Citrus Sinensis ID: 038978

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Protein Sequence
MRKWRGNSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYRLS
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEccccccccccccccccccHHHHccccccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHccEEEEEEEcccccccccccccccEEEEEEcccHHcHHHHHHccccHHHHHHHHHHHHHHHccEEEccccccccHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHcccEEEccHcHcEEEEEEEccccccccccccHHHHHHHHHHHHccccccccccccEEEEEccccHHHHHcccHHHHHHHEEEHHccccccccccccccEEEEccccccccccEEEEcccccccccHHHHHHHHHccccEEEEccccccHHHcccHcHEEEEEcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccEEccc
Coil and Loop (DISEMBL)
mrkwrgnssyqtpwkLKRKFAIEGYFFKkiresrflttdpakahlffipVSCHKMRGKFYNWLMVTLKLISLILkypylnrtqgadhfFVTCYDIGVRATEGFHNLWKNSIRVLCsrhkgvslpqiippfllyaggndfedrskfcicpggslgnfaQIVDsihcgcvpviisdfhdlpfndildwnklsmiireDDVHRLNLILKGIiskgkfinsHKNTFKAQKqfewntppikygttFHMVVYELWLRRYFLKYRLS
Flexible Loop (DISEMBL)
mrkwrgnssyqtpwklkrkFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYRLS
Low Complexity Region (SEG)
MRKWRGNSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYRLS
Disordered region (IsUnstruct)
**********QTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYR**
Disordered Region (DISOPRED)
*******SSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYR**
Disordered Region (DISEMBL)
*********YQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYRLS
Disordered Region (DISPRO)
****RGNSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYR**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRKWRGNSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRHKGVSLPQIIPPFLLYAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYRLS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	260	2.2.26 [Sep-21-2011]
Q9FFN2	518	Probable glycosyltransfer	no	no	0.923	0.463	0.306	9e-33
Q9LFP3	480	Probable glycosyltransfer	no	no	0.926	0.502	0.293	2e-29
Q3E7Q9	480	Probable glycosyltransfer	no	no	0.915	0.495	0.286	2e-27
Q3E9A4	466	Probable glycosyltransfer	no	no	0.903	0.504	0.288	3e-27
Q94AA9	500	Xylogalacturonan beta-1,3	no	no	0.896	0.466	0.278	5e-26
Q9SSE8	470	Probable glycosyltransfer	no	no	0.915	0.506	0.271	6e-26
Q3EAR7	470	Probable glycosyltransfer	no	no	0.888	0.491	0.274	3e-25
Q8S1X8	415	Probable glucuronosyltran	no	no	0.888	0.556	0.254	1e-15
Q6H4N0	434	Probable glucuronosyltran	no	no	0.761	0.456	0.267	2e-15
Q940Q8	415	Probable beta-1,4-xylosyl	no	no	0.903	0.566	0.242	6e-15

>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2

 Score =  140 bits (353), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 70/310 (22%)

Query: 17  KRKFAIEGYFFKKIR-ESRFLTTDPAKAHLFFIPVSCHKM-------RGKFYNWLMVTLK 68
           K  +++EG F  +I  ++RF T +P KAH+F++P S  KM         + ++ +  T+K
Sbjct: 209 KSIYSMEGSFIYEIETDTRFRTNNPDKAHVFYLPFSVVKMVRYVYERNSRDFSPIRNTVK 268

Query: 69  -LISLI-LKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRH-------- 118
             I+L+  KYPY NR+ GADHF ++C+D G  A+    +L  NSIR LC+ +        
Sbjct: 269 DYINLVGDKYPYWNRSIGADHFILSCHDWGPEASFSHPHLGHNSIRALCNANTSERFKPR 328

Query: 119 KGVSLPQI------------------IPPFLLYAGG------------------------ 136
           K VS+P+I                   P    +AGG                        
Sbjct: 329 KDVSIPEINLRTGSLTGLVGGPSPSSRPILAFFAGGVHGPVRPVLLQHWENKDNDIRVHK 388

Query: 137 --------NDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNK 188
                   +D    SKFCICP G      +IV++++ GCVPV+I+  +  PF+D+L+W  
Sbjct: 389 YLPRGTSYSDMMRNSKFCICPSGYEVASPRIVEALYSGCVPVLINSGYVPPFSDVLNWRS 448

Query: 189 LSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYEL 248
            S+I+  +D+  L  IL   IS  +++  ++   K ++ FE N+P  ++   FHM+++ +
Sbjct: 449 FSVIVSVEDIPNLKTILTS-ISPRQYLRMYRRVLKVRRHFEVNSPAKRFD-VFHMILHSI 506

Query: 249 WLRRYFLKYR 258
           W+RR  +K R
Sbjct: 507 WVRRLNVKIR 516

May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 76/317 (23%)

Query: 16  LKRKFAIEGYFFKKIRE--SRFLTTDPAKAHLFFIPVSCHKM------------RGKFYN 61
           L   +AIEG F  +I    SRF    P +A +F+IPV    +            R +  N
Sbjct: 167 LNNIYAIEGQFMDEIENGNSRFKAASPEEATVFYIPVGIVNIIRFVYRPYTSYARDRLQN 226

Query: 62  WLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRH--- 118
            +   + LIS   +YPY NR++GADHFF++C+D     +     L+K+ IR LC+ +   
Sbjct: 227 IVKDYISLISN--RYPYWNRSRGADHFFLSCHDWAPDVSAVDPELYKHFIRALCNANSSE 284

Query: 119 -----KGVSLPQI-------------IPP-----FLLYAGGNDFE--------------- 140
                + VSLP+I              PP        +AGG+  +               
Sbjct: 285 GFTPMRDVSLPEINIPHSQLGFVHTGEPPQNRKLLAFFAGGSHGDVRKILFQHWKEKDKD 344

Query: 141 -----------------DRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDI 183
                            D++KFC+CP G      +IV+S++ GCVPVII+D++ LPF+D+
Sbjct: 345 VLVYENLPKTMNYTKMMDKAKFCLCPSGWEVASPRIVESLYSGCVPVIIADYYVLPFSDV 404

Query: 184 LDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHM 243
           L+W   S+ I    +  +  IL+  I++ +++N  +   + +K F  N P   Y    HM
Sbjct: 405 LNWKTFSVHIPISKMPDIKKILEA-ITEEEYLNMQRRVLEVRKHFVINRPSKPYD-MLHM 462

Query: 244 VVYELWLRRYFLKYRLS 260
           +++ +WLRR  ++  LS
Sbjct: 463 IMHSIWLRRLNVRIPLS 479

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 140/311 (45%), Gaps = 73/311 (23%)

Query: 17  KRKFAIEGYFFKKI--RESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLIL 74
           K  +A+EG F  ++  R ++F T DP +A+++F+P S   +    Y        L + + 
Sbjct: 170 KSVYAVEGRFITEMEKRRTKFRTYDPNQAYVYFLPFSVTWLVRYLYEGNSDAKPLKTFVS 229

Query: 75  KY--------PYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRH-------- 118
            Y        P+ NRT GADHF +TC+D G   ++   +L+  SIRV+C+ +        
Sbjct: 230 DYIRLVSTNHPFWNRTNGADHFMLTCHDWGPLTSQANRDLFNTSIRVMCNANSSEGFNPT 289

Query: 119 KGVSLPQI--------------------IPPFL-LYAGG--------------------- 136
           K V+LP+I                      P+L  +AGG                     
Sbjct: 290 KDVTLPEIKLYGGEVDHKLRLSKTLSASPRPYLGFFAGGVHGPVRPILLKHWKQRDLDMP 349

Query: 137 -----------NDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILD 185
                       DF   SKFC CP G      +++++I+  C+PVI+S    LPF D+L 
Sbjct: 350 VYEYLPKHLNYYDFMRSSKFCFCPSGYEVASPRVIEAIYSECIPVILSVNFVLPFTDVLR 409

Query: 186 WNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVV 245
           W   S+++   ++ RL  IL   IS  K+     N    ++ FE N PP ++   FH+ +
Sbjct: 410 WETFSVLVDVSEIPRLKEILMS-ISNEKYEWLKSNLRYVRRHFELNDPPQRFD-AFHLTL 467

Query: 246 YELWLRRYFLK 256
           + +WLRR  LK
Sbjct: 468 HSIWLRRLNLK 478

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 73/308 (23%)

Query: 20  FAIEGYFFKKIRE--SRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLM---------VTLK 68
           ++IEG F  +I    S F   +P +AH F +PVS   +    Y  L+         V L 
Sbjct: 159 YSIEGQFMDEIETGMSPFAANNPEEAHAFLLPVSVANIVHYLYRPLVTYSREQLHKVFLD 218

Query: 69  LISLIL-KYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSR--------HK 119
            + ++  KYPY NR+ GADHF+V+C+D     +     L KN IRVLC+          +
Sbjct: 219 YVDVVAHKYPYWNRSLGADHFYVSCHDWAPDVSGSNPELMKNLIRVLCNANTSEGFMPQR 278

Query: 120 GVSLPQII-------PPFLLYAGGND----------------------FEDR-------- 142
            VS+P+I        PP L  + G+D                      ++D+        
Sbjct: 279 DVSIPEINIPGGHLGPPRLSRSSGHDRPILAFFAGGSHGYIRRILLQHWKDKDEEVQVHE 338

Query: 143 --------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNK 188
                         ++FC+CP G      ++V +I+ GCVPVIISD + LPF+D+LDW K
Sbjct: 339 YLAKNKDYFKLMATARFCLCPSGYEVASPRVVAAINLGCVPVIISDHYALPFSDVLDWTK 398

Query: 189 LSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYEL 248
            ++ +    +  +  ILK  IS  ++    +   + Q+ F  N P   +     M+++ +
Sbjct: 399 FTIHVPSKKIPEIKTILKS-ISWRRYRVLQRRVLQVQRHFVINRPSQPFD-MLRMLLHSV 456

Query: 249 WLRRYFLK 256
           WLRR  L+
Sbjct: 457 WLRRLNLR 464

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 140/316 (44%), Gaps = 83/316 (26%)

Query: 20  FAIEGYFFKKI------RESRFLTTDPAKAHLFFIPVSCHKM---------------RGK 58
           + IEG F  ++        SRF    P  AH+FFIP S  K+               R +
Sbjct: 186 YGIEGQFMDEMCVDGPKSRSRFRADRPENAHVFFIPFSVAKVIHFVYKPITSVEGFSRAR 245

Query: 59  FYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRH 118
            +  +   + +++   K+PY NR+QG DHF V+C+D      +G   L++  IR LC+ +
Sbjct: 246 LHRLIEDYVDVVAT--KHPYWNRSQGGDHFMVSCHDWAPDVIDGNPKLFEKFIRGLCNAN 303

Query: 119 KG--------VSLPQII-------PPFL-----------LYAGGNDFEDR---------- 142
                     VS+P+I        P FL            +AG +  E R          
Sbjct: 304 TSEGFRPNVDVSIPEIYLPKGKLGPSFLGKSPRVRSILAFFAGRSHGEIRKILFQHWKEM 363

Query: 143 ----------------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPF 180
                                 SKFC+CP G      + V++I+ GCVPVIISD + LPF
Sbjct: 364 DNEVQVYDRLPPGKDYTKTMGMSKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPF 423

Query: 181 NDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTT 240
           +D+L+W+  S+ I    +  +  IL+  +S  +++  +K   + ++ F  N P   Y   
Sbjct: 424 SDVLNWDSFSIQIPVSRIKEIKTILQS-VSLVRYLKMYKRVLEVKQHFVLNRPAKPYD-V 481

Query: 241 FHMVVYELWLRRYFLK 256
            HM+++ +WLRR  L+
Sbjct: 482 MHMMLHSIWLRRLNLR 497

Involved in pectin biosynthesis. Catalyzes the transfer of xylose from UDP-xylose onto oligogalacturonides and endogenous acceptors.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 4

EC: 1

>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1

 Score =  117 bits (294), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 71/309 (22%)

Query: 17  KRKFAIEGYFFKKIRES--RFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLIL 74
           K  +++EG F   +     ++ T DP KAH++F+P S   +    ++ ++    ++  ++
Sbjct: 162 KDIYSMEGLFLNFMENDVLKYRTRDPDKAHVYFLPFSVVMILHHLFDPVVRDKAVLERVI 221

Query: 75  ---------KYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSRH------- 118
                    KYPY N + G DHF ++C+D G RAT     L+ NSIRVLC+ +       
Sbjct: 222 ADYVQIISKKYPYWNTSDGFDHFMLSCHDWGHRATWYVKKLFFNSIRVLCNANISEYFNP 281

Query: 119 -KGVSLPQI--------------------------------IPPFLL------------- 132
            K    P+I                                I P LL             
Sbjct: 282 EKDAPFPEINLLTGDINNLTGGLDPISRTTLAFFAGKSHGKIRPVLLNHWKEKDKDILVY 341

Query: 133 --YAGGNDFED---RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWN 187
                G D+ +   +S+FCICP G      ++ ++I+ GCVPV+IS+ + LPF+D+L+W 
Sbjct: 342 ENLPDGLDYTEMMRKSRFCICPSGHEVASPRVPEAIYSGCVPVLISENYVLPFSDVLNWE 401

Query: 188 KLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYE 247
           K S+ +   ++  L  IL   I + +++  ++   K ++    N PP +Y   F+M+++ 
Sbjct: 402 KFSVSVSVKEIPELKRILMD-IPEERYMRLYEGVKKVKRHILVNDPPKRYD-VFNMIIHS 459

Query: 248 LWLRRYFLK 256
           +WLRR  +K
Sbjct: 460 IWLRRLNVK 468

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2

 Score =  115 bits (289), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 135/310 (43%), Gaps = 79/310 (25%)

Query: 20  FAIEGYFFKKIR------ESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLI 73
           + IEG F  ++         RF  + P +AH FF+P S   +    Y  +          
Sbjct: 156 YGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFFLPFSVANIVHYVYQPITSPADFNRAR 215

Query: 74  L-------------KYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS---- 116
           L             K+P+ N++ GADHF V+C+D      +     +KN +R LC+    
Sbjct: 216 LHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHDWAPDVPDSKPEFFKNFMRGLCNANTS 275

Query: 117 ----RHKGVSLPQI-------IPPFL-----------LYAG------------------- 135
               R+   S+P+I        PPF+            +AG                   
Sbjct: 276 EGFRRNIDFSIPEINIPKRKLKPPFMGQNPENRTILAFFAGRAHGYIREVLFSHWKGKDK 335

Query: 136 ----------GNDFED---RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFND 182
                     G ++ +    SKFC+CP G      + V++I+ GCVPV+ISD + LPFND
Sbjct: 336 DVQVYDHLTKGQNYHELIGHSKFCLCPSGYEVASPREVEAIYSGCVPVVISDNYSLPFND 395

Query: 183 ILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFH 242
           +LDW+K S+ I  D +  +  IL+  I   K++  ++N  K ++ F  N P   +    H
Sbjct: 396 VLDWSKFSVEIPVDKIPDIKKILQE-IPHDKYLRMYRNVMKVRRHFVVNRPAQPFD-VIH 453

Query: 243 MVVYELWLRR 252
           M+++ +WLRR
Sbjct: 454 MILHSVWLRR 463

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 122/314 (38%), Gaps = 83/314 (26%)

Query: 16  LKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPV--SC------HKMRGKFYNWLMVTL 67
           L   FA E +  + +  S   T +P +A  F+ PV  +C      H +  K    +   +
Sbjct: 72  LSHMFAAEIFMHRFLLSSAIRTLNPEEADWFYTPVYTTCDLTPWGHPLPFKSPRIMRSAI 131

Query: 68  KLISLILKYPYLNRTQGADHFFVTCYDIGV-------RATE-GFHNLWKNSIRV------ 113
           + IS    +PY NRT GADHFFV  +D G        +A E G   L + +  V      
Sbjct: 132 QFISS--HWPYWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTFGQK 189

Query: 114 --LCSRHKGVSLPQIIPP---------------------FLLYAGGND------------ 138
             +C +   +++P   PP                      L Y   ND            
Sbjct: 190 DHVCLKEGSITIPPYAPPQKMKTHLVPPETPRSIFVYFRGLFYDTANDPEGGYYARGARA 249

Query: 139 ----------------------FED--RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISD 174
                                 +ED  RS FC+CP G      ++V+++  GC+PVII+D
Sbjct: 250 SVWENFKNNPLFDISTDHPPTYYEDMQRSIFCLCPLGWAPWSPRLVEAVVFGCIPVIIAD 309

Query: 175 FHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPP 234
              LPF D + W+++ + + EDDV +L+ IL  I               + KQ      P
Sbjct: 310 DIVLPFADAIPWDEIGVFVAEDDVPKLDTILTSIPMDVILRKQRLLANPSMKQAMLFPQP 369

Query: 235 IKYGTTFHMVVYEL 248
            + G  FH ++  L
Sbjct: 370 AQPGDAFHQILNGL 383

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 113/277 (40%), Gaps = 79/277 (28%)

Query: 11  QTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPV--SCHKMRG----KFYNWLM 64
           + P  L   FA E +  + +  S   T +P +A  F+ PV  +C          F +  M
Sbjct: 85  KDPRCLNHMFAAEIFMHRFLLSSAVRTLNPEQADWFYAPVYTTCDLTHAGLPLPFKSPRM 144

Query: 65  VTLKLISLILKYPYLNRTQGADHFFVTCYDIGV-------RATE-GFHNLWKNSIRV--- 113
           +   +  L  K+P+ NRT GADHFFV  +D G        +A E G   L + +  V   
Sbjct: 145 MRSAIQFLSRKWPFWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTF 204

Query: 114 -----LCSRHKGVSLPQIIPP---------------------FLLYAGGND--------- 138
                +C +   +++P   PP                      L Y  GND         
Sbjct: 205 GQKNHVCLKEGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDNGNDPEGGYYARG 264

Query: 139 -------------------------FED--RSKFCICPGGSLGNFAQIVDSIHCGCVPVI 171
                                    +ED  RS FC+CP G      ++V+++  GC+PVI
Sbjct: 265 ARASLWENFKNNPLFDISTEHPATYYEDMQRSVFCLCPLGWAPWSPRLVEAVVFGCIPVI 324

Query: 172 ISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI 208
           I+D   LPF D + W+++ + + E+DV RL+ IL  I
Sbjct: 325 IADDIVLPFADAIPWDEIGVFVDEEDVPRLDSILTSI 361

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1

 Score = 81.6 bits (200), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 79/314 (25%)

Query: 11  QTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPV------SCHKMRGKFYNWLM 64
           + P  L   FA E Y  + +  S   T +P +A  F++PV      + + +   F +  M
Sbjct: 67  KDPRCLNHMFAAEIYMQRFLLSSPVRTLNPEEADWFYVPVYTTCDLTPNGLPLPFKSPRM 126

Query: 65  VTLKLISLILKYPYLNRTQGADHFFVTCYDIGV--------RATEGFHNLWKNSIRV--- 113
           +   +  +   +PY NRT+GADHFFV  +D G             G   L + +  V   
Sbjct: 127 MRSAIQLIASNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIGRGILPLLQRATLVQTF 186

Query: 114 -----LCSRHKGVSLPQIIPP---------------------FLLYAGGND--------- 138
                +C +   +++P   PP                      L Y  GND         
Sbjct: 187 GQRNHVCLKEGSITVPPYAPPQKMQSHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARG 246

Query: 139 -------------------------FED--RSKFCICPGGSLGNFAQIVDSIHCGCVPVI 171
                                    +ED  R+ FC+CP G      ++V+++  GC+PVI
Sbjct: 247 ARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVIFGCIPVI 306

Query: 172 ISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWN 231
           I+D   LPF D + W  + + + E DV  L+ IL  I  +            + KQ    
Sbjct: 307 IADDIVLPFADAIPWEDIGVFVDEKDVPYLDTILTSIPPEVILRKQRLLANPSMKQAMLF 366

Query: 232 TPPIKYGTTFHMVV 245
             P + G  FH V+
Sbjct: 367 PQPAQPGDAFHQVL 380

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
449431924	412	PREDICTED: probable glycosyltransferase	0.957	0.604	0.511	1e-77
255563758	406	catalytic, putative [Ricinus communis] g	0.957	0.613	0.498	2e-77
356496874	404	PREDICTED: probable glycosyltransferase	0.957	0.616	0.495	4e-77
224071347	326	predicted protein [Populus trichocarpa]	0.957	0.763	0.507	9e-77
224084457	406	predicted protein [Populus trichocarpa]	0.957	0.613	0.501	1e-76
359495862	594	PREDICTED: probable glycosyltransferase	0.957	0.419	0.498	3e-76
296090519	416	unnamed protein product [Vitis vinifera]	0.957	0.598	0.498	4e-76
225464075	417	PREDICTED: probable glycosyltransferase	0.957	0.597	0.504	4e-76
296088784	326	unnamed protein product [Vitis vinifera]	0.957	0.763	0.504	8e-76
357485421	415	Exostosin-like protein [Medicago truncat	0.946	0.592	0.490	2e-75

>gi|449431924|ref|XP_004133750.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus]

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 160/313 (51%), Positives = 196/313 (62%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGK---FYNWL 63
           N+ YQTP KL  K+A EGYFF+ IRESRF T DP +AHLFFIP+SCHKMRGK   + N  
Sbjct: 102 NTFYQTPRKLTGKYASEGYFFQNIRESRFRTEDPDQAHLFFIPISCHKMRGKGTSYENMT 161

Query: 64  MVTLKLIS-LILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++    +  LI KYPY NRT GADHFFVTC+D+GVRA+EG   L KN+IRV+CS      
Sbjct: 162 VIVQNYVEGLISKYPYWNRTLGADHFFVTCHDVGVRASEGLPFLIKNAIRVVCSPSYDVG 221

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFEDR-------------------------------- 142
              HK V+LPQ++ PF L AGGND E+R                                
Sbjct: 222 FIPHKDVALPQVLQPFALPAGGNDTENRTTLGFWAGHRNSKIRVILARVWENDTELDISN 281

Query: 143 ------------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                             +KFCICPGGS  N A+I DSIH GCVPVI+SD++DLPFNDIL
Sbjct: 282 NRISRATGHLLYQKRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSDYYDLPFNDIL 341

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW K S+I++E DV++L  ILK  IS  +FI  HKN  + QK F+WN+PPIKY   FHMV
Sbjct: 342 DWRKFSVIVKERDVYQLKQILKD-ISDIEFIKLHKNLMQVQKHFQWNSPPIKYD-AFHMV 399

Query: 245 VYELWLRRYFLKY 257
           +Y+LWLR + +KY
Sbjct: 400 MYDLWLRHHVIKY 412

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563758|ref|XP_002522880.1| catalytic, putative [Ricinus communis] gi|223537865|gb|EEF39480.1| catalytic, putative [Ricinus communis]

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 198/313 (63%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW---- 62
           N+ YQTP KL  K+A EGYFF+ IRES+F T DP +AHLFFIP+SCHKMRGK  ++    
Sbjct: 96  NTFYQTPRKLTGKYASEGYFFQNIRESKFRTNDPDQAHLFFIPISCHKMRGKGTSYENMT 155

Query: 63  LMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++V   + SL +KYPY NRT GADHFFVTC+D+GVRATEG   L KN+IRV+CS      
Sbjct: 156 IIVQNYVESLAVKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLVKNAIRVVCSPSYDVG 215

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFED--------------------------------- 141
              HK V+LPQ++ PF L AGGND E+                                 
Sbjct: 216 FIPHKDVALPQVLQPFALPAGGNDLENRTTLGFWAGHRNSKIRVILARVWENDTELDISN 275

Query: 142 -----------------RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                            R+KFCICPGGS  N A+I DSIH GCVPVI+SD++DLPFNDIL
Sbjct: 276 NRINRATGHLVYQKRFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSDYYDLPFNDIL 335

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW + S+I++E DV+RL  +LK  IS  +F+  H+N  + QK F+WN+PPIKY   FHMV
Sbjct: 336 DWKRFSVILKEKDVYRLKQVLKD-ISDDEFVALHENLVEVQKHFQWNSPPIKYD-AFHMV 393

Query: 245 VYELWLRRYFLKY 257
           +++LWLR + +KY
Sbjct: 394 MFDLWLRHHVIKY 406

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496874|ref|XP_003517290.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max]

 Score =  293 bits (751), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 155/313 (49%), Positives = 197/313 (62%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW---- 62
           N+ YQTP KL  K+A EGYFF+ IRESRF T +P +AHLFFIP+SCHKMRGK  ++    
Sbjct: 94  NTFYQTPRKLTGKYASEGYFFQNIRESRFCTENPDEAHLFFIPISCHKMRGKGTSYENMT 153

Query: 63  LMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++V   + SLI KYPY NRT GADHFFVTC+D+GVRATEG   L KNSIR +CS      
Sbjct: 154 IIVQNYVESLISKYPYWNRTLGADHFFVTCHDVGVRATEGLEFLVKNSIRAVCSPSYDVG 213

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFED--------------------------------- 141
              HK V+LPQ++ PF L AGGND E+                                 
Sbjct: 214 FIPHKDVALPQVLQPFALPAGGNDIENRTTLGFWAGHRNSKIRVILARVWENDTELDISN 273

Query: 142 -----------------RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                            RSKFCICPGGS  N A+I DSIH GC+PVI+S+++DLPFNDIL
Sbjct: 274 NRISRATGHLVYQKRFYRSKFCICPGGSQVNSARIADSIHYGCIPVILSNYYDLPFNDIL 333

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DWNK +++++E DV++L  ILK  IS  +F+  H N  K QK F+WN+PPI++   FH+V
Sbjct: 334 DWNKFAVVLKESDVYQLKQILKN-ISDAEFVTLHNNLVKVQKHFQWNSPPIRFD-AFHLV 391

Query: 245 VYELWLRRYFLKY 257
           +Y+LWLR + +KY
Sbjct: 392 MYDLWLRHHTIKY 404

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071347|ref|XP_002303415.1| predicted protein [Populus trichocarpa] gi|222840847|gb|EEE78394.1| predicted protein [Populus trichocarpa]

 Score =  292 bits (748), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 159/313 (50%), Positives = 198/313 (63%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW---- 62
           N+ YQTP KL  K+A EGYFF+ IRESRF T DP +AHLFFIP+SCHKMRGK  ++    
Sbjct: 16  NTFYQTPRKLTGKYASEGYFFQNIRESRFRTLDPDQAHLFFIPISCHKMRGKGTSYENMT 75

Query: 63  LMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++V   + SLI KY Y NRT GADHFFVTC+D+GVRATEG   L KN+IRV+CS      
Sbjct: 76  VIVENYVESLIAKYSYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVG 135

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFEDR-------------------------------- 142
              HK V+LPQ++ PF L AGGND E+R                                
Sbjct: 136 FIPHKDVALPQVLQPFALPAGGNDVENRTTLGFWAGHRNSRIRVILARVWENDTELDISS 195

Query: 143 ------------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                             +KFCICPGGS  N A+I DSIH GCVPVI+S+++DLPFNDIL
Sbjct: 196 NRINRATGHLVYQKRFYGTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDIL 255

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW+K S+I++E DV++L  ILK  I   +F++ HKN  K QK F+WN+PPIK    FHMV
Sbjct: 256 DWHKFSVILKEQDVYQLKQILKD-IPDNQFVSLHKNLIKVQKHFQWNSPPIK-NDAFHMV 313

Query: 245 VYELWLRRYFLKY 257
           +Y+LWLRR+ +KY
Sbjct: 314 MYDLWLRRHVIKY 326

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084457|ref|XP_002307304.1| predicted protein [Populus trichocarpa] gi|222856753|gb|EEE94300.1| predicted protein [Populus trichocarpa]

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/313 (50%), Positives = 196/313 (62%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW---- 62
           N+ YQTP KL  K+A EGYFF+ IRESRF T DP +AHLFFIP+SCHKMRGK  ++    
Sbjct: 96  NTFYQTPRKLTGKYASEGYFFQNIRESRFQTQDPDQAHLFFIPISCHKMRGKGISYENMT 155

Query: 63  LMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++V   + SL  KYPY NRT GADHFFVTC+D+GVRATEG   L KN+IRV+CS      
Sbjct: 156 IIVDNYVESLKSKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVG 215

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFEDR-------------------------------- 142
              HK ++LPQ++ PF L AGGND E R                                
Sbjct: 216 FIPHKDIALPQVLQPFALPAGGNDVEKRTTLGFWAGHRNSRIRVILARVWENDTELDISN 275

Query: 143 ------------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                             SK+CICPGGS  N A+I DSIH GC+PVI+S+++DLPFNDIL
Sbjct: 276 NRINRATGHLVYQKRFYGSKYCICPGGSQVNSARIADSIHYGCIPVILSNYYDLPFNDIL 335

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW+K S+I++E DV+RL  ILK  I   K ++ HKN  K QK F+WN+PP+KY   FHMV
Sbjct: 336 DWHKFSVILKEQDVYRLKQILKD-IPDNKLVSLHKNLVKVQKHFQWNSPPVKYD-AFHMV 393

Query: 245 VYELWLRRYFLKY 257
           +Y+LWLR + +KY
Sbjct: 394 MYDLWLRHHVIKY 406

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495862|ref|XP_002266299.2| PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera]

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 194/313 (61%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGK---FYNWL 63
           N+ YQTP KL  K+A EGYFF+ IR+SRF T DP +AHLFFIP+SCHKMRGK   + N  
Sbjct: 284 NTFYQTPRKLTGKYASEGYFFQNIRDSRFRTNDPDQAHLFFIPISCHKMRGKGTSYENMT 343

Query: 64  MVTLKLI-SLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++    + SLI KYPY NRT GADHFFVTC+D+GVRATEG   L KNSIRV+CS      
Sbjct: 344 VIVQNYVGSLISKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLVKNSIRVVCSPSYDVG 403

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFED--------------------------------- 141
              HK V+LPQ++ PF L AGGND E+                                 
Sbjct: 404 FIPHKDVALPQVLQPFALPAGGNDIENRTTLGFWAGHRNSKIRVILARVWENDTELDIMN 463

Query: 142 -----------------RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                            R+KFCICPGGS  N A+I DSIH GCVPVI+S+++DLPFNDIL
Sbjct: 464 NRINRAAGELLYQKRFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDIL 523

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW K S++++E DV++L  ILK  I   +F+  H N  + QK F+WN+PPI+Y   FHM+
Sbjct: 524 DWRKFSVVLKELDVYQLKQILKD-IPDAEFVALHNNLVQVQKHFQWNSPPIRYD-AFHMI 581

Query: 245 VYELWLRRYFLKY 257
           +YELWLR   +KY
Sbjct: 582 MYELWLRHQVIKY 594

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090519|emb|CBI40850.3| unnamed protein product [Vitis vinifera]

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 194/313 (61%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGK---FYNWL 63
           N+ YQTP KL  K+A EGYFF+ IR+SRF T DP +AHLFFIP+SCHKMRGK   + N  
Sbjct: 106 NTFYQTPRKLTGKYASEGYFFQNIRDSRFRTNDPDQAHLFFIPISCHKMRGKGTSYENMT 165

Query: 64  MVTLKLI-SLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++    + SLI KYPY NRT GADHFFVTC+D+GVRATEG   L KNSIRV+CS      
Sbjct: 166 VIVQNYVGSLISKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLVKNSIRVVCSPSYDVG 225

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFED--------------------------------- 141
              HK V+LPQ++ PF L AGGND E+                                 
Sbjct: 226 FIPHKDVALPQVLQPFALPAGGNDIENRTTLGFWAGHRNSKIRVILARVWENDTELDIMN 285

Query: 142 -----------------RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                            R+KFCICPGGS  N A+I DSIH GCVPVI+S+++DLPFNDIL
Sbjct: 286 NRINRAAGELLYQKRFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDIL 345

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW K S++++E DV++L  ILK  I   +F+  H N  + QK F+WN+PPI+Y   FHM+
Sbjct: 346 DWRKFSVVLKELDVYQLKQILKD-IPDAEFVALHNNLVQVQKHFQWNSPPIRYD-AFHMI 403

Query: 245 VYELWLRRYFLKY 257
           +YELWLR   +KY
Sbjct: 404 MYELWLRHQVIKY 416

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464075|ref|XP_002268836.1| PREDICTED: probable glycosyltransferase At5g03795-like [Vitis vinifera]

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/313 (50%), Positives = 194/313 (61%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW---- 62
           N+ YQTP KL  K+A EGYFF+ IR+S+F T DP +AHLFFIP+SCHKMRGK  ++    
Sbjct: 107 NTYYQTPRKLTGKYASEGYFFQNIRQSQFRTDDPDQAHLFFIPISCHKMRGKGTSYENMT 166

Query: 63  LMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++V   + SL+ KYPY NRT GADHFF+TC+D+GVRATEG   L KNSIRV+CS      
Sbjct: 167 IIVQNYVQSLMSKYPYWNRTLGADHFFLTCHDVGVRATEGVPLLVKNSIRVVCSPSYDVG 226

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFED--------------------------------- 141
              HK V+LPQ++ PF L  GG D ++                                 
Sbjct: 227 FIPHKDVALPQVLQPFALPTGGRDIKNRTTLGFWAGHRNSKIRVILARIWENDTELDIKN 286

Query: 142 -----------------RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                            R+KFCICPGGS  N A+I DSIH GCVPVI+SD++DLPFNDIL
Sbjct: 287 NRINRATGHLVYQNKFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSDYYDLPFNDIL 346

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW K S+I++E DV+RL  ILK  I   +FI  H N  K QK F+WNTPPIKY   FHMV
Sbjct: 347 DWRKFSVILKERDVYRLKYILKD-IPDAEFIALHDNLVKVQKHFQWNTPPIKYD-AFHMV 404

Query: 245 VYELWLRRYFLKY 257
           +YELWLR + +KY
Sbjct: 405 MYELWLRHHVIKY 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088784|emb|CBI38234.3| unnamed protein product [Vitis vinifera]

 Score =  289 bits (740), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 158/313 (50%), Positives = 194/313 (61%), Gaps = 64/313 (20%)

Query: 7   NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW---- 62
           N+ YQTP KL  K+A EGYFF+ IR+S+F T DP +AHLFFIP+SCHKMRGK  ++    
Sbjct: 16  NTYYQTPRKLTGKYASEGYFFQNIRQSQFRTDDPDQAHLFFIPISCHKMRGKGTSYENMT 75

Query: 63  LMVTLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS------ 116
           ++V   + SL+ KYPY NRT GADHFF+TC+D+GVRATEG   L KNSIRV+CS      
Sbjct: 76  IIVQNYVQSLMSKYPYWNRTLGADHFFLTCHDVGVRATEGVPLLVKNSIRVVCSPSYDVG 135

Query: 117 --RHKGVSLPQIIPPFLLYAGGNDFED--------------------------------- 141
              HK V+LPQ++ PF L  GG D ++                                 
Sbjct: 136 FIPHKDVALPQVLQPFALPTGGRDIKNRTTLGFWAGHRNSKIRVILARIWENDTELDIKN 195

Query: 142 -----------------RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL 184
                            R+KFCICPGGS  N A+I DSIH GCVPVI+SD++DLPFNDIL
Sbjct: 196 NRINRATGHLVYQNKFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSDYYDLPFNDIL 255

Query: 185 DWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMV 244
           DW K S+I++E DV+RL  ILK  I   +FI  H N  K QK F+WNTPPIKY   FHMV
Sbjct: 256 DWRKFSVILKERDVYRLKYILKD-IPDAEFIALHDNLVKVQKHFQWNTPPIKYD-AFHMV 313

Query: 245 VYELWLRRYFLKY 257
           +YELWLR + +KY
Sbjct: 314 MYELWLRHHVIKY 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485421|ref|XP_003612998.1| Exostosin-like protein [Medicago truncatula] gi|355514333|gb|AES95956.1| Exostosin-like protein [Medicago truncatula]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/310 (49%), Positives = 194/310 (62%), Gaps = 64/310 (20%)

Query: 10  YQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNW----LMV 65
           YQTP KL  K+A EGYFF+ IRESRF T DP +AHLFFIP+SCHKMRGK  ++    ++V
Sbjct: 108 YQTPRKLTGKYASEGYFFQNIRESRFRTLDPDEAHLFFIPISCHKMRGKGTSYENMTIIV 167

Query: 66  TLKLISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS--------R 117
              + SLI KYPY NRT GADHFFVTC+D+GVRATEG   L KNSIR +CS         
Sbjct: 168 QNYVESLISKYPYWNRTLGADHFFVTCHDVGVRATEGLPLLVKNSIRAVCSPSYDVGFIP 227

Query: 118 HKGVSLPQIIPPFLLYAGGNDFEDR----------------------------------- 142
           HK V+LPQ++ PF L AGGND E+R                                   
Sbjct: 228 HKDVALPQVLQPFALPAGGNDVENRTSLGFWAGHRNSKIRVILARVWENDTELDISNNRI 287

Query: 143 ---------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWN 187
                          +KFCICPGGS  N A+I DSIH GC+PVI+S+++DLPFNDILDW 
Sbjct: 288 SRATGHLVYQKRFYSTKFCICPGGSQVNSARIADSIHYGCIPVILSNYYDLPFNDILDWR 347

Query: 188 KLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYE 247
           K +++++E DV++L  ILK   S+ +F+  H N  K QK F+WN+PP++Y   FHMV+Y+
Sbjct: 348 KFAVVLKESDVYQLKQILKN-KSQDEFVALHNNLVKIQKHFQWNSPPVRY-DAFHMVMYD 405

Query: 248 LWLRRYFLKY 257
           LWLR + ++Y
Sbjct: 406 LWLRHHTIQY 415

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
TAIR|locus:2120933	425	AT4G38040 "AT4G38040" [Arabido	0.526	0.322	0.577	7.5e-78
TAIR|locus:1009023450	518	AT5G03795 [Arabidopsis thalian	0.461	0.231	0.352	2.3e-35
TAIR|locus:2091122	470	AT3G07620 "AT3G07620" [Arabido	0.434	0.240	0.339	6.9e-30
TAIR|locus:2145254	654	AT5G25820 "AT5G25820" [Arabido	0.438	0.174	0.370	1.3e-29
TAIR|locus:2125687	593	AT4G32790 "AT4G32790" [Arabido	0.442	0.193	0.324	2.8e-29
TAIR|locus:2145924	500	XGD1 "AT5G33290" [Arabidopsis	0.430	0.224	0.359	4.9e-27
TAIR|locus:2100814	470	AT3G42180 "AT3G42180" [Arabido	0.434	0.240	0.401	7e-27
TAIR|locus:2152632	547	AT5G37000 "AT5G37000" [Arabido	0.411	0.195	0.391	7.8e-22
TAIR|locus:2172676	469	F8H "AT5G22940" [Arabidopsis t	0.480	0.266	0.312	3.3e-17
TAIR|locus:2144231	546	AT5G11610 "AT5G11610" [Arabido	0.426	0.203	0.377	1.2e-16

TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
 Identities = 86/149 (57%), Positives = 105/149 (70%)

Query:     7 NSSYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGK---FYNWL 63
             N+ YQTP K+  K+A EGYFF+ IRESRF T DP +A LFFIP+SCHKMRGK   + N  
Sbjct:   115 NTFYQTPRKVTGKYASEGYFFQNIRESRFRTLDPDEADLFFIPISCHKMRGKGTSYENMT 174

Query:    64 MVTLKLIS-LILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSR----- 117
             ++    +  LI KYPY NRT GADHFFVTC+D+GVRA EG   L KN+IRV+CS      
Sbjct:   175 VIVQNYVDGLIAKYPYWNRTLGADHFFVTCHDVGVRAFEGSPLLIKNTIRVVCSPSYNVG 234

Query:   118 ---HKGVSLPQIIPPFLLYAGGNDFEDRS 143
                HK V+LPQ++ PF L AGGND E+R+
Sbjct:   235 FIPHKDVALPQVLQPFALPAGGNDVENRT 263

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
 Identities = 43/122 (35%), Positives = 75/122 (61%)

Query:   137 NDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIRED 196
             +D    SKFCICP G      +IV++++ GCVPV+I+  +  PF+D+L+W   S+I+  +
Sbjct:   397 SDMMRNSKFCICPSGYEVASPRIVEALYSGCVPVLINSGYVPPFSDVLNWRSFSVIVSVE 456

Query:   197 DVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLK 256
             D+  L  IL  I S  +++  ++   K ++ FE N+P  ++   FHM+++ +W+RR  +K
Sbjct:   457 DIPNLKTILTSI-SPRQYLRMYRRVLKVRRHFEVNSPAKRFDV-FHMILHSIWVRRLNVK 514

Query:   257 YR 258
              R
Sbjct:   515 IR 516

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
 Identities = 39/115 (33%), Positives = 71/115 (61%)

Query:   142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRL 201
             +S+FCICP G      ++ ++I+ GCVPV+IS+ + LPF+D+L+W K S+ +   ++  L
Sbjct:   356 KSRFCICPSGHEVASPRVPEAIYSGCVPVLISENYVLPFSDVLNWEKFSVSVSVKEIPEL 415

Query:   202 NLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLK 256
               IL  I  + +++  ++   K ++    N PP +Y   F+M+++ +WLRR  +K
Sbjct:   416 KRILMDIPEE-RYMRLYEGVKKVKRHILVNDPPKRYDV-FNMIIHSIWLRRLNVK 468

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
 Identities = 43/116 (37%), Positives = 63/116 (54%)

Query:   139 FEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDV 198
             F   SK+CIC  G   N  ++V++I   CVPVIISD    PF ++L+W   ++ I E D+
Sbjct:   537 FMKTSKYCICAKGFEVNSPRVVEAIFYDCVPVIISDNFVPPFFEVLNWESFAIFIPEKDI 596

Query:   199 HRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYF 254
               L  IL  I  + ++ +      K QK F W+  P KY   FHM+++ +W  R F
Sbjct:   597 PNLKKILMSI-PESRYRSMQMRVKKVQKHFLWHAKPEKYDM-FHMILHSIWYNRVF 650

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
 Identities = 38/117 (32%), Positives = 64/117 (54%)

Query:   138 DFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDD 197
             ++   SK+CICP G   N  ++V+++   CVPVIISD    PF ++L+W   ++ + E D
Sbjct:   477 EYMKSSKYCICPKGHEVNSPRVVEALFYECVPVIISDNFVPPFFEVLNWESFAVFVLEKD 536

Query:   198 VHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYF 254
             +  L  IL  I  + ++          QK F W++ P ++   FHM+++ +W  R F
Sbjct:   537 IPDLKNILVSITEE-RYREMQMRVKMVQKHFLWHSKPERFDI-FHMILHSIWYNRVF 591

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
 Identities = 41/114 (35%), Positives = 68/114 (59%)

Query:   143 SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLN 202
             SKFC+CP G      + V++I+ GCVPVIISD + LPF+D+L+W+  S+ I    +  + 
Sbjct:   386 SKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFSIQIPVSRIKEIK 445

Query:   203 LILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLK 256
              IL+ + S  +++  +K   + ++ F  N P   Y    HM+++ +WLRR  L+
Sbjct:   446 TILQSV-SLVRYLKMYKRVLEVKQHFVLNRPAKPYDV-MHMMLHSIWLRRLNLR 497

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0010398 "xylogalacturonan metabolic process" evidence=IMP

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

GO:0045489 "pectin biosynthetic process" evidence=IMP

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
 Identities = 47/117 (40%), Positives = 71/117 (60%)

Query:   143 SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLN 202
             SKFC+CP G      + V++I+ GCVPV+ISD + LPFND+LDW+K S+ I  D +  + 
Sbjct:   356 SKFCLCPSGYEVASPREVEAIYSGCVPVVISDNYSLPFNDVLDWSKFSVEIPVDKIPDIK 415

Query:   203 LILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLRRYFLKYRL 259
              IL+ I    K++  ++N  K ++ F  N P   +    HM+++ +WLRR  L  RL
Sbjct:   416 KILQEI-PHDKYLRMYRNVMKVRRHFVVNRPAQPFDV-IHMILHSVWLRR--LNIRL 468

GO:0003824 "catalytic activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22
 Identities = 47/120 (39%), Positives = 64/120 (53%)

Query:     6 GNSSYQTPWKLKRKFAIEGYFFKKIRESR-FLTTDPAKAHLFFIPVSCHKMRGK----FY 60
             G   + TP   +  +A EG+F K +  ++ F+  DP KAHLF+IP+S   +R      F 
Sbjct:   249 GKPIFHTPMP-RGIYASEGWFMKLMESNKKFVVKDPRKAHLFYIPISIKALRSSLGLDFQ 307

Query:    61 N--WLMVTLK-LISLIL-KYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCS 116
                 L   LK  + LI  KY + NRT GADHF V C+D G + T       KNS+R LC+
Sbjct:   308 TPKSLADHLKEYVDLIAGKYKFWNRTGGADHFLVACHDWGNKLTT---KTMKNSVRSLCN 364

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2172676 F8H "AT5G22940" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
 Identities = 41/131 (31%), Positives = 67/131 (51%)

Query:   133 YAGGNDFEDRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMI 192
             +AG      RS FC+CP G      ++V+S   GCVPV+I+D   LPF++ + W ++S+ 
Sbjct:   332 FAGYRSEIVRSVFCLCPLGWAPWSPRLVESAVLGCVPVVIADGIQLPFSETVQWPEISLT 391

Query:   193 IREDDVHRLNLILKGIISKGKFI---NSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELW 249
             + E DV  L  +L+ + +        N H+  FK  +   +N P  +   T+H ++  LW
Sbjct:   392 VAEKDVRNLRKVLEHVAATNLSAIQRNLHEPVFK--RALLYNVPMKEGDATWH-ILESLW 448

Query:   250 LRRYFLKYRLS 260
              +     YR S
Sbjct:   449 RKLDDRSYRRS 459

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IGI

TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 43/114 (37%), Positives = 66/114 (57%)

Query:   142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRL 201
             RS+FC+C  G   N  ++V+SI  GCVPVIISD    PF +IL+W   ++ + E ++  L
Sbjct:   432 RSRFCVCAKGYEVNSPRVVESILYGCVPVIISDNFVPPFLEILNWESFAVFVPEKEIPNL 491

Query:   202 NLILKGIISKGKFINSHKNTFKAQKQFEWNT-PPIKYGTTFHMVVYELWLRRYF 254
               IL  I  + +++   K   K QK F W+   P++Y   FHM+++ +W  R F
Sbjct:   492 RKILISIPVR-RYVEMQKRVLKVQKHFMWHDGEPVRYDI-FHMILHSVWYNRVF 543

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	260
pfam03016	292	pfam03016, Exostosin, Exostosin family	2e-33

>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family

 Score =  122 bits (308), Expect = 2e-33
 Identities = 69/268 (25%), Positives = 101/268 (37%), Gaps = 72/268 (26%)

Query: 12  TPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPV--SCHKMRGKFYNWLMVTLKL 69
           T W L  ++A E    K I  SR  T DP +A LFF+P   S           L+ +  L
Sbjct: 26  TSWYLTHQYAAESILHKSILNSRCRTLDPDEADLFFVPFYTSLSVGTNAVERDLLPSE-L 84

Query: 70  ISLILKYPYLNRTQGADHFFVTCYDIGVRATEGFHNLWKNSIRVLCSR----------HK 119
           +  +   PY NR+ G DH  V  +  G  A +    L  N+I  + +             
Sbjct: 85  VEWLESLPYWNRSGGRDHIIVNSHPFGGSAFDRLPALNNNTILAVLAGGGFSEDQFRPGF 144

Query: 120 GVSLPQIIP-----------------PFLLY-AGGNDFEDR------------------- 142
            V LP                       LL+ AGG     +                   
Sbjct: 145 DVPLPAYFHPNSVDDLESDGMPPSKRKTLLFFAGGPRPAGKGALANAIRDLLIEECKNSP 204

Query: 143 ----------------------SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPF 180
                                 S+FC+ P G      ++ D++  GC+PVIISD  +LPF
Sbjct: 205 DFQCEGNQSCGNPENYMELLRSSRFCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPF 264

Query: 181 NDILDWNKLSMIIREDDVHRLNLILKGI 208
            D++DW+K S+ + E+D+  L  IL+ I
Sbjct: 265 EDVIDWSKFSVRVPENDIPSLPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	260
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	100.0
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	100.0
KOG2264	907	consensus Exostosin EXT1L [Signal transduction mec	99.86
KOG1022	691	consensus Acetylglucosaminyltransferase EXT2/exost	99.65
cd03814	364	GT1_like_2 This family is most closely related to	96.63
cd03820	348	GT1_amsD_like This family is most closely related	96.49
cd03801	374	GT1_YqgM_like This family is most closely related	96.46
cd03822	366	GT1_ecORF704_like This family is most closely rela	96.32
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	96.26
cd03809	365	GT1_mtfB_like This family is most closely related	95.69
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	95.58
cd03808	359	GT1_cap1E_like This family is most closely related	95.51
cd03794	394	GT1_wbuB_like This family is most closely related	95.43
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	95.39
cd03819	355	GT1_WavL_like This family is most closely related	95.36
cd04962	371	GT1_like_5 This family is most closely related to	95.31
cd03800	398	GT1_Sucrose_synthase This family is most closely r	95.23
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	95.13
cd03818	396	GT1_ExpC_like This family is most closely related	95.05
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	95.01
cd03821	375	GT1_Bme6_like This family is most closely related	94.93
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	94.86
cd03823	359	GT1_ExpE7_like This family is most closely related	94.73
cd03798	377	GT1_wlbH_like This family is most closely related	94.6
cd03807	365	GT1_WbnK_like This family is most closely related	94.57
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	94.57
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	94.46
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	94.41
cd03817	374	GT1_UGDG_like This family is most closely related	94.15
cd03825	365	GT1_wcfI_like This family is most closely related	93.89
cd04949	372	GT1_gtfA_like This family is most closely related	93.73
cd04951	360	GT1_WbdM_like This family is most closely related	93.66
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	93.25
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	93.18
cd03805	392	GT1_ALG2_like This family is most closely related	93.03
cd03804	351	GT1_wbaZ_like This family is most closely related	92.73
PRK10307	412	putative glycosyl transferase; Provisional	92.28
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	92.04
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	91.94
PF00852	349	Glyco_transf_10: Glycosyltransferase family 10 (fu	90.99
cd03806	419	GT1_ALG11_like This family is most closely related	90.88
cd04946	407	GT1_AmsK_like This family is most closely related	90.82
cd03811	353	GT1_WabH_like This family is most closely related	90.19
cd03802	335	GT1_AviGT4_like This family is most closely relate	90.1
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	90.09
PHA01633	335	putative glycosyl transferase group 1	90.06
PRK14099	485	glycogen synthase; Provisional	89.52
cd04955	363	GT1_like_6 This family is most closely related to	89.45
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	88.63
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	88.52
cd03813	475	GT1_like_3 This family is most closely related to	88.22
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	87.64
PHA01630	331	putative group 1 glycosyl transferase	87.31
cd03812	358	GT1_CapH_like This family is most closely related	87.1
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	86.7
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	86.68
PLN02949	463	transferase, transferring glycosyl groups	86.24
cd03796	398	GT1_PIG-A_like This family is most closely related	85.96
PRK14098	489	glycogen synthase; Provisional	85.76
PRK00654	466	glgA glycogen synthase; Provisional	85.73
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	83.23
cd03795	357	GT1_like_4 This family is most closely related to	82.97
cd03816	415	GT1_ALG1_like This family is most closely related	81.94

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=100.00  E-value=5.8e-53  Score=406.41  Aligned_cols=254  Identities=31%  Similarity=0.558  Sum_probs=214.4

Q ss_pred             CCCCCCcccCCCCCCCCcchhHHHHHHHHh--cCCcccCCcCCcceEEEecccccccCCC--CC--------HHHHHHHH
Q 038978            2 RKWRGNSSYQTPWKLKRKFAIEGYFFKKIR--ESRFLTTDPAKAHLFFIPVSCHKMRGKF--YN--------WLMVTLKL   69 (260)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~y~~E~~f~~~l~--~s~~~T~dP~eA~lF~vP~~~~~~~~~~--~~--------~~~l~~~~   69 (260)
                      .+|++++++.++|+.++||++|.+||++++  .++|||.||+|||+||||||+++...+.  ..        .+.+++++
T Consensus       121 ~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  200 (464)
T KOG1021|consen  121 HEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYI  200 (464)
T ss_pred             cCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHH
Confidence            356789999999999999999999999995  7899999999999999999999977431  11        23457788


Q ss_pred             HHHHhcCccccCCCCCCeeeecccCCCCcccc--------chhhhhhcceeeee-cCC-CceecCCCCC-----------
Q 038978           70 ISLILKYPYLNRTQGADHFFVTCYDIGVRATE--------GFHNLWKNSIRVLC-SRH-KGVSLPQIIP-----------  128 (260)
Q Consensus        70 ~~l~~~~PyWnR~~G~DH~~~~~~d~g~~~~~--------~~~~~~~~si~~~~-~~~-kDv~iP~~~~-----------  128 (260)
                      ..++++||||||++|+|||++++|+|+.....        .++++.+++..... ... +||+||++..           
T Consensus       201 ~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~  280 (464)
T KOG1021|consen  201 VALLSKQPYWNRSSGRDHFFVACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSW  280 (464)
T ss_pred             HHHHhcCchhhccCCCceEEEeCCcchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCcccccc
Confidence            77889999999999999999999999976432        12233332222222 235 9999999841           


Q ss_pred             ----------CccccCCC-CCC--C------------------------------------CCceEEeecCCCCCCchhH
Q 038978          129 ----------PFLLYAGG-NDF--E------------------------------------DRSKFCICPGGSLGNFAQI  159 (260)
Q Consensus       129 ----------~l~~f~gg-~~~--~------------------------------------~~S~FCl~p~G~~~~s~rl  159 (260)
                                .|++|+|+ ...  +                                    .+|+|||||+|++++|.|+
T Consensus       281 ~~~~~~~~R~~L~~F~G~~~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~  360 (464)
T KOG1021|consen  281 QGGVPFSNRPILAFFAGAPAGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRL  360 (464)
T ss_pred             ccCCCCCCCceEEEEeccccCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhH
Confidence                      25678876 210  0                                    0999999999999999999


Q ss_pred             HHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHH-HHHHhcCCChHHHHHHHHHHHh-hhccceecC--CCC
Q 038978          160 VDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRL-NLILKGIISKGKFINSHKNTFK-AQKQFEWNT--PPI  235 (260)
Q Consensus       160 ~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l-~~~L~~i~~~~~~~~mr~~l~~-~~~~~~y~~--~~~  235 (260)
                      ||||.+|||||||+|++.+||++++||++|||+|++++++++ .++|.++ +.+++.+||+++.+ +.++|.++.  +.+
T Consensus       361 fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i-~~~~~~~m~~~v~~~v~r~~~~~~~~~~~  439 (464)
T KOG1021|consen  361 FDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSI-PEEEVLRMRENVIRLVPRHFLKKPPGPPK  439 (464)
T ss_pred             HHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhHHHHHHHhc-CHHHHHHHHHHHHHHHHhhEEeCCCCCCC
Confidence            999999999999999999999999999999999999999998 9999999 99999999999995 999999998  888


Q ss_pred             CccHHHHHHHHHHHHHHhhccc
Q 038978          236 KYGTTFHMVVYELWLRRYFLKY  257 (260)
Q Consensus       236 ~~D~af~~~~~~l~~R~~~~~~  257 (260)
                      .+| ||+++++++|+|+++.+.
T Consensus       440 ~~d-a~~~~~~~v~~r~~~~~~  460 (464)
T KOG1021|consen  440 RGD-AFHMILHSLWRRLHKLRS  460 (464)
T ss_pred             cch-hHHHHHhhhhhccccccc
Confidence            899 999999999999998763

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=100.00  E-value=1.8e-48  Score=352.01  Aligned_cols=200  Identities=35%  Similarity=0.610  Sum_probs=164.9

Q ss_pred             ccCCCCCCCCcchhHHHHHHHHhcCCcccCCcCCcceEEEeccccccc----CCC-C--CHHHHHHHHHHHHhcCccccC
Q 038978            9 SYQTPWKLKRKFAIEGYFFKKIRESRFLTTDPAKAHLFFIPVSCHKMR----GKF-Y--NWLMVTLKLISLILKYPYLNR   81 (260)
Q Consensus         9 ~~~~~~~~~~~y~~E~~f~~~l~~s~~~T~dP~eA~lF~vP~~~~~~~----~~~-~--~~~~l~~~~~~l~~~~PyWnR   81 (260)
                      ..+..++.+++|++|.+|++.|++|+++|.||+|||+||||+++++..    +.. .  ..+.+.+++..+++++|||||
T Consensus        26 ~~~~~~~~~~~~~~e~~l~~~l~~s~~~T~dp~eAdlF~vP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r  105 (302)
T PF03016_consen   26 DEQCSWYETSQYALEVILHEALLNSPFRTDDPEEADLFFVPFYSSCYFHHWWGSPNSGADRDSLSDALRHLLASYPYWNR  105 (302)
T ss_pred             cccCCCcccccchHHHHHHHHHHhCCcEeCCHHHCeEEEEEcccccccccccCCccchhhHHHHHHHHHHHHhcCchhhc
Confidence            356778899999999999999999999999999999999999999882    111 1  123457788888999999999


Q ss_pred             CCCCCeeeecccCCCCccccchhhhhhcceeee---------ec-CCCceecCCCCC-------------------Cccc
Q 038978           82 TQGADHFFVTCYDIGVRATEGFHNLWKNSIRVL---------CS-RHKGVSLPQIIP-------------------PFLL  132 (260)
Q Consensus        82 ~~G~DH~~~~~~d~g~~~~~~~~~~~~~si~~~---------~~-~~kDv~iP~~~~-------------------~l~~  132 (260)
                      ++|+||||++++|+|.+.......+.++++.+.         |+ +++||++|+...                   .+++
T Consensus       106 ~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~  185 (302)
T PF03016_consen  106 SGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLF  185 (302)
T ss_pred             cCCCCeEEEeccccccccccccHhhhccchhheeccCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEE
Confidence            999999999999988876554445555544433         22 399999998752                   1234


Q ss_pred             cCCCCCC---------C--------------------------------CCceEEeecCCCCCCchhHHHHHhhCceeEE
Q 038978          133 YAGGNDF---------E--------------------------------DRSKFCICPGGSLGNFAQIVDSIHCGCVPVI  171 (260)
Q Consensus       133 f~gg~~~---------~--------------------------------~~S~FCl~p~G~~~~s~rl~dal~~GCIPVi  171 (260)
                      |+|+...         +                                .+|+|||+|+|+++++.||+|||.+||||||
T Consensus       186 f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVi  265 (302)
T PF03016_consen  186 FAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCSDGSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVI  265 (302)
T ss_pred             EeeeccccccccchhhhhHHHHhcccCCcceeeecccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEE
Confidence            4442100         0                                0899999999999999999999999999999


Q ss_pred             eeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          172 ISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       172 i~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      |+|++.|||+++|||++|||+|+++++++|+++|++|
T Consensus       266 i~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i  302 (302)
T PF03016_consen  266 ISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILRSI  302 (302)
T ss_pred             ecCcccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999986

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]

Probab=99.86  E-value=1e-21  Score=187.51  Aligned_cols=212  Identities=16%  Similarity=0.315  Sum_probs=149.0

Q ss_pred             HHHHHhcCCcccCCcCCcceEEEecccccccCC-CCCHHHHHHHHHHHHhcCccccCCCCCCeeeecccCCC--Cc----
Q 038978           26 FFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGK-FYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDIG--VR----   98 (260)
Q Consensus        26 f~~~l~~s~~~T~dP~eA~lF~vP~~~~~~~~~-~~~~~~l~~~~~~l~~~~PyWnR~~G~DH~~~~~~d~g--~~----   98 (260)
                      |.+.+.+.-|.|+||+.||++++-+-.  +... ......|.    . +-..|||.. +|+||++++...-.  .+    
T Consensus       220 fq~t~~~n~~~ve~pd~ACiyi~lvge--~q~P~~l~p~ele----k-lyslp~w~~-dg~Nhvl~Nl~r~s~~~n~lyn  291 (907)
T KOG2264|consen  220 FQETIPNNVYLVETPDKACIYIHLVGE--IQSPVVLTPAELE----K-LYSLPHWRT-DGFNHVLFNLGRPSDTQNLLYN  291 (907)
T ss_pred             HHHhcccceeEeeCCCccEEEEEEecc--ccCCCcCChHhhh----h-hhcCccccC-CCcceEEEEccCccccccceeE
Confidence            445555778999999999999986543  2222 12233332    2 347899965 89999999864321  00    


Q ss_pred             cccchhhhhhcceeeeec-CCCceecCCCCC-----------C--------ccccCCC--------------------CC
Q 038978           99 ATEGFHNLWKNSIRVLCS-RHKGVSLPQIIP-----------P--------FLLYAGG--------------------ND  138 (260)
Q Consensus        99 ~~~~~~~~~~~si~~~~~-~~kDv~iP~~~~-----------~--------l~~f~gg--------------------~~  138 (260)
                      ...+.++..+.++-.... +|+|+++|+..+           +        +.++.|.                    ..
T Consensus       292 ~~t~raivvQssf~~~q~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp  371 (907)
T KOG2264|consen  292 FQTGRAIVVQSSFYTVQIRPGFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSADP  371 (907)
T ss_pred             eccCceEEEeecceeeeeccCCCcccCcccccccCccceecCcccchhhheeEEEEeeecccccccchhhhhHHHhccCC
Confidence            011222333444333333 499999997652           1        1222220                    00


Q ss_pred             CC-----------------------------------------CCceEEee-cCCCCC-----CchhHHHHHhhCceeEE
Q 038978          139 FE-----------------------------------------DRSKFCIC-PGGSLG-----NFAQIVDSIHCGCVPVI  171 (260)
Q Consensus       139 ~~-----------------------------------------~~S~FCl~-p~G~~~-----~s~rl~dal~~GCIPVi  171 (260)
                      .+                                         +.|||||+ |+|++-     ...|+++|++.||||||
T Consensus       372 ~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPvi  451 (907)
T KOG2264|consen  372 SRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVI  451 (907)
T ss_pred             cccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEE
Confidence            00                                         09999986 778753     24799999999999999


Q ss_pred             eeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCCChHHHHHHHHHHHhhhccceecCCCCCccHHHHHHHHHHHHH
Q 038978          172 ISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNTFKAQKQFEWNTPPIKYGTTFHMVVYELWLR  251 (260)
Q Consensus       172 i~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~~mr~~l~~~~~~~~y~~~~~~~D~af~~~~~~l~~R  251 (260)
                      +++...|||+|.|||++.++++|.+.+.+++-+|+++ .+.++.+||++++-.|..+.     ..-|..+++++..|+.|
T Consensus       452 Lg~~~~LPyqd~idWrraal~lPkaR~tE~HFllrs~-~dsDll~mRRqGRl~wEtYl-----s~~~~~~~tvlA~lR~r  525 (907)
T KOG2264|consen  452 LGNSQLLPYQDLIDWRRAALRLPKARLTEAHFLLRSF-EDSDLLEMRRQGRLFWETYL-----SDRHLLARTVLAALRYR  525 (907)
T ss_pred             eccccccchHHHHHHHHHhhhCCccccchHHHHHHhc-chhhHHHHHhhhhhhHHHHh-----hHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999 99999999999976665532     34455888899888854

>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.65  E-value=6.2e-16  Score=147.46  Aligned_cols=197  Identities=18%  Similarity=0.170  Sum_probs=139.9

Q ss_pred             CCcchhHHH-HHHHHhcCCcccCCcCCcceEEEecccccccCCCCCHHHHHHHHHHHHhcCccccCCCCCCeeeecccCC
Q 038978           17 KRKFAIEGY-FFKKIRESRFLTTDPAKAHLFFIPVSCHKMRGKFYNWLMVTLKLISLILKYPYLNRTQGADHFFVTCYDI   95 (260)
Q Consensus        17 ~~~y~~E~~-f~~~l~~s~~~T~dP~eA~lF~vP~~~~~~~~~~~~~~~l~~~~~~l~~~~PyWnR~~G~DH~~~~~~d~   95 (260)
                      ....+.|.. +.+....|.++|.|+.+||+|.....  .++++.++. ++   -...+.+.-.|.|  |.||..++.-..
T Consensus       118 ~~T~s~ey~~lleA~~~S~yyt~n~N~aclf~Ps~d--~lnQn~l~~-kl---~~~ala~l~~wdr--g~nH~~fnmLpG  189 (691)
T KOG1022|consen  118 GATWSPEYIALLEAWHLSFYYTFNYNGACLFMPSSD--ELNQNPLSW-KL---EKVALAKLLVWDR--GVNHEGFNMLPG  189 (691)
T ss_pred             cccccHHHHHHHHHHHhccceecCCCceEEEecchh--hhccCcchH-HH---HHHHHhcccchhc--ccceeeEeeccC
Confidence            344555544 77888899999999999999975332  244333331 22   2223456669999  999999987555


Q ss_pred             CCccccchhhhhhcceee------ee--cCCCceecCCCCCCcc----c------cCC-------CCCCC----------
Q 038978           96 GVRATEGFHNLWKNSIRV------LC--SRHKGVSLPQIIPPFL----L------YAG-------GNDFE----------  140 (260)
Q Consensus        96 g~~~~~~~~~~~~~si~~------~~--~~~kDv~iP~~~~~l~----~------f~g-------g~~~~----------  140 (260)
                      |.....+..+..+--+..      ++  ..|+||.+|...+-..    .      +.+       |++.+          
T Consensus       190 g~p~yntaldv~~d~a~~~gggf~tW~yr~g~dv~ipv~Sp~~v~~~~~~~g~r~~~l~~~q~n~~pr~r~~l~el~~kh  269 (691)
T KOG1022|consen  190 GDPTYNTALDVGQDEAWYSGGGFGTWKYRKGNDVYIPVRSPGNVGRAFLYDGSRYRVLQDCQENYGPRIRVSLIELLSKH  269 (691)
T ss_pred             CCCCccccccCCcceeEEecCCcCcccccCCCccccccccccccCccccCCccceeeeeccccccchHhHHhHHHHHhhc
Confidence            543212211222111111      22  2399999998773110    0      000       11100          


Q ss_pred             ---------------------------------CCceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCC
Q 038978          141 ---------------------------------DRSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWN  187 (260)
Q Consensus       141 ---------------------------------~~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~  187 (260)
                                                       +..+||+.-++.+.+..-+.+-+.+||+|||..|.+.+||++++||.
T Consensus       270 ~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~  349 (691)
T KOG1022|consen  270 EERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWI  349 (691)
T ss_pred             cceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhce
Confidence                                             17899999999988899999999999999999999999999999999


Q ss_pred             ceEEEEccccHhHHHHHHhcCCChHHHHHHHHHHH
Q 038978          188 KLSMIIREDDVHRLNLILKGIISKGKFINSHKNTF  222 (260)
Q Consensus       188 ~fsv~i~~~~~~~l~~~L~~i~~~~~~~~mr~~l~  222 (260)
                      ..||+++|..+..+.+.|+++ +...+-+||.+..
T Consensus       350 ~aSv~~~e~~~~~v~~~l~~i-~~~~i~sl~~r~~  383 (691)
T KOG1022|consen  350 VASVWCMEYYAGKVMDALLNI-ETAGICSLQLRRI  383 (691)
T ss_pred             eeeEEeehhhHHHHHHHhhcc-hhcchhhhhhhhh
Confidence            999999999999999999999 9999999887764

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.63  E-value=0.0051  Score=54.96  Aligned_cols=87  Identities=11%  Similarity=0.197  Sum_probs=63.6

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .|..|+.|.........++|||.+|| |||.++.-.  ..+++.=....+.++..+..++.+.+..+. .++...+|.++
T Consensus       266 ~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~  342 (364)
T cd03814         266 SADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAAR  342 (364)
T ss_pred             hCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            88999999887666788999999999 788777432  334444445667777777776666666653 57788889888


Q ss_pred             HHhhhccceec
Q 038978          221 TFKAQKQFEWN  231 (260)
Q Consensus       221 l~~~~~~~~y~  231 (260)
                      ..+..+.+.|.
T Consensus       343 ~~~~~~~~~~~  353 (364)
T cd03814         343 ARAEAERRSWE  353 (364)
T ss_pred             HHHHHhhcCHH
Confidence            88776666654

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.49  E-value=0.0072  Score=52.99  Aligned_cols=88  Identities=15%  Similarity=0.166  Sum_probs=62.9

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-CChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-ISKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~~~~~~mr~~  220 (260)
                      ++.+++.|.........++||+.+||- ||.++....+ +++++-....+.++..++.++.+.+..+ ..++...+|.++
T Consensus       252 ~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~  329 (348)
T cd03820         252 KASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN  329 (348)
T ss_pred             hCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            788888887665556889999999985 5555532222 2334444567778888887777777766 367888899998


Q ss_pred             HHhhhccceec
Q 038978          221 TFKAQKQFEWN  231 (260)
Q Consensus       221 l~~~~~~~~y~  231 (260)
                      .++..+.|.|.
T Consensus       330 ~~~~~~~~~~~  340 (348)
T cd03820         330 ARESAERFSIE  340 (348)
T ss_pred             HHHHHHHhCHH
Confidence            88888777664

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=96.46  E-value=0.0077  Score=52.86  Aligned_cols=87  Identities=13%  Similarity=0.219  Sum_probs=64.0

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-CChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-ISKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~~~~~~mr~~  220 (260)
                      .|.+.++|.-.+..+..++||+.+|| |||.++.  -.+.+.+.-....+.++..+..++.+.|..+ ..++...+|.++
T Consensus       275 ~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~  351 (374)
T cd03801         275 AADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEA  351 (374)
T ss_pred             hcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHH
Confidence            78888888766666788999999997 6777765  3355666657778888888888887777775 256677888888


Q ss_pred             HH-hhhccceec
Q 038978          221 TF-KAQKQFEWN  231 (260)
Q Consensus       221 l~-~~~~~~~y~  231 (260)
                      .+ .+.+.+.|+
T Consensus       352 ~~~~~~~~~~~~  363 (374)
T cd03801         352 ARERVAERFSWD  363 (374)
T ss_pred             HHHHHHHhcCHH
Confidence            77 456665554

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.32  E-value=0.01  Score=53.19  Aligned_cols=86  Identities=14%  Similarity=0.231  Sum_probs=63.0

Q ss_pred             CceEEeecCCCC--CCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHH
Q 038978          142 RSKFCICPGGSL--GNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSH  218 (260)
Q Consensus       142 ~S~FCl~p~G~~--~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr  218 (260)
                      .+.+++.|....  ..+..+.||+.+|| |||.++.-.  .+.+.+ ....+.++..+..++.+.|..+. .++...+|+
T Consensus       267 ~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~-~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~  342 (366)
T cd03822         267 AADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLD-GGTGLLVPPGDPAALAEAIRRLLADPELAQALR  342 (366)
T ss_pred             hcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeee-CCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHH
Confidence            788888888766  66788999999999 999887432  333333 34456677777877777777663 457888899


Q ss_pred             HHHHhhhccceec
Q 038978          219 KNTFKAQKQFEWN  231 (260)
Q Consensus       219 ~~l~~~~~~~~y~  231 (260)
                      ++.++..+.+.|+
T Consensus       343 ~~~~~~~~~~s~~  355 (366)
T cd03822         343 ARAREYARAMSWE  355 (366)
T ss_pred             HHHHHHHhhCCHH
Confidence            9888877766665

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.26  E-value=0.0045  Score=50.62  Aligned_cols=78  Identities=22%  Similarity=0.359  Sum_probs=49.2

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .|.+.++|......+..+.||+.+|| |||+++.  -.+.+++.=..-.+.++..++.++.+.+..+. .++....|.++
T Consensus        92 ~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~--~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l~~~  168 (172)
T PF00534_consen   92 SSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDI--GGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDPELRQKLGKN  168 (172)
T ss_dssp             HTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESS--THHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceecccccccccccccccccccccc-ceeeccc--cCCceeeccccceEEeCCCCHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            57888898887778899999999999 6667762  12223332223446677778888887777772 33445555555


Q ss_pred             HH
Q 038978          221 TF  222 (260)
Q Consensus       221 l~  222 (260)
                      .+
T Consensus       169 ~~  170 (172)
T PF00534_consen  169 AR  170 (172)
T ss_dssp             HH
T ss_pred             hc
Confidence            43

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.69  E-value=0.026  Score=50.49  Aligned_cols=85  Identities=15%  Similarity=0.307  Sum_probs=61.0

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-CChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-ISKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~~~~~~mr~~  220 (260)
                      .+.+++.|.-....+..++||+.+|| |||.++.-  ...+++  .+..+.++..+..++.+.|..+ ..++...+|.++
T Consensus       272 ~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~--~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  346 (365)
T cd03809         272 GARAFVFPSLYEGFGLPVLEAMACGT-PVIASNIS--SLPEVA--GDAALYFDPLDPEALAAAIERLLEDPALREELRER  346 (365)
T ss_pred             hhhhhcccchhccCCCCHHHHhcCCC-cEEecCCC--Ccccee--cCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            77888888654444677999999997 77777642  233444  3456677777888888777774 367788888888


Q ss_pred             HHhhhccceec
Q 038978          221 TFKAQKQFEWN  231 (260)
Q Consensus       221 l~~~~~~~~y~  231 (260)
                      .+++.+.+.|+
T Consensus       347 ~~~~~~~~sw~  357 (365)
T cd03809         347 GLARAKRFSWE  357 (365)
T ss_pred             HHHHHHhCCHH
Confidence            88877887775

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=95.58  E-value=0.03  Score=53.97  Aligned_cols=89  Identities=15%  Similarity=0.209  Sum_probs=67.3

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCC---CceEEEEccccHhHHHHHHhcCC-ChHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDW---NKLSMIIREDDVHRLNLILKGII-SKGKFINS  217 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw---~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~m  217 (260)
                      .+..++.|...+....-++|||.+| +|||.++.-  ...++++-   .+..+.++..|...+.+.+..+. .++...+|
T Consensus       331 ~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~g--g~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~  407 (465)
T PLN02871        331 SGDVFVMPSESETLGFVVLEAMASG-VPVVAARAG--GIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERM  407 (465)
T ss_pred             HCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCC--CcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence            7788888887666678899999999 899988743  23444443   67777888888888887777663 56778889


Q ss_pred             HHHHHhhhccceecCC
Q 038978          218 HKNTFKAQKQFEWNTP  233 (260)
Q Consensus       218 r~~l~~~~~~~~y~~~  233 (260)
                      .++.++..+.|.|...
T Consensus       408 ~~~a~~~~~~fsw~~~  423 (465)
T PLN02871        408 GAAAREEVEKWDWRAA  423 (465)
T ss_pred             HHHHHHHHHhCCHHHH
Confidence            9998887777777654

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.51  E-value=0.042  Score=48.31  Aligned_cols=86  Identities=14%  Similarity=0.177  Sum_probs=59.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+.+++.|.........++||+.+|| |||.++.-.  ..+.+.=....+.++..+...+.+.+..+. .++...+|.++
T Consensus       263 ~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~--~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  339 (359)
T cd03808         263 AADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPG--CREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQA  339 (359)
T ss_pred             hccEEEecCcccCcchHHHHHHHcCC-CEEEecCCC--chhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            78888888776666788999999996 778776432  234443345566777777777777766642 56777777777


Q ss_pred             HHhh-hcccee
Q 038978          221 TFKA-QKQFEW  230 (260)
Q Consensus       221 l~~~-~~~~~y  230 (260)
                      .++. .++|.+
T Consensus       340 ~~~~~~~~~s~  350 (359)
T cd03808         340 ARKRAEEEFDE  350 (359)
T ss_pred             HHHHHHHhcCH
Confidence            6664 555544

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.43  E-value=0.039  Score=49.13  Aligned_cols=87  Identities=10%  Similarity=0.147  Sum_probs=58.9

Q ss_pred             CceEEeecCCCCCC-----chhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHH
Q 038978          142 RSKFCICPGGSLGN-----FAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFI  215 (260)
Q Consensus       142 ~S~FCl~p~G~~~~-----s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~  215 (260)
                      .+.++++|...+..     ...++||+.+|| |||.++.-..  .+.+.=....+.++..+..++.+.|..+. .+++..
T Consensus       294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~  370 (394)
T cd03794         294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES--AELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA  370 (394)
T ss_pred             hhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc--hhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence            78888888765532     556899999997 7888764322  22222225566777777777777776663 677788


Q ss_pred             HHHHHHHhhhc-cceec
Q 038978          216 NSHKNTFKAQK-QFEWN  231 (260)
Q Consensus       216 ~mr~~l~~~~~-~~~y~  231 (260)
                      +|.++.++..+ +|.|.
T Consensus       371 ~~~~~~~~~~~~~~s~~  387 (394)
T cd03794         371 EMGENGRRYVEEKFSRE  387 (394)
T ss_pred             HHHHHHHHHHHHhhcHH
Confidence            88888776554 66654

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=95.39  E-value=0.046  Score=50.97  Aligned_cols=89  Identities=11%  Similarity=0.178  Sum_probs=61.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..++.|.-......-+.|||.+|| |||.++.-  ...+++.=....+.++..|...+.+.+..+. .++...+|.++
T Consensus       302 ~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~  378 (405)
T TIGR03449       302 AADVVAVPSYNESFGLVAMEAQACGT-PVVAARVG--GLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAA  378 (405)
T ss_pred             hCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCC--CcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            67777777654445578999999996 88887742  2234454345566778788877776665552 55677889888


Q ss_pred             HHhhhccceecCC
Q 038978          221 TFKAQKQFEWNTP  233 (260)
Q Consensus       221 l~~~~~~~~y~~~  233 (260)
                      .++..+.|.|...
T Consensus       379 ~~~~~~~fsw~~~  391 (405)
T TIGR03449       379 AVEHAAGFSWAAT  391 (405)
T ss_pred             HHHHHHhCCHHHH
Confidence            8887777777643

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.36  E-value=0.047  Score=49.21  Aligned_cols=87  Identities=13%  Similarity=0.096  Sum_probs=60.1

Q ss_pred             CceEEeecC-CCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHh-cCC-ChHHHHHHH
Q 038978          142 RSKFCICPG-GSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILK-GII-SKGKFINSH  218 (260)
Q Consensus       142 ~S~FCl~p~-G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~-~i~-~~~~~~~mr  218 (260)
                      .|..+++|. -......-++||+.+|| |||.++.  -+..+++.-....+.++..+...+.+.+. .+. ++++..+|.
T Consensus       263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~  339 (355)
T cd03819         263 LADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMF  339 (355)
T ss_pred             hCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHH
Confidence            677778876 33334578999999999 7887763  34456666565677788888888777763 321 677888888


Q ss_pred             HHHHhhh-ccceec
Q 038978          219 KNTFKAQ-KQFEWN  231 (260)
Q Consensus       219 ~~l~~~~-~~~~y~  231 (260)
                      ++.++.. .+|.|.
T Consensus       340 ~~a~~~~~~~f~~~  353 (355)
T cd03819         340 AKARMCVETLFSYD  353 (355)
T ss_pred             HHHHHHHHHhhhhc
Confidence            8877644 445543

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.31  E-value=0.052  Score=49.43  Aligned_cols=87  Identities=11%  Similarity=0.262  Sum_probs=61.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..+++|.-.......+.|||.+| +|||.++.-  ...+++.-..-...++..+..++.+.+..+. .++...+|+++
T Consensus       270 ~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~  346 (371)
T cd04962         270 IADLFLLPSEKESFGLAALEAMACG-VPVVASNAG--GIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRA  346 (371)
T ss_pred             hcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCC--CchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            7888888875555567899999999 688888753  2345554444556677778877776665542 56778889988


Q ss_pred             HHhh-hccceec
Q 038978          221 TFKA-QKQFEWN  231 (260)
Q Consensus       221 l~~~-~~~~~y~  231 (260)
                      .++. .++|.|.
T Consensus       347 ~~~~~~~~fs~~  358 (371)
T cd04962         347 ARNRAAERFDSE  358 (371)
T ss_pred             HHHHHHHhCCHH
Confidence            8875 5666654

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.23  E-value=0.038  Score=50.64  Aligned_cols=87  Identities=13%  Similarity=0.249  Sum_probs=61.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .|..+++|.-.......++||+.+| +|||.++.-  ...+++.-....+.++..+...+.+.+..+. .++...+|.++
T Consensus       302 ~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~  378 (398)
T cd03800         302 AADVFVNPALYEPFGLTALEAMACG-LPVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRA  378 (398)
T ss_pred             hCCEEEecccccccCcHHHHHHhcC-CCEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            7888888876555567799999999 599988732  2334454445667778778877777666653 56778888888


Q ss_pred             HHhhh-ccceec
Q 038978          221 TFKAQ-KQFEWN  231 (260)
Q Consensus       221 l~~~~-~~~~y~  231 (260)
                      .++.. ++|.|.
T Consensus       379 a~~~~~~~~s~~  390 (398)
T cd03800         379 GLRRARARYTWE  390 (398)
T ss_pred             HHHHHHHhCCHH
Confidence            87655 777664

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=95.13  E-value=0.059  Score=39.95  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=47.2

Q ss_pred             EeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-CChHHHHHHHHHHHh-
Q 038978          146 CICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-ISKGKFINSHKNTFK-  223 (260)
Q Consensus       146 Cl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~~~~~~mr~~l~~-  223 (260)
                      ||.|.-.+..+.|++|++.+||.. |..+.  ..+.+.++..+-.+.++  +..++.+.+..+ ..+++.++|.++..+ 
T Consensus         2 ~Ln~~~~~~~~~r~~E~~a~G~~v-i~~~~--~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~   76 (92)
T PF13524_consen    2 NLNPSRSDGPNMRIFEAMACGTPV-ISDDS--PGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARER   76 (92)
T ss_pred             EeeCCCCCCCchHHHHHHHCCCeE-EECCh--HHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence            455543344578999999999864 44433  11223345555555554  444444444443 267788888888765 


Q ss_pred             hhccceec
Q 038978          224 AQKQFEWN  231 (260)
Q Consensus       224 ~~~~~~y~  231 (260)
                      +.+++.|.
T Consensus        77 v~~~~t~~   84 (92)
T PF13524_consen   77 VLKRHTWE   84 (92)
T ss_pred             HHHhCCHH
Confidence            44355543

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.05  E-value=0.067  Score=50.10  Aligned_cols=87  Identities=11%  Similarity=0.162  Sum_probs=59.6

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .|..++.|.-....+..++|||++|| |||.++.-  +..+++.-..-.+.++..|...+.+.+..+. .++...+|.++
T Consensus       300 ~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~  376 (396)
T cd03818         300 VSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRA  376 (396)
T ss_pred             hCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--CchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            56666666544444567999999999 78877642  4566666566677888888877776666552 55677888888


Q ss_pred             HHhhh-ccceec
Q 038978          221 TFKAQ-KQFEWN  231 (260)
Q Consensus       221 l~~~~-~~~~y~  231 (260)
                      .++.. ++|.|.
T Consensus       377 ar~~~~~~fs~~  388 (396)
T cd03818         377 ARRTALRYDLLS  388 (396)
T ss_pred             HHHHHHHhccHH
Confidence            77644 446654

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=95.01  E-value=0.064  Score=49.40  Aligned_cols=88  Identities=15%  Similarity=0.186  Sum_probs=60.4

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..+++|.-......-++|||.+|| |||.+|.-  ...+++.-......++..+..++.+.|..+. .++...+|.++
T Consensus       272 ~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~--g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~  348 (374)
T TIGR03088       272 ALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG--GNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAA  348 (374)
T ss_pred             hcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC--CcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            66666677554445678999999996 99998842  2345565556677888888887777776652 45566677766


Q ss_pred             HHhh-hccceecC
Q 038978          221 TFKA-QKQFEWNT  232 (260)
Q Consensus       221 l~~~-~~~~~y~~  232 (260)
                      .++. .+.|.|..
T Consensus       349 a~~~~~~~fs~~~  361 (374)
T TIGR03088       349 GRARAEQQFSINA  361 (374)
T ss_pred             HHHHHHHhCCHHH
Confidence            6554 45666653

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.93  E-value=0.054  Score=48.06  Aligned_cols=85  Identities=18%  Similarity=0.439  Sum_probs=54.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+.++++|.-....+..++|||.+|| |||.++.-  ...+.+.- ...+.++.+ ...+.+.+..+. .++...+|.++
T Consensus       281 ~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~  355 (375)
T cd03821         281 DADLFVLPSHSENFGIVVAEALACGT-PVVTTDKV--PWQELIEY-GCGWVVDDD-VDALAAALRRALELPQRLKAMGEN  355 (375)
T ss_pred             hCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCC--CHHHHhhc-CceEEeCCC-hHHHHHHHHHHHhCHHHHHHHHHH
Confidence            78888888776556788999999997 88887643  22333322 344444443 355555554442 34678888888


Q ss_pred             HHhh-hccceec
Q 038978          221 TFKA-QKQFEWN  231 (260)
Q Consensus       221 l~~~-~~~~~y~  231 (260)
                      .++. .++|.|.
T Consensus       356 ~~~~~~~~~s~~  367 (375)
T cd03821         356 GRALVEERFSWT  367 (375)
T ss_pred             HHHHHHHhcCHH
Confidence            7775 6666654

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=94.86  E-value=0.11  Score=47.28  Aligned_cols=87  Identities=14%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             CceEEeecCCC------CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHH
Q 038978          142 RSKFCICPGGS------LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKF  214 (260)
Q Consensus       142 ~S~FCl~p~G~------~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~  214 (260)
                      .|..+++|.-.      ......++|||.+|| |||.++.-.  ..+.+.=....+.++..+..++.+.+..+. +++..
T Consensus       264 ~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~  340 (367)
T cd05844         264 RARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGG--IPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLR  340 (367)
T ss_pred             hCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCC--chhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHH
Confidence            55665665421      223578999999996 999887532  334444456677888888888877776653 55667


Q ss_pred             HHHHHHHHh-hhccceec
Q 038978          215 INSHKNTFK-AQKQFEWN  231 (260)
Q Consensus       215 ~~mr~~l~~-~~~~~~y~  231 (260)
                      .+|.++.++ +.++|.|.
T Consensus       341 ~~~~~~a~~~~~~~~s~~  358 (367)
T cd05844         341 ARMGAAGRRRVEERFDLR  358 (367)
T ss_pred             HHHHHHHHHHHHHHCCHH
Confidence            788877766 44667664

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.73  E-value=0.071  Score=47.31  Aligned_cols=81  Identities=16%  Similarity=0.187  Sum_probs=57.5

Q ss_pred             CceEEeecCC-CCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHH
Q 038978          142 RSKFCICPGG-SLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G-~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~  219 (260)
                      .+..+++|.- .+.....++|||.+| +|||.++.-  ...+.++.....+.++..|..++.+.+..+. .++...+|++
T Consensus       262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~  338 (359)
T cd03823         262 EIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRA  338 (359)
T ss_pred             hCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHH
Confidence            8889999863 344567899999999 677777632  2345566666678888888887777776663 4677777777


Q ss_pred             HHHhhh
Q 038978          220 NTFKAQ  225 (260)
Q Consensus       220 ~l~~~~  225 (260)
                      +.++..
T Consensus       339 ~~~~~~  344 (359)
T cd03823         339 GIEPPR  344 (359)
T ss_pred             hHHHhh
Confidence            765543

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.60  E-value=0.047  Score=48.13  Aligned_cols=87  Identities=14%  Similarity=0.307  Sum_probs=56.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCCChHHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNT  221 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~~mr~~l  221 (260)
                      ++.++++|...+..+..++||+.+|| |||.++.-.  ..+.+.-....+.+...+..++.+.|..+..+.+....+++.
T Consensus       278 ~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~--~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~  354 (377)
T cd03798         278 AADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGG--IPEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLGRAAR  354 (377)
T ss_pred             hcCeeecchhhccCChHHHHHHhcCC-CEEEecCCC--hHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHHHHhHHHH
Confidence            88999999876666788999999998 677766321  223344444456778878877666666652222224444455


Q ss_pred             Hhhhccceec
Q 038978          222 FKAQKQFEWN  231 (260)
Q Consensus       222 ~~~~~~~~y~  231 (260)
                      ..+.+.+.|.
T Consensus       355 ~~~~~~~s~~  364 (377)
T cd03798         355 RRVAERFSWE  364 (377)
T ss_pred             HHHHHHhhHH
Confidence            5566666664

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.57  E-value=0.073  Score=47.01  Aligned_cols=85  Identities=13%  Similarity=0.225  Sum_probs=56.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..+++|......+.-+.||+.+|| |||.++.-.  ..+.+.=  ..+.++..+..++.+.+..+. .++...+|.++
T Consensus       268 ~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~--~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~  342 (365)
T cd03807         268 ALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGD--NAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEA  342 (365)
T ss_pred             hCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCC--hHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHH
Confidence            78888998877666788999999996 788776321  1222221  456677777776766666552 34667777776


Q ss_pred             HHh-hhccceec
Q 038978          221 TFK-AQKQFEWN  231 (260)
Q Consensus       221 l~~-~~~~~~y~  231 (260)
                      .++ +.+.|.|+
T Consensus       343 ~~~~~~~~~s~~  354 (365)
T cd03807         343 ARERIEENFSIE  354 (365)
T ss_pred             HHHHHHHhCCHH
Confidence            665 44556664

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=94.57  E-value=0.057  Score=49.83  Aligned_cols=82  Identities=20%  Similarity=0.294  Sum_probs=60.2

Q ss_pred             CceEEeecCCCC-----------CCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCCC
Q 038978          142 RSKFCICPGGSL-----------GNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIIS  210 (260)
Q Consensus       142 ~S~FCl~p~G~~-----------~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~  210 (260)
                      ++.|+|++.+++           .....++++|++| +|||+++.-.+  .+++.=....+.++  ++.++.+.|.++ +
T Consensus       225 ~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~--~~~V~~~~~G~~v~--~~~el~~~l~~~-~  298 (333)
T PRK09814        225 SKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAI--ADFIVENGLGFVVD--SLEELPEIIDNI-T  298 (333)
T ss_pred             hcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccH--HHHHHhCCceEEeC--CHHHHHHHHHhc-C
Confidence            558888877651           1234588889988 59999875332  24444456666666  567899999999 9


Q ss_pred             hHHHHHHHHHHHhhhccce
Q 038978          211 KGKFINSHKNTFKAQKQFE  229 (260)
Q Consensus       211 ~~~~~~mr~~l~~~~~~~~  229 (260)
                      ++++.+|+++.+++.+.+.
T Consensus       299 ~~~~~~m~~n~~~~~~~~~  317 (333)
T PRK09814        299 EEEYQEMVENVKKISKLLR  317 (333)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999887754

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=94.46  E-value=0.088  Score=48.49  Aligned_cols=87  Identities=15%  Similarity=0.271  Sum_probs=58.3

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccH------hHHHHHHhcCC-ChHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDV------HRLNLILKGII-SKGKF  214 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~------~~l~~~L~~i~-~~~~~  214 (260)
                      .|..+++|.-......-++||+.+|| |||.++.-.  ..+++.=....+.++..+.      ..+.+.|..+. ++++.
T Consensus       280 ~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~  356 (388)
T TIGR02149       280 NAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGG--IPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELA  356 (388)
T ss_pred             hCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCC--HHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHH
Confidence            67888888655555577899999998 888887432  3344433444566666665      66666666552 56777


Q ss_pred             HHHHHHHHh-hhccceec
Q 038978          215 INSHKNTFK-AQKQFEWN  231 (260)
Q Consensus       215 ~~mr~~l~~-~~~~~~y~  231 (260)
                      .+|.++.++ +.+.|.|.
T Consensus       357 ~~~~~~a~~~~~~~~s~~  374 (388)
T TIGR02149       357 KKMGIAGRKRAEEEFSWG  374 (388)
T ss_pred             HHHHHHHHHHHHHhCCHH
Confidence            888887776 44667765

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=94.41  E-value=0.13  Score=46.21  Aligned_cols=87  Identities=9%  Similarity=0.170  Sum_probs=57.6

Q ss_pred             CceEEeecCCC------CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHH
Q 038978          142 RSKFCICPGGS------LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKF  214 (260)
Q Consensus       142 ~S~FCl~p~G~------~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~  214 (260)
                      ++.++++|...      ......++||+.+||-. |.++.-  ...+++.=..-...+++.+..++.+.|..+. .+++.
T Consensus       255 ~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pv-i~~~~~--~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~  331 (355)
T cd03799         255 AADLFVLPSVTAADGDREGLPVVLMEAMAMGLPV-ISTDVS--GIPELVEDGETGLLVPPGDPEALADAIERLLDDPELR  331 (355)
T ss_pred             hCCEEEecceecCCCCccCccHHHHHHHHcCCCE-EecCCC--CcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHH
Confidence            78888888654      34468899999999854 555432  2345554444566777777777776666652 55667


Q ss_pred             HHHHHHHHhh-hccceec
Q 038978          215 INSHKNTFKA-QKQFEWN  231 (260)
Q Consensus       215 ~~mr~~l~~~-~~~~~y~  231 (260)
                      .+|.++.++. ...|.|.
T Consensus       332 ~~~~~~a~~~~~~~~s~~  349 (355)
T cd03799         332 REMGEAGRARVEEEFDIR  349 (355)
T ss_pred             HHHHHHHHHHHHHhcCHH
Confidence            8888887654 4556554

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.15  E-value=0.17  Score=44.88  Aligned_cols=84  Identities=13%  Similarity=0.177  Sum_probs=54.2

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .|.+.++|......+..++||+.+|| |||.++.-  .+.+.+.-....+.++..+. ++.+.+..+. .++...+|+++
T Consensus       278 ~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~  353 (374)
T cd03817         278 AADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKN  353 (374)
T ss_pred             HcCEEEecccccCcChHHHHHHHcCC-cEEEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHH
Confidence            78899999876666788999999986 56666532  23444444445556666553 4444444442 45566788888


Q ss_pred             HHhhhccce
Q 038978          221 TFKAQKQFE  229 (260)
Q Consensus       221 l~~~~~~~~  229 (260)
                      .++..+.+.
T Consensus       354 ~~~~~~~~~  362 (374)
T cd03817         354 AEESAEKFS  362 (374)
T ss_pred             HHHHHHHHH
Confidence            887666543

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=93.89  E-value=0.2  Score=45.03  Aligned_cols=86  Identities=14%  Similarity=0.210  Sum_probs=59.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .|.+++.|........-++||+.+|| |||.++.  -+..+++.=....+.++..+...+.+.|..+. .++...+|.++
T Consensus       264 ~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~--~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~  340 (365)
T cd03825         264 AADVFVVPSLQENFPNTAIEALACGT-PVVAFDV--GGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEA  340 (365)
T ss_pred             hCCEEEeccccccccHHHHHHHhcCC-CEEEecC--CCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            78899999876666788999999997 5666653  23445554445666777777777776666552 45567888888


Q ss_pred             HHhhh-cccee
Q 038978          221 TFKAQ-KQFEW  230 (260)
Q Consensus       221 l~~~~-~~~~y  230 (260)
                      .++.. +.|.|
T Consensus       341 ~~~~~~~~~s~  351 (365)
T cd03825         341 ARELAENEFDS  351 (365)
T ss_pred             HHHHHHHhcCH
Confidence            77644 44444

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=93.73  E-value=0.13  Score=47.21  Aligned_cols=88  Identities=13%  Similarity=0.266  Sum_probs=59.6

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..++.|.-.......+.|||.+|| |||.++.-.-| .+.+.=.+..+.++..+..++.+.|..+. .++...+|+++
T Consensus       278 ~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~  355 (372)
T cd04949         278 KAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEA  355 (372)
T ss_pred             hhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            67777777654445678999999998 77776521111 23343345666778778777777666653 56788899998


Q ss_pred             HHhhhccceec
Q 038978          221 TFKAQKQFEWN  231 (260)
Q Consensus       221 l~~~~~~~~y~  231 (260)
                      .++..+.|.|.
T Consensus       356 a~~~~~~~s~~  366 (372)
T cd04949         356 AYENAERYSEE  366 (372)
T ss_pred             HHHHHHHhhHH
Confidence            88777776654

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=93.66  E-value=0.22  Score=44.73  Aligned_cols=85  Identities=15%  Similarity=0.173  Sum_probs=53.0

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC--CChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI--ISKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~~~~~~mr~  219 (260)
                      .+.+.+.|.........++||+.+|| |||.+|.-  ...+++.=  ....++..+...+.+.+..+  .+++....|.+
T Consensus       262 ~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~  336 (360)
T cd04951         262 AADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAG--GVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGA  336 (360)
T ss_pred             hhceEEecccccCCChHHHHHHHcCC-CEEEecCC--ChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            67777778766555688999999999 88887742  12233321  33455666776666555554  15566666666


Q ss_pred             HHHhhhccceec
Q 038978          220 NTFKAQKQFEWN  231 (260)
Q Consensus       220 ~l~~~~~~~~y~  231 (260)
                      +-..+.+.|.|.
T Consensus       337 ~~~~~~~~~s~~  348 (360)
T cd04951         337 RRERIVKKFSIN  348 (360)
T ss_pred             HHHHHHHhcCHH
Confidence            644455666654

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=93.25  E-value=0.21  Score=47.82  Aligned_cols=86  Identities=13%  Similarity=0.304  Sum_probs=57.9

Q ss_pred             eEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHHHH
Q 038978          144 KFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKNTF  222 (260)
Q Consensus       144 ~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~l~  222 (260)
                      ..++.|.-......-+.|||.+|| |||.++.-  ...++++=.+-.+.++..|...+.+.+..+. +++...+|.++.+
T Consensus       342 Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~g--g~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~  418 (439)
T TIGR02472       342 GIFVNPALTEPFGLTLLEAAACGL-PIVATDDG--GPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGI  418 (439)
T ss_pred             CEEecccccCCcccHHHHHHHhCC-CEEEeCCC--CcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            344455544444577999999999 99999842  2345555455677788888887776665552 5566677777776


Q ss_pred             h-hhccceecC
Q 038978          223 K-AQKQFEWNT  232 (260)
Q Consensus       223 ~-~~~~~~y~~  232 (260)
                      + +.++|.|..
T Consensus       419 ~~~~~~fsw~~  429 (439)
T TIGR02472       419 EGVRRHYSWDA  429 (439)
T ss_pred             HHHHHhCCHHH
Confidence            4 566777753

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=93.18  E-value=0.26  Score=46.27  Aligned_cols=88  Identities=8%  Similarity=0.146  Sum_probs=55.7

Q ss_pred             CceEEeecCCC-CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEE-EEccccHhHHHHHHhcCCChHHHHHHHH
Q 038978          142 RSKFCICPGGS-LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSM-IIREDDVHRLNLILKGIISKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~-~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv-~i~~~~~~~l~~~L~~i~~~~~~~~mr~  219 (260)
                      .|..+++|... .....-++|||++| +|||.++.--  ..+++.-..... .++..+...+.+.+..+.++.+..+|.+
T Consensus       276 ~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg--~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~~~~~~  352 (380)
T PRK15484        276 LADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGG--ITEFVLEGITGYHLAEPMTSDSIISDINRTLADPELTQIAE  352 (380)
T ss_pred             hCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCC--cHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            67788888753 44456799999999 6899887522  334443233332 4566677777666655434444567777


Q ss_pred             HHHh-hhccceecC
Q 038978          220 NTFK-AQKQFEWNT  232 (260)
Q Consensus       220 ~l~~-~~~~~~y~~  232 (260)
                      +.++ +.++|.|..
T Consensus       353 ~ar~~~~~~fsw~~  366 (380)
T PRK15484        353 QAKDFVFSKYSWEG  366 (380)
T ss_pred             HHHHHHHHhCCHHH
Confidence            7764 567777764

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=93.03  E-value=0.31  Score=44.86  Aligned_cols=86  Identities=7%  Similarity=-0.012  Sum_probs=54.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+.++++|.........++|||.+| +|||.++.--  -.+.+.-..-.+.++. +...+.+.+..+. .++...+|+++
T Consensus       299 ~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~--~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~  374 (392)
T cd03805         299 SARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG--PLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAA  374 (392)
T ss_pred             hCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC--cHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHH
Confidence            7888888876655567789999999 5777776421  1233333333444554 5666655555442 45668888887


Q ss_pred             HHh-hhccceec
Q 038978          221 TFK-AQKQFEWN  231 (260)
Q Consensus       221 l~~-~~~~~~y~  231 (260)
                      .++ +.+.|.|.
T Consensus       375 a~~~~~~~~s~~  386 (392)
T cd03805         375 GRKRVKEKFSTE  386 (392)
T ss_pred             HHHHHHHhcCHH
Confidence            776 45666664

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=92.73  E-value=0.18  Score=46.01  Aligned_cols=63  Identities=16%  Similarity=0.148  Sum_probs=42.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      .+..+++|.-.+ .....+|||.+|| |||.++.-.  ..+++.=....+.++..+...+.+.+..+
T Consensus       261 ~ad~~v~ps~e~-~g~~~~Eama~G~-Pvi~~~~~~--~~e~i~~~~~G~~~~~~~~~~la~~i~~l  323 (351)
T cd03804         261 RARAFLFPAEED-FGIVPVEAMASGT-PVIAYGKGG--ALETVIDGVTGILFEEQTVESLAAAVERF  323 (351)
T ss_pred             hCCEEEECCcCC-CCchHHHHHHcCC-CEEEeCCCC--CcceeeCCCCEEEeCCCCHHHHHHHHHHH
Confidence            777778776533 3466899999998 999887422  23444334556777777777666666555

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>PRK10307 putative glycosyl transferase; Provisional

Probab=92.28  E-value=0.098  Score=49.18  Aligned_cols=89  Identities=7%  Similarity=0.090  Sum_probs=60.0

Q ss_pred             CceEEeecCCCCC----CchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHH
Q 038978          142 RSKFCICPGGSLG----NFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFIN  216 (260)
Q Consensus       142 ~S~FCl~p~G~~~----~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~  216 (260)
                      .+..++.|.-.+.    ....++|+|.+| +|||.++.--....+++.  ...+.++..|..++.+.|..+. .++...+
T Consensus       303 ~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~~~~~~  379 (412)
T PRK10307        303 MADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQALLRPK  379 (412)
T ss_pred             hcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCHHHHHH
Confidence            6666666643222    234589999999 588888642223335555  4577778888888888887762 5667788


Q ss_pred             HHHHHHh-hhccceecCC
Q 038978          217 SHKNTFK-AQKQFEWNTP  233 (260)
Q Consensus       217 mr~~l~~-~~~~~~y~~~  233 (260)
                      |+++.++ +.++|.|..-
T Consensus       380 ~~~~a~~~~~~~fs~~~~  397 (412)
T PRK10307        380 LGTVAREYAERTLDKENV  397 (412)
T ss_pred             HHHHHHHHHHHHcCHHHH
Confidence            9888887 4457877643

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=92.04  E-value=0.52  Score=44.13  Aligned_cols=85  Identities=8%  Similarity=0.164  Sum_probs=54.1

Q ss_pred             CceEEeecC--CCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHH
Q 038978          142 RSKFCICPG--GSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSH  218 (260)
Q Consensus       142 ~S~FCl~p~--G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr  218 (260)
                      .+..+++|.  +.|. ...+.|||.+|| |||.++.-   .+.+..=....+.++ .+..++.+.+..+. .++...+|.
T Consensus       297 ~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~  370 (397)
T TIGR03087       297 HAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANPAEREELG  370 (397)
T ss_pred             hCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCHHHHHHHH
Confidence            677777774  3343 457999999998 99988742   222211123345555 66776766666552 556678888


Q ss_pred             HHHHh-hhccceecC
Q 038978          219 KNTFK-AQKQFEWNT  232 (260)
Q Consensus       219 ~~l~~-~~~~~~y~~  232 (260)
                      ++.++ +.+.|.|..
T Consensus       371 ~~ar~~v~~~fsw~~  385 (397)
T TIGR03087       371 QAARRRVLQHYHWPR  385 (397)
T ss_pred             HHHHHHHHHhCCHHH
Confidence            88876 456777763

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=91.94  E-value=0.52  Score=44.81  Aligned_cols=87  Identities=14%  Similarity=0.264  Sum_probs=58.8

Q ss_pred             CceEEeecCCC------CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-C-ChHH
Q 038978          142 RSKFCICPGGS------LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-I-SKGK  213 (260)
Q Consensus       142 ~S~FCl~p~G~------~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~-~~~~  213 (260)
                      .+..++.|.-.      .....-+.|||.+|| |||.++.--  ..+++.=..-.+.+++.|...+.+.+..+ . +++.
T Consensus       298 ~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~-PVI~t~~~g--~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~  374 (406)
T PRK15427        298 DADVFLLPSVTGADGDMEGIPVALMEAMAVGI-PVVSTLHSG--IPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDE  374 (406)
T ss_pred             hCCEEEECCccCCCCCccCccHHHHHHHhCCC-CEEEeCCCC--chhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHH
Confidence            67777777421      222467999999996 999887432  23555545567778888888777776665 2 5567


Q ss_pred             HHHHHHHHHh-hhccceec
Q 038978          214 FINSHKNTFK-AQKQFEWN  231 (260)
Q Consensus       214 ~~~mr~~l~~-~~~~~~y~  231 (260)
                      ..+|.++.++ +.++|.|.
T Consensus       375 ~~~~~~~ar~~v~~~f~~~  393 (406)
T PRK15427        375 LAPVVKRAREKVETDFNQQ  393 (406)
T ss_pred             HHHHHHHHHHHHHHhcCHH
Confidence            8888888775 44566554

>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=90.99  E-value=0.14  Score=48.01  Aligned_cols=61  Identities=16%  Similarity=0.140  Sum_probs=42.1

Q ss_pred             CceEEeecC---CCCCCchhHHHHHhhCceeEEee--C-ce--ecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          142 RSKFCICPG---GSLGNFAQIVDSIHCGCVPVIIS--D-FH--DLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       142 ~S~FCl~p~---G~~~~s~rl~dal~~GCIPVii~--d-~~--~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      +=+|.|+..   ..+..+-.+++|+.+|||||+++  . ++  .+|=...|+.++|.      .+.+|.+.|+.+
T Consensus       227 ~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~------s~~~La~yl~~l  295 (349)
T PF00852_consen  227 KYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK------SPKELADYLKYL  295 (349)
T ss_dssp             TEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS------SHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC------CHHHHHHHHHHH
Confidence            778888754   34566889999999999999999  3 22  35556677777664      467788888887

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=90.88  E-value=0.91  Score=43.36  Aligned_cols=86  Identities=12%  Similarity=0.111  Sum_probs=52.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCC---CCceEEEEccccHhHHHHHHhcCC--ChHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILD---WNKLSMIIREDDVHRLNLILKGII--SKGKFIN  216 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~id---w~~fsv~i~~~~~~~l~~~L~~i~--~~~~~~~  216 (260)
                      .|..++.|.-......-++|||++||.||. ++. --|.++++.   -..-.+.+.  +...+.+.+..+.  +++....
T Consensus       324 ~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~  399 (419)
T cd03806         324 TASIGLHTMWNEHFGIGVVEYMAAGLIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLR  399 (419)
T ss_pred             hCeEEEECCccCCcccHHHHHHHcCCcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHH
Confidence            778888876555556889999999997664 442 135566653   222332232  4544444443331  5556666


Q ss_pred             HHHHHHhhhccceec
Q 038978          217 SHKNTFKAQKQFEWN  231 (260)
Q Consensus       217 mr~~l~~~~~~~~y~  231 (260)
                      |+++.+++.++|.|+
T Consensus       400 ~~~~~~~~~~~fs~~  414 (419)
T cd03806         400 IRRAARSSVKRFSDE  414 (419)
T ss_pred             HHHHHHHHHHhhCHH
Confidence            777777787777664

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=90.82  E-value=0.77  Score=43.52  Aligned_cols=82  Identities=16%  Similarity=0.241  Sum_probs=53.1

Q ss_pred             eecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEcc-ccHhHHHHHHhcCC-ChHHHHHHHHHHHhh
Q 038978          147 ICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIRE-DDVHRLNLILKGII-SKGKFINSHKNTFKA  224 (260)
Q Consensus       147 l~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~-~~~~~l~~~L~~i~-~~~~~~~mr~~l~~~  224 (260)
                      +.|.........+.|||++|+ |||.++.--  ..++++=..-.+.++. .+..++.+.|..+. +++...+|+++.++.
T Consensus       315 v~~S~~Eg~p~~llEAma~G~-PVIas~vgg--~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~  391 (407)
T cd04946         315 VNLSESEGLPVSIMEAMSFGI-PVIATNVGG--TPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREK  391 (407)
T ss_pred             EeCCccccccHHHHHHHHcCC-CEEeCCCCC--cHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            344443344678999999995 999887332  2345544444555554 46777777776663 578888999888875


Q ss_pred             h-ccceec
Q 038978          225 Q-KQFEWN  231 (260)
Q Consensus       225 ~-~~~~y~  231 (260)
                      + ++|.+.
T Consensus       392 ~~~~f~~~  399 (407)
T cd04946         392 WEENFNAS  399 (407)
T ss_pred             HHHHcCHH
Confidence            5 455443

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=90.19  E-value=1.3  Score=38.58  Aligned_cols=83  Identities=11%  Similarity=0.115  Sum_probs=52.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHH----HHHHhcCCChHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRL----NLILKGIISKGKFINS  217 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l----~~~L~~i~~~~~~~~m  217 (260)
                      .+.++++|.........++||+.+||. ||.++.-  ...+++.=....+.++.++...+    ..++.....++...+|
T Consensus       263 ~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  339 (353)
T cd03811         263 AADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERL  339 (353)
T ss_pred             hCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHH
Confidence            788999987655556789999999985 5666543  23345555566677888887765    3333333244556666


Q ss_pred             HH-HHHhhhcc
Q 038978          218 HK-NTFKAQKQ  227 (260)
Q Consensus       218 r~-~l~~~~~~  227 (260)
                      .+ +...+.++
T Consensus       340 ~~~~~~~~~~~  350 (353)
T cd03811         340 AAAARERVARE  350 (353)
T ss_pred             HHHHHHHHHHH
Confidence            66 33334433

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=90.10  E-value=1.1  Score=39.96  Aligned_cols=62  Identities=13%  Similarity=0.194  Sum_probs=39.0

Q ss_pred             CceEEeecCC-CCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          142 RSKFCICPGG-SLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       142 ~S~FCl~p~G-~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      .+.+++.|.- .......++|||.+|+ |||.+|.--  ..++++-..-.+.++.  +..+.+.|+.+
T Consensus       243 ~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~--~~e~i~~~~~g~l~~~--~~~l~~~l~~l  305 (335)
T cd03802         243 NARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGA--VPEVVEDGVTGFLVDS--VEELAAAVARA  305 (335)
T ss_pred             hCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCC--chhheeCCCcEEEeCC--HHHHHHHHHHH
Confidence            7888888864 2334578999999997 999988532  2344433322333343  55566555554

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=90.09  E-value=1  Score=41.61  Aligned_cols=86  Identities=10%  Similarity=0.078  Sum_probs=51.4

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHH-hcCCChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLIL-KGIISKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L-~~i~~~~~~~~mr~~  220 (260)
                      .+..++.|........-+.||+.+| +|||.++.-.++  ++|.-....+.++..+  .+.+.+ +-+.+++...+|.++
T Consensus       273 ~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~--~~a~~i~~ll~~~~~~~~~~~~  347 (372)
T cd03792         273 ASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVE--EAAVRILYLLRDPELRRKMGAN  347 (372)
T ss_pred             hCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcH--HHHHHHHHHHcCHHHHHHHHHH
Confidence            6677777766555567899999999 599998743322  3333333333344322  222222 222256677888888


Q ss_pred             HHhh-hccceecC
Q 038978          221 TFKA-QKQFEWNT  232 (260)
Q Consensus       221 l~~~-~~~~~y~~  232 (260)
                      .++. .+.|.|..
T Consensus       348 a~~~~~~~~s~~~  360 (372)
T cd03792         348 AREHVRENFLITR  360 (372)
T ss_pred             HHHHHHHHcCHHH
Confidence            8774 56777653

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>PHA01633 putative glycosyl transferase group 1

Probab=90.06  E-value=0.63  Score=43.62  Aligned_cols=33  Identities=30%  Similarity=0.476  Sum_probs=25.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCc
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDF  175 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~  175 (260)
                      .+.+.+.|.-......-+.|||.+|| |||.++-
T Consensus       223 ~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~  255 (335)
T PHA01633        223 AMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM  255 (335)
T ss_pred             hCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence            56666677655556688999999999 9998864

>PRK14099 glycogen synthase; Provisional

Probab=89.52  E-value=0.99  Score=44.19  Aligned_cols=87  Identities=16%  Similarity=0.251  Sum_probs=57.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCC-CCCCC--------ceEEEEccccHhHHHHHHhc----C
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFND-ILDWN--------KLSMIIREDDVHRLNLILKG----I  208 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~-~idw~--------~fsv~i~~~~~~~l~~~L~~----i  208 (260)
                      .+.+.+.|.-..+...-..|||.+||+||+ ++.=-+  .| ++|..        .-.+.++..+...|.+.|..    +
T Consensus       369 ~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl--~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~  445 (485)
T PRK14099        369 GADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGL--ADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALF  445 (485)
T ss_pred             cCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCc--cceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHh
Confidence            478888887777777889999999999988 442111  12 22332        34677788888777766653    2


Q ss_pred             CChHHHHHHHHHHHhhhccceecCC
Q 038978          209 ISKGKFINSHKNTFKAQKQFEWNTP  233 (260)
Q Consensus       209 ~~~~~~~~mr~~l~~~~~~~~y~~~  233 (260)
                      ..++...+|+++..  .+.|.|...
T Consensus       446 ~d~~~~~~l~~~~~--~~~fSw~~~  468 (485)
T PRK14099        446 ADPVAWRRLQRNGM--TTDVSWRNP  468 (485)
T ss_pred             cCHHHHHHHHHHhh--hhcCChHHH
Confidence            24567778887764  356777654

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=89.45  E-value=1.2  Score=40.07  Aligned_cols=83  Identities=18%  Similarity=0.323  Sum_probs=48.2

Q ss_pred             CceEEeecCCC-CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHH
Q 038978          142 RSKFCICPGGS-LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~-~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~  219 (260)
                      .+..++.|.-. +.....++|||.+|| |||.++.-  +..+++.-.  ...++..+.  +.+.+..+. .++.+.+|.+
T Consensus       267 ~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~--g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~  339 (363)
T cd04955         267 YAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGDK--AIYFKVGDD--LASLLEELEADPEEVSAMAK  339 (363)
T ss_pred             hCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecCC--eeEecCchH--HHHHHHHHHhCHHHHHHHHH
Confidence            56666666544 444577999999999 77777632  234444432  233344442  333333331 3467777888


Q ss_pred             HHHhhh-ccceec
Q 038978          220 NTFKAQ-KQFEWN  231 (260)
Q Consensus       220 ~l~~~~-~~~~y~  231 (260)
                      +.++.. +.|.|+
T Consensus       340 ~~~~~~~~~fs~~  352 (363)
T cd04955         340 AARERIREKYTWE  352 (363)
T ss_pred             HHHHHHHHhCCHH
Confidence            777644 346664

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=88.63  E-value=1.2  Score=47.73  Aligned_cols=85  Identities=15%  Similarity=0.194  Sum_probs=61.0

Q ss_pred             EEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHHHHh
Q 038978          145 FCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKNTFK  223 (260)
Q Consensus       145 FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~l~~  223 (260)
                      .++.|.-..+...-+.|||++|+ |||.++.-  ...++|.-..-.+.++..|...|.+.|..+. .++...+|.++.++
T Consensus       574 VFV~PS~~EgFGLvlLEAMAcGl-PVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr~  650 (1050)
T TIGR02468       574 VFINPAFIEPFGLTLIEAAAHGL-PMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLK  650 (1050)
T ss_pred             eeeCCcccCCCCHHHHHHHHhCC-CEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence            44456544555688999999995 99998742  3345555556677889888888887776653 56778889998887


Q ss_pred             hhccceecC
Q 038978          224 AQKQFEWNT  232 (260)
Q Consensus       224 ~~~~~~y~~  232 (260)
                      ..+.|.|..
T Consensus       651 ~v~~FSWe~  659 (1050)
T TIGR02468       651 NIHLFSWPE  659 (1050)
T ss_pred             HHHHCCHHH
Confidence            777777764

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=88.52  E-value=0.55  Score=47.16  Aligned_cols=103  Identities=12%  Similarity=0.184  Sum_probs=62.2

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecC-C-CCCC-CCCceEEEEc-------cccHhHHHHHHhcCCCh
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLP-F-NDIL-DWNKLSMIIR-------EDDVHRLNLILKGIISK  211 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lP-f-~~~i-dw~~fsv~i~-------~~~~~~l~~~L~~i~~~  211 (260)
                      .+.-++.|.-..++..-..||+.+| +|||.++.--++ + .+++ +-....+.|.       .+.+.+|.+.|..+...
T Consensus       474 g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~  552 (590)
T cd03793         474 GCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL  552 (590)
T ss_pred             hceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC
Confidence            5666677776667678899999999 599999864432 0 1233 3334566665       23345666666654222


Q ss_pred             HHHHHHHHH--HHhhhccceecCCCCCccHHHHHHH
Q 038978          212 GKFINSHKN--TFKAQKQFEWNTPPIKYGTTFHMVV  245 (260)
Q Consensus       212 ~~~~~mr~~--l~~~~~~~~y~~~~~~~D~af~~~~  245 (260)
                      +..++|.++  ..+..+.|.|..-...|..|.++++
T Consensus       553 ~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al  588 (590)
T cd03793         553 SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLAL  588 (590)
T ss_pred             cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence            333334443  3478888999875444433666655

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=88.22  E-value=1.1  Score=43.32  Aligned_cols=86  Identities=12%  Similarity=0.178  Sum_probs=56.7

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCC------CceEEEEccccHhHHHHHHhcCC-ChHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDW------NKLSMIIREDDVHRLNLILKGII-SKGKF  214 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw------~~fsv~i~~~~~~~l~~~L~~i~-~~~~~  214 (260)
                      .+..++.|.-......-++|||.+|| |||.+|.--  ..++++=      ....+.++..|...+.+.+..+. +++..
T Consensus       370 ~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~--~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~  446 (475)
T cd03813         370 KLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGS--CRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELR  446 (475)
T ss_pred             hCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCC--hHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHH
Confidence            56666666544444578999999998 888876321  2233322      24677888888887777776653 66778


Q ss_pred             HHHHHHHHh-hhcccee
Q 038978          215 INSHKNTFK-AQKQFEW  230 (260)
Q Consensus       215 ~~mr~~l~~-~~~~~~y  230 (260)
                      .+|.++.++ +.+.|.|
T Consensus       447 ~~~~~~a~~~v~~~~s~  463 (475)
T cd03813         447 RAMGEAGRKRVERYYTL  463 (475)
T ss_pred             HHHHHHHHHHHHHhCCH
Confidence            888887776 4444444

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=87.64  E-value=2.9  Score=38.51  Aligned_cols=82  Identities=13%  Similarity=0.083  Sum_probs=50.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCCChH---HHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKG---KFINSH  218 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~---~~~~mr  218 (260)
                      .+..++.|........-++|||++| +|||.++..-- ..+++.=..-.+.++..|..++.+.+..+..+.   ....++
T Consensus       257 ~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g-~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~~~~~~~  334 (359)
T PRK09922        257 NVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSG-PRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKYQHDAIP  334 (359)
T ss_pred             cCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCC-hHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccCCHHHHH
Confidence            3566677766555568899999999 58888872211 224454344556668888887776666652222   234555


Q ss_pred             HHHHhhh
Q 038978          219 KNTFKAQ  225 (260)
Q Consensus       219 ~~l~~~~  225 (260)
                      +++++..
T Consensus       335 ~~~~~~~  341 (359)
T PRK09922        335 NSIERFY  341 (359)
T ss_pred             HHHHHhh
Confidence            5554433

>PHA01630 putative group 1 glycosyl transferase

Probab=87.31  E-value=1.6  Score=40.64  Aligned_cols=32  Identities=9%  Similarity=0.211  Sum_probs=23.3

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeC
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISD  174 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d  174 (260)
                      .+..++.|.-......-+.|||++|| |||.++
T Consensus       209 ~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~  240 (331)
T PHA01630        209 GCDILFYPVRGGAFEIPVIEALALGL-DVVVTE  240 (331)
T ss_pred             hCCEEEECCccccCChHHHHHHHcCC-CEEEeC
Confidence            66777776544444577999999997 677776

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=87.10  E-value=1.4  Score=39.50  Aligned_cols=63  Identities=13%  Similarity=0.070  Sum_probs=40.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      ++.++++|.-......-+.|||.+|| |||.++.-.  ..+++.- ........++..++.+.+..+
T Consensus       266 ~adi~v~ps~~E~~~~~~lEAma~G~-PvI~s~~~~--~~~~i~~-~~~~~~~~~~~~~~a~~i~~l  328 (358)
T cd03812         266 AMDVFLFPSLYEGLPLVLIEAQASGL-PCILSDTIT--KEVDLTD-LVKFLSLDESPEIWAEEILKL  328 (358)
T ss_pred             hcCEEEecccccCCCHHHHHHHHhCC-CEEEEcCCc--hhhhhcc-CccEEeCCCCHHHHHHHHHHH
Confidence            88888998776666789999999998 555665322  2233332 334445555556666655555

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=86.70  E-value=1.8  Score=41.78  Aligned_cols=86  Identities=17%  Similarity=0.260  Sum_probs=53.4

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCC-CCC-----ceEEEEccccHhHHHHHHhcC----C-C
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL-DWN-----KLSMIIREDDVHRLNLILKGI----I-S  210 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~i-dw~-----~fsv~i~~~~~~~l~~~L~~i----~-~  210 (260)
                      .+.++++|.-..+...-..|||.+||.||. ++.-  ...+++ |.+     ...+.+++.+...+.+.+..+    . .
T Consensus       365 ~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~g--g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~  441 (473)
T TIGR02095       365 GADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTG--GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQD  441 (473)
T ss_pred             hCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCC--CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcC
Confidence            788899998777767788999999996654 4422  122222 221     456677777776665554443    1 3


Q ss_pred             hHHHHHHHHHHHhhhccceecC
Q 038978          211 KGKFINSHKNTFKAQKQFEWNT  232 (260)
Q Consensus       211 ~~~~~~mr~~l~~~~~~~~y~~  232 (260)
                      ++...+|.++..  .+.|.|..
T Consensus       442 ~~~~~~~~~~~~--~~~fsw~~  461 (473)
T TIGR02095       442 PSLWEALQKNAM--SQDFSWDK  461 (473)
T ss_pred             HHHHHHHHHHHh--ccCCCcHH
Confidence            455667766553  34566653

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=86.68  E-value=0.69  Score=35.98  Aligned_cols=62  Identities=18%  Similarity=0.323  Sum_probs=33.3

Q ss_pred             CceEEeecCC-CCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          142 RSKFCICPGG-SLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       142 ~S~FCl~p~G-~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      ++.++++|.- +...+..++|++.+|| |||.++.   ++++.+.-....+.+ ..+..++.+.|..+
T Consensus        70 ~~dv~l~p~~~~~~~~~k~~e~~~~G~-pvi~~~~---~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l  132 (135)
T PF13692_consen   70 AADVGLIPSRFNEGFPNKLLEAMAAGK-PVIASDN---GAEGIVEEDGCGVLV-ANDPEELAEAIERL  132 (135)
T ss_dssp             C-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE--TT-HHHHHHHHHHH
T ss_pred             hCCEEEEEeeCCCcCcHHHHHHHHhCC-CEEECCc---chhhheeecCCeEEE-CCCHHHHHHHHHHH
Confidence            4677777753 2235689999999998 5565655   445444335566666 66666666665543

>PLN02949 transferase, transferring glycosyl groups

Probab=86.24  E-value=1.4  Score=42.94  Aligned_cols=87  Identities=13%  Similarity=0.090  Sum_probs=50.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCC-CCC-ceEEEEccccHhHHHHHHhcCC--ChHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL-DWN-KLSMIIREDDVHRLNLILKGII--SKGKFINS  217 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~i-dw~-~fsv~i~~~~~~~l~~~L~~i~--~~~~~~~m  217 (260)
                      ++.+++.|.-+.....-..|||.+||+||.-...  =|-++++ ++. .-.-++. .++..+.+.+..+.  ++++..+|
T Consensus       354 ~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~~~~~~r~~m  430 (463)
T PLN02949        354 GAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLRMRETERLEI  430 (463)
T ss_pred             hCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC-CCHHHHHHHHHHHHhCCHHHHHHH
Confidence            5677776665554557899999999877665322  1333332 111 1111122 25555555554441  45677789


Q ss_pred             HHHHHhhhccceec
Q 038978          218 HKNTFKAQKQFEWN  231 (260)
Q Consensus       218 r~~l~~~~~~~~y~  231 (260)
                      +++.++..++|.|.
T Consensus       431 ~~~ar~~~~~FS~e  444 (463)
T PLN02949        431 AAAARKRANRFSEQ  444 (463)
T ss_pred             HHHHHHHHHHcCHH
Confidence            99888777777765

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=85.96  E-value=1.1  Score=42.07  Aligned_cols=91  Identities=13%  Similarity=0.206  Sum_probs=50.6

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC--ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII--SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~--~~~~~~~mr~  219 (260)
                      .+..++.|.-.......+.|||.+|| |||.++.--  ..+++.-.. .+.++. +...+.+.|..+.  ..++...+++
T Consensus       269 ~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg--~~e~i~~~~-~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~  343 (398)
T cd03796         269 QGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGG--IPEVLPPDM-ILLAEP-DVESIVRKLEEAISILRTGKHDPWS  343 (398)
T ss_pred             hCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCC--chhheeCCc-eeecCC-CHHHHHHHHHHHHhChhhhhhHHHH
Confidence            56667777544444578999999997 667776432  234444332 344443 5555444444331  2233233455


Q ss_pred             HHHhhhccceecCCCCCc
Q 038978          220 NTFKAQKQFEWNTPPIKY  237 (260)
Q Consensus       220 ~l~~~~~~~~y~~~~~~~  237 (260)
                      ...++.++|.|.....++
T Consensus       344 ~~~~~~~~fs~~~~~~~~  361 (398)
T cd03796         344 FHNRVKKMYSWEDVAKRT  361 (398)
T ss_pred             HHHHHHhhCCHHHHHHHH
Confidence            556677888887554343

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>PRK14098 glycogen synthase; Provisional

Probab=85.76  E-value=1.9  Score=42.19  Aligned_cols=89  Identities=11%  Similarity=0.165  Sum_probs=54.1

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecC--CCCCCCCCceEEEEccccHhHHHHHHhcC----CChHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLP--FNDILDWNKLSMIIREDDVHRLNLILKGI----ISKGKFI  215 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lP--f~~~idw~~fsv~i~~~~~~~l~~~L~~i----~~~~~~~  215 (260)
                      .+.++++|.-..+...-..|||.+||+||+...+- ++  ..+...-..-.+.++..+...+.+.|..+    ..+++..
T Consensus       381 ~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~  459 (489)
T PRK14098        381 GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWE  459 (489)
T ss_pred             hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-CceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHH
Confidence            78888898877666678899999999998765321 11  01111113345667777777666655432    1455666


Q ss_pred             HHHHHHHhhhccceecCC
Q 038978          216 NSHKNTFKAQKQFEWNTP  233 (260)
Q Consensus       216 ~mr~~l~~~~~~~~y~~~  233 (260)
                      +|+++.  +.+.|.|...
T Consensus       460 ~~~~~~--~~~~fsw~~~  475 (489)
T PRK14098        460 ELVLEA--MERDFSWKNS  475 (489)
T ss_pred             HHHHHH--hcCCCChHHH
Confidence            665543  3356666543

>PRK00654 glgA glycogen synthase; Provisional

Probab=85.73  E-value=2.4  Score=40.96  Aligned_cols=86  Identities=10%  Similarity=0.248  Sum_probs=53.3

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCC-CC-----CceEEEEccccHhHHHHHHhcC----CCh
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL-DW-----NKLSMIIREDDVHRLNLILKGI----ISK  211 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~i-dw-----~~fsv~i~~~~~~~l~~~L~~i----~~~  211 (260)
                      .+.+++.|.=..+...-..|||.+||+||+ ++.--  ..|.+ |.     +.-.+.++..+...+.+.|..+    ..+
T Consensus       356 ~aDv~v~PS~~E~~gl~~lEAma~G~p~V~-~~~gG--~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~  432 (466)
T PRK00654        356 GADMFLMPSRFEPCGLTQLYALRYGTLPIV-RRTGG--LADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQP  432 (466)
T ss_pred             hCCEEEeCCCCCCchHHHHHHHHCCCCEEE-eCCCC--ccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCH
Confidence            788888887777777889999999998876 43211  12222 22     1446677887877666555443    124


Q ss_pred             HHHHHHHHHHHhhhccceecC
Q 038978          212 GKFINSHKNTFKAQKQFEWNT  232 (260)
Q Consensus       212 ~~~~~mr~~l~~~~~~~~y~~  232 (260)
                      +...+|.++..  .+.|.|..
T Consensus       433 ~~~~~~~~~~~--~~~fsw~~  451 (466)
T PRK00654        433 PLWRALQRQAM--AQDFSWDK  451 (466)
T ss_pred             HHHHHHHHHHh--ccCCChHH
Confidence            45666666553  25566653

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=83.23  E-value=3.7  Score=40.49  Aligned_cols=87  Identities=15%  Similarity=0.162  Sum_probs=50.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCc-eecCCCCCCCCCceEEEEc----cc---c-HhHHHHHHhcCCChH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDF-HDLPFNDILDWNKLSMIIR----ED---D-VHRLNLILKGIISKG  212 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~-~~lPf~~~idw~~fsv~i~----~~---~-~~~l~~~L~~i~~~~  212 (260)
                      .+.-++.|.-......-+.|||.+|| |||.+|- +-.  .++|.=..-.+.++    +.   + +..+.+.+..+..++
T Consensus       392 ~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~--~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~  468 (500)
T TIGR02918       392 DYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN--PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNSN  468 (500)
T ss_pred             hCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC--HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhChH
Confidence            34444444433334578999999997 7777762 221  23333333333444    12   2 455555444442566


Q ss_pred             HHHHHHHHHHhhhccceec
Q 038978          213 KFINSHKNTFKAQKQFEWN  231 (260)
Q Consensus       213 ~~~~mr~~l~~~~~~~~y~  231 (260)
                      ...+|.++..+..+.|.|.
T Consensus       469 ~~~~~~~~a~~~a~~fs~~  487 (500)
T TIGR02918       469 DIDAFHEYSYQIAEGFLTA  487 (500)
T ss_pred             HHHHHHHHHHHHHHhcCHH
Confidence            7889999998887776654

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=82.97  E-value=3.7  Score=36.62  Aligned_cols=86  Identities=10%  Similarity=0.105  Sum_probs=56.4

Q ss_pred             CceEEeecCC--CCCCchhHHHHHhhCceeEEeeCceecCCCCCC-CCCceEEEEccccHhHHHHHHhcCC-ChHHHHHH
Q 038978          142 RSKFCICPGG--SLGNFAQIVDSIHCGCVPVIISDFHDLPFNDIL-DWNKLSMIIREDDVHRLNLILKGII-SKGKFINS  217 (260)
Q Consensus       142 ~S~FCl~p~G--~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~i-dw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~m  217 (260)
                      .+..+++|.-  .......+.||+.+|| |||.++.-..+  +.+ +.......++..+...+.+.+..+. .+++..+|
T Consensus       263 ~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~~--~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~  339 (357)
T cd03795         263 ACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTGG--SYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERL  339 (357)
T ss_pred             hCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCch--hHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHH
Confidence            6888888752  1223467999999985 77776632221  222 2355667778888887777777663 67788899


Q ss_pred             HHHHHhhh-cccee
Q 038978          218 HKNTFKAQ-KQFEW  230 (260)
Q Consensus       218 r~~l~~~~-~~~~y  230 (260)
                      +++.++.. +.|.|
T Consensus       340 ~~~~~~~~~~~~s~  353 (357)
T cd03795         340 GEAARERAEEEFTA  353 (357)
T ss_pred             HHHHHHHHHHhcch
Confidence            99888754 55554

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=81.94  E-value=3.5  Score=39.15  Aligned_cols=78  Identities=19%  Similarity=0.338  Sum_probs=46.9

Q ss_pred             CceEEeecC----CCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-C---hHH
Q 038978          142 RSKFCICPG----GSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-S---KGK  213 (260)
Q Consensus       142 ~S~FCl~p~----G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~---~~~  213 (260)
                      .+..+++|.    |.+ ...-++|||.+|+ |||.++.-.  ..+++.-..-.+.++  +...|.+.+..+. .   +++
T Consensus       314 ~aDv~v~~~~~~~~~~-~p~~~~Eama~G~-PVI~s~~~~--~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~  387 (415)
T cd03816         314 SADLGVSLHTSSSGLD-LPMKVVDMFGCGL-PVCALDFKC--IDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGK  387 (415)
T ss_pred             hCCEEEEccccccccC-CcHHHHHHHHcCC-CEEEeCCCC--HHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHH
Confidence            555555432    333 3567999999998 999987432  224443333333443  5655555554441 2   678


Q ss_pred             HHHHHHHHHhhh
Q 038978          214 FINSHKNTFKAQ  225 (260)
Q Consensus       214 ~~~mr~~l~~~~  225 (260)
                      ..+|.++.++..
T Consensus       388 ~~~m~~~~~~~~  399 (415)
T cd03816         388 LNSLKKGAQEES  399 (415)
T ss_pred             HHHHHHHHHHhh
Confidence            888888887655

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	260
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	97.42
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	95.75
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	95.67
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	95.49
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	95.26
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	95.13
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	94.82
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	94.35
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	94.29
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	93.99
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	92.78
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	91.74
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	91.59
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	91.5
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	91.4
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	90.97
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	90.46
2nzw_A	371	Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H	87.76
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	86.66
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	86.59

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=97.42  E-value=0.00028  Score=55.93  Aligned_cols=88  Identities=10%  Similarity=0.112  Sum_probs=59.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..++.|.-.......+.||+.+||+|||..+..- ...+++.-...  .++..+...+.+.+..+. .++...+|.++
T Consensus        74 ~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~  150 (166)
T 3qhp_A           74 TCTLYVHAANVESEAIACLEAISVGIVPVIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNE  150 (166)
T ss_dssp             TCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            577778887655567899999999999999943211 12223333333  567777777776666653 67788899998


Q ss_pred             HHhhhccceecC
Q 038978          221 TFKAQKQFEWNT  232 (260)
Q Consensus       221 l~~~~~~~~y~~  232 (260)
                      .++..++|.|..
T Consensus       151 ~~~~~~~~s~~~  162 (166)
T 3qhp_A          151 YAKSALNYTLEN  162 (166)
T ss_dssp             HHHHHHHHC---
T ss_pred             HHHHHHHCChhh
Confidence            888778888764

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=95.75  E-value=0.026  Score=50.61  Aligned_cols=87  Identities=11%  Similarity=0.153  Sum_probs=63.7

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..++.|.-.......++||+.+| +|||.++.-  ...+++.-....+.++..+..++.+.|..+. .++...+|.++
T Consensus       284 ~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~  360 (394)
T 2jjm_A          284 MSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVG--GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGER  360 (394)
T ss_dssp             TCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECCT--TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hCCEEEeccccCCCchHHHHHHhcC-CCEEEecCC--ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            7888888876555678899999999 578877732  3455665556677888888887777776652 56677888888


Q ss_pred             HHhhh-ccceec
Q 038978          221 TFKAQ-KQFEWN  231 (260)
Q Consensus       221 l~~~~-~~~~y~  231 (260)
                      .++.. +.|.|.
T Consensus       361 ~~~~~~~~~s~~  372 (394)
T 2jjm_A          361 ARESVYEQFRSE  372 (394)
T ss_dssp             HHHHHHHHSCHH
T ss_pred             HHHHHHHhCCHH
Confidence            87765 777765

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=95.67  E-value=0.012  Score=47.67  Aligned_cols=82  Identities=17%  Similarity=0.144  Sum_probs=55.3

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-C-ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-I-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~-~~~~~~~mr~  219 (260)
                      .+.++++|.-.......++||+.+|| |||.++.-  ...+++ -....+.++..+...+.+.|..+ . .++.+.+|.+
T Consensus       115 ~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~  190 (200)
T 2bfw_A          115 SVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDII-TNETGILVKAGDPGELANAILKALELSRSDLSKFRE  190 (200)
T ss_dssp             TCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCH--HHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCC--ChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            57888888766666788999999998 67777632  122333 23445566766776666555554 2 6778888988


Q ss_pred             HHHhhhcc
Q 038978          220 NTFKAQKQ  227 (260)
Q Consensus       220 ~l~~~~~~  227 (260)
                      +.++..+.
T Consensus       191 ~a~~~~~~  198 (200)
T 2bfw_A          191 NCKKRAMS  198 (200)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            88776554

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=95.49  E-value=0.029  Score=50.91  Aligned_cols=87  Identities=11%  Similarity=0.183  Sum_probs=62.4

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..++.|.-.......++||+.+|| |||.++.-  ...+++.-....+.++..+...+.+.|..+. .++...+|.++
T Consensus       325 ~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~  401 (438)
T 3c48_A          325 AADIVAVPSFNESFGLVAMEAQASGT-PVIAARVG--GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGED  401 (438)
T ss_dssp             HCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCT--THHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hCCEEEECccccCCchHHHHHHHcCC-CEEecCCC--ChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            77888888766666788999999998 88888732  2234454455667778778877777766652 56677888888


Q ss_pred             HHhhhccceec
Q 038978          221 TFKAQKQFEWN  231 (260)
Q Consensus       221 l~~~~~~~~y~  231 (260)
                      .++..+.|.|.
T Consensus       402 ~~~~~~~~s~~  412 (438)
T 3c48_A          402 AVEHARTFSWA  412 (438)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHhCCHH
Confidence            87766666665

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=95.26  E-value=0.012  Score=52.71  Aligned_cols=87  Identities=16%  Similarity=0.270  Sum_probs=60.4

Q ss_pred             CceEEeecCC-CCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHH
Q 038978          142 RSKFCICPGG-SLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G-~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~  219 (260)
                      .+.+++.|.. .......++||+.+|| |||.++.-.  ..+.+.-....+.++..+..++.+.|..+. .++...+|.+
T Consensus       282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~  358 (406)
T 2gek_A          282 SADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDA--FRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVA  358 (406)
T ss_dssp             HSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHH--HHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCc--HHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence            7888899853 4444678999999997 788877421  223334345566777778877777776652 5677888888


Q ss_pred             HHHhhhccceec
Q 038978          220 NTFKAQKQFEWN  231 (260)
Q Consensus       220 ~l~~~~~~~~y~  231 (260)
                      +.++..+.|.|.
T Consensus       359 ~~~~~~~~~s~~  370 (406)
T 2gek_A          359 RASERVHRYDWS  370 (406)
T ss_dssp             HHHHHGGGGBHH
T ss_pred             HHHHHHHhCCHH
Confidence            888776676664

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=95.13  E-value=0.024  Score=50.03  Aligned_cols=87  Identities=11%  Similarity=0.139  Sum_probs=60.9

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEc-cccHhHHHHHHhcCC-ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIR-EDDVHRLNLILKGII-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~-~~~~~~l~~~L~~i~-~~~~~~~mr~  219 (260)
                      .+..++.|.-......-++||+.+|| |||.++.-  ...+.+.-....+.++ ..+..++.+.|..+. .++...+|.+
T Consensus       270 ~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~  346 (374)
T 2iw1_A          270 AADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC--GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAE  346 (374)
T ss_dssp             HCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS--TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             hcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC--CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHH
Confidence            67888888765556788999999998 88888742  2233333334566776 667777776666652 5677888999


Q ss_pred             HHHhhhccceec
Q 038978          220 NTFKAQKQFEWN  231 (260)
Q Consensus       220 ~l~~~~~~~~y~  231 (260)
                      +.++..+.+.|.
T Consensus       347 ~~~~~~~~~~~~  358 (374)
T 2iw1_A          347 NARHYADTQDLY  358 (374)
T ss_dssp             HHHHHHHHSCCS
T ss_pred             HHHHHHHHhhHH
Confidence            888877765544

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=94.82  E-value=0.047  Score=48.38  Aligned_cols=86  Identities=14%  Similarity=0.224  Sum_probs=62.3

Q ss_pred             CceEEeecCCC-------CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHH
Q 038978          142 RSKFCICPGGS-------LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGK  213 (260)
Q Consensus       142 ~S~FCl~p~G~-------~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~  213 (260)
                      .+.+++.|.-.       ......++||+.+|| |||.++.  -...++++-. ..+.++..+...+.+.+..+. .++.
T Consensus       272 ~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~--~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~  347 (394)
T 3okp_A          272 AADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTS--GGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIR  347 (394)
T ss_dssp             HCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSS--TTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHH
T ss_pred             hCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCC--CChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHHH
Confidence            78888888765       555788999999995 8888774  2334555555 677888888887777776662 6677


Q ss_pred             HHHHHHHHHhhh-ccceec
Q 038978          214 FINSHKNTFKAQ-KQFEWN  231 (260)
Q Consensus       214 ~~~mr~~l~~~~-~~~~y~  231 (260)
                      ..+|.++.++.. ++|.|.
T Consensus       348 ~~~~~~~~~~~~~~~~s~~  366 (394)
T 3okp_A          348 RAAMGAAGRAHVEAEWSWE  366 (394)
T ss_dssp             HHHHHHHHHHHHHHHTBHH
T ss_pred             HHHHHHHHHHHHHHhCCHH
Confidence            888888877744 457665

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=94.35  E-value=0.044  Score=48.38  Aligned_cols=81  Identities=15%  Similarity=0.212  Sum_probs=59.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCC------CCCCCCCceEEEEcccc--HhHHHHHHhcCCChHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPF------NDILDWNKLSMIIREDD--VHRLNLILKGIISKGK  213 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf------~~~idw~~fsv~i~~~~--~~~l~~~L~~i~~~~~  213 (260)
                      .+..+++|.|    ..-+.||+.+|| |||.++.--.|.      +++++-.. .+.++..|  ...|.+.|..+ .++.
T Consensus       254 ~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l-~~~~  326 (364)
T 1f0k_A          254 WADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW-SRET  326 (364)
T ss_dssp             HCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC-CHHH
T ss_pred             hCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc-CHHH
Confidence            6788888876    577999999997 888876433332      12333333 77888888  88999999999 8888


Q ss_pred             HHHHHHHHHhhhccce
Q 038978          214 FINSHKNTFKAQKQFE  229 (260)
Q Consensus       214 ~~~mr~~l~~~~~~~~  229 (260)
                      ..+|.++.++..+.+.
T Consensus       327 ~~~~~~~~~~~~~~~~  342 (364)
T 1f0k_A          327 LLTMAERARAASIPDA  342 (364)
T ss_dssp             HHHHHHHHHHTCCTTH
T ss_pred             HHHHHHHHHHhhccCH
Confidence            9999888876655443

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=94.29  E-value=0.022  Score=45.77  Aligned_cols=63  Identities=19%  Similarity=0.258  Sum_probs=39.2

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI  208 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i  208 (260)
                      .+.+++.|.-.......++|||.+|| |||.++.-  ...+.+.-....+.+ ..+...+.+.|..+
T Consensus        97 ~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l  159 (177)
T 2f9f_A           97 RCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEG--GFKETVINEKTGYLV-NADVNEIIDAMKKV  159 (177)
T ss_dssp             HCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSH--HHHHHCCBTTTEEEE-CSCHHHHHHHHHHH
T ss_pred             hCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCC--CHHHHhcCCCccEEe-CCCHHHHHHHHHHH
Confidence            46677776544444678999999998 78887742  122334334444555 66776666655555

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=93.99  E-value=0.079  Score=47.63  Aligned_cols=86  Identities=15%  Similarity=0.091  Sum_probs=56.7

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCC--------CCce-------EE--EEccccHhHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILD--------WNKL-------SM--IIREDDVHRLNLI  204 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~id--------w~~f-------sv--~i~~~~~~~l~~~  204 (260)
                      .+..++.|.-......-+.|||.+|| |||.++.--.  .++++        ....       .+  .++..+...+.+.
T Consensus       273 ~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~--~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~  349 (413)
T 3oy2_A          273 ACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGA--DDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEA  349 (413)
T ss_dssp             HCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHH--HHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHH
T ss_pred             hCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCCh--HHHHccCcccccccccccccccccCcceeeCCCCHHHHHHH
Confidence            67788888765556788999999996 8888873211  11111        1111       33  5666678878777


Q ss_pred             HhcCC-ChHHHHHHHHHHHhhh-ccceec
Q 038978          205 LKGII-SKGKFINSHKNTFKAQ-KQFEWN  231 (260)
Q Consensus       205 L~~i~-~~~~~~~mr~~l~~~~-~~~~y~  231 (260)
                      | .+. .++...+|.++.++.. +.|.|.
T Consensus       350 i-~l~~~~~~~~~~~~~a~~~~~~~fs~~  377 (413)
T 3oy2_A          350 F-TFFKDEKNRKEYGKRVQDFVKTKPTWD  377 (413)
T ss_dssp             H-HHTTSHHHHHHHHHHHHHHHTTSCCHH
T ss_pred             H-HHhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence            7 553 5667788888887754 567665

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=92.78  E-value=0.13  Score=47.67  Aligned_cols=86  Identities=13%  Similarity=0.151  Sum_probs=58.3

Q ss_pred             eEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-CChHHHHHHHHHHH
Q 038978          144 KFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-ISKGKFINSHKNTF  222 (260)
Q Consensus       144 ~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~~~~~~mr~~l~  222 (260)
                      ..++.|.-......-+.||+.+|| |||.++.--  ..+++.-....+.++..+...+.+.|..+ ..++...+|.++.+
T Consensus       360 dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g--~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~  436 (499)
T 2r60_A          360 SVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGG--PAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGK  436 (499)
T ss_dssp             CEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBH--HHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             CEEEECcccCCCCcHHHHHHHcCC-CEEEecCCC--HHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            777778655555678999999997 788887321  22334334455677777887777766665 25667788888777


Q ss_pred             hhhc-cceecC
Q 038978          223 KAQK-QFEWNT  232 (260)
Q Consensus       223 ~~~~-~~~y~~  232 (260)
                      +... +|.|..
T Consensus       437 ~~~~~~fs~~~  447 (499)
T 2r60_A          437 QRVEERYTWQE  447 (499)
T ss_dssp             HHHHHHSBHHH
T ss_pred             HHHHHhCCHHH
Confidence            6554 477754

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=91.74  E-value=0.093  Score=47.03  Aligned_cols=86  Identities=17%  Similarity=0.214  Sum_probs=59.5

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-C-ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-I-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-~-~~~~~~~mr~  219 (260)
                      .+..+++|.-......-++|||++|| |||.++.--  ..++++-. ..+.++..|...+.+.+..+ . .++...+|.+
T Consensus       330 ~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~--~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~  405 (439)
T 3fro_A          330 SVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGG--LRDIITNE-TGILVKAGDPGELANAILKALELSRSDLSKFRE  405 (439)
T ss_dssp             TCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTH--HHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHH
T ss_pred             HCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCC--cceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            78888888766666788999999995 788876421  22334322 56677777777666665544 1 4677888888


Q ss_pred             HHHhhhccceec
Q 038978          220 NTFKAQKQFEWN  231 (260)
Q Consensus       220 ~l~~~~~~~~y~  231 (260)
                      +.++..+.|.|.
T Consensus       406 ~~~~~~~~~s~~  417 (439)
T 3fro_A          406 NCKKRAMSFSWE  417 (439)
T ss_dssp             HHHHHHHTSCHH
T ss_pred             HHHHHHhhCcHH
Confidence            888877776664

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=91.59  E-value=0.33  Score=44.68  Aligned_cols=84  Identities=11%  Similarity=0.113  Sum_probs=54.3

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCC---------ceEEEEccccHhHHHHHHhcC----
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWN---------KLSMIIREDDVHRLNLILKGI----  208 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~---------~fsv~i~~~~~~~l~~~L~~i----  208 (260)
                      .+..++.|.-......-+.|||.+|| |||.++.--  ..+++.-.         ...+.++..+...|.+.|..+    
T Consensus       365 ~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg--~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~  441 (485)
T 1rzu_A          365 GCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGG--LADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY  441 (485)
T ss_dssp             HCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHH--HHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH
T ss_pred             cCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCC--hhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHh
Confidence            67777888765556688999999997 677776321  12333322         455677877877776666654    


Q ss_pred             CChHHHHHHHHHHHhhhcccee
Q 038978          209 ISKGKFINSHKNTFKAQKQFEW  230 (260)
Q Consensus       209 ~~~~~~~~mr~~l~~~~~~~~y  230 (260)
                      ..++...+|.++.++  +.|.|
T Consensus       442 ~~~~~~~~~~~~~~~--~~fs~  461 (485)
T 1rzu_A          442 HDPKLWTQMQKLGMK--SDVSW  461 (485)
T ss_dssp             TCHHHHHHHHHHHHT--CCCBH
T ss_pred             CCHHHHHHHHHHHHH--HhCCh
Confidence            156667777777653  44444

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=91.50  E-value=0.16  Score=45.64  Aligned_cols=85  Identities=12%  Similarity=0.037  Sum_probs=54.2

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKFINSHKN  220 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~~~mr~~  220 (260)
                      .+..++.|.-......-+.||+.+|| |||.++.--  ..+++.-....+.++  +...+.+.|..+. .++...+|.++
T Consensus       315 ~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g--~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~~~~~~~~~  389 (416)
T 2x6q_A          315 ASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGG--IKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAK  389 (416)
T ss_dssp             HCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHH--HHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCC--ChhheecCCCeEEEC--CHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            56677777655555688999999997 788887421  122333233444555  6666666665542 56777888888


Q ss_pred             HHhhh-ccceec
Q 038978          221 TFKAQ-KQFEWN  231 (260)
Q Consensus       221 l~~~~-~~~~y~  231 (260)
                      .++.. +.|.|.
T Consensus       390 a~~~~~~~fs~~  401 (416)
T 2x6q_A          390 AKERVRKNFIIT  401 (416)
T ss_dssp             HHHHHHHHTBHH
T ss_pred             HHHHHHHHcCHH
Confidence            77644 466664

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=91.40  E-value=0.13  Score=47.49  Aligned_cols=91  Identities=12%  Similarity=0.089  Sum_probs=51.4

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCCChHHHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKFINSHKNT  221 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~~mr~~l  221 (260)
                      .+..+++|.-....+.-+.|||++|| |||.++.   ...++++-..-.+.++..|...|.+.|..+..+.+..+ + +.
T Consensus       314 ~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~---g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~-~-~~  387 (413)
T 2x0d_A          314 RSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY---ENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRD-V-DK  387 (413)
T ss_dssp             HCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB---TTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC--------
T ss_pred             hCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC---CcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHH-H-hH
Confidence            56666666532223466899999998 7776543   22356655566778888888877776666511112111 1 34


Q ss_pred             HhhhccceecCCCCCcc
Q 038978          222 FKAQKQFEWNTPPIKYG  238 (260)
Q Consensus       222 ~~~~~~~~y~~~~~~~D  238 (260)
                      ++..+.|.|......++
T Consensus       388 ~~~~~~~~W~~~~~~~~  404 (413)
T 2x0d_A          388 KESSNMMFYINEFNEFS  404 (413)
T ss_dssp             -CCBSCGGGCCCC---T
T ss_pred             HHHHHhCCHHHHHHHHH
Confidence            44455788886543343

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=90.97  E-value=0.2  Score=46.16  Aligned_cols=85  Identities=7%  Similarity=0.121  Sum_probs=54.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCC---------ceEEEEccccHhHHHHHHhcC----
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWN---------KLSMIIREDDVHRLNLILKGI----  208 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~---------~fsv~i~~~~~~~l~~~L~~i----  208 (260)
                      .+..++.|.-......-+.|||.+|| |||.++.--  ..+++.-.         ...+.++..+...+.+.|..+    
T Consensus       366 ~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg--~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~  442 (485)
T 2qzs_A          366 GADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGG--LADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLW  442 (485)
T ss_dssp             HCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHH--HHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHH
T ss_pred             hCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCC--ccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHc
Confidence            67777777765556688999999996 677776321  22333322         456677877877776666554    


Q ss_pred             CChHHHHHHHHHHHhhhccceec
Q 038978          209 ISKGKFINSHKNTFKAQKQFEWN  231 (260)
Q Consensus       209 ~~~~~~~~mr~~l~~~~~~~~y~  231 (260)
                      ..++...+|.++.++  +.|.|.
T Consensus       443 ~~~~~~~~~~~~~~~--~~fs~~  463 (485)
T 2qzs_A          443 SRPSLWRFVQRQAMA--MDFSWQ  463 (485)
T ss_dssp             TSHHHHHHHHHHHHH--CCCCHH
T ss_pred             CCHHHHHHHHHHHHh--hcCCHH
Confidence            156667778777653  455543

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=90.46  E-value=0.24  Score=44.83  Aligned_cols=84  Identities=18%  Similarity=0.230  Sum_probs=58.5

Q ss_pred             CceEEeecCCC-------CCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcCCChHHH
Q 038978          142 RSKFCICPGGS-------LGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGIISKGKF  214 (260)
Q Consensus       142 ~S~FCl~p~G~-------~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~  214 (260)
                      ++.|+|+..-.       ......++|+|++|+ |||.++.-.+  .+++.=....+.++  ++.++.+.|..+ +++++
T Consensus       233 ~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~~~--~~~v~~~~~G~~~~--~~~e~~~~i~~l-~~~~~  306 (339)
T 3rhz_A          233 QGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGIAN--QELIENNGLGWIVK--DVEEAIMKVKNV-NEDEY  306 (339)
T ss_dssp             TEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTCTT--THHHHHHTCEEEES--SHHHHHHHHHHC-CHHHH
T ss_pred             hCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccChhH--HHHHHhCCeEEEeC--CHHHHHHHHHHh-CHHHH
Confidence            67899997211       112467999999995 9998763221  12232234455554  477888899999 99999


Q ss_pred             HHHHHHHHhhhccceec
Q 038978          215 INSHKNTFKAQKQFEWN  231 (260)
Q Consensus       215 ~~mr~~l~~~~~~~~y~  231 (260)
                      .+|+++.++..+.+.+.
T Consensus       307 ~~m~~na~~~a~~~~~~  323 (339)
T 3rhz_A          307 IELVKNVRSFNPILRKG  323 (339)
T ss_dssp             HHHHHHHHHHTHHHHTT
T ss_pred             HHHHHHHHHHHHHhhcc
Confidence            99999999988876643

>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*

Probab=87.76  E-value=0.6  Score=43.09  Aligned_cols=70  Identities=14%  Similarity=0.223  Sum_probs=45.7

Q ss_pred             CceEEeecC---CCCCCchhHHHHHhhCceeEEeeCc-e--ecCCCCCCCCCceEEEEccccHhHHHHHHhcCC-ChHHH
Q 038978          142 RSKFCICPG---GSLGNFAQIVDSIHCGCVPVIISDF-H--DLPFNDILDWNKLSMIIREDDVHRLNLILKGII-SKGKF  214 (260)
Q Consensus       142 ~S~FCl~p~---G~~~~s~rl~dal~~GCIPVii~d~-~--~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~~~~  214 (260)
                      +=+|.|+..   ..+..+-.|++|+.+|||||+++.. +  .+|=...|+-.+|      +...+|.+.|+.+. .++.+
T Consensus       231 ~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~Pp~SfI~~~dF------~s~~~La~yL~~L~~n~~~Y  304 (371)
T 2nzw_A          231 QYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAY  304 (371)
T ss_dssp             TEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHH
T ss_pred             cCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCCCCceEEcccC------CCHHHHHHHHHHHhcCHHHH
Confidence            678888754   3466789999999999999999863 2  1232333333333      34667888888772 44555


Q ss_pred             HHH
Q 038978          215 INS  217 (260)
Q Consensus       215 ~~m  217 (260)
                      .++
T Consensus       305 ~~y  307 (371)
T 2nzw_A          305 LDM  307 (371)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=86.66  E-value=0.73  Score=46.72  Aligned_cols=87  Identities=13%  Similarity=0.158  Sum_probs=58.2

Q ss_pred             ceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhcC-----CChHHHHHH
Q 038978          143 SKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKGI-----ISKGKFINS  217 (260)
Q Consensus       143 S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~i-----~~~~~~~~m  217 (260)
                      +..+++|.-......-+.|||.+|| |||.++.--  ..+++.-....+.++..|...+.+.|..+     ..++...+|
T Consensus       665 aDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG--~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m  741 (816)
T 3s28_A          665 KGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGG--PAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEI  741 (816)
T ss_dssp             TCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBT--HHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHH
T ss_pred             CeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCC--hHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence            3566777655556788999999997 788876321  12334445556778887777666555322     167788888


Q ss_pred             HHHHHhhh-ccceecC
Q 038978          218 HKNTFKAQ-KQFEWNT  232 (260)
Q Consensus       218 r~~l~~~~-~~~~y~~  232 (260)
                      .++.++.. ++|.|..
T Consensus       742 ~~~ar~~a~~~fSwe~  757 (816)
T 3s28_A          742 SKGGLQRIEEKYTWQI  757 (816)
T ss_dssp             HHHHHHHHHHSCCHHH
T ss_pred             HHHHHHHHHHhCCHHH
Confidence            88888755 7787754

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=86.59  E-value=0.68  Score=40.31  Aligned_cols=65  Identities=9%  Similarity=0.061  Sum_probs=45.8

Q ss_pred             CceEEeecCC----------CCCCchhHHHHHhhCceeEEeeCceecCCCCCCCC--CceEEEEccccHhHHHHHHhcCC
Q 038978          142 RSKFCICPGG----------SLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDW--NKLSMIIREDDVHRLNLILKGII  209 (260)
Q Consensus       142 ~S~FCl~p~G----------~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw--~~fsv~i~~~~~~~l~~~L~~i~  209 (260)
                      .+..++.|.-          .......+.||+.+|| |||.++.-  ...+++.-  ....+.++. +...+.+.|..+ 
T Consensus       231 ~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l-  305 (342)
T 2iuy_A          231 SAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNG--CLAEIVPSVGEVVGYGTDF-APDEARRTLAGL-  305 (342)
T ss_dssp             HCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTT--THHHHGGGGEEECCSSSCC-CHHHHHHHHHTS-
T ss_pred             hCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCC--ChHHHhcccCCCceEEcCC-CHHHHHHHHHHH-
Confidence            7777888766          4555688999999997 88887741  22334433  344556677 888999999888 


Q ss_pred             Ch
Q 038978          210 SK  211 (260)
Q Consensus       210 ~~  211 (260)
                      -+
T Consensus       306 ~~  307 (342)
T 2iuy_A          306 PA  307 (342)
T ss_dssp             CC
T ss_pred             HH
Confidence            54

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	260
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	94.6
d2nzwa1	349	Alpha1,3-fucosyltransferase FucT {Helicobacter pyl	94.12
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	93.19
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	90.34
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	90.3
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	89.84

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=94.60  E-value=0.011  Score=51.08  Aligned_cols=87  Identities=18%  Similarity=0.255  Sum_probs=60.0

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhc-CC-ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKG-II-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~-i~-~~~~~~~mr~  219 (260)
                      .+...++|.-....+.-+.|||.+|+ |||.++.=-  ..++++ .+..+.++..+..+|.+.|.. +. .++...+|.+
T Consensus       328 ~adi~v~~s~~e~~~~~~~Eama~G~-Pvi~~~~g~--~~e~i~-~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~  403 (437)
T d2bisa1         328 SVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGG--LRDIIT-NETGILVKAGDPGELANAILKALELSRSDLSKFRE  403 (437)
T ss_dssp             TCSEEEECCSCCSSCHHHHHHHTTTC-EEEEESCTT--HHHHCC-TTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHH
T ss_pred             hhccccccccccccchHHHHHHHCCC-CEEEeCCCC--cHHhEE-CCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            67777777655555688999999997 888876311  123344 234677888888776655533 21 5678899999


Q ss_pred             HHHhhhccceecC
Q 038978          220 NTFKAQKQFEWNT  232 (260)
Q Consensus       220 ~l~~~~~~~~y~~  232 (260)
                      +.++..+.|.|..
T Consensus       404 ~~~~~~~~~s~~~  416 (437)
T d2bisa1         404 NCKKRAMSFSWEK  416 (437)
T ss_dssp             HHHHHHHHSCHHH
T ss_pred             HHHHHHHhCCHHH
Confidence            9998877777653

>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=94.12  E-value=0.02  Score=50.47  Aligned_cols=72  Identities=13%  Similarity=0.152  Sum_probs=47.1

Q ss_pred             CceEEeecCC---CCCCchhHHHHHhhCceeEEeeC-ceecCCCCCCCCCceEEEEc-cccHhHHHHHHhcCC-ChHHHH
Q 038978          142 RSKFCICPGG---SLGNFAQIVDSIHCGCVPVIISD-FHDLPFNDILDWNKLSMIIR-EDDVHRLNLILKGII-SKGKFI  215 (260)
Q Consensus       142 ~S~FCl~p~G---~~~~s~rl~dal~~GCIPVii~d-~~~lPf~~~idw~~fsv~i~-~~~~~~l~~~L~~i~-~~~~~~  215 (260)
                      +-+|+||...   .+..+-.++||+.+|||||..++ .+..-|    +=.+| |.+. -..+.++.+.|..+. .++.+.
T Consensus       231 ~ykF~l~~EN~~~~~YvTEKi~da~~~g~iPIy~G~~~i~~~f----~~~sf-I~~~df~s~~el~~~i~~l~~n~~~Y~  305 (349)
T d2nzwa1         231 QYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDF----NPKSF-VNVHDFKNFDEAIDYIKYLHTHKNAYL  305 (349)
T ss_dssp             TEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTS----CGGGS-EEGGGSSSHHHHHHHHHHHHTCHHHHH
T ss_pred             CCCeEEEECCcCCCCCcchHHHHHHhCCeEEEEECCCcHHHcC----CCccE-EEhhhCCCHHHHHHHHHHHhcCHHHHH
Confidence            8999999753   35678999999999999999996 332222    22333 2222 235677888888772 344455


Q ss_pred             HHH
Q 038978          216 NSH  218 (260)
Q Consensus       216 ~mr  218 (260)
                      +|-
T Consensus       306 ~~~  308 (349)
T d2nzwa1         306 DML  308 (349)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=93.19  E-value=0.044  Score=45.26  Aligned_cols=86  Identities=12%  Similarity=0.130  Sum_probs=55.4

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceE-EEEccccHhHHHHHHhcCC-ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLS-MIIREDDVHRLNLILKGII-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fs-v~i~~~~~~~l~~~L~~i~-~~~~~~~mr~  219 (260)
                      .+...+.|.-....+.-+.|||.+|+ |||.+|.--+  .+++.-.... +..+..+...+.+.|..+. .++...+|.+
T Consensus       269 ~adv~v~ps~~E~~~~~~~EAma~G~-PvI~s~~~g~--~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~  345 (370)
T d2iw1a1         269 AADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVCGY--AHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAE  345 (370)
T ss_dssp             HCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTSTT--THHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             cccccccccccccccceeeecccCCe-eEEEeCCCCh--HHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence            67777777644445688999999995 8888874322  2222212222 3445567777777666642 5677788888


Q ss_pred             HHHhhhcccee
Q 038978          220 NTFKAQKQFEW  230 (260)
Q Consensus       220 ~l~~~~~~~~y  230 (260)
                      +.++..+.+.+
T Consensus       346 ~ar~~~~~~~~  356 (370)
T d2iw1a1         346 NARHYADTQDL  356 (370)
T ss_dssp             HHHHHHHHSCC
T ss_pred             HHHHHHHHhCh
Confidence            88776665443

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.34  E-value=0.25  Score=43.53  Aligned_cols=87  Identities=10%  Similarity=0.164  Sum_probs=55.8

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCC--------CceEEEEccccHhHHHHHHhcC----C
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDW--------NKLSMIIREDDVHRLNLILKGI----I  209 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw--------~~fsv~i~~~~~~~l~~~L~~i----~  209 (260)
                      .|..++.|.-..+...-+.|||++|| |||.+|.=-+| |-+.|.        ..-.+.++..|...|.+.|+.+    .
T Consensus       365 ~aD~~v~PS~~E~fglv~lEAma~G~-PvVas~~GG~~-E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~  442 (477)
T d1rzua_         365 GCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH  442 (477)
T ss_dssp             HCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT
T ss_pred             hCccccCCccccCCCHHHHHHHHcCC-CEEEcCCCCCc-ceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhC
Confidence            78899999877777788999999998 56666621111 001111        2234567888888777666432    1


Q ss_pred             ChHHHHHHHHHHHhhhccceecC
Q 038978          210 SKGKFINSHKNTFKAQKQFEWNT  232 (260)
Q Consensus       210 ~~~~~~~mr~~l~~~~~~~~y~~  232 (260)
                      .++...+|+++..  .++|.|..
T Consensus       443 ~~~~~~~~~~~a~--~~~fsw~~  463 (477)
T d1rzua_         443 DPKLWTQMQKLGM--KSDVSWEK  463 (477)
T ss_dssp             CHHHHHHHHHHHH--TCCCBHHH
T ss_pred             CHHHHHHHHHHHH--HhhCCHHH
Confidence            4677788887763  45677653

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.30  E-value=0.089  Score=39.94  Aligned_cols=33  Identities=21%  Similarity=0.252  Sum_probs=25.6

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCc
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDF  175 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~  175 (260)
                      .|.++++|.-.+..+..++||+.+|| |||.++.
T Consensus        86 ~ad~~i~ps~~e~~~~~~~Ea~~~g~-pvi~s~~  118 (166)
T d2f9fa1          86 RCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNE  118 (166)
T ss_dssp             HCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESS
T ss_pred             cccccccccccccccccccccccccc-cceeecC
Confidence            57778888777777889999999995 5556663

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=89.84  E-value=0.31  Score=37.59  Aligned_cols=83  Identities=18%  Similarity=0.184  Sum_probs=54.2

Q ss_pred             CceEEeecCCCCCCchhHHHHHhhCceeEEeeCceecCCCCCCCCCceEEEEccccHhHHHHHHhc-CC-ChHHHHHHHH
Q 038978          142 RSKFCICPGGSLGNFAQIVDSIHCGCVPVIISDFHDLPFNDILDWNKLSMIIREDDVHRLNLILKG-II-SKGKFINSHK  219 (260)
Q Consensus       142 ~S~FCl~p~G~~~~s~rl~dal~~GCIPVii~d~~~lPf~~~idw~~fsv~i~~~~~~~l~~~L~~-i~-~~~~~~~mr~  219 (260)
                      .|...++|.-....+..+.|||.+|| |||.++.-..  .++++- .....++..+..++.+.+.. +. .++++.+|++
T Consensus       111 ~~di~v~ps~~e~~~~~~~Eam~~G~-pvI~~~~~~~--~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~  186 (196)
T d2bfwa1         111 SVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGL--RDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRE  186 (196)
T ss_dssp             TCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCHHH--HHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             cccccccccccccccccchhhhhcCc-eeeecCCCcc--ceeecC-CceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            46666676655556799999999997 5566663222  233443 34566777777766654433 21 6889999999


Q ss_pred             HHHhhhccc
Q 038978          220 NTFKAQKQF  228 (260)
Q Consensus       220 ~l~~~~~~~  228 (260)
                      +.++....|
T Consensus       187 ~a~~~a~~f  195 (196)
T d2bfwa1         187 NCKKRAMSF  195 (196)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhC
Confidence            888766543