999873

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.9e-10  Score=76.91  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=40.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS------------CCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999975

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.82  E-value=9.1e-10  Score=84.52  Aligned_cols=38  Identities=24%  Similarity=0.469  Sum_probs=27.4

Q ss_pred             chhhhhhccccCCCCccccccCCCccccCCC--CCCCCCCchhhhhhhhhc
Q 038961          345 ENSADHFFVADCDDHRAETSCGAKKKHECPI--CLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       345 ~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H  393 (457)
                      ..|..|+++           |++++||.|++  |++.|.+...|..|+++|
T Consensus        33 ~~L~~H~~~-----------H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           33 SHLKAHTRT-----------HTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             HHHHHHHHH-----------HSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             HHHHHHHHh-----------cCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            555555555           66677777754  888888888888888776

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=3.8e-10  Score=85.07  Aligned_cols=53  Identities=21%  Similarity=0.296  Sum_probs=45.1

Q ss_pred             CCcccccCCCCcccCCCCchhhHhhh-ccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCccc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMRS-HMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSS   80 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~~~   80 (457)
                      ++++|.|.+|+++|.....|..||++ |..                               +++|               
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~-------------------------------~~~~---------------   40 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR-------------------------------NVKV---------------   40 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS-------------------------------SCCC---------------
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCC-------------------------------CCcC---------------
Confidence            57899999999999999999999998 731                               4566               


Q ss_pred             ccccccccCCccCCccccccc
Q 038961           81 QQQQQLCGKGFVSWKPMKCNS  101 (457)
Q Consensus        81 ~~~C~~CgK~F~s~~~mr~Hs  101 (457)
                       |.|.+||+.|.+...|+.|.
T Consensus        41 -~~C~~C~k~f~~~~~L~~H~   60 (66)
T 2drp_A           41 -YPCPFCFKEFTRKDNMTAHV   60 (66)
T ss_dssp             -EECTTTCCEESCHHHHHHHH
T ss_pred             -eECCCCCCccCCHHHHHHHH
Confidence             78999999999988865553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=76.82  Aligned_cols=43  Identities=19%  Similarity=0.403  Sum_probs=40.4

Q ss_pred             hhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       275 ~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      +++|++++||.|.+|++.|.+...|..|+++|++            ++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR------------EKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH------------CCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC------------CCCCCCCCC
Confidence            4679999999999999999999999999999999            899999886

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.6e-09  Score=75.01  Aligned_cols=42  Identities=19%  Similarity=0.424  Sum_probs=39.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA------------KSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC------------CCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC------------CCCcCCC
Confidence            67889999999999999999999999999999999            8899885

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.9e-09  Score=75.31  Aligned_cols=45  Identities=11%  Similarity=0.023  Sum_probs=41.4

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTG------------EKPFDCIDCGKAFSDH--------IGLNQHRRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCC------------CCSBCCTTTCCCBSSH--------HHHHHHHTT-----------TTTCCCCSSCCC
T ss_pred             CCCCCcCC------------CCCeECCCCCceeCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999998888755        889999999           999999999998

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.2e-09  Score=75.34  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=39.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG------------ESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT------------SSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8899884

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=75.29  Aligned_cols=45  Identities=9%  Similarity=-0.051  Sum_probs=41.3

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTG------------EKPHECRECGKSFSFN--------SQLIVHQRI-----------HTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC------------CCSCBCTTTCCBCSSH--------HHHHHHHTT-----------TTTSCCSCCCCC
T ss_pred             CCccccCC------------CCCeeCCCCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999998888754        889999999           999999999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=1.1e-09  Score=77.50  Aligned_cols=28  Identities=29%  Similarity=0.402  Sum_probs=27.0

Q ss_pred             CCcccccCCCCcccCCCCchhhHhhhcc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      ++++|.|.+|+|.|.....|..||++|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHS   36 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcC
Confidence            5789999999999999999999999999

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=74.80  Aligned_cols=45  Identities=11%  Similarity=0.051  Sum_probs=41.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTG------------EKPYKCNECGKAFSQT--------SKLARHQRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSS------------CCTTCCTTTCCCCSSH--------HHHHHHHTT-----------TTTCSCCCSCCC
T ss_pred             CCCcCCCC------------CcCcCCCCCCCccCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            68999999            9999999999888755        889999999           999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=75.24  Aligned_cols=45  Identities=13%  Similarity=0.062  Sum_probs=41.4

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTG------------EKPFKCDICGKSFCGR--------SRLNRHSMV-----------HTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSS------------SCSCCCSSSCCCCSSH--------HHHHHHHHH-----------TTCCCSSSCCCC
T ss_pred             CCCCCCCC------------CCCcCCCcCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999999888755        889999999           999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=75.40  Aligned_cols=45  Identities=9%  Similarity=-0.032  Sum_probs=41.3

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTG------------EKLYNCKECGKSFSRA--------PCLLKHERL-----------HSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSC------------CCCCCBTTTTBCCSCH--------HHHHHHHHH-----------CCSSSCCCCCCC
T ss_pred             CCcccCCC------------CCCeECCCCCCccCch--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            68999999            9999999988888754        899999999           999999999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=2.3e-09  Score=75.82  Aligned_cols=43  Identities=28%  Similarity=0.526  Sum_probs=40.3

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPD  331 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k  331 (457)
                      .|.++++|.|.+|++.|.....|..|+++|++            ++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSG------------EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCS------------CCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCC------------CCCccCCCCCC
Confidence            47889999999999999999999999999999            99999999864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.6e-09  Score=74.89  Aligned_cols=42  Identities=17%  Similarity=0.424  Sum_probs=39.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR------------KSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC------------CCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8899884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1e-09  Score=75.04  Aligned_cols=41  Identities=20%  Similarity=0.299  Sum_probs=38.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG------------SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS------------CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC------------CCCCCC
Confidence            56789999999999999999999999999999999            888887

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.2e-09  Score=76.39  Aligned_cols=43  Identities=19%  Similarity=0.286  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ------------ETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS------------CCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.2e-09  Score=76.35  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=39.9

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.+...|..|+++|++            ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG------------ERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC------------CCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8999986

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.6e-09  Score=75.71  Aligned_cols=45  Identities=11%  Similarity=0.047  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTG------------EKPYKCHECGKVFRRN--------SHLARHQLI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTC------------CCCEECTTTCCEESSH--------HHHHHHHTT-----------TCCCCCSCCSCC
T ss_pred             CCCcCCCC------------CCCeECCCCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.79  E-value=1.5e-09  Score=74.08  Aligned_cols=41  Identities=20%  Similarity=0.322  Sum_probs=38.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~------------~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ------------SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC------------CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC------------CCCCCC
Confidence            46789999999999999999999999999999999            889887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.78  E-value=1.7e-09  Score=75.40  Aligned_cols=45  Identities=7%  Similarity=-0.133  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTG------------VKPYGCSQCAKTFSLK--------SQLIVHQRS-----------HTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC------------CCSEECSSSSCEESSH--------HHHHHHGGG-----------SSSCCCSCCTTC
T ss_pred             ccccCCCC------------CCceECCCCCchhCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.78  E-value=2.2e-09  Score=75.06  Aligned_cols=45  Identities=9%  Similarity=-0.032  Sum_probs=41.2

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTG------------EKPFKCVECGKGFSRR--------SALNVHHKL-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC------------CCSBCCSSSCCCBSST--------THHHHHHHH-----------HSCCSSCSCCCC
T ss_pred             CCCCCCCC------------CCCcccCccCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            58999999            9999999998888754        899999999           999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.7e-09  Score=75.68  Aligned_cols=46  Identities=11%  Similarity=0.005  Sum_probs=41.4

Q ss_pred             hhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          300 GGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       300 ~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      +.|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         1 ~~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2em5_A            1 GSSGSSGSS------------TKSHQCHECGRGFTLK--------SHLNQHQRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCC------------SCSEECSSSCCEESSH--------HHHHHHHTT-----------TSCSCCSSCCCC
T ss_pred             CCCcCCCCC------------CCCeECCcCCCccCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            369999999            9999999988877754        899999999           999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=75.69  Aligned_cols=45  Identities=11%  Similarity=-0.011  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTG------------EKPYECSICGKSFTKK--------SQLHVHQQI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSC------------CCSEECSSSCCEESSH--------HHHHHHHHT-----------TSSCCSCCSCCC
T ss_pred             CCCCCCCC------------CcCcCCCCCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=75.44  Aligned_cols=45  Identities=9%  Similarity=-0.019  Sum_probs=40.9

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTG------------GKHFECTECGKAFTRK--------STLSMHQKI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSS------------SCCEECSSSCCEESCH--------HHHHHHGGG-----------TSCSSCSCCCCC
T ss_pred             ccccccCC------------CCCeECCCCCchhCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999988877744        899999999           999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=75.24  Aligned_cols=43  Identities=21%  Similarity=0.370  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG------------KKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC------------CCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999873

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.7e-09  Score=74.57  Aligned_cols=45  Identities=9%  Similarity=-0.033  Sum_probs=41.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAG------------EKPYGCSECGKAFSSK--------SYLIIHMRT-----------HSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSC------------CCSCBCSSSCCBCSCH--------HHHHHHHTT-----------TCCSCSSCCCCC
T ss_pred             CCCcCcCC------------CCCcCCCccChhhCCh--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999998888754        899999999           999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.78  E-value=1.9e-09  Score=75.33  Aligned_cols=45  Identities=13%  Similarity=0.059  Sum_probs=41.3

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      +|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTG------------EKPYECKECGKAFSQT--------THLIQHQRV-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS------------SCSCBCSSSCCBCSCH--------HHHHHHHHH-----------HSSCCCSSCCCC
T ss_pred             CCCCccCC------------CCceECCCCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999998888754        899999999           999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.9e-09  Score=81.62  Aligned_cols=54  Identities=17%  Similarity=0.270  Sum_probs=48.8

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC-CCCCCCcchhhhhccCcchhhhhhcc
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE-HSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~-~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      ..+++||.|.+|++.|. ...|..|+++ ++            ++||.|+ .|++.|...        +.|..|+++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~------------~~p~~C~~~C~k~f~~~--------~~L~~H~~~   59 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP------------RLPVACPNQCGVGTVAR--------EDLPGHLKD   59 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS------------SSEEECTTCCSCCEEET--------TTHHHHHHT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC------------CcCccCCcccCcccccH--------HHHHHHHHh
Confidence            56789999999999999 9999999999 88            9999999 988877644        889999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.77  E-value=1.6e-09  Score=75.71  Aligned_cols=45  Identities=9%  Similarity=0.015  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTG------------EKRYKCNECGKVFSRN--------SQLSQHQKI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTT------------SCCEECSSSCCEESSH--------HHHHHHHTG-----------GGCCCCCSSSCC
T ss_pred             CCccCCCC------------CcCcCCCCCcchhCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=75.14  Aligned_cols=46  Identities=13%  Similarity=0.017  Sum_probs=41.5

Q ss_pred             hhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          300 GGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       300 ~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      +.|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         1 ~~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2eme_A            1 GSSGSSGSG------------EKPYVCDYCGKAFGLS--------AELVRHQRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCC------------CCSEECSSSCCEESSH--------HHHHHHHGG-----------GCCCSCCSSCCC
T ss_pred             CCCCCCCCC------------CCCeECCCCChhhCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            368999999            9999999988887754        889999999           999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=2.1e-09  Score=74.79  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=40.2

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSP  330 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~  330 (457)
                      ..|++++||.|.+|++.|.....|..|+++|++            +++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~------------~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG------------SVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSC------------CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccC------------CCCCCCcCCC
Confidence            358999999999999999999999999999999            9999999874

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-09  Score=75.59  Aligned_cols=45  Identities=11%  Similarity=-0.037  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTG------------EKPYICAECGKAFTIR--------SNLIKHQKI-----------HTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSS------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------TSCCCCSSCSCC
T ss_pred             CcccCCCC------------CcCeECCCCChhhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=75.13  Aligned_cols=45  Identities=13%  Similarity=0.038  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTG------------EKPYECSVCGKAFSHR--------QSLSVHQRI-----------HSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS------------CCSEECSSSCCEESSH--------HHHHHHHGG-----------GSSCCCSCSSCC
T ss_pred             CccCCcCC------------CCCeeCCCcCCccCCH--------HHHHHHHHH-----------hcCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=74.64  Aligned_cols=45  Identities=16%  Similarity=-0.028  Sum_probs=41.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|..|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~h~~~h~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSV------------EKPYKCEDCGKGYNRR--------LNLDMHQRV-----------HMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCC------------CSSCBCSSSCCBCSSH--------HHHHHHGGG-----------GGSCCCCCSCCC
T ss_pred             CCCCCCCC------------CCCeeCcccCchhCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            58999999            9999999998888754        889999999           999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=76.01  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=40.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR------------EKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH------------TTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC------------CCCCCCCC
Confidence            67889999999999999999999999999999999            89999874

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.1e-09  Score=75.08  Aligned_cols=45  Identities=11%  Similarity=0.016  Sum_probs=40.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTG------------EKPFKCGECGKSYNQR--------VHLTQHQRV-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS------------CCSEECTTTCCEESSS--------HHHHTTGGG-----------GSSCCSSCSCCC
T ss_pred             CCCCCCCC------------CCCeECCCCCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988777644        899999999           999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=75.34  Aligned_cols=45  Identities=11%  Similarity=0.027  Sum_probs=40.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTG------------EKPYKCNECGKVFTQN--------SHLANHQRI-----------HTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCC------------CCSSEETTTTEECSSH--------HHHHHHHGG-----------GSCCCSCSSCCC
T ss_pred             CCCCCCCC------------CCCeECCCcChhhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            58999999            9999999988777644        899999999           999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.4e-09  Score=82.37  Aligned_cols=55  Identities=13%  Similarity=0.161  Sum_probs=49.2

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC-CCCCCCCCchhhhhhhhhccCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP-ICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~-~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ++||.|.+|++.|. .        ..|..|+++            ++++||.|+ +|++.|.....|..|+++|...
T Consensus         8 ~~~~~C~~C~k~f~-~--------~~L~~H~~~------------~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-F--------DTIQSHQYQ------------CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCEEECSSSCCEEE-H--------HHHHHHHHH------------CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCeeccccCCccC-H--------HHHHHHHHH------------cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            79999999887776 5        889999875            689999999 9999999999999999999763

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2e-09  Score=75.04  Aligned_cols=45  Identities=13%  Similarity=-0.096  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSG------------EKSHTCDECGKNFCYI--------SALRIHQRV-----------HMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCC------------CSSEECTTTCCEESSH--------HHHHHHHTT-----------TCCSCSSCCSCC
T ss_pred             CccccCCC------------CCCeECCCcCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            68999999            9999999988887754        889999999           999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.77  E-value=2.2e-09  Score=74.90  Aligned_cols=45  Identities=11%  Similarity=-0.036  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTG------------EKPYNCKECGKSFRWA--------SCLLKHQRV-----------HSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCC------------CCSEECSSSCCEESSH--------HHHHHHGGG-----------GTSCCCCSTTCC
T ss_pred             CCCCCCCC------------CcCeECCccccccCCh--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            68999999            9999999988877744        889999999           999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.4e-09  Score=74.17  Aligned_cols=45  Identities=9%  Similarity=-0.005  Sum_probs=41.2

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhc-cccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFF-VADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~-~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|++ +           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~~-----------H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTG------------KKPYECIECGKAFIQN--------TSLIRHWRYY-----------HTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCC------------CCSBCCSSSCCCBSSH--------HHHHHHHTTT-----------TTTSCSSSCCCC
T ss_pred             ccccccCC------------CCCEECCccCchhCCh--------HHHHHHhHhh-----------cCCCCCCCCCCC
Confidence            58999999            9999999998888755        88999999 8           999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.2e-09  Score=74.33  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=39.2

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG------------ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT------------SCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC------------CCCCCCC
Confidence            56789999999999999999999999999999999            8899884

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.6e-09  Score=75.72  Aligned_cols=45  Identities=9%  Similarity=0.081  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSG------------EKPYKCNECGKVFTQN--------SHLTNHWRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSS------------SCSEECSSSCCEESSH--------HHHHHHHHH-----------HSSSSCSSCCCC
T ss_pred             CCcccCCC------------CCCEeCCcCCCccCCH--------HHHHHHHHH-----------HCCCCCCCCCCC
Confidence            68999999            9999999988877744        899999999           999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.1e-09  Score=75.08  Aligned_cols=45  Identities=9%  Similarity=-0.011  Sum_probs=40.9

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTG------------EKPYKCNECGKVFRHN--------SYLSRHQRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCC------------SSSEECSSSCCEESSH--------HHHHHHHTT-----------TCCCCCCSCCCC
T ss_pred             CcccCCCC------------CCCeECCCCCchhCCh--------HHHHHHHhh-----------cCCCCCCCCCCC
Confidence            58999999            9999999988877754        889999999           999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.4e-09  Score=74.78  Aligned_cols=45  Identities=13%  Similarity=0.036  Sum_probs=40.9

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTG------------EKPYKCEECGKGFICR--------RDLYTHHMV-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSC------------CCSEECSSSCCEESCH--------HHHHHHGGG-----------GTTCCCSSTTCC
T ss_pred             CCCCCCCC------------CcCccCCCccchhCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999988877754        899999999           999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.7e-09  Score=74.45  Aligned_cols=45  Identities=7%  Similarity=-0.083  Sum_probs=41.2

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      +|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTG------------EKPYKCSDCGKSFTWK--------SRLRIHQKC-----------HTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSS------------CCSCBCSSSCCBCSSH--------HHHHHHHHH-----------HSCCSSCCSCCC
T ss_pred             CCCCCCCC------------CCCccCCccChhhCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            68999999            9999999998888754        889999999           999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.8e-09  Score=75.37  Aligned_cols=45  Identities=11%  Similarity=0.014  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTG------------ERPHKCNECGKSFIQS--------AHLIQHQRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSC------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------HSCCCTTSSSCC
T ss_pred             CCcCCcCC------------CCCeeCCCCChhhCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.9e-09  Score=74.60  Aligned_cols=42  Identities=17%  Similarity=0.358  Sum_probs=39.4

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~------------~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR------------KSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC------------CCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8899883

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3e-09  Score=74.46  Aligned_cols=42  Identities=19%  Similarity=0.323  Sum_probs=39.3

Q ss_pred             hhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       275 ~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      +++|++++||.|.+|++.|.....|..|+++|++            ++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG------------EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS------------CCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC------------CCCCCCCC
Confidence            4679999999999999999999999999999999            89999974

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.9e-09  Score=75.24  Aligned_cols=45  Identities=13%  Similarity=0.017  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTG------------ENPYECHECGKAFSRK--------YQLISHQRT-----------HAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCS------------SCCEECSSSCCEESSH--------HHHHHHHHH-----------HTTSCCSCSSCC
T ss_pred             CCCCCCCC------------CcCcCCCCCCcccCcH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877744        899999999           999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2e-09  Score=75.22  Aligned_cols=45  Identities=7%  Similarity=-0.020  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSG------------EKPYKCSECGKAFHRH--------THLNEHRRI-----------HTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------HTCCCSSCSSCC
T ss_pred             CCccccCC------------CcCeECCCCCCeeCCh--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.6e-09  Score=74.55  Aligned_cols=45  Identities=13%  Similarity=0.039  Sum_probs=40.7

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      +|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTG------------EKPYRCAECGKAFTDR--------SNLFTHQKI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSC------------CCSEECSSSCCEESSH--------HHHHHHHTT-----------TTTSCCCCTTCC
T ss_pred             CCCCCCCC------------CCCeECCCCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999986

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.7e-09  Score=75.52  Aligned_cols=42  Identities=19%  Similarity=0.272  Sum_probs=39.8

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE  327 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~  327 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER------------TDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH------------SCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC------------CCCCCCC
Confidence            67889999999999999999999999999999999            8899986

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.73  E-value=3.1e-09  Score=74.31  Aligned_cols=45  Identities=9%  Similarity=-0.069  Sum_probs=40.9

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            +++|.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~h~~~h~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAG------------VNPYKCSQCEKSFSGK--------LRLLVHQRM-----------HTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCC------------CCSEECSSSSCEESSH--------HHHHHHHGG-----------GCCSSCCSCCCC
T ss_pred             CCCCCCCC------------CCCeECCCCCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            58999999            9999999988877744        889999999           999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.4e-09  Score=74.64  Aligned_cols=45  Identities=9%  Similarity=-0.105  Sum_probs=40.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTG------------EKPCKCTECGKAFCWK--------SQLIMHQRT-----------HVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCC------------CCSEECSSSCCEESSS--------HHHHHHHHH-----------CCSCCCSCCCCC
T ss_pred             cCcccCCC------------CCCeeCCCCCCccCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            68999999            9999999988777644        899999999           999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.7e-09  Score=75.56  Aligned_cols=45  Identities=13%  Similarity=0.008  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTG------------ERPYICTVCGKAFTDR--------SNLIKHQKI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSC------------CCSEECTTTCCEESSH--------HHHHHHHHH-----------HHCSSCSSSCCC
T ss_pred             CCCCCCCC------------CCCcCCCCCCchhCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           999999999998

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.7e-09  Score=73.21  Aligned_cols=41  Identities=20%  Similarity=0.260  Sum_probs=38.5

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++            ++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG------------VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS------------CSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC------------CCCCCC
Confidence            67889999999999999999999999999999999            888876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.7e-09  Score=75.67  Aligned_cols=45  Identities=9%  Similarity=-0.039  Sum_probs=41.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        +.|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSG------------ERPYGCNECGKNFGRH--------SHLIEHLKR-----------HFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSC------------CCCEECSSSCCEESSH--------HHHHHHHHH-----------HHSTTSSCCSCC
T ss_pred             CCCCCCCC------------CCCEEccccCcccCCH--------HHHHHHHHH-----------HcCCCCCCCCCC
Confidence            68999999            9999999988887754        899999999           999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.4e-09  Score=74.04  Aligned_cols=44  Identities=7%  Similarity=-0.059  Sum_probs=40.0

Q ss_pred             hccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          302 HRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       302 H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      |+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         1 H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSG------------EKPFGCSCCEKAFSSK--------SYLLVHQQT-----------HAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSS------------CCCEECSSSSCEESSH--------HHHHHHHHH-----------HTSSCSCSCCCC
T ss_pred             CCCCcCC------------CcCccCCCCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            7899999            9999999988877754        899999999           999999999998

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.3e-09  Score=73.74  Aligned_cols=42  Identities=26%  Similarity=0.391  Sum_probs=38.9

Q ss_pred             hhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       275 ~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      .++|++++||.|.+|++.|.....|..|+++|++            ++||.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~------------~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG------------EKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS------------CCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCC------------CCCCCCCC
Confidence            3679999999999999999999999999999999            89999863

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.6e-09  Score=74.55  Aligned_cols=45  Identities=13%  Similarity=0.050  Sum_probs=40.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSG------------EKPFKCEECGKRFTQN--------SQLHSHQRV-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCC------------CCSEEETTTTEEESSH--------HHHHHHGGG-----------GSCCCCSCCCCC
T ss_pred             CcccCCCC------------CCCeeCCCCCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999988777644        899999999           999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.9e-09  Score=75.26  Aligned_cols=45  Identities=7%  Similarity=-0.053  Sum_probs=41.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTG------------VKPYMCNECGKAFSVY--------SSLTTHQVI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSC------------CCSEECSSSCCEESCH--------HHHHHHHHH-----------HHCCSCCSCCCC
T ss_pred             CcccccCC------------CcCeECCCCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            58999999            9999999988877754        899999999           999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=74.55  Aligned_cols=45  Identities=9%  Similarity=0.050  Sum_probs=41.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~h~~~h~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTG------------EKPYKCMECGKAFGDN--------SSCTQHQRL-----------HTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSS------------CCSSSBTTTTBCCSSH--------HHHHHHHHH-----------HHSCCCCCCCCC
T ss_pred             CCCcCCCC------------CCCcCCCCCCchhCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            58999999            9999999988888754        899999999           999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.2e-09  Score=74.14  Aligned_cols=45  Identities=11%  Similarity=0.002  Sum_probs=40.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~h~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSG------------EKPFKCEECGKGFYTN--------SQCYSHQRS-----------HSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCC------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------SCCSSCCSSCCC
T ss_pred             CCCCCCCC------------CCCcCCCCCCCcCCCh--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999988877754        899999999           999999999998

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.9e-09  Score=73.67  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=40.2

Q ss_pred             hhhcCCCCccccC--CCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCC
Q 038961          275 YKDSQKRSKFECA--TCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHS  329 (457)
Q Consensus       275 ~~~h~~ekpy~C~--~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C  329 (457)
                      .++|++++||.|.  .|++.|.....|..|+++|++            ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG------------VKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC------------CCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC------------CCCCCCCCC
Confidence            4679999999998  899999999999999999999            899999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.7e-09  Score=74.54  Aligned_cols=45  Identities=13%  Similarity=-0.014  Sum_probs=40.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~h~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTG------------EKPYKCEKCGKGYNSK--------FNLDMHQKV-----------HTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS------------CCSEEETTTTEEESCH--------HHHHHHHTT-----------SCSCCSSCCSCC
T ss_pred             CCCcCCCC------------CCCeECCCCCCccCCH--------HHHHHHHHh-----------hCCCCCCCCCCC
Confidence            58999999            9999999987777644        899999999           999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2e-09  Score=75.21  Aligned_cols=45  Identities=13%  Similarity=0.011  Sum_probs=40.7

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTG------------EKPYKCNECGKVFTQN--------SHLARHRRV-----------HTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC------------CSSEECSSSCCEESSS--------HHHHHHTHH-----------HHSCCCSCSCCC
T ss_pred             CcCcCCCC------------CCCeECCcCCchhCCH--------HHHHHHHHh-----------cCCCCCCCCCCC
Confidence            68999999            9999999988777644        899999999           999999999998

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=3.1e-09  Score=85.72  Aligned_cols=66  Identities=14%  Similarity=0.185  Sum_probs=51.2

Q ss_pred             cccccCCCCcccCCCCchhhHhhh-ccCCCCCCCcccchhhhhccCCCCCCCCCCCCCCcCCCCccccccccCCCccccc
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRS-HMITVTETTDGHHKQLAKKKLPSVNNTETNGYGLRENPKKSKRIADSSENNSSQQ   82 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lre~P~kt~r~~~~~~~~~~~~   82 (457)
                      ..|.|.+|++.|.....|..||++ |+.                                +.|...+.        -..|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~--------------------------------~~~~~~~~--------c~~~   63 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVG--------------------------------GPEQNNHV--------CYWE   63 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTC--------------------------------CTTCSCCC--------CCCT
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccC--------------------------------CCCCCccc--------eecc
Confidence            347899999999999999999998 883                                22211100        0016


Q ss_pred             ccccccCCccCCcc----cccccccccccCC
Q 038961           83 QQQLCGKGFVSWKP----MKCNSEKDRVSNN  109 (457)
Q Consensus        83 ~C~~CgK~F~s~~~----mr~Hs~~~~~~~~  109 (457)
                      .|.+|||.|.+...    |++|+++++|.|.
T Consensus        64 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           64 ECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             TCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            79999999999877    8889999999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=5.5e-09  Score=72.06  Aligned_cols=41  Identities=20%  Similarity=0.306  Sum_probs=38.3

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      ++|++++||.|.+|++.|.....|..|+++|++            ++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS------------DKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC------------TTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC------------CCCccCCC
Confidence            469999999999999999999999999999999            89999874

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.1e-09  Score=75.10  Aligned_cols=45  Identities=9%  Similarity=-0.035  Sum_probs=40.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~h~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSG------------EKPYGCNECGKTFSQK--------SILSAHQRT-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCS------------SCCEEETTTTEEESSH--------HHHHHHHHH-----------HSSCCCSSSCCC
T ss_pred             CCCCccCC------------CcCeECCCCCcccCch--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            68999999            9999999987777644        899999999           999999999998

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.70  E-value=2.9e-09  Score=91.07  Aligned_cols=57  Identities=19%  Similarity=0.243  Sum_probs=51.0

Q ss_pred             hhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          275 YKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       275 ~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      ...|++++||.|.+|++.|.....|..|+++| .             +||.|++|++.|...        ..|..|+++
T Consensus        66 h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~-------------~~~~C~~C~k~f~~~--------~~l~~H~~~  122 (129)
T 2wbt_A           66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT-E-------------HTKVCPVCKKEFTST--------DSALDHVCK  122 (129)
T ss_dssp             HHHHHHHCSEECTTTCCEESSHHHHHHHHHHT-C-------------CCCBCTTTCCBCSSH--------HHHHHHHHH
T ss_pred             HHHhCCCCCeECCCCCcccCCHhHHHHHHHHC-C-------------CCCCCCCCCcccCCH--------HHHHHHHHH
Confidence            34689999999999999999999999999999 4             579999988888755        889999999

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.70  E-value=5.1e-09  Score=76.03  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=41.7

Q ss_pred             ccccCCCCChhhhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          263 KRSTTDASDAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       263 ~~~~~~~~~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +.+.+...+..|+++|++++||.|.+|++.|.....|..|+++|++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            4456666777899999999999999999999999999999999999

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.4e-09  Score=73.97  Aligned_cols=45  Identities=11%  Similarity=0.019  Sum_probs=40.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||+|++|
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSR------------EKSHQCRECGEIFFQY--------VSLIEHQVL-----------HMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSC------------CCCEECTTTCCEESSH--------HHHHHHHHH-----------HSCCSCCCTTCC
T ss_pred             CcccccCC------------CCCEEccccChhhCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999988877754        889999999           999999999998

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=7.1e-09  Score=70.47  Aligned_cols=39  Identities=23%  Similarity=0.407  Sum_probs=36.8

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      ++|++++||.|.+|++.|.....|..|+++|++            ++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG------------SGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCC------------CSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC------------CCCcCC
Confidence            469999999999999999999999999999999            889887

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.69  E-value=2.6e-09  Score=80.16  Aligned_cols=49  Identities=16%  Similarity=0.327  Sum_probs=43.8

Q ss_pred             hhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcch
Q 038961          273 EFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADS  336 (457)
Q Consensus       273 ~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~  336 (457)
                      .|+++|++++||.|.+|++.|.....|.   ++|++            ++||.|.+|++.|...
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~------------~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM------------TGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT------------TTEEBCSSSCCBCEEC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC------------CCCEECCCCCCccccC
Confidence            4778999999999999999999988886   88999            9999999999888643

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=4.9e-09  Score=73.23  Aligned_cols=45  Identities=11%  Similarity=0.070  Sum_probs=40.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSG------------EKPFKCKECGKAFRQN--------IHLASHLRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------HCCCCSSCSSCC
T ss_pred             CCCCCCCC------------CCCEECCcCCchhCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            58999999            9999999988877754        889999999           999999999986

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=4.8e-09  Score=72.94  Aligned_cols=28  Identities=29%  Similarity=0.422  Sum_probs=27.2

Q ss_pred             CCcccccCCCCcccCCCCchhhHhhhcc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      ++++|.|.+|+|+|.....|..|||+|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   34 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHD   34 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHcc
Confidence            6899999999999999999999999999

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.8e-09  Score=73.84  Aligned_cols=45  Identities=11%  Similarity=-0.086  Sum_probs=40.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 ~h~~~h~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSG------------EKPYKCVECGKGYKRR--------LDLDFHQRV-----------HTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCS------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------HHCCCCCCSCCC
T ss_pred             CCCCCCCC------------CCCeECcccCchhCCH--------HHHHHHHHH-----------HcCCCCCCCCCC
Confidence            58999999            9999999988877744        889999999           999999999998

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=4.3e-09  Score=82.51  Aligned_cols=69  Identities=13%  Similarity=0.079  Sum_probs=57.2

Q ss_pred             chhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          296 YQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       296 ~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      +..|..|+++|.+            ++|+.|.+|++.|. .        ..|..|+ .           |.+++||.|+.
T Consensus         2 ~~~L~~H~~~~c~------------~r~~~C~~C~~~~~-~--------~~L~~H~-~-----------~c~~~~~~C~~   48 (75)
T 2d9k_A            2 SSGSSGHEETECP------------LRLAVCQHCDLELS-I--------LKLKEHE-D-----------YCGARTELCGN   48 (75)
T ss_dssp             CCCCSCCCCCCCC------------CCCEECSSSCCEEC-H--------HHHHHHH-H-----------HHHHCEEECSS
T ss_pred             chHHHhhCcccCC------------CcccCCcccChHhh-H--------HHHHHHH-h-----------HcCCCceEccc
Confidence            3568888888888            88999998776663 2        7888898 7           88999999999


Q ss_pred             CCCCCCCchhhhhhhhhccCCCC
Q 038961          376 CLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       376 Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      |++.|.. ..|..|+++|.+...
T Consensus        49 C~~~~~~-~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           49 CGRNVLV-KDLKTHPEVCGREGS   70 (75)
T ss_dssp             SCCEEET-TGGGTHHHHBTTBSS
T ss_pred             CCCcCcH-HHHHHHHHHccCCcC
Confidence            9999874 899999999998643

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.65  E-value=4.5e-09  Score=76.33  Aligned_cols=42  Identities=17%  Similarity=0.303  Sum_probs=39.7

Q ss_pred             chhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          345 ENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       345 ~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      ..|..|+++           |++++||.|++|++.|.+...|..|+++|+++.
T Consensus        10 ~~l~~h~~~-----------H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A           10 PGTEKPRSR-----------SQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCCCCHHH-----------HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             cchhhHHHh-----------cCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            789999999           999999999999999999999999999999853

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1e-08  Score=71.57  Aligned_cols=35  Identities=29%  Similarity=0.489  Sum_probs=33.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTR   37 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCC
Confidence            67889999999999999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.4e-08  Score=70.65  Aligned_cols=44  Identities=9%  Similarity=-0.010  Sum_probs=40.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTG------------EKPYECSDCGKSFIKK--------SQLHVHQRI-----------HTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSS------------CCSSCCSSSCCCCSSH--------HHHHHHHGG-----------GSSSCCCSSSC
T ss_pred             ccccCCCC------------CCCcCCCCCCchhCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            68999999            9999999999888755        899999999           99999999985

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.64  E-value=1.4e-08  Score=67.19  Aligned_cols=31  Identities=29%  Similarity=0.623  Sum_probs=30.2

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |++++||+|++|++.|.+...|..|+++|++
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            9999999999999999999999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.5e-08  Score=70.57  Aligned_cols=44  Identities=11%  Similarity=0.040  Sum_probs=40.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTG------------GKPYQCNECGKAFSQT--------SKLARHQRV-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSS------------SCSSSCCSSCCCCSSH--------HHHHHHGGG-----------GCCCCCCCCCC
T ss_pred             CcccccCC------------CCCeECCCCCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCC
Confidence            68999999            9999999999888755        889999999           99999999975

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.64  E-value=9.5e-09  Score=78.71  Aligned_cols=57  Identities=21%  Similarity=0.336  Sum_probs=50.5

Q ss_pred             hcCCCCccccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC--CCCCCcchhhhhccCcchhhhhhc
Q 038961          277 DSQKRSKFECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH--SPDPTADSKLIKSINNENSADHFF  352 (457)
Q Consensus       277 ~h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~--C~k~f~~~k~f~~~~~~~L~~H~~  352 (457)
                      .+...++|.|.+  |++.|.....|..|+++|++            ++||.|.+  |++.|...        ..|..|++
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~------------~~~~~C~~~~C~k~f~~~--------~~l~~H~~   70 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG------------EKPFSCSWKGCERRFARS--------DELSRHRR   70 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS------------SCSEECCCTTCCCEESSH--------HHHHHHTT
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCC------------CCCccCCCCCCCcccCCH--------HHHHhHhh
Confidence            366789999999  99999999999999999999            99999975  88877744        88999988


Q ss_pred             c
Q 038961          353 V  353 (457)
Q Consensus       353 ~  353 (457)
                      +
T Consensus        71 ~   71 (72)
T 2epa_A           71 T   71 (72)
T ss_dssp             T
T ss_pred             c
Confidence            7

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.4e-08  Score=70.76  Aligned_cols=44  Identities=11%  Similarity=0.026  Sum_probs=39.9

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTG------------EKPYKCNECGKVFTQN--------SHLARHRGI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSC------------CCTTCCSSSCCCCSSH--------HHHHHHHTT-----------TSCSCCSSTTC
T ss_pred             CCCcCCCC------------CcCeECCCCCcccCCh--------hHHHHHhHh-----------cCCCCCCCCCC
Confidence            58999999            9999999999888755        889999999           99999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.5e-08  Score=70.76  Aligned_cols=44  Identities=14%  Similarity=0.074  Sum_probs=39.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|..|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSG------------EKPFQCEECGKRFTQN--------SHLHSHQRV-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCC------------SSSBCCSSSCCCBSSH--------HHHHHHGGG-----------GTTCCCSSCCC
T ss_pred             CcccCCCC------------CcCCCCCCCCcccCCH--------HHHHHHHHh-----------cCCCCCCCCCC
Confidence            68999999            9999999998888755        889999999           99999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.4e-08  Score=70.82  Aligned_cols=44  Identities=9%  Similarity=0.009  Sum_probs=39.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|..|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTG------------EKPYKCNECGKVFTQN--------SHLVRHRGI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC------------CCSCBCSSSCCBCSSH--------HHHHHHHTT-----------TTTSSCCCCSC
T ss_pred             CCCcCCCC------------CcCeECCCCCcccCCH--------HHHHHHHHh-----------hCCCCCCCCCC
Confidence            68999999            9999999998888754        899999999           99999999975

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=3.1e-09  Score=86.08  Aligned_cols=56  Identities=16%  Similarity=0.211  Sum_probs=48.6

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      +.++|++++||.|.+|++.|.....|..|+++|++            ++||.|..|.+            +..|..|.++
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~------------ekp~~C~~~~~------------~~~~~~~~~~   71 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE------------EFQKRAKRQER------------RKQLLSKQKY   71 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHH------------HHHHHCCCCSC------------CCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC------------CCCcccchhhh------------HHHHHhhhcc
Confidence            34679999999999999999999999999999999            89999987542            1667888887

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.7e-08  Score=70.31  Aligned_cols=44  Identities=11%  Similarity=0.068  Sum_probs=39.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTG------------EKPYKCNECGKAFRAH--------SNLTTHQVI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC------------SCCCCCTTTTCCCSSH--------HHHHHHHTT-----------TCCSCCSSCCC
T ss_pred             CcccccCC------------CCCeECCcCChhhCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            58999999            9999999998888755        889999999           99999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.7e-08  Score=70.32  Aligned_cols=44  Identities=11%  Similarity=-0.001  Sum_probs=39.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTG------------ENPFICSECGKVFTHK--------TNLIIHQKI-----------HTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCS------------CCSCBCTTTCCBCSSH--------HHHHHHHTT-----------TSCCCCSCSCC
T ss_pred             CCCCCCCC------------CCCEECCccCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            58999999            9999999998888754        889999999           99999999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.1e-08  Score=71.31  Aligned_cols=44  Identities=14%  Similarity=0.015  Sum_probs=39.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTG------------ERHYECSECGKAFARK--------STLIMHQRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC------------CCCEECSSSCCEESSH--------HHHHHHHTT-----------TSCCCCCSSCC
T ss_pred             CcccCcCC------------CCCeECCcCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            68999999            9999999988877744        899999999           99999999975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.8e-08  Score=70.35  Aligned_cols=44  Identities=14%  Similarity=0.036  Sum_probs=39.7

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMG------------EKCYKCDVCGKEFSQS--------SHLQTHQRV-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCC------------CCCCBCSSSCCBCSSH--------HHHHHHHTT-----------TSSSCCCCTTC
T ss_pred             CCccccCC------------CCCeECCCCCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCC
Confidence            58999999            9999999998888754        889999999           99999999975

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.1e-08  Score=70.08  Aligned_cols=44  Identities=11%  Similarity=0.045  Sum_probs=39.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~h~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTG------------EKPYKCQVCGKAFRVS--------SHLVQHHSV-----------HSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSS------------CCSCBCSSSCCBCSSH--------HHHHHHTTT-----------TTSCCSCTTSC
T ss_pred             CCCCCCCC------------CcccCCCCCCcccCcH--------HHHHHHHHh-----------cCCCCCCCCCC
Confidence            48899999            9999999998888754        889999999           99999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.4e-08  Score=70.65  Aligned_cols=44  Identities=9%  Similarity=-0.009  Sum_probs=39.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTG------------EKPYICNECGKSFIQK--------SHLNRHRRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCS------------CCSEECSSSCCEESSH--------HHHHHHGGG-----------TSSCCSSCCCC
T ss_pred             CCCCCCCC------------CcCEECCCCChhhCCh--------HHHHHHHHh-----------cCCCCCcCCCC
Confidence            58999999            9999999988887754        899999999           99999999975

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.1e-08  Score=71.32  Aligned_cols=45  Identities=16%  Similarity=0.104  Sum_probs=40.0

Q ss_pred             hhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          300 GGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       300 ~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      ..|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         1 ~~H~~~H~~------------~~~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~~~~~C~~   45 (46)
T 2em3_A            1 GSSGSSGTG------------EKPYECKVCSKAFTQK--------AHLAQHQKT-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSS------------CCSEECSSSCCEESSH--------HHHHHHHHH-----------HCCCCCCCSCC
T ss_pred             CCCCCCCCC------------CcCeECCCCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            368999999            9999999988877754        899999999           99999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=70.81  Aligned_cols=44  Identities=14%  Similarity=0.031  Sum_probs=39.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTG------------EKPFECSECQKAFNTK--------SNLIVHQRT-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC------------CCSEECSSSCCEESSH--------HHHHHHHHT-----------SCSSSSSCCCC
T ss_pred             CCCCCCCC------------CCCcCCCCCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           99999999975

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=70.66  Aligned_cols=45  Identities=9%  Similarity=-0.029  Sum_probs=40.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .++++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         2 s~~~~h~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ep0_A            2 SSGSSGTG------------EKPYKCDVCHKSFRYG--------SSLTVHQRI-----------HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSTT------------CCSEECSSSCCEESSH--------HHHHHHHTT-----------TSSSCCCSCCCC
T ss_pred             CCCCCCCC------------CCCeeCcccCcccCCh--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            36788999            9999999988877744        899999999           999999999998

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.7e-08  Score=70.42  Aligned_cols=44  Identities=9%  Similarity=0.014  Sum_probs=39.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~h~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAG------------KKLFKCNECKKTFTQS--------SSLTVHQRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCS------------SCCCBCTTTCCBCSSH--------HHHHHHHHH-----------HTSSCCCSCCC
T ss_pred             CCCCCCCC------------CCCEECCccCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCC
Confidence            68999999            9999999998888755        889999999           99999999975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.57  E-value=1.1e-08  Score=71.31  Aligned_cols=44  Identities=16%  Similarity=0.063  Sum_probs=39.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTG------------EKPFECAECGKSFSIS--------SQLATHQRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC------------CCSEECSSSSCEESSH--------HHHHHHHHH-----------HTTSCSSSSCC
T ss_pred             CCCCCCCC------------CCCEECCCCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            58999999            9999999988777744        899999999           99999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.7e-08  Score=68.44  Aligned_cols=43  Identities=5%  Similarity=-0.119  Sum_probs=39.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|+
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTG------------MKPYVCNECGKAFRSK--------SYLIIHTRT-----------HTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSS------------SSSSCCTTTCCCCSSH--------HHHHHHHTT-----------TCCSSSSCCC
T ss_pred             CCCcCCCC------------CcCeECCCCCCccCCH--------HHHHHHhhh-----------cCCCCCCCCC
Confidence            58999999            9999999999888755        889999999           9999999995

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.8e-08  Score=67.63  Aligned_cols=42  Identities=12%  Similarity=0.086  Sum_probs=38.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHEC  373 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C  373 (457)
                      +|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|
T Consensus         1 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGG------------EKPYRCDQCGKAFSQK--------GSLIVHIRV-----------HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCS------------CCSBCCTTTTCCBSSH--------HHHHTTGGG-----------TSCCSCCCC
T ss_pred             CCccccCC------------CCCeeCCCccchhCCH--------HHHHHHHHH-----------hCCCCCCCC
Confidence            48999999            9999999998888754        889999999           999999998

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.2e-08  Score=71.28  Aligned_cols=44  Identities=9%  Similarity=-0.070  Sum_probs=39.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||+|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTG------------QRPYECIECGKAFKTK--------SSLICHRRS-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCC------------SSSEECSSSCCEESSH--------HHHHHHHHH-----------HSSSSCCCCCC
T ss_pred             CCccccCC------------CcCcCCCCCCCccCCH--------HHHHHHHHh-----------cCCCCCCCCCC
Confidence            58999999            9999999988877754        889999999           99999999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.6e-08  Score=70.36  Aligned_cols=44  Identities=14%  Similarity=0.064  Sum_probs=39.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTG------------EKPYRCGECGKAFAQK--------ANLTQHQRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC------------CCCEECSSSCCEESSH--------HHHHHHHTT-----------TSSCCSSCSCC
T ss_pred             CCccCCCC------------CCCeECCCCCCccCCH--------HHHHHHHHH-----------cCCCCCCCCCC
Confidence            58999999            9999999988887754        899999999           99999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.4e-08  Score=70.75  Aligned_cols=44  Identities=11%  Similarity=0.001  Sum_probs=39.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTG------------EKPYKCNECGKAFRAR--------SSLAIHQAT-----------HSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCC------------CCCEECTTSCCEESSH--------HHHHHHHHH-----------HCCCSCSCTTC
T ss_pred             CccCCCCC------------CCCeeccccCChhcCH--------HHHHHHHHH-----------cCCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           99999999975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=3.1e-08  Score=67.42  Aligned_cols=33  Identities=21%  Similarity=0.458  Sum_probs=31.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|++|++.|.+...|..|+++|+++.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKS   37 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCS
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999854

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.9e-08  Score=70.09  Aligned_cols=44  Identities=11%  Similarity=0.015  Sum_probs=39.4

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTG------------ERHYECSECGKAFIQK--------STLSMHQRI-----------HRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSS------------CCCEECSSSCCEESSH--------HHHHHHHGG-----------GCSCCCCSCCC
T ss_pred             CCCcccCC------------CCCCCCCCCCcccCCH--------HHHHHHHhH-----------hCCCCCCCCCC
Confidence            58999999            9999999988877744        899999999           99999999975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.6e-08  Score=69.47  Aligned_cols=44  Identities=9%  Similarity=0.016  Sum_probs=39.6

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|+.
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSG------------KKPYECKECRKTFIQI--------GHLNQHKRV-----------HTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCC------------SCSCCCSSSCCCCSSH--------HHHHHHHHH-----------CSSCCSCSTTC
T ss_pred             CCCCCcCC------------CCCcCCCCcCchhCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            58999999            9999999999888755        899999999           99999999973

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.55  E-value=2.2e-08  Score=68.24  Aligned_cols=42  Identities=10%  Similarity=0.049  Sum_probs=37.7

Q ss_pred             hccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          302 HRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       302 H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      |+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|+
T Consensus         1 H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSG------------ENPYECSECGKAFNRK--------DQLISHQRT-----------HAGESGPSSG   42 (42)
T ss_dssp             CCSSSSS------------CCSEECSSSCCEESSH--------HHHHHHHGG-----------GCCCCSCCCC
T ss_pred             CCCCCCC------------CCCccCCCcChhhCCH--------HHHHHHHHh-----------cCCCCCCCCC
Confidence            7889999            9999999988877744        889999999           9999999995

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.1e-08  Score=69.93  Aligned_cols=44  Identities=14%  Similarity=0.052  Sum_probs=39.2

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCC-CccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGA-KKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~g-eKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++ ++||.|++
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQK------------EKCFKCNKCEKTFSCS--------KYLTQHERI-----------HTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCC------------SCCEECSSSCCEESSS--------HHHHHHHTT-----------CCSCCTTSSSCC
T ss_pred             CCccccCC------------CCCEECcCCCCcCCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            58999999            9999999988777644        899999999           999 99999975

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=3.6e-08  Score=67.25  Aligned_cols=42  Identities=12%  Similarity=0.063  Sum_probs=38.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHEC  373 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C  373 (457)
                      +|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||+|
T Consensus         1 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C   42 (42)
T 2eos_A            1 GSSGSSGG------------EKPYPCEICGTRFRHL--------QTLKSHLRI-----------HTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSS------------SCCBCCSSSCCCBSSH--------HHHHHHTTT-----------TSCCSSTTC
T ss_pred             CCCcccCC------------CCCEECCCCCCccCCH--------HHHHHHHHh-----------cCCCCCCCC
Confidence            48899999            9999999998888755        889999999           999999998

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.1e-08  Score=68.43  Aligned_cols=34  Identities=29%  Similarity=0.285  Sum_probs=31.9

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      |++++||.|++|++.|.+...|..|+++|+++..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            9999999999999999999999999999998643

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=1.3e-08  Score=70.77  Aligned_cols=44  Identities=11%  Similarity=0.061  Sum_probs=39.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~H~~~H~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTG------------EKPYNCEECGKAFIHD--------SQLQEHQRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSC------------CCSEECTTTCCEESSH--------HHHHHHHHH-----------HHSCCCSSSTT
T ss_pred             CCCcCcCC------------CcCccCCCCCCCcCCH--------HHHHHHHHh-----------cCCCCCCCCCC
Confidence            58999999            9999999988877744        889999999           99999999985

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2e-08  Score=70.11  Aligned_cols=44  Identities=11%  Similarity=0.072  Sum_probs=39.8

Q ss_pred             hccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          302 HRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       302 H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++|
T Consensus         3 ~~~~h~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEG------------EKPYQCSECGKSFSGS--------YRLTQHWIT-----------HTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSC------------CCTTCCSSSCCCCSSH--------HHHHHHHTH-----------HHHCCCCSCCCC
T ss_pred             CCCCCCC------------CCCeeCCCCCcccCCH--------HHHHHHHHH-----------cCCCCCCCCCCC
Confidence            4678999            9999999999888755        889999999           999999999998

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=2.9e-08  Score=68.47  Aligned_cols=44  Identities=14%  Similarity=0.067  Sum_probs=39.0

Q ss_pred             hhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          300 GGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       300 ~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      +.|+++|++            ++||.|..|++.|...        ..|..|+++           |++++||.|+
T Consensus         1 ~~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~   44 (44)
T 2emb_A            1 GSSGSSGHT------------RKRYECSKCQATFNLR--------KHLIQHQKT-----------HAAKSGPSSG   44 (44)
T ss_dssp             CCCCSCCCC------------CSSEECTTTCCEESCH--------HHHHHHGGG-----------GCCCCCTTCC
T ss_pred             CCcccccCC------------CCCeECCCCCCccCCH--------HHHHHHHHH-----------cCCCCCcCCC
Confidence            368999999            9999999988877754        889999999           9999999995

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=4.7e-08  Score=68.10  Aligned_cols=44  Identities=14%  Similarity=0.077  Sum_probs=39.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|+.
T Consensus         2 ~h~~~h~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTG------------EKPYECDVCRKAFSHH--------ASLTQHQRV-----------HSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC------------SSSCBCTTTCCBCSSS--------HHHHHHGGG-----------SCCSCCCCCCC
T ss_pred             CCCCCcCC------------CCCcCCCCcCchhCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            48899999            9999999988888744        899999999           99999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.5e-08  Score=68.61  Aligned_cols=43  Identities=12%  Similarity=0.020  Sum_probs=38.7

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|+
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTG------------EKPYECNECQKAFNTK--------SNLMVHQRT-----------HTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSC------------CCSEECTTTCCEESCH--------HHHHHHHHH-----------TTTSSCSCCC
T ss_pred             CCccCCCC------------CCCeECCCCCcccCCH--------hHHHHHHHH-----------hCCCCCCCCC
Confidence            68999999            9999999988877754        899999999           9999999995

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=5e-08  Score=67.19  Aligned_cols=33  Identities=24%  Similarity=0.453  Sum_probs=31.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|++|++.|.+...|..|+++|+++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKS   39 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCC
Confidence            999999999999999999999999999999754

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=4e-08  Score=68.45  Aligned_cols=34  Identities=26%  Similarity=0.337  Sum_probs=32.0

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      |++++||.|++|++.|.+...|..|+++|+++..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH   40 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC
Confidence            9999999999999999999999999999998644

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.1e-08  Score=69.92  Aligned_cols=44  Identities=11%  Similarity=0.074  Sum_probs=39.8

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 ~h~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSG------------ERPFKCNECGKGFGRR--------SHLAGHLRL-----------HSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSC------------CCSCCCSSSCCCCSSH--------HHHHHHHHH-----------HHHTTCCCSCC
T ss_pred             CCCcCCCC------------CCCeECCCCCcccCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            68999999            9999999999888755        889999999           99999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.7e-08  Score=68.47  Aligned_cols=43  Identities=12%  Similarity=0.036  Sum_probs=38.5

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|+
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTG------------ENPYECCECGKVFSRK--------DQLVSHQKT-----------HSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSS------------CCSCEETTTTEECSSH--------HHHHHHHTT-----------SSSSCSCCCC
T ss_pred             CCccccCC------------CcCeeCCCCCCccCCH--------HHHHHHHHH-----------cCCCCCCCCC
Confidence            58999999            9999999988777744        899999999           9999999995

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=1.9e-08  Score=70.22  Aligned_cols=44  Identities=11%  Similarity=-0.011  Sum_probs=39.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      +|+++|++            ++||.|.+|++.|...        ..|..|+++           |++++||.|+.
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTG------------EKPYSCNVCGKAFVLS--------AHLNQHLRV-----------HTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSS------------CCSEEETTTTEEESSH--------HHHHHHHHH-----------HSSCCSSSCCC
T ss_pred             CccccCCC------------CCCeECcccChhhCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            68999999            9999999988777644        899999999           99999999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.2e-08  Score=68.77  Aligned_cols=44  Identities=14%  Similarity=0.061  Sum_probs=39.1

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            ++||.|++|++.|...        ..|..|+++           |++++||.|+.
T Consensus         2 ~H~~~H~~------------~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTG------------EKPYECNQCGKAFSVR--------SSLTTHQAI-----------HTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC------------CCSSEETTTTEECSSH--------HHHHHHHTT-----------SCCCCCCCSCC
T ss_pred             CcccCCCC------------CCCeECCCCChhhCCH--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            58999999            9999999988777644        899999999           99999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.5e-08  Score=67.24  Aligned_cols=33  Identities=27%  Similarity=0.378  Sum_probs=31.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|++|++.|.+...|..|+++|+++.
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG   38 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCC
Confidence            999999999999999999999999999999853

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=4.5e-08  Score=67.52  Aligned_cols=43  Identities=9%  Similarity=0.014  Sum_probs=38.9

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECP  374 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~  374 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|+
T Consensus         2 ~h~~~h~~------------~~~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAA------------KTTSECQECGKIFRHS--------SLLIEHQAL-----------HAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSS------------SCCCCCTTTCCCCSSH--------HHHHHHHHH-----------HTTSCCCCCC
T ss_pred             CCCCCCCC------------CcCeECCCCCcccCCH--------HHHHHHHHH-----------HCCCCCCCCC
Confidence            68999999            9999999999888754        889999999           9999999995

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.47  E-value=5.3e-08  Score=66.22  Aligned_cols=33  Identities=30%  Similarity=0.447  Sum_probs=31.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|++|++.|.+...|..|+++|+++.
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   38 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG   38 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCC
Confidence            999999999999999999999999999999853

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.47  E-value=5.2e-08  Score=65.39  Aligned_cols=37  Identities=30%  Similarity=0.600  Sum_probs=33.7

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEA  326 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C  326 (457)
                      |++++||.|.+|++.|.+...|..|+++|++            ++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~------------~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR------------DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC------------SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC------------Ccccee
Confidence            5788999999999999999999999999999            888865

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.8e-08  Score=66.40  Aligned_cols=32  Identities=22%  Similarity=0.286  Sum_probs=30.1

Q ss_pred             cCCCccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ++++|||+|++  |++.|.+.+.|..|+++|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            78999999986  999999999999999999974

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.46  E-value=6.4e-08  Score=62.86  Aligned_cols=32  Identities=28%  Similarity=0.390  Sum_probs=30.6

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            88999999999999999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=5.6e-08  Score=68.09  Aligned_cols=45  Identities=11%  Similarity=-0.056  Sum_probs=39.7

Q ss_pred             hhccccCCccCccccccCCCCCCccCC--CCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAE--HSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPIC  376 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~--~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~C  376 (457)
                      .|.++|++            ++||.|.  .|++.|...        ..|..|+++           |++++||+|.+|
T Consensus         2 ~~~~~H~~------------~k~~~C~~~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTG------------EKPFACTWPGCGWRFSRS--------DELSRHRRS-----------HSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCC------------CCCEECCSSSCCCEESSH--------HHHHHHHTT-----------SCCCCSCSSCCC
T ss_pred             CCCCCcCC------------CCCeECCCCCCCCccCCH--------HHHHHHHHH-----------hCCCCCCCCCCC
Confidence            47789999            9999998  888777644        889999999           999999999998

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.45  E-value=7.1e-08  Score=62.84  Aligned_cols=32  Identities=25%  Similarity=0.468  Sum_probs=30.6

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            88999999999999999999999999999874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=5.3e-08  Score=67.76  Aligned_cols=34  Identities=26%  Similarity=0.250  Sum_probs=31.8

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      |++++||.|++|++.|.+...|..|+++|+++..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP   40 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999999997543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.1e-08  Score=64.38  Aligned_cols=32  Identities=19%  Similarity=0.487  Sum_probs=30.8

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=6e-08  Score=66.80  Aligned_cols=33  Identities=24%  Similarity=0.285  Sum_probs=31.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|++|++.|.+...|..|+++|+++.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~   39 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKS   39 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999854

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.42  E-value=8e-08  Score=63.41  Aligned_cols=35  Identities=26%  Similarity=0.467  Sum_probs=33.2

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+++|++++||.|.+|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.2e-07  Score=62.10  Aligned_cols=32  Identities=34%  Similarity=0.477  Sum_probs=30.6

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            88999999999999999999999999999875

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=9.2e-08  Score=66.68  Aligned_cols=43  Identities=12%  Similarity=-0.013  Sum_probs=38.4

Q ss_pred             hccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          302 HRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       302 H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      ++++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         3 ~~~~h~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHG------------ERGHRCSDCGKFFLQA--------SNFIQHRRI-----------HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCC------------CSSCCCSSSCCCCSSH--------HHHHHHHHH-----------HSSCCCSSCCC
T ss_pred             CCCCCCC------------CCCcCCCCCCCeeCCh--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            5788999            9999999999888754        889999999           99999999975

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=6.2e-08  Score=63.95  Aligned_cols=33  Identities=15%  Similarity=0.441  Sum_probs=31.7

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      ++|++++||.|.+|++.|.....|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            569999999999999999999999999999998

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=4e-07  Score=69.64  Aligned_cols=33  Identities=24%  Similarity=0.381  Sum_probs=31.2

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |.++|||+|.+|+|.|.+...|..|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            888999999999999999999999999999853

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.38  E-value=1.5e-07  Score=63.10  Aligned_cols=34  Identities=32%  Similarity=0.535  Sum_probs=30.7

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      |++++||.|++|++.|.+...|..|+++|+++..
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            5789999999999999999999999999998644

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=9.3e-08  Score=63.50  Aligned_cols=32  Identities=16%  Similarity=0.091  Sum_probs=30.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhh-hhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGH-KRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H-~r~H~~~  396 (457)
                      |++++||+|++|++.|.+...|..| +++|++.
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            9999999999999999999999999 9999863

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.1e-07  Score=62.22  Aligned_cols=32  Identities=25%  Similarity=0.293  Sum_probs=30.6

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            89999999999999999999999999999874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.2e-07  Score=62.16  Aligned_cols=32  Identities=19%  Similarity=0.191  Sum_probs=30.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            88999999999999999999999999999874

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=8e-08  Score=66.58  Aligned_cols=44  Identities=14%  Similarity=0.089  Sum_probs=38.0

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      .|+++|++            +++|.|.+|++.|...        ..|..|+++           |++++||.|++
T Consensus         2 s~~~~h~~------------~k~~~C~~C~k~F~~~--------~~L~~H~~~-----------H~~~k~~~C~~   45 (45)
T 2epu_A            2 SSGSSGTG------------QKPFECTHCGKSFRAK--------GNLVTHQRI-----------HTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCCS------------CCSEEETTTTEEESSH--------HHHHHHHTT-----------TSSCCCCCSCC
T ss_pred             CCCCCCCC------------CcCccCCCCCCccCCh--------HHHHHHHHH-----------hCCCCCCCCCC
Confidence            36788999            9999999988777644        889999999           99999999974

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=8.2e-08  Score=65.23  Aligned_cols=30  Identities=23%  Similarity=0.374  Sum_probs=27.8

Q ss_pred             CCCcccccCC--CCcccCCCCchhhHhhhccC
Q 038961            1 DREFKHVCKF--CSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         1 ~~ek~~~Ck~--C~K~F~~~~~L~~HmR~H~~   30 (457)
                      .+++||.|.+  |+|+|.....|..|||+|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3789999987  99999999999999999994

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.4e-07  Score=61.85  Aligned_cols=32  Identities=22%  Similarity=0.327  Sum_probs=30.5

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||+|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            89999999999999999999999999999874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.35  E-value=1.2e-07  Score=67.18  Aligned_cols=34  Identities=29%  Similarity=0.386  Sum_probs=30.2

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhh-hccCCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKR-SHLLGGN  398 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~  398 (457)
                      |+++|||.|.+|++.|.+...|..|++ +|+++..
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            899999999999999999999999999 9998644

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.35  E-value=1.8e-07  Score=60.80  Aligned_cols=32  Identities=22%  Similarity=0.408  Sum_probs=30.6

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +|++++||.|.+|++.|.....|..|+++|++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            37899999999999999999999999999998

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.3e-07  Score=62.38  Aligned_cols=32  Identities=22%  Similarity=0.293  Sum_probs=30.5

Q ss_pred             cCCCccccCCCCCCCCCCc-hhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSG-QALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~-~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+. ..|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            8999999999999999999 9999999999874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.4e-07  Score=62.67  Aligned_cols=33  Identities=30%  Similarity=0.445  Sum_probs=31.3

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|++|++.|.+...|..|+++|+++.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   37 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSG   37 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCS
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999853

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.32  E-value=1.9e-07  Score=60.55  Aligned_cols=32  Identities=31%  Similarity=0.362  Sum_probs=30.5

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +|++++||.|.+|++.|.+...|..|+++|++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            37899999999999999999999999999998

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=2.3e-07  Score=71.40  Aligned_cols=40  Identities=23%  Similarity=0.262  Sum_probs=35.7

Q ss_pred             hcCCCCccccCC--CCCccCCchhhhhhc-cccCCccCccccccCCCCCCccCCC
Q 038961          277 DSQKRSKFECAT--CNKIFHSYQALGGHR-ASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       277 ~h~~ekpy~C~~--C~K~F~s~~~L~~H~-~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      ..++++||+|.+  |+|+|.+.++|..|+ ++|++            +|||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg------------EKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS------------DLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS------------CCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC------------CCCccccc
Confidence            378999999975  999999999999997 79999            88888864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.31  E-value=2.4e-07  Score=63.64  Aligned_cols=36  Identities=6%  Similarity=-0.017  Sum_probs=32.6

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCC
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPI  375 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~  375 (457)
                      ++||.|..|++.|...        ..|..|+++           |++++||.|++
T Consensus         8 ~k~~~C~~C~k~f~~~--------~~L~~H~~~-----------H~~~k~~~C~~   43 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEE--------ASLKRHTLQ-----------THSDKSGPSSG   43 (43)
T ss_dssp             SCCBCCSSSCCCBSSH--------HHHHHHHHH-----------HTCTTCSSSCC
T ss_pred             CCCEECCCCCCeeCCh--------HHHHHHHHh-----------hCCCCCccCCC
Confidence            8999999998888754        889999999           99999999975

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=1e-07  Score=74.53  Aligned_cols=60  Identities=10%  Similarity=0.027  Sum_probs=51.8

Q ss_pred             ChhhhhhcCCCCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhh
Q 038961          271 DAEFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADH  350 (457)
Q Consensus       271 ~~~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H  350 (457)
                      +..|++.|.+++||.|..|++.|. ...|..|+ .|.+            ++|+.|..|++.|.      .   ..|..|
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~------------~~~~~C~~C~~~~~------~---~~l~~H   61 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCG------------ARTELCGNCGRNVL------V---KDLKTH   61 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHH------------HCEEECSSSCCEEE------T---TGGGTH
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcC------------CCceEcccCCCcCc------H---HHHHHH
Confidence            445778899999999999999995 89999999 8999            89999999876543      1   789999


Q ss_pred             hcc
Q 038961          351 FFV  353 (457)
Q Consensus       351 ~~~  353 (457)
                      +++
T Consensus        62 ~~~   64 (75)
T 2d9k_A           62 PEV   64 (75)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=1e-07  Score=77.05  Aligned_cols=61  Identities=5%  Similarity=0.009  Sum_probs=50.4

Q ss_pred             hhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCC
Q 038961          301 GHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVF  380 (457)
Q Consensus       301 ~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F  380 (457)
                      .|.++|++            ++||.|.+|++.|...        ..|..|+++           |++++||+|..|.   
T Consensus        15 ~~~~~H~~------------~kpy~C~~C~k~F~~~--------~~L~~H~~~-----------Ht~ekp~~C~~~~---   60 (88)
T 1x6f_A           15 LGNGPRLQ------------NSTYQCKHCDSKLQST--------AELTSHLNI-----------HNEEFQKRAKRQE---   60 (88)
T ss_dssp             CCCCSCCC------------CSCEECSSSCCEESSH--------HHHHHHHHH-----------HHHHHHHHCCCCS---
T ss_pred             ccccccCC------------CCCCcCCCCCCEeCCH--------HHHHHHHHH-----------hCCCCCcccchhh---
Confidence            34567888            8999999988877754        889999999           9999999997654   


Q ss_pred             CCchhhhhhhhhccCC
Q 038961          381 PSGQALGGHKRSHLLG  396 (457)
Q Consensus       381 ~~~~~L~~H~r~H~~~  396 (457)
                       ....|..|+++|.+.
T Consensus        61 -~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           61 -RRKQLLSKQKYADGA   75 (88)
T ss_dssp             -CCCCCCCCCCCCCCS
T ss_pred             -hHHHHHhhhcccccc
Confidence             566788899998874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=1.4e-07  Score=57.77  Aligned_cols=27  Identities=22%  Similarity=0.400  Sum_probs=25.7

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhcc
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      +++|.|.+|+|+|.....|..|||+|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            589999999999999999999999996

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.27  E-value=2e-07  Score=60.38  Aligned_cols=27  Identities=30%  Similarity=0.603  Sum_probs=25.7

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|+|+|.....|..||++|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~   27 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL   27 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999994

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.27  E-value=1.2e-07  Score=58.26  Aligned_cols=27  Identities=30%  Similarity=0.538  Sum_probs=25.7

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhcc
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      +++|.|.+|+|+|.....|..|||+|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            589999999999999999999999995

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=2.6e-07  Score=60.55  Aligned_cols=32  Identities=31%  Similarity=0.425  Sum_probs=30.3

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|++|++.|.+...|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            78899999999999999999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.23  E-value=3.1e-07  Score=64.56  Aligned_cols=32  Identities=28%  Similarity=0.405  Sum_probs=30.2

Q ss_pred             cCCCccccCC--CCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECP--ICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|+  .|++.|.+...|..|+++|+++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            9999999996  7999999999999999999874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=4.4e-07  Score=59.41  Aligned_cols=33  Identities=15%  Similarity=0.358  Sum_probs=31.0

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +.|++++||.|.+|++.|.....|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            358899999999999999999999999999998

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.21  E-value=1.2e-07  Score=60.87  Aligned_cols=29  Identities=28%  Similarity=0.644  Sum_probs=26.6

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccCCC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMITV   32 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~~~   32 (457)
                      ++|.|.+|+|+|.....|..||++|+++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999999543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.21  E-value=4.7e-07  Score=58.51  Aligned_cols=27  Identities=33%  Similarity=0.563  Sum_probs=26.2

Q ss_pred             CccccCCCCCccCCchhhhhhccccCC
Q 038961          282 SKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +||.|.+|++.|.....|..|+++|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~   27 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL   27 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC
Confidence            589999999999999999999999999

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.20  E-value=3.8e-07  Score=60.42  Aligned_cols=32  Identities=41%  Similarity=0.548  Sum_probs=30.0

Q ss_pred             cCCCccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |++++||.|.+  |++.|.+.+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            88999999995  999999999999999999874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=3e-07  Score=56.54  Aligned_cols=27  Identities=26%  Similarity=0.482  Sum_probs=25.9

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhcc
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      +++|.|.+|+|+|.....|..|||+|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            589999999999999999999999997

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.19  E-value=5e-07  Score=69.58  Aligned_cols=33  Identities=18%  Similarity=0.198  Sum_probs=28.7

Q ss_pred             CCCcccccCC--CCcccCCCCchhhHh-hhccCCCC
Q 038961            1 DREFKHVCKF--CSKSFPCGRSLGGHM-RSHMITVT   33 (457)
Q Consensus         1 ~~ek~~~Ck~--C~K~F~~~~~L~~Hm-R~H~~~~~   33 (457)
                      ++||||+|.+  |+|+|.....|..|| |+|+++.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP   58 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   58 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence            4799999976  999999999999998 69994433

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=3.2e-07  Score=60.80  Aligned_cols=33  Identities=15%  Similarity=0.302  Sum_probs=31.3

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhh-ccccCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGH-RASHKK  308 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H-~~~H~~  308 (457)
                      ++|++++||.|.+|++.|.....|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            569999999999999999999999999 999987

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.2e-07  Score=56.24  Aligned_cols=26  Identities=35%  Similarity=0.588  Sum_probs=24.7

Q ss_pred             cccccCCCCcccCCCCchhhHhhhcc
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |+|.|.+|+|+|.....|..|||+|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999995

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=4.8e-07  Score=59.63  Aligned_cols=33  Identities=18%  Similarity=0.361  Sum_probs=31.1

Q ss_pred             hhcCCCCccccCCCCCccCCc-hhhhhhccccCC
Q 038961          276 KDSQKRSKFECATCNKIFHSY-QALGGHRASHKK  308 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~-~~L~~H~~~H~~  308 (457)
                      ++|++++||.|.+|++.|... ..|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            468999999999999999999 999999999988

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=6.7e-07  Score=58.53  Aligned_cols=32  Identities=22%  Similarity=0.423  Sum_probs=30.7

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      .|++++||.|.+|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            58899999999999999999999999999998

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=6.3e-07  Score=55.01  Aligned_cols=28  Identities=25%  Similarity=0.430  Sum_probs=26.1

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ++||.|++|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999975

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=6.7e-07  Score=58.34  Aligned_cols=32  Identities=16%  Similarity=0.300  Sum_probs=30.6

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +|++++||.|.+|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            48899999999999999999999999999998

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=5.5e-07  Score=55.78  Aligned_cols=28  Identities=25%  Similarity=0.422  Sum_probs=26.4

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +++|.|.+|++.|.....|..||++|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            5899999999999999999999999983

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=9.4e-07  Score=57.60  Aligned_cols=32  Identities=25%  Similarity=0.447  Sum_probs=30.5

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +|++++||.|.+|++.|.....|..|+++|++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            48899999999999999999999999999998

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=7.3e-07  Score=54.39  Aligned_cols=27  Identities=26%  Similarity=0.418  Sum_probs=25.4

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      ++||.|++|++.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999985

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.11  E-value=5.1e-07  Score=57.87  Aligned_cols=27  Identities=30%  Similarity=0.460  Sum_probs=26.1

Q ss_pred             CccccCCCCCccCCchhhhhhccccCC
Q 038961          282 SKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +||.|.+|++.|.....|..|+++|++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~   27 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFI   27 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHcc
Confidence            589999999999999999999999999

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=7.6e-07  Score=58.97  Aligned_cols=31  Identities=23%  Similarity=0.482  Sum_probs=29.3

Q ss_pred             cCCCCccccC--CCCCccCCchhhhhhccccCC
Q 038961          278 SQKRSKFECA--TCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       278 h~~ekpy~C~--~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |++++||.|.  .|++.|.+...|..|+++|++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            5789999999  599999999999999999999

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=9.7e-07  Score=58.47  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=30.1

Q ss_pred             cCCCccccCC--CCCCCCCCchhhhhhhhhccCCC
Q 038961          365 CGAKKKHECP--ICLKVFPSGQALGGHKRSHLLGG  397 (457)
Q Consensus       365 H~geKp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~  397 (457)
                      |++++||.|.  .|++.|.+...|..|+++|+++.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            6789999999  59999999999999999999753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.10  E-value=8.6e-07  Score=54.68  Aligned_cols=27  Identities=30%  Similarity=0.450  Sum_probs=25.6

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|+++|.....|..||++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            689999999999999999999999983

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=1.2e-06  Score=55.62  Aligned_cols=28  Identities=29%  Similarity=0.401  Sum_probs=26.4

Q ss_pred             CcccccC--CCCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCK--FCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck--~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +++|.|.  .|+|.|.....|..||++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            5899999  899999999999999999984

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.2e-07  Score=56.52  Aligned_cols=28  Identities=29%  Similarity=0.420  Sum_probs=26.3

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +++|.|.+|+|.|.....|..||++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            5799999999999999999999999983

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=1.2e-06  Score=53.65  Aligned_cols=28  Identities=36%  Similarity=0.656  Sum_probs=26.4

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            6899999999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=1.1e-06  Score=54.41  Aligned_cols=29  Identities=21%  Similarity=0.312  Sum_probs=27.0

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ++||.|++|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47999999999999999999999999874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=6.4e-07  Score=54.90  Aligned_cols=27  Identities=30%  Similarity=0.565  Sum_probs=25.3

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      ++||.|++|++.|.+...|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999985

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.08  E-value=1.2e-06  Score=54.06  Aligned_cols=28  Identities=32%  Similarity=0.357  Sum_probs=26.3

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            6899999999999999999999999874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.07  E-value=1.2e-06  Score=53.73  Aligned_cols=27  Identities=30%  Similarity=0.610  Sum_probs=25.5

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|++.|.....|..||++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            689999999999999999999999983

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.06  E-value=1.5e-06  Score=53.41  Aligned_cols=28  Identities=29%  Similarity=0.578  Sum_probs=26.2

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +||.|++|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.3e-06  Score=57.13  Aligned_cols=32  Identities=28%  Similarity=0.554  Sum_probs=30.3

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      .|++++||.|.+|++.|.....|..|+++|++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            37889999999999999999999999999998

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.06  E-value=1.2e-06  Score=61.94  Aligned_cols=33  Identities=24%  Similarity=0.472  Sum_probs=30.2

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhcc-ccCCc
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRA-SHKKI  309 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~-~H~~~  309 (457)
                      +|++++||.|.+|++.|.....|..|++ +|+++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4889999999999999999999999999 99984

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.05  E-value=2.7e-06  Score=64.96  Aligned_cols=30  Identities=27%  Similarity=0.380  Sum_probs=28.2

Q ss_pred             CCcccccCCCCcccCCCCchhhHhhhccCC
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMRSHMIT   31 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR~H~~~   31 (457)
                      ++|+|.|.+|+|+|.....|..|||+|+..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            689999999999999999999999999954

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.05  E-value=9.8e-07  Score=53.54  Aligned_cols=26  Identities=31%  Similarity=0.517  Sum_probs=23.9

Q ss_pred             ccccCCCCcccCCCCchhhHhhhccC
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +|.|.+|+|+|.....|..||++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            68999999999999999999999983

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.04  E-value=1.9e-06  Score=52.15  Aligned_cols=26  Identities=31%  Similarity=0.562  Sum_probs=24.2

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ||.|++|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            69999999999999999999999986

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.2e-07  Score=55.54  Aligned_cols=27  Identities=33%  Similarity=0.513  Sum_probs=25.4

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|+|+|.....|..||++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            589999999999999999999999983

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.03  E-value=1.1e-06  Score=54.16  Aligned_cols=27  Identities=33%  Similarity=0.634  Sum_probs=25.4

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|+++|.....|..||++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            589999999999999999999999983

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=2.6e-06  Score=53.98  Aligned_cols=29  Identities=31%  Similarity=0.427  Sum_probs=26.9

Q ss_pred             CccccCC--CCCCCCCCchhhhhhhhhccCC
Q 038961          368 KKKHECP--ICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       368 eKp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ++||.|+  .|++.|.+...|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4799999  8999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.02  E-value=1.6e-06  Score=53.56  Aligned_cols=27  Identities=15%  Similarity=0.332  Sum_probs=25.5

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|++.|.....|..||++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            589999999999999999999999984

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.6e-07  Score=55.05  Aligned_cols=29  Identities=31%  Similarity=0.360  Sum_probs=26.8

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ++||.|++|++.|.+...|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.7e-07  Score=54.82  Aligned_cols=28  Identities=32%  Similarity=0.517  Sum_probs=26.1

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999999874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.98  E-value=2.8e-06  Score=53.45  Aligned_cols=28  Identities=32%  Similarity=0.528  Sum_probs=26.1

Q ss_pred             ccccCC--CCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECP--ICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|+  .|++.|.+...|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589998  9999999999999999999874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=9.2e-07  Score=53.41  Aligned_cols=26  Identities=35%  Similarity=0.469  Sum_probs=24.5

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |||.|++|++.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999984

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.96  E-value=1.2e-06  Score=53.79  Aligned_cols=27  Identities=30%  Similarity=0.455  Sum_probs=25.5

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ++|.|.+|++.|.....|..||++|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            589999999999999999999999983

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.96  E-value=3.3e-06  Score=52.10  Aligned_cols=28  Identities=18%  Similarity=0.246  Sum_probs=26.2

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            5899999999999999999999999874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.95  E-value=1.9e-06  Score=54.24  Aligned_cols=27  Identities=30%  Similarity=0.595  Sum_probs=25.4

Q ss_pred             cccccC--CCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCK--FCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck--~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +||.|.  +|+|+|.....|..|||+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            589998  999999999999999999984

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.95  E-value=1.9e-06  Score=52.88  Aligned_cols=28  Identities=29%  Similarity=0.351  Sum_probs=26.2

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +||.|++|++.|.+...|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5899999999999999999999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=4.6e-06  Score=51.69  Aligned_cols=28  Identities=25%  Similarity=0.441  Sum_probs=25.9

Q ss_pred             ccccCCCCCCCCCCchhhhhh-hhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGH-KRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H-~r~H~~~  396 (457)
                      +||.|++|++.|.+...|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            589999999999999999999 8999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=2.8e-06  Score=59.52  Aligned_cols=35  Identities=26%  Similarity=0.496  Sum_probs=32.4

Q ss_pred             hhhhcCCCCccccC--CCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECA--TCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~--~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+..|++++||.|.  .|++.|.....|..|+++|++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            55679999999996  799999999999999999998

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.91  E-value=2.7e-06  Score=56.23  Aligned_cols=31  Identities=23%  Similarity=0.454  Sum_probs=29.5

Q ss_pred             cCCCCccccCC--CCCccCCchhhhhhccccCC
Q 038961          278 SQKRSKFECAT--CNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       278 h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |++++||.|.+  |++.|...+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            78999999995  99999999999999999998

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.91  E-value=2.5e-06  Score=57.11  Aligned_cols=29  Identities=21%  Similarity=0.235  Sum_probs=26.4

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhc
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      ++|+|||.|++|+|+|.+.+.|..|+..+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~   31 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeE
Confidence            78899999999999999999999998443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.84  E-value=5.2e-06  Score=51.41  Aligned_cols=27  Identities=22%  Similarity=0.357  Sum_probs=25.2

Q ss_pred             cccccCCCCcccCCCCchhhH-hhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGH-MRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~H-mR~H~~   30 (457)
                      ++|.|.+|++.|.....|..| +++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            589999999999999999999 799984

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.78  E-value=4.1e-06  Score=51.38  Aligned_cols=26  Identities=35%  Similarity=0.614  Sum_probs=24.9

Q ss_pred             cccccC--CCCcccCCCCchhhHhhhcc
Q 038961            4 FKHVCK--FCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         4 k~~~Ck--~C~K~F~~~~~L~~HmR~H~   29 (457)
                      ++|.|+  +|+|.|.....|..|||+|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            579999  99999999999999999997

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.71  E-value=5.6e-06  Score=55.41  Aligned_cols=28  Identities=18%  Similarity=0.332  Sum_probs=25.2

Q ss_pred             CCCcccccCCCCcccCCCCchhhHhhhc
Q 038961            1 DREFKHVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         1 ~~ek~~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      .+||||.|.+|+|+|.....|..||+-+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~py~   31 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHHHHT
T ss_pred             CCccCeECCCCCCccCCHhHccCcCCeE
Confidence            4799999999999999999999999543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.69  E-value=8.4e-06  Score=49.93  Aligned_cols=27  Identities=26%  Similarity=0.368  Sum_probs=25.2

Q ss_pred             ccccCC--CCCCCCCCchhhhhhhhhccC
Q 038961          369 KKHECP--ICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       369 Kp~~C~--~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      +||.|+  .|++.|.+...|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.18  E-value=0.00096  Score=56.96  Aligned_cols=29  Identities=28%  Similarity=0.424  Sum_probs=27.2

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhc
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      |+|++||.|..|+|.|.+..+|..|+|+.
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            89999999999999999999999998763

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.61  E-value=0.0017  Score=55.50  Aligned_cols=28  Identities=29%  Similarity=0.377  Sum_probs=25.9

Q ss_pred             CCcccccCCCCcccCCCCchhhHhhhcc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |+++|.|.+|+|.|.+...|..|+|+..
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            6899999999999999999999998665

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.66  E-value=0.0038  Score=53.59  Aligned_cols=83  Identities=20%  Similarity=0.279  Sum_probs=51.4

Q ss_pred             CCccccCCCCCccCCchhhhhhc--cccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCC
Q 038961          281 RSKFECATCNKIFHSYQALGGHR--ASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDD  358 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~--~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~  358 (457)
                      .+++.|.+|...|.+...+..|.  +.|...           .+.+.+..+.....-++.+..      ..+...     
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~-----------v~~~~~~~~~~~~~~~~~~~~------~~~~~~-----   87 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANK-----------VRRYMAINQGEDSVPAKKFKA------APAEIS-----   87 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHH-----------HHHHHHHTTCCCCCSCCCCSC------CSSCCS-----
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHH-----------HHHHhcccCcccCCCCCccCC------Cccccc-----
Confidence            36799999999999999999998  567541           122221100000000000000      011112     


Q ss_pred             CccccccCCCccccCCCCCCCCCCchhhhhhhh
Q 038961          359 HRAETSCGAKKKHECPICLKVFPSGQALGGHKR  391 (457)
Q Consensus       359 ~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r  391 (457)
                            +.+.+.|.|.+|++.|.+...|..|..
T Consensus        88 ------~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           88 ------DGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             ------SCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ------cCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence                  566788999999999999999999963

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.14  E-value=0.011  Score=41.26  Aligned_cols=24  Identities=29%  Similarity=0.603  Sum_probs=22.3

Q ss_pred             cccccCCCCcccCCCCchhhHhhh
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      -+|.|.-|++.|....+|.+||+-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            579999999999999999999983

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=93.20  E-value=0.033  Score=41.62  Aligned_cols=38  Identities=11%  Similarity=0.111  Sum_probs=31.8

Q ss_pred             chhhhhhc-cccCCCCccccccCCCc------cccCC--CCCCCCCCchhhhhhhhhc
Q 038961          345 ENSADHFF-VADCDDHRAETSCGAKK------KHECP--ICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       345 ~~L~~H~~-~~~~~~~~~~~~H~geK------p~~C~--~Cgk~F~~~~~L~~H~r~H  393 (457)
                      ..|..|+. .           |.+.+      +|.|.  .|++.+.....|..|+|+.
T Consensus        17 ~~l~~Hv~~~-----------Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           17 FDLQRHLLKD-----------HVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             HHHHHHHHHH-----------SCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             HHHHHHHHhh-----------ccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            88999984 5           66554      89997  7999999999999999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.12  E-value=0.037  Score=38.66  Aligned_cols=27  Identities=30%  Similarity=0.444  Sum_probs=23.9

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      -+|.|+.|++.|.....|++||+---+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            579999999999999999999985444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=92.68  E-value=0.028  Score=48.05  Aligned_cols=26  Identities=27%  Similarity=0.406  Sum_probs=23.8

Q ss_pred             cccccCCCCcccCCCCchhhHh--hhcc
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHM--RSHM   29 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~Hm--R~H~   29 (457)
                      +++.|++|+.+|.+...+..|.  +.|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~   58 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHA   58 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHH
Confidence            5688999999999999999999  7887

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=89.55  E-value=0.14  Score=38.08  Aligned_cols=56  Identities=13%  Similarity=0.137  Sum_probs=37.4

Q ss_pred             cccC--CCCCccCCchhhhhhc-cccCCccCccccccCCCCCCccCC--CCCCCCcchhhhhccCcchhhhhhcc
Q 038961          284 FECA--TCNKIFHSYQALGGHR-ASHKKIKGCFATKIDSSENSIEAE--HSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       284 y~C~--~C~K~F~s~~~L~~H~-~~H~~~k~~~~~~c~~cekp~~C~--~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      |.|.  .|++.|.+...|..|+ ..|.+.+...      -..+|.|.  -|+..+.      ..  ..|..|+++
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~------~~~~~~C~W~~C~~~~~------~~--~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKH------PMEPLACNWEDCDFLGD------DT--ASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCC------SSCCEECCCSSCCCEES------SH--HHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCC------CCCCCEeeCCCCcCCCC------Ch--HHHHhhccc
Confidence            4564  4999999999999998 5898732100      02378886  5554333      22  668889886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	457
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	3e-10
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-09
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-08

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.8 bits (127), Expect = 3e-10
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 369 KKHECPICLKVFPSGQALGGHKRSH 393
           + + C  C + F S QALGGH   H
Sbjct: 4   RSYTCSFCKREFRSAQALGGHMNVH 28

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.5 bits (121), Expect = 2e-09
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 283 KFECATCNKIFHSYQALGGHRASHKKIK 310
            + C+ C + F S QALGGH   H++ +
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.2 bits (115), Expect = 1e-08
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 5  KHVCKFCSKSFPCGRSLGGHMRSH 28
           + C FC + F   ++LGGHM  H
Sbjct: 5  SYTCSFCKREFRSAQALGGHMNVH 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	457
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.4
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.25
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.17
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.03
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.0
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.98
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.94
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.91
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.9
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.87
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.82
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.82
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.81
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.78
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.72
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.71
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.7
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.69
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.61
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.61
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.61
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.5
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.48
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.47
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.46
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.43
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.43
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.29
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.28
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.18
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.13
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.89
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.6
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.51
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.42
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.39
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.34
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.25
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.15
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.11
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.97
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.97
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.93
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.93
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.9
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.84
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.79
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.76
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.61
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.41
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.39
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.37
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.34
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.7
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.64
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.53
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.38
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.37
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.12
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.87
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.7
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.56
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.06
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.64
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.6
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.51
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.47
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.42
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.8
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.62
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.37
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.99
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.94
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.57
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.59
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	88.88
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	88.64
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	88.39
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	86.68
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.91
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	85.35
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.5
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.07
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.81
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	81.69
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	81.5
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	80.58

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.2e-14  Score=103.85  Aligned_cols=53  Identities=17%  Similarity=0.276  Sum_probs=49.2

Q ss_pred             CCCccCCCCCCCCcchhhhhccCcchhhhhhccccCCCCccccccCCCccccCCCCCCCCCCchhhhhhhhhc
Q 038961          321 ENSIEAEHSPDPTADSKLIKSINNENSADHFFVADCDDHRAETSCGAKKKHECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       321 ekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~~~~~~~~~~~~H~geKp~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      ||||.|+ |++.|...        ..|..|+++           |+|+|||.|++||++|.+...|..|+|+|
T Consensus         1 EK~y~C~-Cgk~F~~~--------~~l~~H~~~-----------Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHK--------SQRDRHMSM-----------HLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSH--------HHHHHHHHH-----------HSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCH--------HHhHHHhhc-----------cccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 88888755        899999999           99999999999999999999999999998

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=6.3e-13  Score=95.95  Aligned_cols=52  Identities=13%  Similarity=0.188  Sum_probs=47.9

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCCccCccccccCCCCCCccCCCCCCCCcchhhhhccCcchhhhhhcc
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEHSPDPTADSKLIKSINNENSADHFFV  353 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~C~k~f~~~k~f~~~~~~~L~~H~~~  353 (457)
                      |+||.|+ ||++|.....|..|+++|++            ++||.|.+|++.|...        +.|..|+++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~------------ekpy~C~~C~k~F~~~--------~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG------------LRPYGCGVCGKKFKMK--------HHLVGHMKI   52 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC------------CCSEECTTTSCEESSS--------HHHHHHHTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc------------ccCCcCCCcCCEecCH--------HHHHHHHhc
Confidence            6899995 99999999999999999999            9999999988887744        899999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4.4e-12  Score=84.95  Aligned_cols=32  Identities=25%  Similarity=0.483  Sum_probs=31.3

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |+++|||+|++|||+|.+.++|..|+|+|+|+
T Consensus         7 Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           7 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            99999999999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=8.4e-12  Score=80.54  Aligned_cols=32  Identities=28%  Similarity=0.368  Sum_probs=31.1

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |+|+|||+|.+||++|.+.+.|..|+|+|+|+
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            99999999999999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=4.7e-11  Score=79.32  Aligned_cols=31  Identities=29%  Similarity=0.623  Sum_probs=30.1

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |+|||||+|++|+++|.+.+.|..|+++|.+
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            9999999999999999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=5.5e-11  Score=77.67  Aligned_cols=32  Identities=25%  Similarity=0.468  Sum_probs=30.7

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |+|+|||+|++|+|.|.+..+|..|+|+|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            89999999999999999999999999999874

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6.1e-11  Score=78.21  Aligned_cols=32  Identities=25%  Similarity=0.240  Sum_probs=30.9

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |+|+|||+|.+||++|.+.+.|..|+++|+++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            99999999999999999999999999999874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=6.2e-11  Score=79.21  Aligned_cols=36  Identities=25%  Similarity=0.534  Sum_probs=34.4

Q ss_pred             hhhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          273 EFYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       273 ~~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      .|+++|++++||.|.+|||+|...++|..|+++|+|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            477899999999999999999999999999999998

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=4.8e-11  Score=73.92  Aligned_cols=28  Identities=25%  Similarity=0.567  Sum_probs=26.9

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ||||+|.+|+|+|.....|..|||+|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999983

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.6e-10  Score=77.27  Aligned_cols=37  Identities=24%  Similarity=0.443  Sum_probs=34.2

Q ss_pred             CCCccccCCCCCccCCchhhhhhcc-ccCCccCccccccCCCCCCccCCC
Q 038961          280 KRSKFECATCNKIFHSYQALGGHRA-SHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       280 ~ekpy~C~~C~K~F~s~~~L~~H~~-~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      .+|||+|.+|||+|....+|..|++ +|++            +|||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~------------ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS------------ERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCC------------CCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCC------------CcCcCCcC
Confidence            4799999999999999999999975 8999            99999974

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=1.1e-10  Score=72.35  Aligned_cols=28  Identities=32%  Similarity=0.655  Sum_probs=27.1

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ||||+|++|+|+|.+.+.|..|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.5e-10  Score=77.46  Aligned_cols=28  Identities=29%  Similarity=0.591  Sum_probs=26.4

Q ss_pred             CCcccccCCCCcccCCCCchhhHhh-hcc
Q 038961            2 REFKHVCKFCSKSFPCGRSLGGHMR-SHM   29 (457)
Q Consensus         2 ~ek~~~Ck~C~K~F~~~~~L~~HmR-~H~   29 (457)
                      -+|||+|++|+|+|.....|..||| +|+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC
Confidence            4799999999999999999999986 899

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.9e-10  Score=74.01  Aligned_cols=32  Identities=22%  Similarity=0.416  Sum_probs=31.1

Q ss_pred             hcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +|++++||+|.+|||+|...+.|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            59999999999999999999999999999998

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.87  E-value=3.1e-10  Score=75.24  Aligned_cols=35  Identities=26%  Similarity=0.467  Sum_probs=33.1

Q ss_pred             hhhhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          274 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       274 ~~~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |.|+|+|++||+|.+|+++|.+.++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56899999999999999999999999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=3.9e-10  Score=74.28  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=31.8

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+|+|++||+|.+|+|+|...+.|..|+++|.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            579999999999999999999999999999987

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.82  E-value=5.9e-10  Score=69.64  Aligned_cols=28  Identities=29%  Similarity=0.578  Sum_probs=27.0

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++|+++|.+.+.|..|+|+|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            7999999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.82  E-value=3.6e-10  Score=70.64  Aligned_cols=27  Identities=33%  Similarity=0.634  Sum_probs=26.0

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |||.|.+|+|+|.....|..|||+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            699999999999999999999999994

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=5.3e-10  Score=73.56  Aligned_cols=31  Identities=23%  Similarity=0.315  Sum_probs=28.1

Q ss_pred             cCCCccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          365 CGAKKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       365 H~geKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |+|||||+|++|++.|++.++|..|++.|++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            9999999999999999999999999765443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=7.8e-10  Score=72.09  Aligned_cols=31  Identities=23%  Similarity=0.420  Sum_probs=30.2

Q ss_pred             cCCCCccccCCCCCccCCchhhhhhccccCC
Q 038961          278 SQKRSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       278 h~~ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |+|++||+|.+|+|.|.+..+|..|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            7999999999999999999999999999997

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=9.9e-10  Score=68.53  Aligned_cols=28  Identities=36%  Similarity=0.592  Sum_probs=27.0

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++|||+|.+.+.|..|+|+|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            7999999999999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=7.2e-10  Score=69.17  Aligned_cols=27  Identities=30%  Similarity=0.523  Sum_probs=26.0

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |||.|.+|+|+|...+.|..|||+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            799999999999999999999999994

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.72  E-value=1.2e-09  Score=76.10  Aligned_cols=32  Identities=28%  Similarity=0.462  Sum_probs=30.8

Q ss_pred             cCCCccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          365 CGAKKKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       365 H~geKp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |+|+|||.|++  |+++|.+.++|..|+|+|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            89999999988  999999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.71  E-value=1.1e-09  Score=71.22  Aligned_cols=28  Identities=36%  Similarity=0.777  Sum_probs=26.1

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      .+.|+|++|+|.|.++.+|||||++|..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcc
Confidence            4679999999999999999999999983

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.3e-09  Score=65.86  Aligned_cols=26  Identities=35%  Similarity=0.542  Sum_probs=25.1

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |||+|..|||+|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=9.8e-10  Score=66.36  Aligned_cols=26  Identities=31%  Similarity=0.420  Sum_probs=25.2

Q ss_pred             cccccCCCCcccCCCCchhhHhhhcc
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |||.|++|||+|...+.|..|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=2.3e-09  Score=67.34  Aligned_cols=27  Identities=33%  Similarity=0.556  Sum_probs=25.8

Q ss_pred             cccccCC--CCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |||+|.+  |+|+|.....|..|||+|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            7999998  99999999999999999994

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=3.5e-09  Score=66.43  Aligned_cols=27  Identities=41%  Similarity=0.670  Sum_probs=25.9

Q ss_pred             cccccCC--CCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |||+|.+  |+|+|.....|..|||+|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            7999999  99999999999999999995

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=4.4e-09  Score=69.03  Aligned_cols=33  Identities=18%  Similarity=0.420  Sum_probs=29.3

Q ss_pred             hhcCCCCccccCCCCCccCCchhhhhhccc-cCC
Q 038961          276 KDSQKRSKFECATCNKIFHSYQALGGHRAS-HKK  308 (457)
Q Consensus       276 ~~h~~ekpy~C~~C~K~F~s~~~L~~H~~~-H~~  308 (457)
                      |+|+|++||.|++|++.|....+|..|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            479999999999999999999999999765 543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=6.9e-09  Score=65.07  Aligned_cols=28  Identities=36%  Similarity=0.576  Sum_probs=26.7

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++  |+|+|.+.++|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7999999  999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=6e-09  Score=65.40  Aligned_cols=28  Identities=32%  Similarity=0.443  Sum_probs=26.6

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|++  |+|+|.+.++|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7999988  999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=1.6e-08  Score=64.26  Aligned_cols=28  Identities=29%  Similarity=0.462  Sum_probs=26.8

Q ss_pred             CcccccCC--CCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCKF--CSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck~--C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ||||.|.+  |+|+|.....|..|||+|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            79999999  99999999999999999993

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.9e-08  Score=61.79  Aligned_cols=26  Identities=35%  Similarity=0.685  Sum_probs=25.0

Q ss_pred             cccccCC--CCcccCCCCchhhHhhhcc
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~HmR~H~   29 (457)
                      |||+|.+  |+|+|.....|+.|||+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999999  9999999999999999996

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.2e-08  Score=58.83  Aligned_cols=25  Identities=40%  Similarity=0.772  Sum_probs=24.3

Q ss_pred             ccccCCCCcccCCCCchhhHhhhcc
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      ||+|.+|+|.|.....|+-|||+|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            6899999999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=1.6e-08  Score=63.95  Aligned_cols=27  Identities=30%  Similarity=0.595  Sum_probs=25.1

Q ss_pred             cccccC--CCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCK--FCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck--~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |||+|.  .|+|+|.....|..|||+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            689996  599999999999999999994

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.46  E-value=1.6e-08  Score=70.33  Aligned_cols=32  Identities=25%  Similarity=0.502  Sum_probs=30.9

Q ss_pred             hcCCCCccccCC--CCCccCCchhhhhhccccCC
Q 038961          277 DSQKRSKFECAT--CNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       277 ~h~~ekpy~C~~--C~K~F~s~~~L~~H~~~H~~  308 (457)
                      .|++++||.|.+  |+|+|...++|..|+++|+|
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            599999999988  99999999999999999999

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3.6e-08  Score=56.85  Aligned_cols=26  Identities=35%  Similarity=0.630  Sum_probs=24.9

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ||+|++|+|.|+++..|+.|||+|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            78999999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.7e-08  Score=62.21  Aligned_cols=28  Identities=32%  Similarity=0.528  Sum_probs=26.1

Q ss_pred             ccccCC--CCCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECP--ICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|+  .|+|+|++.++|..|+|+|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            699996  5999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2.3e-08  Score=65.42  Aligned_cols=33  Identities=27%  Similarity=0.486  Sum_probs=31.0

Q ss_pred             cccCC--CCCccCCchhhhhhccccCCccCccccccCCCCCCccCCC
Q 038961          284 FECAT--CNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAEH  328 (457)
Q Consensus       284 y~C~~--C~K~F~s~~~L~~H~~~H~~~k~~~~~~c~~cekp~~C~~  328 (457)
                      |.|.+  |+|+|.+..+|.+|+++|++            +|||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg------------ekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD------------TRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT------------SCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC------------CCCEeCCC
Confidence            78987  99999999999999999999            99999974

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=1.9e-08  Score=62.45  Aligned_cols=27  Identities=26%  Similarity=0.486  Sum_probs=25.6

Q ss_pred             cccccCC--CCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |||+|.+  |+|+|.....|..|+|+|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999999  99999999999999999983

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=7.7e-08  Score=61.08  Aligned_cols=29  Identities=31%  Similarity=0.454  Sum_probs=27.2

Q ss_pred             CccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          368 KKKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       368 eKp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ||||.|++  |+|.|.+.++|.+|+|+|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999988  999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=3.6e-08  Score=61.15  Aligned_cols=27  Identities=30%  Similarity=0.573  Sum_probs=25.8

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhccC
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |||.|++  |+|+|.+.++|..|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999988  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.1e-07  Score=58.42  Aligned_cols=26  Identities=31%  Similarity=0.603  Sum_probs=24.8

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhcc
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |||.|++  |||+|.+.++|.+|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999988  9999999999999999996

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=6.5e-08  Score=63.22  Aligned_cols=24  Identities=38%  Similarity=0.660  Sum_probs=23.2

Q ss_pred             cccCC--CCcccCCCCchhhHhhhcc
Q 038961            6 HVCKF--CSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         6 ~~Ck~--C~K~F~~~~~L~~HmR~H~   29 (457)
                      |.|.+  |+|+|.....|+.|||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht   27 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS   27 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC
Confidence            78987  9999999999999999999

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=1.7e-07  Score=55.73  Aligned_cols=27  Identities=22%  Similarity=0.539  Sum_probs=26.2

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhcc
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      ||||.|++||+.|+.....+.|+++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            799999999999999999999999997

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.18  E-value=2.8e-07  Score=59.68  Aligned_cols=30  Identities=37%  Similarity=0.656  Sum_probs=27.1

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      +.|+|.+|++.|.+.++|++||+.|..+..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            569999999999999999999999987543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=3.8e-07  Score=54.21  Aligned_cols=27  Identities=30%  Similarity=0.589  Sum_probs=25.8

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      ||||.|.+||+.|++....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999996

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=1.4e-06  Score=52.50  Aligned_cols=29  Identities=31%  Similarity=0.470  Sum_probs=27.5

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      ||||.|++|+..|.++.-+..|.|+|-|+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.2e-05  Score=49.52  Aligned_cols=28  Identities=36%  Similarity=0.702  Sum_probs=26.1

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCC
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      ++...|+.|||.|....+|.+|..+|++
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~   30 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSG   30 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCS
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCC
Confidence            4567899999999999999999999999

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=8e-06  Score=49.15  Aligned_cols=28  Identities=29%  Similarity=0.381  Sum_probs=26.8

Q ss_pred             CcccccCCCCcccCCCCchhhHhhhccC
Q 038961            3 EFKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         3 ek~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      ||||.|.+|+.+|.....+.-|.|+|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            7999999999999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=2.4e-05  Score=45.97  Aligned_cols=28  Identities=29%  Similarity=0.420  Sum_probs=26.6

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      ++||+|.+|...-+..+.|..|+|.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5899999999999999999999999997

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=2e-05  Score=46.13  Aligned_cols=27  Identities=33%  Similarity=0.433  Sum_probs=25.0

Q ss_pred             cccccCCCCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +-|+|-.|||.|...+.|++|.-+|++
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccC
Confidence            358999999999999999999999994

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=2.5e-05  Score=46.11  Aligned_cols=26  Identities=27%  Similarity=0.407  Sum_probs=24.7

Q ss_pred             ccccCCCCcccCCCCchhhHhhhccC
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H~~   30 (457)
                      +|+|.+||.+-.-.+.|+.|+|+|++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             CccccccCcccCCHHHHHHHHHHhcC
Confidence            59999999999999999999999994

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=2.4e-05  Score=45.65  Aligned_cols=26  Identities=31%  Similarity=0.418  Sum_probs=25.2

Q ss_pred             cccccCCCCcccCCCCchhhHhhhcc
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |||+|+.|...-..+++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999997

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=5.6e-05  Score=44.16  Aligned_cols=27  Identities=30%  Similarity=0.411  Sum_probs=25.0

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      .|.|..|||.|...+.|++|.-+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            478999999999999999999999984

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=4.6e-05  Score=43.24  Aligned_cols=24  Identities=33%  Similarity=0.609  Sum_probs=23.0

Q ss_pred             cccCCCCcccCCCCchhhHhhhcc
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~H~   29 (457)
                      |+|.+|.++|-..++|..|+|.|-
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999995

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=7.7e-05  Score=43.80  Aligned_cols=28  Identities=25%  Similarity=0.394  Sum_probs=26.7

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCC
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      ++||+|..|...-+..+.|..|.|.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5899999999999999999999999998

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=7.4e-05  Score=48.44  Aligned_cols=25  Identities=32%  Similarity=0.449  Sum_probs=23.2

Q ss_pred             CCCccccCCCCCCCCCCchhhhhhh
Q 038961          366 GAKKKHECPICLKVFPSGQALGGHK  390 (457)
Q Consensus       366 ~geKp~~C~~Cgk~F~~~~~L~~H~  390 (457)
                      +|-|||+|.+|+|.|.+...+.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            4789999999999999999999995

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.97  E-value=0.00021  Score=40.52  Aligned_cols=24  Identities=33%  Similarity=0.660  Sum_probs=22.9

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhcc
Q 038961          371 HECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |+|..|.++|..+++|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999995

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.00016  Score=41.62  Aligned_cols=25  Identities=44%  Similarity=0.611  Sum_probs=23.9

Q ss_pred             cCCCCCCCCCCchhhhhhhhhccCC
Q 038961          372 ECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       372 ~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +|+.|.|.|.++..|+.|-|.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            6999999999999999999999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00014  Score=42.30  Aligned_cols=26  Identities=27%  Similarity=0.406  Sum_probs=25.0

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |||+|..|...-..++.|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999996

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00014  Score=43.59  Aligned_cols=27  Identities=22%  Similarity=0.385  Sum_probs=24.7

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhccC
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |||.|.+  |+|++...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6999988  99999999999999998764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=9.4e-05  Score=44.32  Aligned_cols=26  Identities=31%  Similarity=0.549  Sum_probs=23.9

Q ss_pred             cccccCC--CCcccCCCCchhhHhhhcc
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~HmR~H~   29 (457)
                      |||.|++  |+|++.-.++|..||++|-
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6899999  9999999999999999753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00018  Score=44.10  Aligned_cols=31  Identities=35%  Similarity=0.473  Sum_probs=27.6

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccCCCC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLLGGN  398 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  398 (457)
                      .|.+.|.+|||.|+.-..|.+|+-+|+++..
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            3568899999999999999999999998754

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00035  Score=42.22  Aligned_cols=26  Identities=31%  Similarity=0.584  Sum_probs=24.8

Q ss_pred             cccccCC--CCcccCCCCchhhHh-hhcc
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHM-RSHM   29 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~Hm-R~H~   29 (457)
                      |||.|.+  |+|.|.+.+.-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            6999999  999999999999997 9998

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00033  Score=41.26  Aligned_cols=26  Identities=23%  Similarity=0.140  Sum_probs=24.8

Q ss_pred             ccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          371 HECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |.|+.||......+-|..|+|+|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            88999999999999999999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.61  E-value=0.00031  Score=42.42  Aligned_cols=26  Identities=23%  Similarity=0.420  Sum_probs=23.1

Q ss_pred             cccCCCCCCCCCCchhhhhh-hhhccC
Q 038961          370 KHECPICLKVFPSGQALGGH-KRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H-~r~H~~  395 (457)
                      ||.|.+|++.|+++.-|.+| ++.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999 556765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.41  E-value=0.00052  Score=39.42  Aligned_cols=24  Identities=42%  Similarity=0.603  Sum_probs=23.3

Q ss_pred             ccCCCCCccCCchhhhhhccccCC
Q 038961          285 ECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       285 ~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +|+.|.|+|.++..|+.|-|.|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            699999999999999999999999

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00053  Score=41.39  Aligned_cols=27  Identities=30%  Similarity=0.500  Sum_probs=24.7

Q ss_pred             ccccCCC--CCCCCCCchhhhhhh-hhccC
Q 038961          369 KKHECPI--CLKVFPSGQALGGHK-RSHLL  395 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~-r~H~~  395 (457)
                      |||.|.+  |.|.|+..+...+|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6999988  999999999999997 99975

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.37  E-value=0.00044  Score=40.62  Aligned_cols=25  Identities=36%  Similarity=0.592  Sum_probs=23.0

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhc
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H  393 (457)
                      -||+|+.  |++.|+..+-|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899976  999999999999999988

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.00034  Score=41.21  Aligned_cols=24  Identities=33%  Similarity=0.632  Sum_probs=22.3

Q ss_pred             ccccCCCCcccCCCCchhhHhhhc
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRSH   28 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~H   28 (457)
                      ||.|+.|+-+|...-.|..||++-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999853

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.70  E-value=0.0012  Score=38.72  Aligned_cols=25  Identities=32%  Similarity=0.615  Sum_probs=22.8

Q ss_pred             CccccCC--CCCccCCchhhhhhcccc
Q 038961          282 SKFECAT--CNKIFHSYQALGGHRASH  306 (457)
Q Consensus       282 kpy~C~~--C~K~F~s~~~L~~H~~~H  306 (457)
                      .||+|..  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899976  999999999999999887

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.64  E-value=0.002  Score=37.79  Aligned_cols=29  Identities=24%  Similarity=0.389  Sum_probs=26.5

Q ss_pred             CccccCCCCCCCCCCchhhhhhhhhccCC
Q 038961          368 KKKHECPICLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       368 eKp~~C~~Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      +..|.|.+|...|.+.-.|+-||-+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45699999999999999999999999984

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.0018  Score=38.05  Aligned_cols=23  Identities=26%  Similarity=0.428  Sum_probs=21.8

Q ss_pred             cccCCCCCCCCCCchhhhhhhhh
Q 038961          370 KHECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                      ||.|..|.-.|..+.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999976

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0025  Score=40.50  Aligned_cols=29  Identities=31%  Similarity=0.524  Sum_probs=25.6

Q ss_pred             CCccccC--CCCCCCCCCchhhhhhhhhccC
Q 038961          367 AKKKHEC--PICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       367 geKp~~C--~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      .+|||.|  +-|+.+|.+...|..|++.|.-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhee
Confidence            3799999  4599999999999999998864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.37  E-value=0.0026  Score=37.32  Aligned_cols=28  Identities=29%  Similarity=0.548  Sum_probs=26.2

Q ss_pred             CCccccCCCCCccCCchhhhhhccccCC
Q 038961          281 RSKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       281 ekpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +..|.|..|..+|...-.|..||.+|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            4569999999999999999999999998

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.12  E-value=0.0027  Score=37.39  Aligned_cols=27  Identities=33%  Similarity=0.623  Sum_probs=25.0

Q ss_pred             CccccCC--CCCccCCchhhhhhccccCC
Q 038961          282 SKFECAT--CNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       282 kpy~C~~--C~K~F~s~~~L~~H~~~H~~  308 (457)
                      +||.|.+  |.|.|.+...|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            5899976  99999999999999999988

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.005  Score=39.64  Aligned_cols=26  Identities=23%  Similarity=0.438  Sum_probs=23.0

Q ss_pred             CCCCccccCCCCCccCCchhhhhhcc
Q 038961          279 QKRSKFECATCNKIFHSYQALGGHRA  304 (457)
Q Consensus       279 ~~ekpy~C~~C~K~F~s~~~L~~H~~  304 (457)
                      +|-+||.|.+|+|.|--...+-+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999988864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.70  E-value=0.0056  Score=36.80  Aligned_cols=26  Identities=27%  Similarity=0.552  Sum_probs=23.2

Q ss_pred             ccccCCCCCccCCchhhhhhc-cccCC
Q 038961          283 KFECATCNKIFHSYQALGGHR-ASHKK  308 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~-~~H~~  308 (457)
                      ||.|.+|++.|..+.-|.+|+ +.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999995 56776

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.56  E-value=0.0056  Score=35.99  Aligned_cols=28  Identities=32%  Similarity=0.369  Sum_probs=25.0

Q ss_pred             ccccCCC--CCCCCCCchhhhhhhhhccCC
Q 038961          369 KKHECPI--CLKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       369 Kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  396 (457)
                      |||.|..  |.|.|.+--.|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5888865  999999999999999999874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.06  E-value=0.0053  Score=38.10  Aligned_cols=26  Identities=38%  Similarity=0.543  Sum_probs=20.5

Q ss_pred             cccc--CCCC---cccCCCCchhhHhhhccC
Q 038961            5 KHVC--KFCS---KSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         5 ~~~C--k~C~---K~F~~~~~L~~HmR~H~~   30 (457)
                      .|.|  .-|.   |.|...-.|..|||+||+
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCC
Confidence            4565  3465   569999999999999994

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.64  E-value=0.007  Score=34.07  Aligned_cols=23  Identities=30%  Similarity=0.535  Sum_probs=21.2

Q ss_pred             cccccCCCCcccCCCCchhhHhh
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMR   26 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR   26 (457)
                      .||+|.-|...|...+.|..||-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999983

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.60  E-value=0.02  Score=33.68  Aligned_cols=26  Identities=19%  Similarity=0.305  Sum_probs=23.2

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhcc
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |||+|..|...-+..++|+.|.++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999987743

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.013  Score=33.95  Aligned_cols=26  Identities=31%  Similarity=0.401  Sum_probs=23.6

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      |-+|+.|..+..++.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999953

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.47  E-value=0.013  Score=34.52  Aligned_cols=24  Identities=17%  Similarity=0.408  Sum_probs=22.7

Q ss_pred             cccccCCCCcccCCCCchhhHhhh
Q 038961            4 FKHVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         4 k~~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      |||.|.+|..+-+..+.|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            689999999999999999999985

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.42  E-value=0.012  Score=33.12  Aligned_cols=22  Identities=23%  Similarity=0.431  Sum_probs=20.5

Q ss_pred             cccCCCCCCCCCCchhhhhhhh
Q 038961          370 KHECPICLKVFPSGQALGGHKR  391 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r  391 (457)
                      ||+|.-|...|.++..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999963

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.80  E-value=0.022  Score=32.71  Aligned_cols=22  Identities=32%  Similarity=0.561  Sum_probs=20.2

Q ss_pred             cccCCCCCCCCCCchhhhhhhh
Q 038961          370 KHECPICLKVFPSGQALGGHKR  391 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r  391 (457)
                      ||+|..|||.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999954

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.62  E-value=0.017  Score=36.53  Aligned_cols=31  Identities=23%  Similarity=0.435  Sum_probs=27.3

Q ss_pred             CCccccc--CCCCcccCCCCchhhHhhhccCCC
Q 038961            2 REFKHVC--KFCSKSFPCGRSLGGHMRSHMITV   32 (457)
Q Consensus         2 ~ek~~~C--k~C~K~F~~~~~L~~HmR~H~~~~   32 (457)
                      .+|||.|  .-|+.+|.+-..|..|..-|.+..
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m~L   35 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhheeee
Confidence            4899999  559999999999999999998543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.50  E-value=0.03  Score=31.51  Aligned_cols=22  Identities=27%  Similarity=0.697  Sum_probs=20.0

Q ss_pred             ccCCCCCCCCCCchhhhhhhhh
Q 038961          371 HECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       371 ~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                      |.|++|.+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.37  E-value=0.037  Score=31.98  Aligned_cols=26  Identities=27%  Similarity=0.319  Sum_probs=23.5

Q ss_pred             ccccCCCCCccCCchhhhhhccccCC
Q 038961          283 KFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      |-+|..|..+..++.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999954

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.99  E-value=0.043  Score=33.88  Aligned_cols=20  Identities=30%  Similarity=0.252  Sum_probs=17.8

Q ss_pred             CCCCCCchhhhhhhhhccCC
Q 038961          377 LKVFPSGQALGGHKRSHLLG  396 (457)
Q Consensus       377 gk~F~~~~~L~~H~r~H~~~  396 (457)
                      ++.|.....|..|+|+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            46699999999999999985

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.94  E-value=0.032  Score=32.69  Aligned_cols=25  Identities=16%  Similarity=0.303  Sum_probs=21.9

Q ss_pred             ccccCCCCCCCCCCchhhhhhhhhc
Q 038961          369 KKHECPICLKVFPSGQALGGHKRSH  393 (457)
Q Consensus       369 Kp~~C~~Cgk~F~~~~~L~~H~r~H  393 (457)
                      +||+|..|.---.+.++|..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            6999999998889999999997653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.57  E-value=0.043  Score=32.12  Aligned_cols=24  Identities=21%  Similarity=0.344  Sum_probs=21.7

Q ss_pred             CccccCCCCCccCCchhhhhhccc
Q 038961          282 SKFECATCNKIFHSYQALGGHRAS  305 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~  305 (457)
                      +||+|.+|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            699999999999999999999864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.59  E-value=0.068  Score=30.63  Aligned_cols=22  Identities=36%  Similarity=0.721  Sum_probs=20.1

Q ss_pred             ccccCCCCCccCCchhhhhhcc
Q 038961          283 KFECATCNKIFHSYQALGGHRA  304 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~  304 (457)
                      ||+|..|||.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999864

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.88  E-value=0.044  Score=30.83  Aligned_cols=22  Identities=27%  Similarity=0.623  Sum_probs=20.3

Q ss_pred             cccCCCCcccCCCCchhhHhhh
Q 038961            6 HVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         6 ~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      |.|.+|.|.|.....+..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.64  E-value=0.085  Score=34.94  Aligned_cols=26  Identities=31%  Similarity=0.543  Sum_probs=23.7

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      -|.|-+|+|.|.....|+.|...|-.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            48899999999999999999988864

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.073  Score=30.62  Aligned_cols=23  Identities=39%  Similarity=0.686  Sum_probs=21.0

Q ss_pred             cccCCCCCCCCCCchhhhhhhhh
Q 038961          370 KHECPICLKVFPSGQALGGHKRS  392 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~  392 (457)
                      .|.|+.|+-..++++.|+.|+|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            38999999999999999999875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.094  Score=34.74  Aligned_cols=27  Identities=30%  Similarity=0.593  Sum_probs=23.8

Q ss_pred             CccccCCCCCccCCchhhhhhccccCC
Q 038961          282 SKFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       282 kpy~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      .-|.|-.|+|.|.....|+.|...|--
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            358999999999999999999988843

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.91  E-value=0.063  Score=38.83  Aligned_cols=23  Identities=35%  Similarity=0.595  Sum_probs=21.3

Q ss_pred             ccccCCCCcccCCCCchhhHhhh
Q 038961            5 KHVCKFCSKSFPCGRSLGGHMRS   27 (457)
Q Consensus         5 ~~~Ck~C~K~F~~~~~L~~HmR~   27 (457)
                      .|-|-+|+|.|.+..+|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            48999999999999999999974

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.35  E-value=0.16  Score=29.35  Aligned_cols=19  Identities=32%  Similarity=0.578  Sum_probs=17.7

Q ss_pred             CCCCCCCchhhhhhhhhcc
Q 038961          376 CLKVFPSGQALGGHKRSHL  394 (457)
Q Consensus       376 Cgk~F~~~~~L~~H~r~H~  394 (457)
                      |+|.|+..++++.|+.+|-
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            9999999999999998883

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.50  E-value=0.09  Score=30.02  Aligned_cols=24  Identities=42%  Similarity=0.670  Sum_probs=21.6

Q ss_pred             cccCC--CCcccCCCCchhhHhhhcc
Q 038961            6 HVCKF--CSKSFPCGRSLGGHMRSHM   29 (457)
Q Consensus         6 ~~Ck~--C~K~F~~~~~L~~HmR~H~   29 (457)
                      |+|.+  |+|.|.....|+.|.-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            77854  9999999999999999997

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.07  E-value=0.14  Score=30.31  Aligned_cols=27  Identities=22%  Similarity=0.555  Sum_probs=24.7

Q ss_pred             cccccCC--CCcccCCCCchhhHhhhccC
Q 038961            4 FKHVCKF--CSKSFPCGRSLGGHMRSHMI   30 (457)
Q Consensus         4 k~~~Ck~--C~K~F~~~~~L~~HmR~H~~   30 (457)
                      |+|.|.+  |+-.|...+-|..|+-.|++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            6799976  99999999999999999984

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.81  E-value=0.15  Score=29.03  Aligned_cols=24  Identities=33%  Similarity=0.664  Sum_probs=20.7

Q ss_pred             cccC--CCCCccCCchhhhhhccccC
Q 038961          284 FECA--TCNKIFHSYQALGGHRASHK  307 (457)
Q Consensus       284 y~C~--~C~K~F~s~~~L~~H~~~H~  307 (457)
                      |.|.  -|+|+|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5674  49999999999999998886

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.69  E-value=0.24  Score=30.16  Aligned_cols=26  Identities=23%  Similarity=0.557  Sum_probs=22.8

Q ss_pred             ccccCCCCCccCCchhhhhhccccCC
Q 038961          283 KFECATCNKIFHSYQALGGHRASHKK  308 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~H~~  308 (457)
                      .|.|..|||+|.++..+.+|-..-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999776665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.50  E-value=0.29  Score=29.78  Aligned_cols=26  Identities=19%  Similarity=0.341  Sum_probs=23.0

Q ss_pred             cccCCCCCCCCCCchhhhhhhhhccC
Q 038961          370 KHECPICLKVFPSGQALGGHKRSHLL  395 (457)
Q Consensus       370 p~~C~~Cgk~F~~~~~L~~H~r~H~~  395 (457)
                      .|.|..|||.|.+...+.+|-..-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999877666

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.58  E-value=0.27  Score=28.14  Aligned_cols=23  Identities=30%  Similarity=0.687  Sum_probs=20.9

Q ss_pred             ccccCCCCCccCCchhhhhhccc
Q 038961          283 KFECATCNKIFHSYQALGGHRAS  305 (457)
Q Consensus       283 py~C~~C~K~F~s~~~L~~H~~~  305 (457)
                      .|+|+.|+.....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999864