Citrus Sinensis ID: 039021

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460----
Protein Sequence
MEGDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCPTGGGSKGHAFKVPRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHICP
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEEEEccccEEEEEEEcccccHHHHHHccccccHHHHHHHHHHHHHHHcccccccEEEccccHHHHHccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEcccccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHcHcccccccccccccccccccccHHHcccccccEEEEEEEccccccEEEEEEEcccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccEEEEEEccccccHHHHHHHcccccHHHHHHHHHHHHHHHHcccccEEEEccccHHHHccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHcccHcccccHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHccHHHHHHHccEEEEcccHHcccEEEEEccccccc
Coil and Loop (DISEMBL)
megdaaasgdfdMQVIGNFLSfasrgdrvglnqmlregtspnvqdydkRTALHLAASEGHAPIVELLLQYKANlnlkdrwqrtpltdarlyghRDICRILevnggkdfihdqpltvrnekdsnevnfdiSELNTLHSsmveqgvfgesqtakwrgTWVVKTVIKSHIYHPVKMVLsakdncklrelrhpnilQFLGSIVLGEEMILITeylpkgnlkgilskkvrlDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQihpnqensqrndnssiasnvlddtkkdicSFGYIFYQMLEgkhlqtnnsfdfmhlksvnfepkfqisrcpNRLKQLIAQctnkdpskrptFAAVIITLEEVSAClgrsalcptgggskghafkvprVTIYSIRIRLKDLTVVTTrmghvqdyfpnpfrflnsshcaysfcptrtadstiivnstpettvpllilgnyhicp
Flexible Loop (DISEMBL)
megdaaasgdfdmQVIGNFLSFASRGDRVGLNQMLRegtspnvqdYDKRTALHLAASEGHAPIVELLLQYKANLnlkdrwqrtpltdarlygHRDICRILEVNGGKDFIHDQpltvrnekdsneVNFDISELNTLHSSMVEQGVFgesqtakwrgtWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPnqensqrndnSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAqctnkdpskrPTFAAVIITLEEVSACLGRSALCptgggskghafkvpRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVnstpettvpllilgnyhicp
Low Complexity Region (SEG)
MEGDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCPTGGGSKGHAFKVPRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHICP
Disordered region (IsUnstruct)
***********DMQVIGNFLSFASRGDRVGL**************YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTV********VNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQI*******************LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD**KRPTFAAVIITLEEVSACLGRSALCPTGGGSKGHAFKVPRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHIC*
Disordered Region (DISOPRED)
************MQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRI**************************NFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV*FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE***************************************************************HCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHIC*
Disordered Region (DISEMBL)
********GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPN*********SSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCPTGGGSKGHAFKVPRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHICP
Disordered Region (DISPRO)
********GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCPTGG*SKGHAFKVPRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHICP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCPTGGGSKGHAFKVPRVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRFLNSSHCAYSFCPTRTADSTIIVNSTPETTVPLLILGNYHICP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	464	2.2.26 [Sep-21-2011]
Q86HG9	1024	Probable serine/threonine	yes	no	0.502	0.227	0.277	4e-16
Q99J82	452	Integrin-linked protein k	yes	no	0.732	0.752	0.242	9e-15
O55222	452	Integrin-linked protein k	yes	no	0.732	0.752	0.242	9e-15
Q13418	452	Integrin-linked protein k	no	no	0.732	0.752	0.242	1e-14
Q5R5V4	452	Integrin-linked protein k	yes	no	0.721	0.741	0.239	2e-14
Q3SWY2	452	Integrin-linked protein k	yes	no	0.732	0.752	0.239	3e-14
P57044	451	Integrin-linked protein k	yes	no	0.719	0.740	0.234	5e-14
Q8GXE6	888	Potassium channel AKT6 OS	no	no	0.181	0.094	0.476	2e-13
Q94A76	820	Potassium channel GORK OS	no	no	0.200	0.113	0.404	2e-13
Q54H45	690	Probable serine/threonine	no	no	0.450	0.302	0.246	5e-13

>sp|Q86HG9|Y9871_DICDI Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2

 Score = 86.7 bits (213), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 37/270 (13%)

Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAK 178
           +DS ++N   +EL  L    +  G  GE    +W+GT V VKT+ KS +    K     K
Sbjct: 348 EDSLKLNIQENEL--LFIKKIGSGACGEVCQYEWKGTPVAVKTIFKS-LLRKDKKEEFEK 404

Query: 179 DNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYAL 236
           +   L+ LRHPN++ F+G+ +L   + +ITEYL +G+L+ +L+   K  L L   ++  +
Sbjct: 405 EVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVLTTMNKSELSLSVKVKMLI 464

Query: 237 DIAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
           D+A+                    NLL D   ++K+ ++ +  F      +   +     
Sbjct: 465 DVAQGMNYLHTYSPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFISGGIGSSAKTFCGTL 524

Query: 277 SSIASNVLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRC 332
           S IA  V +     TK D+ SFG + +++L  K    N S   +        P+   S C
Sbjct: 525 SWIAPEVFNGSGYTTKVDVYSFGIVLWEILTHKQPSGNISATSLG------HPELP-SNC 577

Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
           P     LI +C N++P +RP F+ +++ L+
Sbjct: 578 PQSFSDLIKECCNRNPDQRPNFSQILLKLK 607

Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q99J82|ILK_RAT Integrin-linked protein kinase OS=Rattus norvegicus GN=Ilk PE=2 SV=1

 Score = 82.0 bits (201), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 164/417 (39%), Gaps = 77/417 (18%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD---------------QPLTVRNEKDSN 123
                PL  A  +G   +   L  NG    I +               + L  R EK   
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 157

Query: 124 EVN---------------------------FDISELNTLHSSMVEQGVFGESQTAKWRGT 156
            +N                            D  +LN L  + + +   GE    +W+G 
Sbjct: 158 NLNRIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFL--AKLNENHSGELWKGRWQGN 215

Query: 157 WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVL--GEEMILITEYLPKG 214
            +V  V+K   +   K     ++  +LR   HPN+L  LG+          LIT ++P G
Sbjct: 216 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQAPPAPHPTLITHWMPYG 275

Query: 215 NLKGILSKKVR--LDLPTALRYALDIARNL--------------------LQDEGDHLKI 252
           +L  +L +     +D   A+++ALD+AR +                    + DE    +I
Sbjct: 276 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI 335

Query: 253 GEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK---DICSFGYIFYQML--EGKHL 307
               V+  ++   P +  +             +DT +   D+ SF  + ++++  E    
Sbjct: 336 SMADVKFSFQC--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 393

Query: 308 QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             +N    M +      P       P+  K L+  C N+DP+KRP F  ++  LE++
Sbjct: 394 DLSNMEIGMKVALEGLRPTIPPGISPHVCK-LMKICMNEDPAKRPKFDMIVPILEKM 449

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O55222|ILK_MOUSE Integrin-linked protein kinase OS=Mus musculus GN=Ilk PE=1 SV=2

 Score = 82.0 bits (201), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 164/417 (39%), Gaps = 77/417 (18%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD---------------QPLTVRNEKDSN 123
                PL  A  +G   +   L  NG    I +               + L  R EK   
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 157

Query: 124 EVN---------------------------FDISELNTLHSSMVEQGVFGESQTAKWRGT 156
            +N                            D  +LN L  + + +   GE    +W+G 
Sbjct: 158 NLNRIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFL--AKLNENHSGELWKGRWQGN 215

Query: 157 WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVL--GEEMILITEYLPKG 214
            +V  V+K   +   K     ++  +LR   HPN+L  LG+          LIT ++P G
Sbjct: 216 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQAPPAPHPTLITHWMPYG 275

Query: 215 NLKGILSKKVR--LDLPTALRYALDIARNL--------------------LQDEGDHLKI 252
           +L  +L +     +D   A+++ALD+AR +                    + DE    +I
Sbjct: 276 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI 335

Query: 253 GEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK---DICSFGYIFYQML--EGKHL 307
               V+  ++   P +  +             +DT +   D+ SF  + ++++  E    
Sbjct: 336 SMADVKFSFQC--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 393

Query: 308 QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             +N    M +      P       P+  K L+  C N+DP+KRP F  ++  LE++
Sbjct: 394 DLSNMEIGMKVALEGLRPTIPPGISPHVCK-LMKICMNEDPAKRPKFDMIVPILEKM 449

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q13418|ILK_HUMAN Integrin-linked protein kinase OS=Homo sapiens GN=ILK PE=1 SV=2

 Score = 81.3 bits (199), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 164/417 (39%), Gaps = 77/417 (18%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD---------------QPLTVRNEKDSN 123
                PL  A  +G   +   L  NG    I +               + L  R EK   
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 157

Query: 124 EVN---------------------------FDISELNTLHSSMVEQGVFGESQTAKWRGT 156
            +N                            D  +LN L  + + +   GE    +W+G 
Sbjct: 158 NLNRIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFL--TKLNENHSGELWKGRWQGN 215

Query: 157 WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI--VLGEEMILITEYLPKG 214
            +V  V+K   +   K     ++  +LR   HPN+L  LG+          LIT ++P G
Sbjct: 216 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 275

Query: 215 NLKGILSKKVR--LDLPTALRYALDIARNL--------------------LQDEGDHLKI 252
           +L  +L +     +D   A+++ALD+AR +                    + DE    +I
Sbjct: 276 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI 335

Query: 253 GEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK---DICSFGYIFYQML--EGKHL 307
               V+  ++   P +  +             +DT +   D+ SF  + ++++  E    
Sbjct: 336 SMADVKFSFQC--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 393

Query: 308 QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             +N    M +      P       P+  K L+  C N+DP+KRP F  ++  LE++
Sbjct: 394 DLSNMEIGMKVALEGLRPTIPPGISPHVCK-LMKICMNEDPAKRPKFDMIVPILEKM 449

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5R5V4|ILK_PONAB Integrin-linked protein kinase OS=Pongo abelii GN=ILK PE=2 SV=1

 Score = 80.9 bits (198), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 166/422 (39%), Gaps = 87/422 (20%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD---------------QPLTVRNEKDSN 123
                PL  A  +G   +   L  NG    I +               + L  R EK   
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 157

Query: 124 EVN---------------------------FDISELNTLHSSMVEQGVFGESQTAKWRGT 156
            +N                            D  +LN L  + + +   GE    +W+G 
Sbjct: 158 NLNRIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFL--TKLNENHSGELWKGRWQGN 215

Query: 157 WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI--VLGEEMILITEYLPKG 214
            +V  V+K   +   K     ++  +LR   HPN+L  LG+          LIT ++P G
Sbjct: 216 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 275

Query: 215 NLKGILSKKVR--LDLPTALRYALDIARNL--------------------LQDEGDHLKI 252
           +L  +L +     +D   A+++ALD+AR +                    + DE    +I
Sbjct: 276 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI 335

Query: 253 GEYWVQ--------MFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQML-- 302
               V+        M+       +   ++ ++++I S        D+ SF  + ++++  
Sbjct: 336 SMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNIRS-------ADMWSFAVLLWELVTR 388

Query: 303 EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
           E      +N    M +      P       P+  K L+  C N+DP+KRP F  ++  LE
Sbjct: 389 EVPFADLSNMEIGMRVALEGLRPTIPPGISPHVCK-LMKICMNEDPAKRPKFDMIVPILE 447

Query: 363 EV 364
           ++
Sbjct: 448 KM 449

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3SWY2|ILK_BOVIN Integrin-linked protein kinase OS=Bos taurus GN=ILK PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 164/417 (39%), Gaps = 77/417 (18%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD---------------QPLTVRNEKDSN 123
                PL  A  +G   +   L  NG    I +               + L  R EK   
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKPPLRELLRERAEKMGQ 157

Query: 124 EVN---------------------------FDISELNTLHSSMVEQGVFGESQTAKWRGT 156
            +N                            D  +LN L  + + +   GE    +W+G 
Sbjct: 158 NLNRIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFL--AKLNENHSGELWKGRWQGN 215

Query: 157 WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI--VLGEEMILITEYLPKG 214
            +V  ++K   +   K     ++  +LR   HPN+L  LG+          LIT ++P G
Sbjct: 216 DIVVKMLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 275

Query: 215 NLKGILSKKVR--LDLPTALRYALDIARNL--------------------LQDEGDHLKI 252
           +L  +L +     +D   A+++ALD+AR +                    + DE    +I
Sbjct: 276 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI 335

Query: 253 GEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK---DICSFGYIFYQML--EGKHL 307
               V+  ++   P +  +             +DT +   D+ SF  + ++++  E    
Sbjct: 336 SMADVKFSFQC--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 393

Query: 308 QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             +N    M +      P       P+  K L+  C N+DP+KRP F  ++  LE++
Sbjct: 394 DLSNMEIGMKVALEGLRPTIPPGISPHVCK-LMKICMNEDPAKRPKFDMIVPILEKM 449

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P57044|ILK_CAVPO Integrin-linked protein kinase OS=Cavia porcellus GN=ILK PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 164/422 (38%), Gaps = 88/422 (20%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD---------------QPLTVRNEKDSN 123
                PL  A  +G   +   L  NG    I +               + L  R EK   
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPMDKAKAPLRELLRERAEKMGQ 157

Query: 124 EVN---------------------------FDISELNTLHSSMVEQGVFGESQTAKWRGT 156
            +N                            D  +LN L  + + +   GE    +W+G 
Sbjct: 158 NLNRIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFL--AKLNENHSGELWKGRWQGN 215

Query: 157 WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI--VLGEEMILITEYLPKG 214
            +V  V+K   +   K     ++  +LR   HPN+L  LG+          LIT ++P G
Sbjct: 216 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 275

Query: 215 NLKGILSKKVR--LDLPTALRYALDIARNL--------------------LQDEGDHLKI 252
           +L  +L +     +D   A+++ALD+AR +                    + DE    +I
Sbjct: 276 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI 335

Query: 253 GEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK---DICSFGYIFYQMLEGKHLQT 309
               V+  ++   P +  +             +DT +   D+ SF  + ++++       
Sbjct: 336 SMADVKFSFQC--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV------- 386

Query: 310 NNSFDFMHLKSVNFEPKFQISRCPN-------RLKQLIAQCTNKDPSKRPTFAAVIITLE 362
                F  L ++    K  +   P         + +L+  C N+DP+KRP F  ++  LE
Sbjct: 387 TREVPFADLSNMEIGMKVALEGRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPILE 446

Query: 363 EV 364
           ++
Sbjct: 447 KM 448

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Cavia porcellus (taxid: 10141)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXE6|AKT6_ARATH Potassium channel AKT6 OS=Arabidopsis thaliana GN=AKT6 PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A+RGD + L+Q+LR G+SPN  D D RTALH+AAS+G    V LLL++ A+ N++D    
Sbjct: 552 AARGDDLLLHQLLRRGSSPNEMDKDGRTALHIAASKGSHYCVVLLLEHGADPNIRDSEGN 611

Query: 83  TPLTDARLYGHRDICRILEVNGGK 106
            PL +A +  HR+I ++L  NG K
Sbjct: 612 VPLWEAIIGRHREIAKLLAENGAK 635

Highly selective inward-rectifying potassium channel that could mediate potassium uptake in the pollen membrane. Plays an important role in pollen tube development. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May interact with the cytoskeleton or with regulatory proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94A76|GORK_ARATH Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 1/94 (1%)

Query: 9   GDFDMQVIGNFL-SFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELL 67
             F+++  GNFL +  ++GD   L ++L  G +PN +DYD RT LH+AASEG   + ++L
Sbjct: 621 ASFNLEDSGNFLCTTVAKGDSDFLKRLLSSGMNPNSEDYDHRTPLHVAASEGLFLMAKML 680

Query: 68  LQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
           ++  A++  KDRW  +PL +ARL G++ + ++LE
Sbjct: 681 VEAGASVISKDRWGNSPLDEARLCGNKKLIKLLE 714

Major selective outward-rectifying potassium channel of the guard cell membrane. Involved in regulation of stomatal movements according to the water status. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by depolarization. Conductance of the channel is modulated in a potassium-dependent fashion. May interact with the cytoskeleton or with regulatory proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q54H45|DRKB_DICDI Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1

 Score = 76.3 bits (186), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 55/264 (20%)

Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           + +G FGE     WRG+ V    + +H  +   +    ++   ++ LRHPN++QFLGS +
Sbjct: 397 IGKGNFGEVYLGTWRGSQVAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCL 456

Query: 200 LGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR------------------ 240
           +  ++ + TEY+P+G+L  IL ++K+++      R  +D A+                  
Sbjct: 457 ISPDICICTEYMPRGSLYSILHNEKIKISWSLVKRMMIDAAKGIIYLHGSTPVILHRDLK 516

Query: 241 --NLLQDEGDHLKIGEYWVQMFYEQ------------IHPNQENSQRNDNSSIASNVLDD 286
             NLL DE   +K+ ++ +    +Q              P    SQR             
Sbjct: 517 SHNLLVDENWKVKVADFGLSTIEQQGATMTACGTPCWTSPEVLRSQRYTE---------- 566

Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE------PKFQISRCPNRLKQLI 340
            K D+ SFG I ++    +         F  + +V  E      PK+     P +  QL+
Sbjct: 567 -KADVYSFGIILWECATRQDPYFGIP-PFQVIFAVGREGMRPPTPKYG----PPKYIQLL 620

Query: 341 AQCTNKDPSKRPTFAAVIITLEEV 364
             C N++PS+RPT    +  LE +
Sbjct: 621 KDCLNENPSQRPTMEQCLEILESI 644

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	464
255574276	414	serine-threonine protein kinase, putativ	0.801	0.898	0.751	1e-169
224069508	374	predicted protein [Populus trichocarpa]	0.784	0.973	0.769	1e-164
359488133	588	PREDICTED: integrin-linked protein kinas	0.788	0.622	0.633	1e-142
224144821	215	predicted protein [Populus trichocarpa]	0.443	0.958	0.834	7e-97
168011131	380	predicted protein [Physcomitrella patens	0.75	0.915	0.361	1e-57
168025436	419	predicted protein [Physcomitrella patens	0.75	0.830	0.345	6e-54
302790345	395	hypothetical protein SELMODRAFT_105905 [	0.743	0.873	0.352	3e-53
168037612	425	predicted protein [Physcomitrella patens	0.743	0.811	0.339	3e-50
2832623	421	protein kinase-like protein [Arabidopsis	0.745	0.821	0.345	4e-50
449433589	460	PREDICTED: probable serine/threonine-pro	0.730	0.736	0.340	7e-50

>gi|255574276|ref|XP_002528052.1| serine-threonine protein kinase, putative [Ricinus communis] gi|223532513|gb|EEF34302.1| serine-threonine protein kinase, putative [Ricinus communis]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 296/394 (75%), Positives = 320/394 (81%), Gaps = 22/394 (5%)

Query: 4   DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
           D   S DFDMQ+IGNFLSFASRGDRVGLNQMLR GTSPNVQDYD+RTALHLAASEGHAPI
Sbjct: 21  DDNCSVDFDMQLIGNFLSFASRGDRVGLNQMLRAGTSPNVQDYDRRTALHLAASEGHAPI 80

Query: 64  VELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
           VELLL YKAN+NLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFI+DQP+TVR+E+DSN
Sbjct: 81  VELLLHYKANVNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFINDQPMTVRHEQDSN 140

Query: 124 EVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL 183
           E+NFDISELNT  +  VEQGVFGES   KWRGTWVVKTVIKS IYHPVKM+L+AK N  L
Sbjct: 141 ELNFDISELNTEQTKTVEQGVFGESVKVKWRGTWVVKTVIKSQIYHPVKMILTAKVNTLL 200

Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---- 239
           RELRHPNILQFLGSIV GEEMILITEYL KGNL  ILS K RLDLPT LRYALDIA    
Sbjct: 201 RELRHPNILQFLGSIVHGEEMILITEYLSKGNLDDILSAKSRLDLPTGLRYALDIARGIN 260

Query: 240 -----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
                            RNLLQDE DHLKIGEYWVQM Y+QIHPNQ+  QR D+ S  SN
Sbjct: 261 YLHEHKPFPIVHNHLDPRNLLQDEADHLKIGEYWVQMLYKQIHPNQDMCQRKDDPSSTSN 320

Query: 283 VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQ 342
             +DTK DI  FG IFYQMLEG+H+ TN  FDF+HLKSV+FEPKFQISRCP R++QLI Q
Sbjct: 321 QSNDTKNDIYRFGLIFYQMLEGRHMMTNMKFDFIHLKSVDFEPKFQISRCPKRIRQLIEQ 380

Query: 343 CTNKDPSKRPTFAAVIITLEEVSACLGRSALCPT 376
           C +KDP  RP+FAAVI  LEEVS  LGR+  CP 
Sbjct: 381 CMSKDPMARPSFAAVIEVLEEVSTSLGRAG-CPV 413

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069508|ref|XP_002302986.1| predicted protein [Populus trichocarpa] gi|222844712|gb|EEE82259.1| predicted protein [Populus trichocarpa]

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/369 (76%), Positives = 322/369 (87%), Gaps = 5/369 (1%)

Query: 8   SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELL 67
           S +FDMQ+IGNFLSFASRGDRVGLNQMLR+G SPNVQDYDKRTALHLAASEGHAPIVELL
Sbjct: 10  SDEFDMQLIGNFLSFASRGDRVGLNQMLRDGISPNVQDYDKRTALHLAASEGHAPIVELL 69

Query: 68  LQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNF 127
           L YKAN+NLKDRWQRTPLTDARLY +RDICRILEVNGGKDFI+D P+T R+E+D  E+NF
Sbjct: 70  LHYKANVNLKDRWQRTPLTDARLYSYRDICRILEVNGGKDFINDHPMTFRHEQDCIEMNF 129

Query: 128 DISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELR 187
           DISELNT  SS+VEQGVFGES   KWRGTWVVKTVIKS IYHPVKM+LSAKDN  LR+L+
Sbjct: 130 DISELNTEQSSIVEQGVFGESVKVKWRGTWVVKTVIKSQIYHPVKMILSAKDNTLLRQLQ 189

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEG 247
           HPNILQFLGSIV  EEMILIT++LPKGNL GIL+ KVRLD+PTALRYALDIARNLL DEG
Sbjct: 190 HPNILQFLGSIVHREEMILITQHLPKGNLDGILTTKVRLDIPTALRYALDIARNLLLDEG 249

Query: 248 DHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL 307
            HLKIG+YWVQM YEQIHPNQ+NSQRND S ++SN  +DTKKDI SFG+IFYQMLEG+ L
Sbjct: 250 GHLKIGDYWVQMLYEQIHPNQDNSQRNDGSIMSSNQSNDTKKDIRSFGFIFYQMLEGRVL 309

Query: 308 QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC 367
            +N +FD    KS +FE +FQISRCPNR++QLI  CT+K+P +RP+F++VI  LEEVSA 
Sbjct: 310 -SNMNFD----KSTDFELRFQISRCPNRIQQLIQHCTSKNPCQRPSFSSVIEILEEVSAY 364

Query: 368 LGRSALCPT 376
           LGR+   P 
Sbjct: 365 LGRAGCSPV 373

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488133|ref|XP_003633706.1| PREDICTED: integrin-linked protein kinase-like [Vitis vinifera]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/426 (63%), Positives = 303/426 (71%), Gaps = 60/426 (14%)

Query: 8   SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELL 67
           S DFDMQ+IG FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHA IVELL
Sbjct: 163 SDDFDMQLIGTFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHASIVELL 222

Query: 68  LQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNF 127
           L Y AN+NL+DRWQ+TPLTDARLYGHRDICRILEV+GG D I+D P+TVR+E+DSNEVNF
Sbjct: 223 LHYSANVNLEDRWQKTPLTDARLYGHRDICRILEVSGGTDSINDNPMTVRHEQDSNEVNF 282

Query: 128 DISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHP-VKMVLSAKDNCKLREL 186
           DISELN  HSS +EQG+FGES+  KWRGTWVVKTVI+  IY   V M+LSAK+N  LREL
Sbjct: 283 DISELNLQHSSKIEQGLFGESEKVKWRGTWVVKTVIRRQIYDDRVTMILSAKENTLLREL 342

Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------ 240
           RHPNILQFLGSIV GEEMILITE+L KGNLK IL KK RLDL T++RYALDIAR      
Sbjct: 343 RHPNILQFLGSIVHGEEMILITEHLSKGNLKTILEKKNRLDLATSVRYALDIARGMNYLH 402

Query: 241 ---------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD 285
                          NLLQDEG HLKIG+YWVQM YE+    Q++ Q    S I SN  +
Sbjct: 403 EHKPSPIVHNHLDLENLLQDEGGHLKIGDYWVQMLYER-QNCQDSCQSISGSGIISNPSN 461

Query: 286 DTKKDICSFGYIFY------------------------------------QMLEGKHLQT 309
            T KDI +FG+IF+                                    QMLEG  +  
Sbjct: 462 GTMKDIYAFGFIFHQPLGFRRNWDIVQGYSGHYRKVSRCSNVTAVAVTFTQMLEGSLMNN 521

Query: 310 NNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG 369
           N S D MHLKS  FEPKF ISRCP R+++LI QC + DPS+ PTFA+VI  LEEVS  LG
Sbjct: 522 NKSPDNMHLKSGEFEPKFYISRCPKRIQELIEQCVSGDPSQTPTFASVIAILEEVSMTLG 581

Query: 370 RSALCP 375
           R A CP
Sbjct: 582 RPA-CP 586

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144821|ref|XP_002336177.1| predicted protein [Populus trichocarpa] gi|222875361|gb|EEF12492.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (925), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 172/206 (83%), Positives = 188/206 (91%)

Query: 8   SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELL 67
           S +FDMQ+IGNFLSFASRGDRVGLNQMLR+G SPNVQDYDKRTALHLAASEGHAPIVELL
Sbjct: 10  SDEFDMQLIGNFLSFASRGDRVGLNQMLRDGISPNVQDYDKRTALHLAASEGHAPIVELL 69

Query: 68  LQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNF 127
           L YKAN+NLKDRWQRTPLTDARLY +RDICRILEVNGGKDFI+D P+T R+E+D  E+NF
Sbjct: 70  LHYKANVNLKDRWQRTPLTDARLYSYRDICRILEVNGGKDFINDHPMTFRHEQDCIEMNF 129

Query: 128 DISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELR 187
           DISELNT  SS+VEQGVFGES   KWRGTWVVKTVIKS IYHPVKM+LSAKDN  LR+L+
Sbjct: 130 DISELNTEQSSIVEQGVFGESVKVKWRGTWVVKTVIKSQIYHPVKMILSAKDNTLLRQLQ 189

Query: 188 HPNILQFLGSIVLGEEMILITEYLPK 213
           HPNILQFLGSIV  EEMILIT++LPK
Sbjct: 190 HPNILQFLGSIVHREEMILITQHLPK 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168011131|ref|XP_001758257.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690713|gb|EDQ77079.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 205/379 (54%), Gaps = 31/379 (8%)

Query: 17  GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL 76
           G  L +AS+G+   L  ML  GTS +  DYD RTALHLAASEGH   V+LLL+Y +++N 
Sbjct: 2   GTLLYYASKGNVPILKHMLDNGTSVDAVDYDGRTALHLAASEGHTAAVKLLLEYGSSVNP 61

Query: 77  KDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLH 136
            DR+  TPL +AR YG+ +IC +L  +GG   + +    V      +E   D +EL+   
Sbjct: 62  CDRFNETPLANARRYGYEEICDLLVASGGFVKVRNSLAVVLPISTLSEYEIDPAELSLEK 121

Query: 137 SSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-LRELRHPNILQFL 195
           +  V +G FGE +  KWRGT V    I SH+    K+V    D    L  LRHPNI+QFL
Sbjct: 122 ARSVGKGAFGEIKIVKWRGTVVAAKTILSHLTSDQKIVKEFVDELALLSRLRHPNIMQFL 181

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
           G++   +  I++TEYLPKG+L   L +K +LD  TA+++ALDIA                
Sbjct: 182 GAVTKTQPFIIVTEYLPKGDLHDYLDRKGKLDALTAVKFALDIAKGMNYLHEHKPDPIVH 241

Query: 240 -----RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---IASNVL----DDT 287
                RNLL  E  +LK+ ++ +    +     ++     +  S   +A  V      D 
Sbjct: 242 RDLKPRNLLLHEAGYLKVADFGLGKLLDASEATKQYLMTGETGSYRYMAPEVFLHKAYDK 301

Query: 288 KKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFE-PKFQISRCPNRLKQLIAQCTN 345
             D+ SF  I +++ E G H +   + D  H ++   + P F ++  P+R+K L+ QC +
Sbjct: 302 SVDVFSFAIIVHELFEGGPHSKFQGAKDIAHFRAKEGKRPSFVVNTYPSRMKDLLKQCWH 361

Query: 346 KDPSKRPTFAAVIITLEEV 364
           +DP+KRP+FA +I+ LE +
Sbjct: 362 QDPTKRPSFATIIVHLEGI 380

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168025436|ref|XP_001765240.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683559|gb|EDQ69968.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/385 (34%), Positives = 201/385 (52%), Gaps = 37/385 (9%)

Query: 16  IGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
           +GN L +AS+G+  G+ ++L +G   +  DYD RTALHLAASEGH  IV+LLL+Y A++N
Sbjct: 10  VGNLLFYASKGNAAGVKKLLDQGMPVDATDYDGRTALHLAASEGHTDIVKLLLEYNADVN 69

Query: 76  LKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQP-LTVRNEKDSNEVNFDISELNT 134
             DR   TPL +A+ Y H++IC+ILE   G   +  +  ++ R     +E    I+ELN 
Sbjct: 70  PIDRNGDTPLANAKEYDHKEICKILEARRGYVKVRSKSHVSHRAIHGLDEFEISIAELNL 129

Query: 135 LHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-LRELRHPNILQ 193
                + +G FGE +  KWRGT V    I + +    ++V    D    L  L HPNI+Q
Sbjct: 130 DQGKFIGKGAFGEIRVVKWRGTVVAAKTITAELSKDPQIVKEFVDELALLANLSHPNIVQ 189

Query: 194 FLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA-------------- 239
           FLG++     M+++TEYLPKG+L  ++ K+ +LD  TA+R+ALDIA              
Sbjct: 190 FLGAVTTQRPMVMVTEYLPKGDLHDLMQKRGKLDAETAIRFALDIARGMNYLHEHKPNAI 249

Query: 240 --------RNLLQDEGDHLKIGEYWVQMFYEQIHPN---------QENSQRNDNSSIASN 282
                   RNLLQ +  HLK+ ++ +    + +  +         +  S R     +  +
Sbjct: 250 VHRDLKPSRNLLQHDAGHLKVADFGLGKLLDPLTADANALYEMTGETGSYRYMAPEVFMH 309

Query: 283 VLDDTKKDICSFGYIFYQMLEGKH---LQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQL 339
              D   D+ SF  I  +M EG++    Q   S      K+    P F     P  +K+L
Sbjct: 310 KHYDKSVDVFSFSIIVQEMFEGQNEQKYQLPKSIAIARAKNQE-RPVFNAQTYPPGMKKL 368

Query: 340 IAQCTNKDPSKRPTFAAVIITLEEV 364
           I +C + +P KRPTF+ VI  LE++
Sbjct: 369 ICECWDMNPRKRPTFSVVIQRLEKI 393

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302790345|ref|XP_002976940.1| hypothetical protein SELMODRAFT_105905 [Selaginella moellendorffii] gi|302797847|ref|XP_002980684.1| hypothetical protein SELMODRAFT_113254 [Selaginella moellendorffii] gi|300151690|gb|EFJ18335.1| hypothetical protein SELMODRAFT_113254 [Selaginella moellendorffii] gi|300155418|gb|EFJ22050.1| hypothetical protein SELMODRAFT_105905 [Selaginella moellendorffii]

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 208/386 (53%), Gaps = 41/386 (10%)

Query: 18  NFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
             L  ASRGD  GL Q LREG + +V DYDKRTALHLAASEGHA  V LL+Q+  +L+ +
Sbjct: 3   KLLYCASRGDVEGLRQALREGVNKDVADYDKRTALHLAASEGHADCVLLLIQHGVDLSPR 62

Query: 78  DRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTL-H 136
           DRW RTPL DAR YGH  IC++LE +   D++    ++   E    E   D  E+  + +
Sbjct: 63  DRWGRTPLADARRYGHMRICKLLEAHEAMDYVMIL-ISFVKESVVPEYEIDPGEIERIGN 121

Query: 137 SSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLS-AKDNCKLRELRHPNILQFL 195
           +  + +G FGE +  KWRGT V    I + +    ++V    ++   L++L HPNI+QFL
Sbjct: 122 NDPIGRGAFGEIRVVKWRGTKVAAKTILTSLLQDKQVVREFVRELVLLQKLHHPNIVQFL 181

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDL--PTALRYALDIAR------------- 240
           G++   E +I+ITEYLPKG+L+ +L +K +  L     L +ALDIAR             
Sbjct: 182 GAVTKQENLIIITEYLPKGDLQALLRRKSKGSLGGKQVLHFALDIARGMNFLHEHKPEPV 241

Query: 241 --------NLLQDEGDHLKIGEYWVQMFYE----------QIHPNQENSQRNDNSSIASN 282
                   N+L D+  HLK+G++ +    +          ++     +S R     +  +
Sbjct: 242 IHRDLKPTNILLDDAGHLKVGDFGLSRLVKASGATVDEVYKMTGETGSSDRYMAPEVFKH 301

Query: 283 VLDDTKKDICSFGYIFYQMLEGKHL--QTNNSFDFMHLKSVN-FEPKFQISRCPNRLKQL 339
              D   D+ SF  I Y+M EG H+  +  N    +  ++ + ++P F  ++ P  +KQL
Sbjct: 302 QSYDKSVDVYSFALIVYEMFEG-HVGNRYENPIHAVEDRARHGYKPAF-TAKYPTNMKQL 359

Query: 340 IAQCTNKDPSKRPTFAAVIITLEEVS 365
           + +C + D  KRP+F  +I  LE++ 
Sbjct: 360 LTRCLDFDAKKRPSFREIIAELEDME 385

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168037612|ref|XP_001771297.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677386|gb|EDQ63857.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 201/380 (52%), Gaps = 35/380 (9%)

Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
            L +AS+ +   L  ML  GT  +  DYD RTALHLAASEGH   V+LLL+Y  ++N   
Sbjct: 1   LLYYASKVNVSILKHMLDNGTPVDAADYDGRTALHLAASEGHTAAVKLLLEYGPSVNPCG 60

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDI--SELNTLH 136
           R+  TPL +A+ Y H+DIC +LEVNGG    H+ P+T+          ++I  +EL    
Sbjct: 61  RFNETPLANAQRYRHKDICDLLEVNGGFTKAHN-PVTLDLGWHDTLSTYEIDPAELCMEK 119

Query: 137 SSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-LRELRHPNILQFL 195
              + +G FGE +  KWRGT V    + SH+    K+V    D    L  LRHPN++QFL
Sbjct: 120 GRSIGKGAFGEIKIFKWRGTAVAAKSLLSHLTSDQKIVKEFVDELALLSRLRHPNVMQFL 179

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
           G++   +  +++TEYLPKG+L   L +  +LD  TA+++ALDIA                
Sbjct: 180 GAVSKSQPFVIVTEYLPKGDLHDYLDRNGKLDALTAVKFALDIAKGMNYLHKHKPDPIVH 239

Query: 240 -----RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---IASNVL----DDT 287
                RNLL  E  +LK+ ++ +    +     Q+     +  S   +A  V      D 
Sbjct: 240 RDLKPRNLLVHEAGYLKVADFGLGKLLDVSEATQQYLMTGETGSYRYMAPEVFLHKAYDK 299

Query: 288 KKDICSFGYIFYQML--EGKHLQTNNSFDFMHLKSVNFE-PKFQISRCPNRLKQLIAQCT 344
             D+ SF  I ++++   G + +   S D  H ++   + P F  +  P ++K L+ +C 
Sbjct: 300 SVDVFSFAVIVHEVIVRSGPYSKFQGSKDIAHFRAKEGKRPTFSANTYPPKMKDLLNECW 359

Query: 345 NKDPSKRPTFAAVIITLEEV 364
           ++DP+KRP+F+ +I+ LE++
Sbjct: 360 HQDPTKRPSFSTLIVHLEDI 379

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2832623|emb|CAA16752.1| protein kinase-like protein [Arabidopsis thaliana] gi|7268689|emb|CAB78897.1| protein kinase-like protein [Arabidopsis thaliana]

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 188/359 (52%), Gaps = 13/359 (3%)

Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
            +  A+ GD  G+ +++  G   N +D D RTALH+AA +G   +VELLL  KA ++ KD
Sbjct: 30  LMYLANEGDIEGIKELIDSGIDANYRDIDDRTALHVAACQGLKDVVELLLDRKAEVDPKD 89

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSS 138
           RW  TP  DA  Y + D+ +ILE++G K  +   P+ V+  ++  E   + SEL+   S 
Sbjct: 90  RWGSTPFADAIFYKNIDVIKILEIHGAKHPM--APMHVKTAREVPEYEINPSELDFTQSK 147

Query: 139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL-RELRHPNILQFLGS 197
            + +G +     A WRG  V    +   +      V    D   L + LRHPNI+QFLG+
Sbjct: 148 EITKGTYC---MAMWRGIQVAVKKLDDEVLSDDDQVRKFHDELALLQRLRHPNIVQFLGA 204

Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWV 257
           +     M+++TEYLP+G+L+ +L +K +L   TA+RYALDIARN+L+D+  HLK+ ++ V
Sbjct: 205 VTQSNPMMIVTEYLPRGDLRELLKRKGQLKPATAVRYALDIARNILRDDSGHLKVADFGV 264

Query: 258 QMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYIFYQMLEGKH-LQTNNS 312
                         Q      IA  V      DTK D+ SF  I  +M+EG+        
Sbjct: 265 SKLVTVKEDKPFTCQDISCRYIAPEVFTSEEYDTKADVFSFALIVQEMIEGRMPFAEKED 324

Query: 313 FDFMHLKSVNFEPKFQI--SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG 369
            +     +    P F+      P+ LK LI +C ++ P+KRPTF  +I  LE +   +G
Sbjct: 325 SEASEAYAGKHRPLFKAPSKNYPHGLKTLIEECWHEKPAKRPTFREIIKRLESILHHMG 383

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433589|ref|XP_004134580.1| PREDICTED: probable serine/threonine-protein kinase drkD-like [Cucumis sativus]

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 196/373 (52%), Gaps = 34/373 (9%)

Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
            +  A+ GD  G+N++L  G   N +D D RTALH+AA +G A +V LLL+  A ++ KD
Sbjct: 45  LMYLANEGDLEGINEVLDSGVDVNFRDIDNRTALHIAACQGFADVVALLLERGAEVDSKD 104

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSS 138
           RW  TPL DA  Y + D+ ++LE +G K  +   P+ V+N ++  +   D  EL+  +S 
Sbjct: 105 RWGSTPLRDAIHYKNHDVIKLLEKHGAKPPV--APMLVKNAREVPDYEIDPKELDFTNSV 162

Query: 139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-LRELRHPNILQFLGS 197
            + +G F   + A WRGT V    +   ++   + V + +D    L+++RHPN++QFLG+
Sbjct: 163 NITKGTF---RRASWRGTEVAVKELGEDLFTDEEKVRAFRDELALLQKIRHPNVVQFLGA 219

Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR----------------- 240
           +     M+++TEYLPKG+L  +LS+K  +   + +R ALDIAR                 
Sbjct: 220 VTQSWPMMIVTEYLPKGDLGALLSRKREIKTMSVVRLALDIARGMNYLHENKPAPIIHRN 279

Query: 241 ----NLLQDEGDHLKIGEYWVQMFY----EQIHPNQENSQRNDNSSIASNVLDDTKKDIC 292
               N+L+D+  HLK+ ++ V        ++     E S+R     +  N   DTK D+ 
Sbjct: 280 LEPSNILRDDSGHLKVADFGVSKLLTVKEDKFSTCSETSRRYQAPEVFKNEEYDTKVDVF 339

Query: 293 SFGYIFYQMLEG-KHLQTNNSFDFMHLKSVNFEPKFQ--ISRCPNRLKQLIAQCTNKDPS 349
           SF  I  +MLEG          +   L +    P F   I R  N LK+LI +C N+ P+
Sbjct: 340 SFALILQEMLEGCSPFPDKADSEVPKLYAAGERPPFGALIKRYANGLKELIEECWNEKPN 399

Query: 350 KRPTFAAVIITLE 362
           KRPTF  +I  LE
Sbjct: 400 KRPTFRQIITQLE 412

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	464
TAIR|locus:2045258	476	AT2G31800 [Arabidopsis thalian	0.474	0.462	0.386	5e-50
TAIR|locus:2044034	479	AT2G43850 [Arabidopsis thalian	0.474	0.459	0.386	1.6e-47
TAIR|locus:2098999	471	AT3G58760 [Arabidopsis thalian	0.497	0.490	0.368	2e-47
TAIR|locus:2080517	477	AT3G59830 [Arabidopsis thalian	0.474	0.461	0.382	2e-43
TAIR|locus:2117129	459	AT4G18950 [Arabidopsis thalian	0.596	0.603	0.345	6.1e-39
TAIR|locus:2014849	438	VIK "VH1-interacting kinase" [	0.471	0.5	0.350	1.2e-38
DICTYBASE|DDB_G0271682	1024	DDB_G0271682 "protein kinase,	0.258	0.117	0.333	2.2e-15
UNIPROTKB|B7Z509	174	GLS "Glutaminase kidney isofor	0.200	0.534	0.404	8.7e-13
UNIPROTKB|B7Z418	391	ILK "cDNA FLJ50979, moderately	0.463	0.549	0.254	1.3e-12
TAIR|locus:2127228	736	AT4G23050 [Arabidopsis thalian	0.303	0.191	0.303	8.4e-12

TAIR|locus:2045258 AT2G31800 [Arabidopsis thaliana (taxid:3702)]

 Score = 396 (144.5 bits), Expect = 5.0e-50, Sum P(3) = 5.0e-50
 Identities = 87/225 (38%), Positives = 126/225 (56%)

Query:    20 LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
             L  A RGD  G+  +L EG   N  D D RTALH+AA EGH  +V+LLL  KAN++ +DR
Sbjct:    80 LFVACRGDVEGVQDLLDEGIDVNSIDLDGRTALHIAACEGHVDVVKLLLTRKANIDARDR 139

Query:    80 WQRTPLTDARLYGHRDICRILEVNGGK-DFIHDQPLTVRNEKDSNEVNFDISELNTLHSS 138
             W  T   DA+ YG+ D+  IL+  G K       P+ V N ++  E   +  EL    + 
Sbjct:   140 WGSTAAADAKYYGNMDVFNILKARGAKVPKTKRTPMVVANPREVPEYELNPQELQVRKAD 199

Query:   139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-LRHPNILQFLGS 197
              + +G++   Q AKW GT V   ++   +Y     + + K    L E +RHPN++QF+G+
Sbjct:   200 GISKGIY---QVAKWNGTKVSVKILDKDLYKDSDTINAFKHELTLFEKVRHPNVVQFVGA 256

Query:   198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
             +     M++++EY PKG+L   L KK RL     LR+ALDIAR +
Sbjct:   257 VTQNVPMMIVSEYHPKGDLGSYLQKKGRLSPAKVLRFALDIARGM 301

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2044034 AT2G43850 [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
 Identities = 87/225 (38%), Positives = 128/225 (56%)

Query:    20 LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
             L  AS+GD  G+ ++L EG   N  D D RTALH+AA EGH  +V+ LL  +AN++ +DR
Sbjct:    83 LFMASKGDVRGIEELLDEGIDVNSIDLDGRTALHIAACEGHLGVVKALLSRRANIDARDR 142

Query:    80 WQRTPLTDARLYGHRDICRILEVNGGK-DFIHDQPLTVRNEKDSNEVNFDISELNTLHSS 138
             W  T   DA+ YG+ D+  +L+  G K       P+TV N ++  E   +  E+    S 
Sbjct:   143 WGSTAAADAKYYGNLDVYNLLKARGAKVPKTRKTPMTVSNPREVPEYELNPLEVQVRKSD 202

Query:   139 MVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
              + +G +   Q AKW GT V VK + K     P ++     +   L ++RHPN++QF+G+
Sbjct:   203 GISKGAY---QVAKWNGTRVSVKILDKDSYSDPERINAFRHELTLLEKVRHPNVIQFVGA 259

Query:   198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
             +     M+++ EY PKG+L   L KK RL    ALR+ALDIAR +
Sbjct:   260 VTQNIPMMIVVEYNPKGDLSVYLQKKGRLSPSKALRFALDIARGM 304

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2098999 AT3G58760 [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
 Identities = 88/239 (36%), Positives = 138/239 (57%)

Query:     5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIV 64
             AA +G  D  +    +  A+ GD  G+N+ML  GT+ + +D D RTALH+AA +G   +V
Sbjct:    41 AATAGIGDPTI--RLMYLANEGDIDGINKMLDSGTNVDYRDIDARTALHVAACQGRTDVV 98

Query:    65 ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNE 124
             ELLL   A ++ KDRW  TPL DA  Y + D+ ++LE +G K  I   P+ V  +K+  E
Sbjct:    99 ELLLSRGAKVDTKDRWGSTPLADAVYYKNHDVIKLLEKHGAKPTI--APMHVLTDKEVPE 156

Query:   125 VNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL- 183
                  +EL+  +S  + +G F +   A WRG  V        ++     V + +D   L 
Sbjct:   157 YEIHPTELDFSNSVKISKGTFNK---ASWRGIDVAVKTFGEEMFTDEDKVNAFRDELALL 213

Query:   184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
             +++RHPN++QFLG++     M+++TEYLPKG+L+  L +K  L    A+++AL+IAR +
Sbjct:   214 QKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRQYLDRKGPLMPAHAVKFALEIARGM 272

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

TAIR|locus:2080517 AT3G59830 [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
 Identities = 86/225 (38%), Positives = 125/225 (55%)

Query:    20 LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
             L  AS+GD  G+ ++L EG   N  D D RTALH+A+ EGH  +V++LL  +AN++ +DR
Sbjct:    81 LFMASKGDVNGVEELLNEGIDVNSIDLDGRTALHIASCEGHYDVVKVLLSRRANIDARDR 140

Query:    80 WQRTPLTDARLYGHRDICRILEVNGGK-DFIHDQPLTVRNEKDSNEVNFDISELNTLHSS 138
             W  T   DA+ YG+ ++  +L+  G K       P+TV N K+  E   +  EL      
Sbjct:   141 WGSTAAVDAKYYGNVEVYNLLKARGAKAPKTRKTPMTVGNPKEVPEYELNPLELQVRKVD 200

Query:   139 MVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
              + +G +   Q AKW GT V VK   K     P ++     +   L + RHPNI+QF+G+
Sbjct:   201 GISKGTY---QVAKWNGTRVSVKIFDKDSYSDPERVNAFTNELTLLAKARHPNIVQFVGA 257

Query:   198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
             +     M+++ E  PKG+L   L KK RL    ALR+ALDIAR +
Sbjct:   258 VTQNLPMMIVVECNPKGDLSVYLQKKGRLSPSKALRFALDIARGM 302

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2117129 AT4G18950 [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 107/310 (34%), Positives = 164/310 (52%)

Query:    23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
             A+ GD  G+ +++  G   N +D D RTALH+AA +G   +VELLL  KA ++ KDRW  
Sbjct:    51 ANEGDIEGIKELIDSGIDANYRDIDDRTALHVAACQGLKDVVELLLDRKAEVDPKDRWGS 110

Query:    83 TPLTDARLYGHRDICRILEVNGGKDFIHDQ-PLTVRNEKDSNEVNFDISELNTLHSSMVE 141
             TP  DA  Y + D+ +ILE++G K   H   P+ V+  ++  E   + SEL+   S  + 
Sbjct:   111 TPFADAIFYKNIDVIKILEIHGAK---HPMAPMHVKTAREVPEYEINPSELDFTQSKEIT 167

Query:   142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL-RELRHPNILQFLGSIVL 200
             +G +     A WRG  V    +   +      V    D   L + LRHPNI+QFLG++  
Sbjct:   168 KGTYC---MAMWRGIQVAVKKLDDEVLSDDDQVRKFHDELALLQRLRHPNIVQFLGAVTQ 224

Query:   201 GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------- 240
                M+++TEYLP+G+L+ +L +K +L   TA+RYALDIAR                    
Sbjct:   225 SNPMMIVTEYLPRGDLRELLKRKGQLKPATAVRYALDIARGMSYLHEIKGDPIIHRDLEP 284

Query:   241 -NLLQDEGDHLKIGEYWVQMFY--EQIHPN--QENSQRNDNSSIASNVLDDTKKDICSFG 295
              N+L+D+  HLK+ ++ V      ++  P   Q+ S R     + ++   DTK D+ SF 
Sbjct:   285 SNILRDDSGHLKVADFGVSKLVTVKEDKPFTCQDISCRYIAPEVFTSEEYDTKADVFSFA 344

Query:   296 YIFYQMLEGK 305
              I  +M+EG+
Sbjct:   345 LIVQEMIEGR 354

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2014849 VIK "VH1-interacting kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
 Identities = 80/228 (35%), Positives = 130/228 (57%)

Query:    23 ASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ 81
             A + D   + ++L E  T  + +DYDKRT LH+A+  G   +V+ LL++ A++N +DRW+
Sbjct:    45 AHQNDAAAVRKLLEEDPTLVHARDYDKRTPLHVASLHGWIDVVKCLLEFGADVNAQDRWK 104

Query:    82 RTPLTDARLYGHRDICRILEVNGGKDF----IHDQPLTVRNEKDSN-EVNFDISELNTLH 136
              TPL DA     + +  +L+ +GG  +     H +P  V        +   + +EL+  +
Sbjct:   105 NTPLADAEGARKQKMIELLKSHGGLSYGQNGSHFEPKPVPPPIPKKCDWEIEPAELDFSN 164

Query:   137 SSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLR-ELRHPNILQF 194
             ++M+ +G FGE   A WRGT V VK ++ S +     ++   +    L  +LRHPNI+QF
Sbjct:   165 AAMIGKGSFGEIVKAYWRGTPVAVKRILPS-LSDDRLVIQDFRHEVDLLVKLRHPNIVQF 223

Query:   195 LGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
             LG++   + ++LITEYL  G+L   L +K  L   TA+ +ALDIAR +
Sbjct:   224 LGAVTERKPLMLITEYLRGGDLHQYLKEKGGLTPTTAVNFALDIARGM 271

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0009734 "auxin mediated signaling pathway" evidence=IMP

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0005829 "cytosol" evidence=RCA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

DICTYBASE|DDB_G0271682 DDB_G0271682 "protein kinase, TKL group" [Dictyostelium discoideum (taxid:44689)]

 Score = 163 (62.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
 Identities = 42/126 (33%), Positives = 71/126 (56%)

Query:   120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAK 178
             +DS ++N   +EL  L    +  G  GE    +W+GT V VKT+ KS +    K     K
Sbjct:   348 EDSLKLNIQENEL--LFIKKIGSGACGEVCQYEWKGTPVAVKTIFKSLLRKDKKEEFE-K 404

Query:   179 DNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYAL 236
             +   L+ LRHPN++ F+G+ +L   + +ITEYL +G+L+ +L+   K  L L   ++  +
Sbjct:   405 EVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVLTTMNKSELSLSVKVKMLI 464

Query:   237 DIARNL 242
             D+A+ +
Sbjct:   465 DVAQGM 470

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B7Z509 GLS "Glutaminase kidney isoform, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 8.7e-13, P = 8.7e-13
 Identities = 38/94 (40%), Positives = 54/94 (57%)

Query:     9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL 68
             GD  ++ + N L  A  GD   L +          +DYD RTALH+AA+EGH  +V+ LL
Sbjct:    52 GDQRVKSVINLLFAAYTGDVSALRRFALSAMDMEQRDYDSRTALHVAAAEGHVEVVKFLL 111

Query:    69 QY-KANLNLKDRWQRTPLTDARLYGHRDICRILE 101
             +  K N   KDRW  TP+ +A  +GH D+ +IL+
Sbjct:   112 EACKVNPFPKDRWNNTPMDEALHFGHHDVFKILQ 145

GO:0002087 "regulation of respiratory gaseous exchange by neurological system process" evidence=IEA

GO:0004359 "glutaminase activity" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0006543 "glutamine catabolic process" evidence=IEA

GO:0007268 "synaptic transmission" evidence=IEA

GO:0007610 "behavior" evidence=IEA

UNIPROTKB|B7Z418 ILK "cDNA FLJ50979, moderately similar to Integrin-linked protein kinase (EC 2.7.11.1)" [Homo sapiens (taxid:9606)]

 Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 60/236 (25%), Positives = 109/236 (46%)

Query:    26 GDRVGLNQMLREGTSPNVQDYDKR--TALHLAASEGHAPIVELLLQYKANLNLKDRWQRT 83
             G+ V +   L + T  ++   D    + LH A  EG + +VE+L+   A +N+ +R   T
Sbjct:    11 GNAVAVRLWL-DNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT 69

Query:    84 PLTDARLYGHRDIC-RILEVNGGKDFIHDQ---PLTVR----NEKDSNEVNFDISELNTL 135
             PL  A  +GHRDI  ++L+     + +++    PL        ++ +       + ++T+
Sbjct:    70 PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAESGQRRWARISTV 129

Query:   136 HSSMVEQG----VFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNC-KLRELRHPN 190
               +    G      G     +W+G  +V  V+K   +   K      + C +LR   HPN
Sbjct:   130 FHTRTHSGRGPPALGPLWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPN 188

Query:   191 ILQFLGSIVL--GEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYALDIARNL 242
             +L  LG+          LIT ++P G+L  +L +     +D   A+++ALD+AR +
Sbjct:   189 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 244

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

TAIR|locus:2127228 AT4G23050 [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
 Identities = 44/145 (30%), Positives = 72/145 (49%)

Query:    99 ILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWV 158
             IL VN G+      P+  RN +   + + +I   +      V +G F       W G+ V
Sbjct:   436 ILGVNSGRQ---QSPVNQRNNRLVTDSSCEIRWEDLQLGEEVGRGSFAAVHRGVWNGSDV 492

Query:   159 VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG 218
                V     Y+ + +    K+   +++LRHPN+L F+G++   E+  +I EY+P+G+L  
Sbjct:   493 AIKVYFDGDYNAMTLTECKKEINIMKKLRHPNVLLFMGAVCTEEKSAIIMEYMPRGSLFK 552

Query:   219 ILSKKVR-LDLPTALRYALDIARNL 242
             IL    + LD    LR ALD+AR +
Sbjct:   553 ILHNTNQPLDKKRRLRMALDVARGM 577

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_II002311 hypothetical protein (374 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	464
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-21
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-19
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-19
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-19
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-14
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-12
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	9e-12
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	9e-12
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-11
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-10
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	9e-10
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-09
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-09
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	9e-09
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-08
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-08
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-08
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	6e-08
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	8e-08
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-07
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	7e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	9e-07
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	9e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-06
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	9e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-05
smart00248	30	smart00248, ANK, ankyrin repeats	2e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-05
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-04
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	6e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-04
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	8e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.001
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.001
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	0.002
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.002
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	0.002
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	0.002
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.002
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	0.003
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.003
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.003
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	0.003
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.003
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	0.004
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	0.004
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.004
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.004
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.004
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 68/254 (26%), Positives = 101/254 (39%), Gaps = 46/254 (18%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG    AK +GT     VK + K       K   + ++   LR L HPNI++ + + 
Sbjct: 9   SGSFGTVYKAKHKGTGKIVAVKILKKRSE-KSKKDQTARREIRILRRLSHPNIVRLIDAF 67

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
              + + L+ EY   G+L   LS+   L    A + AL I R                  
Sbjct: 68  EDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPE 127

Query: 241 NLLQDEGDHLKI---GEYWVQMFYEQIHPNQENSQRNDNSS--IASNVL-----DDTKKD 290
           N+L DE   +KI   G        +++  +  +      +   +A  VL        K D
Sbjct: 128 NILLDENGVVKIADFG------LAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVD 181

Query: 291 ICSFGYIFYQMLEGKHL-QTNNSFDFMHL------KSVNFEPKFQISRCPNRLKQLIAQC 343
           + S G I Y++L GK      N  D + L        + F  + + S      K LI +C
Sbjct: 182 VWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEF-DEPKWSSGSEEAKDLIKKC 240

Query: 344 TNKDPSKRPTFAAV 357
            NKDPSKRPT   +
Sbjct: 241 LNKDPSKRPTAEEI 254

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 87.6 bits (218), Expect = 1e-19
 Identities = 57/250 (22%), Positives = 91/250 (36%), Gaps = 48/250 (19%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FG+   A+ + T     +K + K  I    + +L       L++L+HPNI++     
Sbjct: 9   EGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKI--LKKLKHPNIVRLYDVF 66

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
              +++ L+ EY   G+L  +L K+ RL    A  Y   I                    
Sbjct: 67  EDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPE 126

Query: 241 NLLQDEGDHLKIGEYWVQMF--YEQIHPNQENSQRNDNSSIAS------NVLD----DTK 288
           N+L DE  H+K+ +     F    Q+ P ++       + + +       VL        
Sbjct: 127 NILLDEDGHVKLAD-----FGLARQLDPGEK-----LTTFVGTPEYMAPEVLLGKGYGKA 176

Query: 289 KDICSFGYIFYQMLEGKHL---QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN 345
            DI S G I Y++L GK            F  +                  K LI +   
Sbjct: 177 VDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLV 236

Query: 346 KDPSKRPTFA 355
           KDP KR T  
Sbjct: 237 KDPEKRLTAE 246

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 87.2 bits (217), Expect = 2e-19
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 51/260 (19%)

Query: 142 QGVFGESQTAKWRGTWV-------VKTVIKSHIYHPVKMVLS-AKDNCKLRELRHPNILQ 193
           +G FGE    K +G          VKT+ +      ++  L  A+    +R+L HPN+++
Sbjct: 9   EGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREAR---IMRKLDHPNVVK 65

Query: 194 FLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIA------------- 239
            LG     E + ++ EY+  G+L   L   + +L L   L +AL IA             
Sbjct: 66  LLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIH 125

Query: 240 -----RNLLQDEGDHLKIGEYWVQMF--YEQIHPNQENSQRNDNSSI---ASNVLDD--- 286
                RN L  E   +KI +     F     ++ +    +R     I   A   L +   
Sbjct: 126 RDLAARNCLVGENLVVKISD-----FGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKF 180

Query: 287 -TKKDICSFGYIFYQMLE-GK--HLQTNNSFDFM-HLKSVNFEPKFQISRCPNRLKQLIA 341
            +K D+ SFG + +++   G+  +   +N  + + +LK+    P  Q   CP  L  L+ 
Sbjct: 181 TSKSDVWSFGVLLWEIFTLGEQPYPGMSN-EEVLEYLKNGYRLP--QPPNCPPELYDLML 237

Query: 342 QCTNKDPSKRPTFAAVIITL 361
           QC  +DP  RPTF+ ++  L
Sbjct: 238 QCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 86.8 bits (216), Expect = 3e-19
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 50/259 (19%)

Query: 143 GVFGESQTAKWRGTWV-------VKTVIKSHIYHPVKMVLS-AKDNCKLRELRHPNILQF 194
           G FGE      +G          VKT+ +      ++  L  A+    +R+L HPNI++ 
Sbjct: 10  GAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREAR---IMRKLDHPNIVKL 66

Query: 195 LGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA--LRYALDIA------------- 239
           LG     E ++++ EY+P G+L   L K    +L  +  L +AL IA             
Sbjct: 67  LGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIH 126

Query: 240 -----RNLLQDEGDHLKIGEYWVQMF--YEQIHPNQENSQRNDNSSI---ASNVLDD--- 286
                RN L  E   +KI +     F     ++ +     +     I   A   L +   
Sbjct: 127 RDLAARNCLVGENLVVKISD-----FGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKF 181

Query: 287 -TKKDICSFGYIFYQMLE-GKHLQTN-NSFDFM-HLKSVNFEPKFQISRCPNRLKQLIAQ 342
            +K D+ SFG + +++   G+      ++ + + +LK     P  +   CP  L +L+ Q
Sbjct: 182 TSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLP--KPPNCPPELYKLMLQ 239

Query: 343 CTNKDPSKRPTFAAVIITL 361
           C  +DP  RPTF+ ++  L
Sbjct: 240 CWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 84.6 bits (210), Expect = 7e-19
 Identities = 48/247 (19%), Positives = 86/247 (34%), Gaps = 67/247 (27%)

Query: 142 QGVFGESQTAKWRGTW---VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FG    A+ + T     +K + K      ++ +L  ++   L++L HPNI++  G  
Sbjct: 3   EGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELL--REIEILKKLNHPNIVKLYGVF 60

Query: 199 VLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR----------------- 240
                + L+ EY   G+LK +L   + +L     LR  L I                   
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120

Query: 241 -N-LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS-------IASNVLDDTKKDI 291
            N LL  +   +K+ ++      + +  ++   +    +        +        K DI
Sbjct: 121 ENILLDSDNGKVKLADFG---LSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDI 177

Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
            S G I Y++                                  LK LI +   KDP KR
Sbjct: 178 WSLGVILYEL--------------------------------PELKDLIRKMLQKDPEKR 205

Query: 352 PTFAAVI 358
           P+   ++
Sbjct: 206 PSAKEIL 212

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 34/90 (37%), Positives = 49/90 (54%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           AS G    +  +L  G   N +D D RT LHLAA  GH  IV+LLL+  A++N +D+   
Sbjct: 15  ASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGN 74

Query: 83  TPLTDARLYGHRDICRILEVNGGKDFIHDQ 112
           TPL  A   G+ D+ ++L  +G      D+
Sbjct: 75  TPLHLAARNGNLDVVKLLLKHGADVNARDK 104

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 75.5 bits (186), Expect = 2e-16
 Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++   + + ++L  +G   N +D D  T LHLAA  G+  +V+LLL++ A++N +D
Sbjct: 44  LHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARD 103

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           +  RTPL  A   GH ++ ++L
Sbjct: 104 KDGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 20  LSFASRGDRVGL-NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++   + L   +L +G   N+ D D  TALHLAA  G+  IV+LLL++ A++N KD
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           +   T L  A   G+ +I ++L
Sbjct: 59  KDGNTALHLAARNGNLEIVKLL 80

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N +D D RT LHLAAS GH  +V+LLL+  A++N KD   RTPL  A   GH +I ++L
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLL 59

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 66.4 bits (163), Expect = 3e-12
 Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 38/143 (26%)

Query: 142 QGVFGESQTAKWRGTWV-----------VKTVIKSHIYHPVKMVLS-AKDNCKLRELRHP 189
           +G FGE     ++GT             VKT+ +       +  L  A     +++L HP
Sbjct: 9   EGAFGEV----YKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEAS---IMKKLSHP 61

Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIA--------- 239
           NI++ LG    GE + ++TEY+P G+L   L     +L L   L+ AL IA         
Sbjct: 62  NIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESK 121

Query: 240 ---------RNLLQDEGDHLKIG 253
                    RN L  E   +KI 
Sbjct: 122 NFVHRDLAARNCLVTENLVVKIS 144

Length = 258

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 67.2 bits (164), Expect = 9e-12
 Identities = 31/91 (34%), Positives = 50/91 (54%)

Query: 10  DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ 69
             D  +  N L+ AS G+   L ++L+    P++ D   RT LH+AAS+G+   V +LL+
Sbjct: 520 HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLK 579

Query: 70  YKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +  N++++D    T L +A    H  I RIL
Sbjct: 580 HACNVHIRDANGNTALWNAISAKHHKIFRIL 610

Length = 823

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 65.1 bits (159), Expect = 9e-12
 Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 46/241 (19%)

Query: 158 VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEM-------ILITEY 210
           +++T  K H  H V + ++  +   LR +   NIL+  G I+   ++        LI EY
Sbjct: 47  IIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFII---DIVDDLPRLSLILEY 103

Query: 211 LPKGNLKGILSKKVRLDLPTALRYALDIARNL-------------------LQDEGDHLK 251
             +G L+ +L K+  L   T L  A+D  + L                   L  E   LK
Sbjct: 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLK 163

Query: 252 IGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT------KKDICSFGYIFYQMLEGK 305
           I  +      E+I  +      N     +  +L+D       K DI S G + +++  GK
Sbjct: 164 IICHG----LEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK 219

Query: 306 ----HLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL 361
               +L T   +D +  K  N   K  +  CP  +K ++  CT+ D  KRP    ++  L
Sbjct: 220 IPFENLTTKEIYDLIINK--NNSLKLPLD-CPLEIKCIVEACTSHDSIKRPNIKEILYNL 276

Query: 362 E 362
            
Sbjct: 277 S 277

Length = 283

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 65.7 bits (160), Expect = 2e-11
 Identities = 33/86 (38%), Positives = 50/86 (58%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A+ GD VG   +L  G  PN +DYD RT LH+A + GH  +V +LL++ A+  L D+  +
Sbjct: 90  AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGK 149

Query: 83  TPLTDARLYGHRDICRILEVNGGKDF 108
           TPL  A   G R++ ++L  +    F
Sbjct: 150 TPLELAEENGFREVVQLLSRHSQCHF 175

Length = 664

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.2 bits (152), Expect = 6e-11
 Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 37/148 (25%)

Query: 142 QGVFGESQTAKWR---GTWV---VKTVIKSHIYHPVKMVLS-AKDNCKLRELRHPNILQF 194
           +G FGE    K +   G      VKT+ +       K  L  A+    +++L HPN+++ 
Sbjct: 5   EGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEAR---VMKKLGHPNVVRL 61

Query: 195 LGSIVLGEEMILITEYLPKGNLKGILSKKV---------RLDLPTALRYALDIA------ 239
           LG     E + L+ EY+  G+L   L K            L L   L +A+ IA      
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121

Query: 240 ------------RNLLQDEGDHLKIGEY 255
                       RN L  E   +KI ++
Sbjct: 122 ASKKFVHRDLAARNCLVGEDLVVKISDF 149

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 63/233 (27%)

Query: 183 LRELRHPNILQFLG-SIVLGE-EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G     G   + L+ EYLP G+L+  L K + RLD    L YA  I 
Sbjct: 59  LKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQIC 118

Query: 239 -----------------ARNLLQDEGDHLKIGEYWV-------QMFYEQIHPNQENSQRN 274
                             RN+L +  + +KIG++ +       + +Y+   P +      
Sbjct: 119 KGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGE------ 172

Query: 275 DNSSI---ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMH---------- 317
             S I   A   L ++K     D+ SFG + Y++        +   +FM           
Sbjct: 173 --SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQM 230

Query: 318 --------LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
                   LK+    P      CP  +  ++ +C N DPS+RP+F+ + + +E
Sbjct: 231 IVYHLIELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 44/225 (19%)

Query: 183 LRELRHPNILQFLG--SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           LR L H NI+++ G      G  + LI EYLP G+L+  L + + +++L   L ++  I 
Sbjct: 60  LRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQIC 119

Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                            ARN+L +  D +KI ++ +     +   +    +    S I  
Sbjct: 120 KGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK-DYYYVKEPGESPIFW 178

Query: 280 -ASNVLDDTK----KDICSFGYIFYQMLE-GKHLQT---------NNSFDFM-HLKSVN- 322
            A   L  +K     D+ SFG   Y++   G   Q+           +   M   + +  
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238

Query: 323 FEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            +   ++ R   CP+ +  L+  C   +P  RP+FA +I+ ++ +
Sbjct: 239 LKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 49/209 (23%)

Query: 183 LRELRHPNILQFLGS--IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           L  L+HPNI+++ GS        + +  EY+  G+L  +L K  +L  P   +Y   I  
Sbjct: 53  LSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILE 112

Query: 239 ----------------ARNLLQDEGDHLKIGEY----WVQMFYEQIHPNQENSQRNDNSS 278
                             N+L D    +K+ ++     +           +        S
Sbjct: 113 GLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRL----------GDIETGEGTGS 162

Query: 279 IA-----------SNVLDDTKKDICSFGYIFYQMLEGKH--LQTNNSFDFMHLKSVNFEP 325
           +                     DI S G    +M  GK    +  N    +  K  +   
Sbjct: 163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL-YKIGSSGE 221

Query: 326 KFQI-SRCPNRLKQLIAQCTNKDPSKRPT 353
             +I        K  + +C  +DP KRPT
Sbjct: 222 PPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 52/269 (19%)

Query: 129 ISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRH 188
           I+       + + +G FG+     +RG  V    +K         +  A     +  LRH
Sbjct: 3   INSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEAS---VMTTLRH 59

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI-------- 238
           PN++Q LG ++ G  + ++TEY+ KG+L   L  + R  + L   L +ALD+        
Sbjct: 60  PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119

Query: 239 ----------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-----ASNV 283
                     ARN+L  E    K+ ++ +          +E SQ  D+  +     A   
Sbjct: 120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLA---------KEASQGQDSGKLPVKWTAPEA 170

Query: 284 LDD----TKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSV--NFEPKFQIS---RCP 333
           L +    TK D+ SFG + +++   G+       +  + LK V  + E  +++     CP
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGR-----VPYPRIPLKDVVPHVEKGYRMEAPEGCP 225

Query: 334 NRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
             + +++  C   DP+KRPTF  +   L 
Sbjct: 226 PEVYKVMKDCWELDPAKRPTFKQLREQLA 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 55.0 bits (133), Expect = 9e-10
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 20 LSFASRGDRVG-LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
          L  A+R   +  +  +L  G   N +D D  TALHLAA  G+  IV+LLL++ A++NLKD
Sbjct: 32 LHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 58.9 bits (142), Expect = 9e-10
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 58/262 (22%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 16  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 70

Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRLDLPTALRYALDIARNLLQDE--------- 246
             E + ++TEY+ KG+L    KG + K +RL  P  +  A  IA  +   E         
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMNYVHRDL 128

Query: 247 -------GDHL--KIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD-------DTKKD 290
                  G++L  K+ ++ +    E    N+  +++     I     +         K D
Sbjct: 129 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 185

Query: 291 ICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIA 341
           + SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ 
Sbjct: 186 VWSFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMC 237

Query: 342 QCTNKDPSKRPTFAAVIITLEE 363
           QC  K+P +RPTF  +   LE+
Sbjct: 238 QCWRKEPEERPTFEYLQAFLED 259

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 71/263 (26%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE----------LRHPNI 191
            G FGE     W+    V+  IK         +L + D  K ++          LRH ++
Sbjct: 16  SGYFGEVWEGLWKNR--VRVAIK---------ILKSDDLLKQQDFQKEVQALKRLRHKHL 64

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDI----------- 238
           +       +GE + +ITE + KG+L   L   +   L + + +  A  +           
Sbjct: 65  ISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124

Query: 239 -------ARNLLQDEGDHLKIGEYWV-QMFYEQIHPNQENSQRNDNSSI---------AS 281
                  ARN+L  E    K+ ++ + ++  E ++        + +  I         AS
Sbjct: 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-------LSSDKKIPYKWTAPEAAS 177

Query: 282 NVLDDTKKDICSFGYIFYQML-------EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPN 334
           +    TK D+ SFG + Y+M         G     NN   +  + +    P    ++CP 
Sbjct: 178 HGTFSTKSDVWSFGILLYEMFTYGQVPYPGM----NNHEVYDQITAGYRMPC--PAKCPQ 231

Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
            + +++ +C   +P  RP+F A+
Sbjct: 232 EIYKIMLECWAAEPEDRPSFKAL 254

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 58/275 (21%)

Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
            ++ EL  L +  + +G FG+     +RG  V    IK    +         +   + +L
Sbjct: 3   LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 56

Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
           RH N++Q LG IV  EE   + ++TEY+ KG+L   L  + R  L     L+++LD+   
Sbjct: 57  RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114

Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                          ARN+L  E +  K+ ++ +          +E S   D   +    
Sbjct: 115 MEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 165

Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
            A   L +    TK D+ SFG + +++     +     +  + LK V    E  +++   
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 221

Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             CP  +  ++ QC + D + RP+F  +   LE +
Sbjct: 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 55.9 bits (135), Expect = 9e-09
 Identities = 58/258 (22%), Positives = 99/258 (38%), Gaps = 49/258 (18%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK----LRELRHPNILQFLGS 197
            G FGE     W G W   T +      P  M    KD       +++LRHP ++Q    
Sbjct: 16  AGQFGEV----WEGLWNNTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAV 69

Query: 198 IVLGEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYALDI----------------- 238
             L E + ++TE +  G+L   L       L LP  +  A  +                 
Sbjct: 70  CTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDL 129

Query: 239 -ARNLLQDEGDHLKIGEYWV-QMFYEQIHPNQENS----QRNDNSSIASNVLDDTKKDIC 292
            ARN+L  E +  K+ ++ + ++  E I+  +E +    +     +   N     K D+ 
Sbjct: 130 AARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRF-SIKSDVW 188

Query: 293 SFGYIFYQMLEGKHLQTNNSFDF--MHLKSV--NFEPKFQI---SRCPNRLKQLIAQCTN 345
           SFG +  +++      T     +  M    V    +  +++     CP  L  ++  C  
Sbjct: 189 SFGILLTEIV------TYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWK 242

Query: 346 KDPSKRPTFAAVIITLEE 363
           +DP  RPTF  +   LE+
Sbjct: 243 EDPDDRPTFETLQWKLED 260

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 52/229 (22%)

Query: 183 LRELRHPNILQFLGSIV--LGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           LR L H NI+++ G      G  + LI E+LP G+LK  L + K +++L   L+YA+ I 
Sbjct: 60  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQIC 119

Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE-NSQRNDNSS-- 278
                            ARN+L +    +KIG++ +    + I  ++E  + ++D  S  
Sbjct: 120 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT---KAIETDKEYYTVKDDLDSPV 176

Query: 279 --IASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQISR 331
              A   L  +K     D+ SFG   Y++L   +  + +S   + LK +     +  ++R
Sbjct: 177 FWYAPECLIQSKFYIASDVWSFGVTLYELL--TYCDSESSPMTLFLKMIGPTHGQMTVTR 234

Query: 332 ----------------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                           CP  + QL+ +C    PSKR TF  +I   E +
Sbjct: 235 LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 16/33 (48%), Positives = 23/33 (69%)

Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
          D  T LHLAA  GH  +V+LLL+  A++N +D+
Sbjct: 1  DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 48/256 (18%)

Query: 143 GVFGESQTAKWRG---TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           G +GE     W+    T  VKT+ +  +   V+  L  K+   ++E++HPN++Q LG   
Sbjct: 17  GQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL--KEAAVMKEIKHPNLVQLLGVCT 72

Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLDLP--TALRYALDI------------------A 239
                 +ITE++  GNL   L +  R ++     L  A  I                  A
Sbjct: 73  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 132

Query: 240 RNLLQDEGDHLKIGEYWV-QMFYEQIHPNQENS----QRNDNSSIASNVLDDTKKDICSF 294
           RN L  E   +K+ ++ + ++     +     +    +     S+A N     K D+ +F
Sbjct: 133 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAF 191

Query: 295 GYIF-----YQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNK 346
           G +      Y M     +  +  ++ +       E  +++ R   CP ++ +L+  C   
Sbjct: 192 GVLLWEIATYGMSPYPGIDLSQVYELL-------EKGYRMERPEGCPPKVYELMRACWQW 244

Query: 347 DPSKRPTFAAVIITLE 362
           +PS RP+FA +    E
Sbjct: 245 NPSDRPSFAEIHQAFE 260

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 65/253 (25%), Positives = 101/253 (39%), Gaps = 55/253 (21%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
            G FGE     W GT   K  +K+    P  M   A  ++   +++LRH  ++Q      
Sbjct: 16  AGQFGEVWMGTWNGT--TKVAVKT--LKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS 71

Query: 200 LGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIA------------------ 239
             E + ++TEY+ KG+L   L      +L LP  +  A  IA                  
Sbjct: 72  EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAA 131

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI------ASNVLDDT-KKDIC 292
           RN+L  E    KI ++ +      I  ++  ++      I      A+N    T K D+ 
Sbjct: 132 RNILVGENLVCKIADFGLARL---IEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVW 188

Query: 293 SFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQ 342
           SFG +  +++  G+       +  M     N E   Q+ R         CP  L  L+ Q
Sbjct: 189 SFGILLTEIVTYGR-----VPYPGMT----NREVLEQVERGYRMPRPPNCPEELYDLMLQ 239

Query: 343 CTNKDPSKRPTFA 355
           C +KDP +RPTF 
Sbjct: 240 CWDKDPEERPTFE 252

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 18/46 (39%), Positives = 24/46 (52%)

Query: 40 SPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
            N  D +  T LHLAA  G   +V+ LL+   +LNL+D    T L
Sbjct: 8  DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTAL 53

Length = 56

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 41/203 (20%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR-----------LDLPTA 231
           L++ +HPNI+++ GS +  +E+ ++ E+   G+LK +L    +            +L   
Sbjct: 51  LKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKG 110

Query: 232 LRYA-------LDI-ARN-LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--- 279
           L Y         DI A N LL  +G  +K+ ++ +          Q +  +  N+ +   
Sbjct: 111 LEYLHSNGIIHRDIKAANILLTSDG-EVKLIDFGLS--------AQLSDTKARNTMVGTP 161

Query: 280 ---ASNVLD----DTKKDICSFGYIFYQMLEGKH-LQTNNSFDFMHLKSVNFEPKFQI-S 330
              A  V++    D K DI S G    ++ EGK           +   + N  P  +   
Sbjct: 162 YWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPE 221

Query: 331 RCPNRLKQLIAQCTNKDPSKRPT 353
           +  +  K  + +C  K+P KRPT
Sbjct: 222 KWSDEFKDFLKKCLQKNPEKRPT 244

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.8 bits (117), Expect = 6e-08
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 49  RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           RTALH AA  G   +V+ LL+   ++N  D    T L  A   G+ ++ ++L
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 53.8 bits (129), Expect = 8e-08
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G  P++ + DK + LHLA   G    +ELL+ +KA L+++D    TPL  A   G 
Sbjct: 121 LIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGD 180

Query: 94  RDICRIL 100
             IC++L
Sbjct: 181 IAICKML 187

Length = 413

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 51/219 (23%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYAL----- 236
           +R+  HP+I++ +G ++    + ++ E  P G L+  L   K  LDL + + Y+      
Sbjct: 61  MRQFDHPHIVKLIG-VITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTA 119

Query: 237 ------------DIA-RNLLQDEGDHLKIGEY----WV--QMFYEQ---------IHPNQ 268
                       DIA RN+L    D +K+G++    ++  + +Y+          + P  
Sbjct: 120 LAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPES 179

Query: 269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQ--MLEGKHLQ-TNNSFDFMHLKSVNFEP 325
            N +R  ++S           D+  FG   ++  ML  K  Q   N+     +++    P
Sbjct: 180 INFRRFTSAS-----------DVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLP 228

Query: 326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                 CP  L  L+ +C   DPSKRP F  +   L ++
Sbjct: 229 MPP--NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 52.0 bits (124), Expect = 2e-07
 Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 54/260 (20%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M+  A  ++   +++LRH  ++  L ++V
Sbjct: 16  QGCFGEV----WMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVP-LYAVV 70

Query: 200 LGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIA------------------ 239
             E + ++TE++ KG+L   L +     L LP  +  A  IA                  
Sbjct: 71  SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRA 130

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD-------DTKKDIC 292
            N+L  +    KI ++ +    E    N+  +++     I     +         K D+ 
Sbjct: 131 ANILVGDNLVCKIADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187

Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +++      T     +  +  VN E   Q+ R         CP  L +L+  C
Sbjct: 188 SFGILLTELV------TKGRVPYPGM--VNREVLEQVERGYRMPCPQGCPESLHELMKLC 239

Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 240 WKKDPDERPTFEYIQSFLED 259

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 40/214 (18%)

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTAL-------RYALDI-- 238
           HPNI++ LG  +L E   +I E +  G+L   L           L          LD+  
Sbjct: 58  HPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAK 117

Query: 239 ----------------ARNLLQDEGDH-----LKIGEYWV-QMFYEQIHPNQENSQRNDN 276
                           ARN L  E  +     +KIG++ + +  Y+  +  +E       
Sbjct: 118 GCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPV 177

Query: 277 SSIASNVLDD----TKKDICSFGYIFYQMLEGKH--LQTNNSFDFMHLKSVNFEPKFQIS 330
             +A   L D    T+ D+ SFG + +++L          N+ + +    V    + Q  
Sbjct: 178 RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH--VTAGGRLQKP 235

Query: 331 R-CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
             CP+++ QL+  C  +DPS+RPTF  +   L+ 
Sbjct: 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 51.8 bits (124), Expect = 3e-07
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 42/223 (18%)

Query: 183 LRELRHPNILQFLG--SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           L+ L H NI+++ G  S   G+ + LI EY+P G+L+  L K  +L+L   L +A  I  
Sbjct: 60  LKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICE 118

Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
                           ARN+L D    +KIG++ +     + H      +  D+     A
Sbjct: 119 GMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178

Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
              L + K     D+ SFG   Y++L     + +    F  +                 E
Sbjct: 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238

Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              ++     CP  +  L+  C   +   RPTF ++I  L+E+
Sbjct: 239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.1 bits (123), Expect = 3e-07
 Identities = 48/266 (18%), Positives = 81/266 (30%), Gaps = 47/266 (17%)

Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHP-NILQFLGSI 198
           + +G FGE   A+ R    +K + K       ++    ++   L  L HP NI++     
Sbjct: 8   LGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF 67

Query: 199 VLGEEMILITEYLPKGNLKGILSK---KVRLDLPTALRYALDIARN-------------- 241
                + L+ EY+  G+L+ +L K   K  L    AL     I                 
Sbjct: 68  QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDI 127

Query: 242 -----LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS------------SIASNVL 284
                LL  +G  +K+ ++ +                   S               S   
Sbjct: 128 KPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY 187

Query: 285 DDTKKDICSFGYIFYQMLEGKHLQ--TNNSFDFMHLKSVNFEPKFQISRCPNR------- 335
             +  DI S G   Y++L G        NS        +  E        P         
Sbjct: 188 ASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELI 247

Query: 336 ---LKQLIAQCTNKDPSKRPTFAAVI 358
                 L+ +   KDP  R + ++ +
Sbjct: 248 SKAASDLLKKLLAKDPKNRLSSSSDL 273

Length = 384

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 50.3 bits (120), Expect = 6e-07
 Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 44/243 (18%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
           +G FG     ++ G  V    IK  +     +  +A     + +L H N+++ LG ++L 
Sbjct: 16  EGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAV----MTKLHHKNLVRLLG-VILH 70

Query: 202 EEMILITEYLPKGNLKGILSKKVRLDLPTA--LRYALDI------------------ARN 241
             + ++ E + KGNL   L  + R  +     L+++LD+                  ARN
Sbjct: 71  NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARN 130

Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYI 297
           +L  E    K+ ++ +     ++     ++ +      A   L      +K D+ S+G +
Sbjct: 131 ILVSEDGVAKVSDFGLA----RVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVL 186

Query: 298 FYQMLE-GKHLQTNNSFDFMHLKSVN--FEPKFQIS---RCPNRLKQLIAQCTNKDPSKR 351
            +++   G+       +  M LK V    E  +++     CP  +  L+  C   +P KR
Sbjct: 187 LWEVFSYGRA-----PYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKR 241

Query: 352 PTF 354
           P+F
Sbjct: 242 PSF 244

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 50.4 bits (120), Expect = 7e-07
 Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 38/252 (15%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
            G FGE     W GTW   T +      P  M   +  ++   +++LRH  ++Q L ++V
Sbjct: 16  NGQFGEV----WMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQ-LYAVV 70

Query: 200 LGEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIA------------------ 239
             E + ++TEY+ KG+L   L   +   L LP  +  A  +A                  
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRS 130

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD-------DTKKDIC 292
            N+L  +G   KI ++ +    E    N+  +++     I     +         K D+ 
Sbjct: 131 ANILVGDGLVCKIADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187

Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTNKDPSKR 351
           SFG +  +++    +      +   L+ V    +    + CP  L +L+ QC  KDP +R
Sbjct: 188 SFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEER 247

Query: 352 PTFAAVIITLEE 363
           PTF  +   LE+
Sbjct: 248 PTFEYLQSFLED 259

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 49.8 bits (119), Expect = 9e-07
 Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 35/204 (17%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP----------TAL 232
           L+EL+H NI+Q+LGS +  + + +  EY+P G++  +L+     +              L
Sbjct: 60  LKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGL 119

Query: 233 RYA-------LDI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS------ 278
            Y         DI   N+L D    +KI ++ +    +++  N  +++ N          
Sbjct: 120 NYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS---KKLEANSLSTKTNGARPSLQGSV 176

Query: 279 --IASNVLDDT----KKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISR 331
             +A  V+  T    K DI S G +  +ML GKH   +      +     N  P+   S 
Sbjct: 177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIP-SN 235

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFA 355
             +     + +    D +KRPT A
Sbjct: 236 ISSEAIDFLEKTFEIDHNKRPTAA 259

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 49.4 bits (117), Expect = 9e-07
 Identities = 22/56 (39%), Positives = 31/56 (55%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
            N++D D  T LH AA  G A IVELLL+  A+ N ++ +  T L  A   G  ++
Sbjct: 140 NNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIEL 195

Length = 235

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 54/210 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLP----------TA 231
           +++ +HPNI+ +  S ++G+E+ ++ EY+  G+L  I++   VR++ P            
Sbjct: 69  MKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQG 128

Query: 232 LRYAL--------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--- 279
           L Y L        DI + N+L  +   +K+ ++    F  Q+   +E S+RN   S+   
Sbjct: 129 LEY-LHSQNVIHRDIKSDNILLSKDGSVKLADF---GFAAQL--TKEKSKRN---SVVGT 179

Query: 280 ----ASNVLD----DTKKDICSFGYIFYQMLEGK--HLQTNNSFDF-----MHLKSVNFE 324
               A  V+       K DI S G +  +M EG+  +              + L +    
Sbjct: 180 PYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY------LREPPLRALFLITTKGI 233

Query: 325 PKFQ-ISRCPNRLKQLIAQCTNKDPSKRPT 353
           P  +   +     K  + +C  KDP KRP+
Sbjct: 234 PPLKNPEKWSPEFKDFLNKCLVKDPEKRPS 263

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 46/206 (22%)

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD------LPTALRYAL----- 236
           HPN++++  S V+G+E+ L+  YL  G+L  I+             + T L+  L     
Sbjct: 58  HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117

Query: 237 ---------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI------A 280
                    DI A N+L  E   +KI ++ V           + +++   + +      A
Sbjct: 118 LHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD---GGDRTRKVRKTFVGTPCWMA 174

Query: 281 SNVLD-----DTKKDICSFGYIFYQMLEGK----HLQTNNSFDFMHLKSVNFEPKFQISR 331
             V++     D K DI SFG    ++  G               + L+  N  P  +   
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL-MLTLQ--NDPPSLETGA 231

Query: 332 ----CPNRLKQLIAQCTNKDPSKRPT 353
                    +++I+ C  KDPSKRPT
Sbjct: 232 DYKKYSKSFRKMISLCLQKDPSKRPT 257

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 55/250 (22%)

Query: 153 WRGTWVVKTVIKSHIYHPVKM----VLSAKDNCKLRE------LRHPNILQFLGSIVLGE 202
            RG W   T     I   VK      LS   +  L+E      L H N+++  G +VL  
Sbjct: 12  RRGEW--STSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYG-VVLTH 68

Query: 203 EMILITEYLPKGNLKGILSKKVRLD---LPTALRYALDI------------------ARN 241
            ++++TE  P G+L   L +K  L    + T   YA+ I                  ARN
Sbjct: 69  PLMMVTELAPLGSLLDRL-RKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARN 127

Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--------ASNVLDDTKK-DIC 292
           +L    D +KIG++ +     Q   N+++    ++  +        +      +   D+ 
Sbjct: 128 ILLASDDKVKIGDFGLMRALPQ---NEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVW 184

Query: 293 SFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD 347
            FG   ++M          L   +    +       E   +   CP  +  ++ QC   +
Sbjct: 185 MFGVTLWEMFTYGEEPWAGL---SGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHN 241

Query: 348 PSKRPTFAAV 357
           P+ RPTFAA+
Sbjct: 242 PADRPTFAAL 251

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 77/267 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-------LRELRHPNILQF 194
           +G FG+      +G   V   +K+      +  L      K       L++  HPNI++ 
Sbjct: 5   KGNFGDVYKGVLKGNTEV--AVKT-----CRSTLPPDLKRKFLQEAEILKQYDHPNIVKL 57

Query: 195 LGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALD---------------- 237
           +G  V  + + ++ E +P G+L   L K K RL +   L+ +LD                
Sbjct: 58  IGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHR 117

Query: 238 --IARNLLQDEGDHLKI-----------GEYWVQMFYEQI-----HPNQENSQRNDNSSI 279
              ARN L  E + LKI           G Y V    +QI      P   N  R      
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRY----- 172

Query: 280 ASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-------- 331
                  ++ D+ S+G + ++                     N + + +I          
Sbjct: 173 ------TSESDVWSYGILLWETFSLGDTPYPG--------MSNQQTRERIESGYRMPAPQ 218

Query: 332 -CPNRLKQLIAQCTNKDPSKRPTFAAV 357
            CP  + +L+ QC   DP  RP+F+ +
Sbjct: 219 LCPEEIYRLMLQCWAYDPENRPSFSEI 245

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 48.2 bits (115), Expect = 4e-06
 Identities = 53/229 (23%), Positives = 86/229 (37%), Gaps = 80/229 (34%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----SKKVRLDLPTALRYALDI 238
           L++L HPN++++L S +   E+ ++ E    G+L  ++     +K  +   T  +Y + +
Sbjct: 56  LKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQL 115

Query: 239 ARNL---------------------------LQDEG-----------DHLKIGE-YWVQM 259
              L                           L D G            H  +G  Y+  M
Sbjct: 116 CSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY--M 173

Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLK 319
             E+IH N  N                 K DI S G + Y+M     LQ+    D M+L 
Sbjct: 174 SPERIHENGYN----------------FKSDIWSLGCLLYEMAA---LQSPFYGDKMNLY 214

Query: 320 SVNFEPKFQ-ISRC-----PN-----RLKQLIAQCTNKDPSKRPTFAAV 357
           S+      + I +C     P       L+ L+++C N DP KRP  + V
Sbjct: 215 SL-----CKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 51/213 (23%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI---- 238
           L +L    I+++  S +   ++ ++ EY   G+L  +L  +    LP    +   I    
Sbjct: 53  LAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL 112

Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
                           + NL  D  D++KIG+  V                +DN++ A+ 
Sbjct: 113 GLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLL------------SDNTNFANT 160

Query: 283 VLD---------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN--FEP 325
           ++                + K D+ + G + Y+   GKH    N+   + LK +   F P
Sbjct: 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP 220

Query: 326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
             Q      +L QLI QC  KD  +RP    ++
Sbjct: 221 VSQ--MYSQQLAQLIDQCLTKDYRQRPDTFQLL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLL 68
           L+ G   N +D D RT LHLAA  GH  +V+LLL
Sbjct: 93  LKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 55/261 (21%), Positives = 84/261 (32%), Gaps = 52/261 (19%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHI--YHPVKMVLSAKDN-CKLRELRHPNILQFL 195
           +G F     AK + T   + +K + K  +     VK V   K+   +L    HP I++  
Sbjct: 11  EGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN--GHPGIIKLY 68

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI----------------- 238
            +    E +  + EY P G L   + K   LD      YA +I                 
Sbjct: 69  YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDL 128

Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK-------- 289
              N+L D+  H+KI ++      +     + N     N                     
Sbjct: 129 KPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEY 188

Query: 290 ---------------DICSFGYIFYQMLEGKHL-QTNNSFDFMHLKSVNFEPKFQISRCP 333
                          D+ + G I YQML GK   + +N +     K +  E  F     P
Sbjct: 189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQ-KILKLEYSFP-PNFP 246

Query: 334 NRLKQLIAQCTNKDPSKRPTF 354
              K LI +    DP  R   
Sbjct: 247 PDAKDLIEKLLVLDPQDRLGV 267

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 42/210 (20%), Positives = 79/210 (37%), Gaps = 53/210 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPT----------- 230
           L++L HPNI+++  S     ++ ++ EY   G+L + I  +K                  
Sbjct: 53  LKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL 112

Query: 231 --ALRYAL--------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI 279
             AL+Y L        DI  +N+       +K+G++ +                +    +
Sbjct: 113 CLALKY-LHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVL------------SSTVDL 159

Query: 280 ASNVLD---------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE 324
           A  V+                + K DI S G + Y++   KH     +   + LK +  +
Sbjct: 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ 219

Query: 325 PKFQISRC-PNRLKQLIAQCTNKDPSKRPT 353
               I     + L+ L++    KDP +RP+
Sbjct: 220 YP-PIPSQYSSELRNLVSSLLQKDPEERPS 248

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 56/234 (23%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKVR--------------- 225
           L+++ HP++++  G+      ++LI EY   G+L+  L  S+KV                
Sbjct: 57  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYL 116

Query: 226 -------LDLPTALRYALDI------------------ARNLLQDEGDHLKIGEYWVQM- 259
                  L +   + +A  I                  ARN+L  EG  +KI ++ +   
Sbjct: 117 DNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRD 176

Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-GKH----LQTN 310
            YE+    + +  R     +A   L D    T+ D+ SFG + ++++  G +    +   
Sbjct: 177 VYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236

Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             F+ +        P+     C   +  L+  C  ++P KRPTFA +   LE++
Sbjct: 237 RLFNLLKTGYRMERPE----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLNL 76
          D RT LHLAA  G+  +V+LLL   A++N 
Sbjct: 1  DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 45.9 bits (108), Expect = 2e-05
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 32/196 (16%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR 240
           ++EL++PNI+ FL S ++G+E+ ++ EYL  G+L  ++++       +    R  L    
Sbjct: 70  MKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALE 129

Query: 241 NLLQDEGDHLKIGEYWVQM------------FYEQIHPNQENSQRND--------NSSIA 280
            L  ++  H  I    V +            F  QI P Q  S+R+            + 
Sbjct: 130 FLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVV 187

Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL--- 336
           +      K DI S G +  +M+EG+    N N    ++L + N  P+ Q    P +L   
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSPI 244

Query: 337 -KQLIAQCTNKDPSKR 351
            +  + +C   D  KR
Sbjct: 245 FRDFLNRCLEMDVEKR 260

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 56/226 (24%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR--------LDLPTA--- 231
           ++E    ++++ LG +  G+  +++ E + KG+LK  L  + R        L  PT    
Sbjct: 63  MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSR-RPEAENNPGLGPPTLQKF 121

Query: 232 LRYALDI------------------ARNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQ 272
           ++ A +I                  ARN +  E   +KIG++   +  YE       +  
Sbjct: 122 IQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYET------DYY 175

Query: 273 RNDNSSI------ASNVLDD----TKKDICSFGYIFYQM-----LEGKHLQTNNSFDFMH 317
           R     +      A   L D    TK D+ SFG + ++M        + L       F+ 
Sbjct: 176 RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235

Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
                  P+     CP++L +L+  C   +P  RPTF  ++ +L++
Sbjct: 236 DGGHLDLPE----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 46/203 (22%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
           +RE +HPNI+ +L S ++G+E+ ++ EYL  G+L  ++++    +   A      + R  
Sbjct: 70  MRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-----VCREC 124

Query: 243 LQD--------------EGDHLKIG-EYWVQM----FYEQIHPNQENSQRNDNSS----I 279
           LQ               + D++ +G +  V++    F  QI P Q  S+R+        +
Sbjct: 125 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWM 182

Query: 280 ASNVLDDTKK------DICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRC 332
           A  V+  T+K      DI S G +  +M+EG+    N N    ++L + N  P+ Q    
Sbjct: 183 APEVV--TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ---N 237

Query: 333 PNRL----KQLIAQCTNKDPSKR 351
           P +L    +  + +C   D  KR
Sbjct: 238 PEKLSAIFRDFLNRCLEMDVEKR 260

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 47/223 (21%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-----------------SKKVR 225
           + EL HPNI+  LG +   + + ++ EYL +G+L   L                 + K  
Sbjct: 61  MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSS 120

Query: 226 LDLPTALRYALDIA------------------RNLLQDEGDHLKIGEYWV--QMF---YE 262
           LD    L  A+ IA                  RN+L  E  H+KI +  +  +++   Y 
Sbjct: 121 LDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY 180

Query: 263 QIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN 322
           ++ P      R             +  DI SFG + +++           + F + + + 
Sbjct: 181 RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS---FGLQPYYGFSNQEVIE 237

Query: 323 FEPKFQI----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL 361
              K Q+      CP R+  L+ +C  + PS+RP F  +   L
Sbjct: 238 MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 46/274 (16%)

Query: 137 SSMVEQGVFGESQTAKWRGTW-------VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHP 189
           S ++++G FG                   VKTV        V ++L   ++C L  L H 
Sbjct: 11  SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQ--ESCLLYGLSHQ 68

Query: 190 NILQFLG-SIVLGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALR------YALDI-- 238
           NIL  L   I  GE   ++  Y+  GNLK  L   +    + P AL        A+ I  
Sbjct: 69  NILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC 128

Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQ--MFYEQIHPNQENSQRNDN---- 276
                           ARN + DE   +KI +  +   +F    H   +N  R       
Sbjct: 129 GMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL 188

Query: 277 SSIASNVLDDTKKDICSFGYIFYQM--LEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPN 334
            S+ +     +  D+ SFG + +++  L        + F+        +    Q   CP+
Sbjct: 189 ESLVNKEY-SSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA-QPINCPD 246

Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
            L  ++A C   DP +RP+F+ ++  L +  A L
Sbjct: 247 ELFAVMACCWALDPEERPSFSQLVQCLTDFHAQL 280

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 44.5 bits (105), Expect = 5e-05
 Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 66/229 (28%)

Query: 175 LSAKDNCK-LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR--LDLPTA 231
           L+A++ C+ L+ L HPNI+++  + +  + ++++ EY P G L   + K+    LD  T 
Sbjct: 44  LAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTI 103

Query: 232 LRYALDI------------------ARNLLQDEGDH-LKIGEYWVQMFYEQIHPNQENSQ 272
           L + + I                   +N+L D+    +KIG++ +             S+
Sbjct: 104 LHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGI-------------SK 150

Query: 273 RNDNSSIASNVLD---------------DTKKDICSFGYIFYQMLEGKHLQTNNSFD--- 314
              + S A  V+                + K DI + G + Y++          +F+   
Sbjct: 151 ILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL-----ASLKRAFEAAN 205

Query: 315 ----FMHLKSVNFEPKFQIS-RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                + + S  F P   IS R    L+QLI    N DPSKRP  + ++
Sbjct: 206 LPALVLKIMSGTFAP---ISDRYSPDLRQLILSMLNLDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK---VRLDLPTAL--RYALDI 238
           REL HPN+LQ LG  +     +L+ E+ P G+LK  L      V       +  R A ++
Sbjct: 50  RELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEV 109

Query: 239 ARNLL 243
           A  LL
Sbjct: 110 ASGLL 114

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 15/131 (11%)

Query: 5   AAASGDFDMQVIGNFLSFAS-RGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
           A+ S   D    G+ L  A+ R D   + ++L++G + + +D+   TAL +A +E H  +
Sbjct: 614 ASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDM 670

Query: 64  VELLLQYKANL---NLKDRWQRTPLTD---ARLYGHR----DICRILEVNGGKDFIHDQP 113
           V LL+   A++   N  D +  T L +    R  GH     D     E + G+D    +P
Sbjct: 671 VRLLIMNGADVDKANTDDDFSPTELRELLQKRELGHSITIVDSVPADEPDLGRDG-GSRP 729

Query: 114 LTVRNEKDSNE 124
             ++     N+
Sbjct: 730 GRLQGTSSDNQ 740

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 18 NFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLL 68
            L  A+   R+ L + L E G   N  D D  TALH+AA  G+  +++LLL
Sbjct: 3  TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 31  LNQMLREGTSPNVQDYDKRTALHLAASEGHAP-----IVELLLQYKA---NLNLKDRWQR 82
           +  +L  G   N +D D  T LHLAA  G+ P     + +LLL+  A     NL+D    
Sbjct: 89  VKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN 148

Query: 83  TPLTDARLYGHRDICRIL 100
           TPL  A L G  DI  +L
Sbjct: 149 TPLHWAALNGDADIVELL 166

Length = 235

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 41/244 (16%)

Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
           G FGE     W G +   T +      P  M + A  ++   ++ L+H  +++    +  
Sbjct: 17  GQFGEV----WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 72

Query: 201 GEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------ 240
            E + +ITEY+ KG+L   L      ++ LP  + ++  IA                   
Sbjct: 73  EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 132

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI------ASNVLDDT-KKDICS 293
           N+L  E    KI ++ +    E    N+  ++      I      A N    T K D+ S
Sbjct: 133 NVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 189

Query: 294 FGYIFYQMLE-GK--HLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
           FG + Y+++  GK  +   +NS     L+     P+ +   CP+ L  ++  C  +   +
Sbjct: 190 FGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRME--NCPDELYDIMKTCWKEKAEE 247

Query: 351 RPTF 354
           RPTF
Sbjct: 248 RPTF 251

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYALDIAR 240
           +RE ++PNI+ +L S ++G+E+ ++ EYL  G+L  ++++    +  +    R  L    
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 130

Query: 241 NLLQDEGDHLKIGEYWVQM------------FYEQIHPNQENSQRND--------NSSIA 280
            L  ++  H  I    + +            F  QI P Q  S+R+            + 
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVV 188

Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL--- 336
           +      K DI S G +  +M+EG+    N N    ++L + N  P+ Q    P +L   
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAI 245

Query: 337 -KQLIAQCTNKDPSKR 351
            +  + +C + D  KR
Sbjct: 246 FRDFLNRCLDMDVEKR 261

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 62/285 (21%), Positives = 106/285 (37%), Gaps = 75/285 (26%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
           +G FG+   A+  G  + K   K  +   VKM+   KD+   ++L              +
Sbjct: 25  EGCFGQVVMAEALG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 79

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
           H NI+  LG+      + +I EY  KGNL+  L    R   P  + Y+ DI         
Sbjct: 80  HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDIARVPDEQMT 135

Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE 269
                                        ARN+L  E + +KI ++ +      I   ++
Sbjct: 136 FKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKK 195

Query: 270 NSQ-RNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
            +  R     +A   L D     + D+ SFG + +++  L G     +     F  +   
Sbjct: 196 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 255

Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
               +P    + C N L  ++  C +  PS RPTF  ++  L+ +
Sbjct: 256 HRMDKP----ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 52/223 (23%), Positives = 83/223 (37%), Gaps = 72/223 (32%)

Query: 183 LRELRHPNILQFLGSIVL--GEEMILITEYLPKGNLKGILSK--------------KVRL 226
           LREL+HPNI+++   I+    + + ++ EY   G+L  ++ K              ++  
Sbjct: 53  LRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILT 112

Query: 227 DLPTALRYA------------LDIA-RNLLQDEGDHLKIGEYWV-------QMF------ 260
            L  AL                D+   N+  D  +++K+G++ +         F      
Sbjct: 113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVG 172

Query: 261 ---Y---EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD 314
              Y   EQ+         N  S        D K DI S G + Y++       T  +  
Sbjct: 173 TPYYMSPEQL---------NHMSY-------DEKSDIWSLGCLIYELCALSPPFTARNQL 216

Query: 315 FMHLKSVNFEPKFQISRCPNR----LKQLIAQCTNKDPSKRPT 353
              L S   E KF   R P R    L ++I    N DP KRP+
Sbjct: 217 --QLASKIKEGKF--RRIPYRYSSELNEVIKSMLNVDPDKRPS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITL 361
           CP+ L +L+ QC   DP  RPTF+ ++  L
Sbjct: 229 CPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 58/301 (19%), Positives = 96/301 (31%), Gaps = 81/301 (26%)

Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
                L       + +G FG+   A+  G               VKM+   KD+   ++L
Sbjct: 9   LPRDRLTLGK--PLGEGAFGQVVKAEAVGLDNPNETSTV----AVKML---KDDATEKDL 59

Query: 187 --------------RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTAL 232
                         +H NI+  LG       + ++ EY   GNL+  L  + R       
Sbjct: 60  SDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFL--RARRPPGEYA 117

Query: 233 RYALDI------------------------------------ARNLLQDEGDHLKIGEYW 256
                                                     ARN+L  E   +KI ++ 
Sbjct: 118 SPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFG 177

Query: 257 VQMFYEQIHPNQENSQRNDN----SSIASNVLDD----TKKDICSFGYIFYQM--LEGK- 305
           +      IH      +  +       +A   L D     + D+ SFG + +++  L G  
Sbjct: 178 LA---RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234

Query: 306 --HLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
              +     F    LK      K Q   C   L  L+  C ++ PS+RPTF  ++  L+ 
Sbjct: 235 YPGIPVEELFKL--LKEGYRMEKPQ--NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290

Query: 364 V 364
           +
Sbjct: 291 M 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 56/278 (20%), Positives = 106/278 (38%), Gaps = 63/278 (22%)

Query: 139 MVEQGVFG---ESQTAKWRGTWV---VKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNI 191
           ++ +G FG   E Q ++  G+ +   VKT+ +  H Y  ++  LS  +   +++  HPN+
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLS--EAACMKDFDHPNV 63

Query: 192 LQFLGSIVLGEEM------ILITEYLPKGNLKGIL------SKKVRLDLPTALRYALDIA 239
           ++ +G       +      ++I  ++  G+L   L          +L L T L++ +DIA
Sbjct: 64  MKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIA 123

Query: 240 ------------------RNLLQDEGDHLKIGEY------WVQMFYEQIHPNQENSQRND 275
                             RN +  E   + + ++      +   +Y Q    +   +   
Sbjct: 124 LGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 183

Query: 276 NSSIASNVLDDTKKDICSFGYIFYQMLE---------GKHLQTNNSFDFMHLKSVNFEPK 326
             S+A  V   +K D+ +FG   +++             H   +       LK       
Sbjct: 184 IESLADRVYT-SKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK------- 235

Query: 327 FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            Q   C + L  L+  C   DP  RPTF  +   LE +
Sbjct: 236 -QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 290 DICSFGYIFYQMLEGKH-LQTNNSFDFMHL-KSVNFE--PKFQISRCPNRLKQLIAQCTN 345
           DI S G    +   GK          F  L +++     P           +  I+ C  
Sbjct: 182 DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQ 241

Query: 346 KDPSKRPT 353
           KDP KRP+
Sbjct: 242 KDPKKRPS 249

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 41.3 bits (97), Expect = 6e-04
 Identities = 15/40 (37%), Positives = 26/40 (65%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK 222
           L +L+HPNI+Q+LG+    + + +  E +P G+L  +L K
Sbjct: 56  LSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK 95

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLN 75
          D  T LHLAA  G+  +V+LLL++ A++N
Sbjct: 1  DGNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 43/203 (21%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA---LRYAL--- 236
           L + R P I ++ GS + G ++ +I EY   G+   +L K  +LD       LR  L   
Sbjct: 53  LSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL-KPGKLDETYIAFILREVLLGL 111

Query: 237 -----------DI-ARN-LLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSI-- 279
                      DI A N LL +EGD +K+ ++ V  Q+          ++    N+ +  
Sbjct: 112 EYLHEEGKIHRDIKAANILLSEEGD-VKLADFGVSGQL---------TSTMSKRNTFVGT 161

Query: 280 ----ASNVLD----DTKKDICSFGYIFYQMLEGKH-LQTNNSFDFMHLKSVNFEPKFQIS 330
               A  V+     D K DI S G    ++ +G+  L   +    + L   N  P  + +
Sbjct: 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGN 221

Query: 331 RCPNRLKQLIAQCTNKDPSKRPT 353
           +     K  ++ C NKDP +RP+
Sbjct: 222 KFSKPFKDFVSLCLNKDPKERPS 244

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 41.4 bits (97), Expect = 8e-04
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 34  MLREGTSPNVQDYDK-RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
           +L  G   N++D  K  TALH A       + ELLL Y AN+N+ D+   +PL  A  + 
Sbjct: 153 LLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHY 212

Query: 93  HRDICRILEVNG 104
           ++ I  IL  NG
Sbjct: 213 NKPIVHILLENG 224

Length = 477

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 8e-04
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 38/199 (19%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA-----LRYALD 237
           +RE ++PNI+ +L S ++G+E+ ++ EYL  G+L  ++++    +   A        ALD
Sbjct: 70  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALD 129

Query: 238 I------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
                        + N+L      +K+ ++    F  QI P Q  S+R+           
Sbjct: 130 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQ--SKRSTMVGTPYWMAP 184

Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL 336
            + +      K DI S G +  +M+EG+    N N    ++L + N  P+ Q    P RL
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ---NPERL 241

Query: 337 ----KQLIAQCTNKDPSKR 351
               +  + +C   D  +R
Sbjct: 242 SAVFRDFLNRCLEMDVDRR 260

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 55/251 (21%), Positives = 94/251 (37%), Gaps = 47/251 (18%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHI--YHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           +G FG+    + + T   + +K + K  I     V+  L+ ++   L  + HP I++   
Sbjct: 3   KGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERN--ILSRINHPFIVKLHY 60

Query: 197 SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA-------------R--- 240
           +    E++ L+ EY P G L   LSK+ R     A  YA +I              R   
Sbjct: 61  AFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120

Query: 241 --NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--------IASNVLDDTKKD 290
             N+L D   H+K+ ++ +          +E S     ++        +A  VL      
Sbjct: 121 PENILLDADGHIKLTDFGL---------AKELSSEGSRTNTFCGTPEYLAPEVLLGKGYG 171

Query: 291 IC----SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK 346
                 S G + Y+ML GK          ++ K +    +F         + LI+    K
Sbjct: 172 KAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP-EFLSPEARDLISGLLQK 230

Query: 347 DPSKRPTFAAV 357
           DP+KR      
Sbjct: 231 DPTKRLGSGGA 241

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 36/200 (18%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP---TALRYAL--- 236
           +R+ +HPNI++   S ++G+E+ ++ E+L  G L  I++   R++     T     L   
Sbjct: 70  MRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLAVLKAL 128

Query: 237 -----------DIARN--LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND-------- 275
                      DI  +  LL  +G  +K+ ++    F  Q+  ++E  +R          
Sbjct: 129 SFLHAQGVIHRDIKSDSILLTSDG-RVKLSDFG---FCAQV--SKEVPRRKSLVGTPYWM 182

Query: 276 NSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCP 333
              + S +   T+ DI S G +  +M++G+    N      M     N  PK + + +  
Sbjct: 183 APEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVS 242

Query: 334 NRLKQLIAQCTNKDPSKRPT 353
            RL+  + +   +DP++R T
Sbjct: 243 PRLRSFLDRMLVRDPAQRAT 262

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
           +L  G + N+ D    + LH A    + PIV +LL+  A+ + +D+   TPL
Sbjct: 187 LLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPL 238

Length = 477

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 40/213 (18%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDIAR 240
           +++L+HP +++ L ++V  E + +ITEY+  G+L   L   + ++L +   +  A  IA 
Sbjct: 55  MKQLQHPRLVR-LYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAE 113

Query: 241 ------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--- 279
                             N+L  E    KI ++ +      I  N+  ++      I   
Sbjct: 114 GMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARL---IEDNEYTAREGAKFPIKWT 170

Query: 280 ASNVLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR-- 331
           A   ++      K D+ SFG +  +++    +     +  M    V  N E  +++ R  
Sbjct: 171 APEAINYGTFTIKSDVWSFGILLTEIVTYGRI----PYPGMTNPEVIQNLERGYRMPRPD 226

Query: 332 -CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
            CP  L +L+  C  + P +RPTF  +   LE+
Sbjct: 227 NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 19  FLSFA-SRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           FL +A  +GD   +  +   G   N++D +    +H+A       I++LLL+  A  N+K
Sbjct: 127 FLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186

Query: 78  DRWQRTPLTDARLYGHRDICRILEVNG 104
           D    +PL +A  YG     ++L  +G
Sbjct: 187 DNNGESPLHNAAEYGDYACIKLLIDHG 213

Length = 434

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 31  LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL 90
           +  +L  G   N++D + +T LH A  +G    +++L +Y A++N++D     P+  A  
Sbjct: 107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIK 166

Query: 91  YGHRDICRILEVNGG----KDFIHDQPL 114
           +   DI ++L   G     KD   + PL
Sbjct: 167 HNFFDIIKLLLEKGAYANVKDNNGESPL 194

Length = 434

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 38/204 (18%), Positives = 84/204 (41%), Gaps = 33/204 (16%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIA-- 239
           L++  HPNI++ +G     + + ++ E +  G+    L ++  RL +   ++   + A  
Sbjct: 47  LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAG 106

Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQ-IHPNQENSQRNDNSSIASN 282
                           RN L  E + LKI ++ +    E  ++ +    ++      A  
Sbjct: 107 MEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPE 166

Query: 283 VLD----DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNFEPKFQISRCP 333
            L+     ++ D+ SFG + ++          +L    + + +  + V          CP
Sbjct: 167 ALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPCPEL---CP 222

Query: 334 NRLKQLIAQCTNKDPSKRPTFAAV 357
           + + +L+ +C   DP +RP+F+ V
Sbjct: 223 DAVYRLMERCWEYDPGQRPSFSTV 246

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
           CP+ L +L+  C   DP  RPTF+ ++  LE
Sbjct: 232 CPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 38/209 (18%)

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTALRYAL 236
           HPNI+   G +   + ++++TEY+  G+L   L K       ++L      + + ++Y  
Sbjct: 64  HPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS 123

Query: 237 DI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---ASNVLD 285
           D+        ARN+L +     K+ ++ +    E   P    + R     I   A   + 
Sbjct: 124 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTAPEAIA 182

Query: 286 DTK----KDICSFGYIFYQML---EGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNR 335
             K     D+ S+G + ++++   E  + + +N  D   +K++  E  +++     CP  
Sbjct: 183 YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DV--IKAI--EEGYRLPAPMDCPAA 237

Query: 336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           L QL+  C  KD ++RP F  ++  L+++
Sbjct: 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 38/200 (19%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGN------------------LKGILSKKV 224
           L +   P + ++ GS + G ++ +I EYL  G+                  LK IL    
Sbjct: 56  LSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLD 115

Query: 225 RLDLPTALRYALDIARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASN 282
            L     +   +  A  LL ++GD +K+ ++ V  Q+   QI   + N+       +A  
Sbjct: 116 YLHSEKKIHRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPE 171

Query: 283 VLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE-PKFQ----ISRCP 333
           V+     D+K DI S G    ++ +G+   ++     MH   V F  PK           
Sbjct: 172 VIQQSAYDSKADIWSLGITAIELAKGEPPNSD-----MHPMRVLFLIPKNNPPTLTGEFS 226

Query: 334 NRLKQLIAQCTNKDPSKRPT 353
              K+ I  C NKDPS RPT
Sbjct: 227 KPFKEFIDACLNKDPSFRPT 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 66/222 (29%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS--KKVRLDLP--TALRYALDI 238
           L++L HPN++++L S +   E+ ++ E    G+L  ++   KK +  +P  T  +Y + +
Sbjct: 56  LKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115

Query: 239 AR------------------NLLQDEGDHLKIGEYWVQMFY------------------- 261
                               N+       +K+G+  +  F+                   
Sbjct: 116 CSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 175

Query: 262 EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV 321
           E+IH N  N                 K DI S G + Y+M     LQ+    D M+L S+
Sbjct: 176 ERIHENGYN----------------FKSDIWSLGCLLYEMAA---LQSPFYGDKMNLFSL 216

Query: 322 NFE------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
             +      P         +L++L++ C   DP +RP    V
Sbjct: 217 CQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 44/209 (21%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALD---- 237
           L++  HPNI++ +G     + + ++ E +P G+    L  KK  L     +++ALD    
Sbjct: 46  LKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAG 105

Query: 238 --------------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                          ARN L  E + LKI ++ +          QE+     +S +    
Sbjct: 106 MAYLESKNCIHRDLAARNCLVGENNVLKISDFGMS--------RQEDDGIYSSSGLKQIP 157

Query: 280 ----ASNVLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQIS- 330
               A   L+     ++ D+ S+G + ++             +    + V  E  +++S 
Sbjct: 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV--EKGYRMSC 215

Query: 331 --RCPNRLKQLIAQCTNKDPSKRPTFAAV 357
             +CP+ + +++ +C +  P  RP F+ +
Sbjct: 216 PQKCPDDVYKVMQRCWDYKPENRPKFSEL 244

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 39.5 bits (92), Expect = 0.004
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 31  LNQMLREGTSPNVQDYDKR-TALHLAASEGHAP-IVELLLQYKANLNLKDRWQRTPLTDA 88
           L  +L  G   N + Y    TALH +     +   ++LLL+Y A++N  + ++ TPL+ A
Sbjct: 251 LKLLLEHGVDVNAKSYILGLTALHSSI---KSERKLKLLLEYGADINSLNSYKLTPLSSA 307

Query: 89  RL-YGHRDICRILEVN 103
              Y   +I RIL  N
Sbjct: 308 VKQYLCINIGRILISN 323

Length = 477

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 49/222 (22%), Positives = 82/222 (36%), Gaps = 66/222 (29%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS--KKVRLDLP--TALRYALDI 238
           L++L HPN++++  S +   E+ ++ E    G+L  ++   KK +  +P  T  +Y + +
Sbjct: 56  LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQL 115

Query: 239 AR------------------NLLQDEGDHLKIGEYWVQMFY------------------- 261
                               N+       +K+G+  +  F+                   
Sbjct: 116 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 175

Query: 262 EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV 321
           E+IH N  N                 K DI S G + Y+M     LQ+    D M+L S+
Sbjct: 176 ERIHENGYN----------------FKSDIWSLGCLLYEMAA---LQSPFYGDKMNLYSL 216

Query: 322 NFE------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
             +      P          L+QL+  C N DP KRP    V
Sbjct: 217 CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 287 TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMH--LKSVNF-EPKFQISRCPNRLKQLIA 341
           TK D+ SFG + ++++          +SFD     L+     +P++    CP+ L +++ 
Sbjct: 181 TKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEY----CPDPLYEVML 236

Query: 342 QCTNKDPSKRPTFAAVIITLEEVSAC 367
            C +  P  RPTF+ ++  +E++ + 
Sbjct: 237 SCWHPKPEMRPTFSELVSRIEQIFST 262

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 15/41 (36%), Positives = 27/41 (65%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
           +  L++PNI++ LG  V  + + +ITEY+  G+L   LS++
Sbjct: 71  MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQR 111

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 54/249 (21%)

Query: 153 WRGTWVVKTVIKSHIYHPVKMV----LSAKDNCK----LRELRHPNILQFLGSIVLGEEM 204
           W G W+ K  +       +K +    +S +D  +    + +L HP ++Q  G       +
Sbjct: 21  WLGYWLEKRKVA------IKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPI 74

Query: 205 ILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------------ARNLLQD 245
            L+ E++  G L   L +++ +    T L   LD+                  ARN L  
Sbjct: 75  CLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG 134

Query: 246 EGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---ASNVLD----DTKKDICSFGYIF 298
           E   +K+ ++ +  F   +  +Q  S       +   +  V       +K D+ SFG + 
Sbjct: 135 ENQVVKVSDFGMTRF---VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLM 191

Query: 299 YQML-EGKHLQTNNSFDFMHLKSVN-----FEPKFQISRCPNRLKQLIAQCTNKDPSKRP 352
           +++  EGK    N S   + ++++N     ++P+         + +L+  C  + P  RP
Sbjct: 192 WEVFSEGKTPYENRSNSEV-VETINAGFRLYKPRL----ASQSVYELMQHCWKERPEDRP 246

Query: 353 TFAAVIITL 361
           +F+ ++  L
Sbjct: 247 SFSLLLHQL 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 32/214 (14%)

Query: 172 KMVLSAKDNCK-LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPT 230
           K +    D  K L  L+HPN++++ G  V  E++ +  EY   G L+ +L     LD   
Sbjct: 41  KTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHV 100

Query: 231 ALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHPNQE 269
              Y L +                    N+  D    +K+G++   +  +        + 
Sbjct: 101 IRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV 160

Query: 270 NSQRNDNSSIASNVLDDTKK-------DICSFGYIFYQMLEGKH--LQTNNSFDFM-HLK 319
            S     + +A  V+   K        DI S G +  +M  GK    + +N F  M H+ 
Sbjct: 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG 220

Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
           + +  P     +     K  + +C   DP KRPT
Sbjct: 221 AGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT 254

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	464
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.98
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.98
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.98
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.98
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.98
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.98
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.98
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.98
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.98
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.96
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.93
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.92
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.91
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.91
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.89
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.85
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.84
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.83
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.82
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.82
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.82
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.79
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.75
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.74
PHA02743	166	Viral ankyrin protein; Provisional	99.73
PRK09188	365	serine/threonine protein kinase; Provisional	99.73
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.73
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.72
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.71
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.7
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.69
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.69
PHA02791	284	ankyrin-like protein; Provisional	99.69
PHA02791	284	ankyrin-like protein; Provisional	99.67
PHA02741	169	hypothetical protein; Provisional	99.66
PHA02741	169	hypothetical protein; Provisional	99.66
PHA02736	154	Viral ankyrin protein; Provisional	99.66
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.66
KOG0508	615	consensus Ankyrin repeat protein [General function	99.66
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.65
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.65
PHA02878	477	ankyrin repeat protein; Provisional	99.65
PHA02859	209	ankyrin repeat protein; Provisional	99.65
PHA02875	413	ankyrin repeat protein; Provisional	99.65
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.63
PHA02859	209	ankyrin repeat protein; Provisional	99.63
PHA02874	434	ankyrin repeat protein; Provisional	99.63
PHA02884	300	ankyrin repeat protein; Provisional	99.62
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.61
KOG0514	452	consensus Ankyrin repeat protein [General function	99.61
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.61
PHA02946	446	ankyin-like protein; Provisional	99.61
PHA02875	413	ankyrin repeat protein; Provisional	99.6
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.6
PHA02743	166	Viral ankyrin protein; Provisional	99.6
PHA02884	300	ankyrin repeat protein; Provisional	99.59
PHA02798	489	ankyrin-like protein; Provisional	99.59
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.59
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.58
PHA03095	471	ankyrin-like protein; Provisional	99.58
PHA03095	471	ankyrin-like protein; Provisional	99.58
PHA02878	477	ankyrin repeat protein; Provisional	99.58
PHA02795	437	ankyrin-like protein; Provisional	99.57
KOG0514	452	consensus Ankyrin repeat protein [General function	99.57
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.57
PHA03100	480	ankyrin repeat protein; Provisional	99.57
PHA03100	480	ankyrin repeat protein; Provisional	99.55
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.55
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.54
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.54
KOG0510	929	consensus Ankyrin repeat protein [General function	99.54
KOG0508	615	consensus Ankyrin repeat protein [General function	99.54
PHA02874	434	ankyrin repeat protein; Provisional	99.52
PHA02917	661	ankyrin-like protein; Provisional	99.52
PHA02876	682	ankyrin repeat protein; Provisional	99.52
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.51
PRK12274	218	serine/threonine protein kinase; Provisional	99.51
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.5
PHA02736	154	Viral ankyrin protein; Provisional	99.5
PHA02946	446	ankyin-like protein; Provisional	99.49
PHA02730	672	ankyrin-like protein; Provisional	99.49
PRK14879	211	serine/threonine protein kinase; Provisional	99.48
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.47
PHA02989	494	ankyrin repeat protein; Provisional	99.47
PHA02917	661	ankyrin-like protein; Provisional	99.47
PHA02798	489	ankyrin-like protein; Provisional	99.47
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.46
PHA02989	494	ankyrin repeat protein; Provisional	99.46
PHA02730	672	ankyrin-like protein; Provisional	99.45
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.45
PHA02876	682	ankyrin repeat protein; Provisional	99.45
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.45
PHA02795	437	ankyrin-like protein; Provisional	99.44
KOG0510	929	consensus Ankyrin repeat protein [General function	99.43
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.43
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.42
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.42
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.42
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.41
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.4
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.4
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.39
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.39
PRK10345	210	hypothetical protein; Provisional	99.39
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.36
smart00090	237	RIO RIO-like kinase.	99.34
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.33
PHA02792	631	ankyrin-like protein; Provisional	99.33
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.33
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.33

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-47  Score=365.68  Aligned_cols=237  Identities=24%  Similarity=0.377  Sum_probs=208.3

Q ss_pred             CCCccccccccccccccccccceeeeeEEeEEeCc-eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee
Q 039021          122 SNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGT-WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV  199 (464)
Q Consensus       122 ~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~  199 (464)
                      ...|+++..+  +++++.||+|-||+||.|.|++. .||+|.++.....    .+.|.+| ++|++|+|+|||+++++|.
T Consensus       198 ~d~wei~r~~--l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  198 RDPWEIPREE--LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCT  271 (468)
T ss_pred             cCCeeecHHH--HHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence            5556666554  56679999999999999999976 9999999975333    3467789 9999999999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          200 LGEEMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      .++++||||||++.|+|.++|+.  +..+...+.+.++.|||+                  |||++++..+||+|||||+
T Consensus       272 ~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr  351 (468)
T KOG0197|consen  272 KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLAR  351 (468)
T ss_pred             cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccc
Confidence            98999999999999999999986  578999999999999987                  9999999999999999999


Q ss_pred             hhcccCCCC----cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCc
Q 039021          260 FYEQIHPNQ----ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       260 ~~~~~~~~~----~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~  333 (464)
                      ...+...+.    .-...|.|||.+....++.|||||||||+||||+| |+.||.+.. .+.+..+..+.+.+-| ..||
T Consensus       352 ~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P-~~CP  430 (468)
T KOG0197|consen  352 LIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP-EGCP  430 (468)
T ss_pred             ccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC-CCCC
Confidence            665443322    24678999999999999999999999999999999 999999988 7777777788777755 7799


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ++++++|..||..+|++||||..+...|+.+.
T Consensus       431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  431 DEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             HHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            99999999999999999999999988888774

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.3e-47  Score=369.88  Aligned_cols=236  Identities=21%  Similarity=0.246  Sum_probs=212.6

Q ss_pred             ccccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+....+|..++.||+|||+.||.+++  .|..||+|++.+.......+.+.+.+| ++.++|+|||||++|++|++.++
T Consensus        13 ~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   13 EDPRSKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ecCCcceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence            343445799999999999999999998  499999999998777777888899999 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---  262 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---  262 (464)
                      +|||.|+|+.|+|..++++++++++.+++.|++||+.                  |+||+++.+|||+|||+|..+.   
T Consensus        93 VYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence            9999999999999999999999999999999999986                  9999999999999999999988   


Q ss_pred             ccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          263 QIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       263 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      +...+.||||.|.|||++....++..+||||+||+||-|+.|++||+..........+......+| ..++.++++||.+
T Consensus       173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P-~~ls~~A~dLI~~  251 (592)
T KOG0575|consen  173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP-SHLSAEAKDLIRK  251 (592)
T ss_pred             cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc-cccCHHHHHHHHH
Confidence            445678899999999999999999999999999999999999999999885555444444444444 4689999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +|+.||.+|||+++|+.|-..
T Consensus       252 lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  252 LLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             HhcCCcccCCCHHHHhcCHhh
Confidence            999999999999999998554

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-46  Score=357.38  Aligned_cols=245  Identities=29%  Similarity=0.459  Sum_probs=209.6

Q ss_pred             CCCccccccccccccccccccceeeeeEEeEEeCce-EEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee
Q 039021          122 SNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV  199 (464)
Q Consensus       122 ~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~  199 (464)
                      ...|.+++.+.  .+.+.||+|+||+||+|.|+|+. ||+|++......... .+.|.+| .+|++++|||||+++|++.
T Consensus        33 ~~~~~i~~~~l--~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~  109 (362)
T KOG0192|consen   33 LPEEEIDPDEL--PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACT  109 (362)
T ss_pred             ccceecChHHh--hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            34455665543  44567999999999999999998 999999976555444 7889999 9999999999999999999


Q ss_pred             eCC-ceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh-------------------hhcccCCC-ceeEecch
Q 039021          200 LGE-EMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR-------------------NLLQDEGD-HLKIGEYW  256 (464)
Q Consensus       200 ~~~-~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~-------------------Nill~~~~-~~kl~DFG  256 (464)
                      +.. .++|||||+++|+|.++++.  +..+++..++.++.|||+                   |||++.++ ++||+|||
T Consensus       110 ~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFG  189 (362)
T KOG0192|consen  110 SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFG  189 (362)
T ss_pred             CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCc
Confidence            887 79999999999999999987  689999999999999998                   99999998 99999999


Q ss_pred             hhhhhcc---cCCCCcCCCCcccccccc--cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc-ccCCCCccC
Q 039021          257 VQMFYEQ---IHPNQENSQRNDNSSIAS--NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS-VNFEPKFQI  329 (464)
Q Consensus       257 ~a~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~-~~~~~~~~~  329 (464)
                      +++....   ......||+.|||||++.  ...|+.|+|||||||+||||+||+.||.+.. .+....+. .+.++.++ 
T Consensus       190 lsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p-  268 (362)
T KOG0192|consen  190 LSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP-  268 (362)
T ss_pred             cceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC-
Confidence            9988764   233356999999999999  5699999999999999999999999999987 34444433 44455554 


Q ss_pred             CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       330 ~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ..+++.+..||.+||..||+.||+|.+|+..|+.+......
T Consensus       269 ~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  269 KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            55999999999999999999999999999999988665443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-46  Score=329.60  Aligned_cols=354  Identities=24%  Similarity=0.341  Sum_probs=283.5

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      .++.|.-|+.|.+||||||+.|+..+++.||.+|+.+|..+.-..||||+|+.+||-++|+.|+...+|+|+.|.+|+||
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntp  103 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTP  103 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCc
Confidence            45667789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC----Cccc---------------------------cCcCC----------CC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ----PLTV---------------------------RNEKD----------SN  123 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~----p~~~---------------------------~~~~~----------~~  123 (464)
                      ||||+.+|...+++-|+..|+..++.+.    |+..                           ..++.          ..
T Consensus       104 lhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nripfkdt~wkgtktr~rdatlsr  183 (448)
T KOG0195|consen  104 LHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNRIPFKDTTWKGTKTRTRDATLSR  183 (448)
T ss_pred             hhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCccccccccccccccccccccccc
Confidence            9999999999999999999985443332    2110                           00000          01


Q ss_pred             CccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      --.++...  ..+..+|.+...|+.|+|+|.|..+++|+++..... ....+.|.+| -.|+-+.||||+.+++.|..+.
T Consensus       184 ~~gid~~~--lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnspp  260 (448)
T KOG0195|consen  184 YTGIDVSS--LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPP  260 (448)
T ss_pred             ccCcchhh--hhhhhhhccCCCcccccccccCcchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCC
Confidence            11223232  344568899999999999999999999999864332 2345678889 8999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh--------------------hhcccCCCceeEecchhhhh
Q 039021          203 EMILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR--------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~--------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      ++.++..|++.|+|++++++..  .++..++.+++.++++                    .+++|++.+++|. .+-+++
T Consensus       261 nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kf  339 (448)
T KOG0195|consen  261 NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKF  339 (448)
T ss_pred             CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-ccccee
Confidence            9999999999999999998753  4577888888888887                    5677777776653 111111


Q ss_pred             hcccCCCCcCCCCcccccccccCCCC---CcccchhHHHHHHHHHhCCCCCCCCc-cchhcc-ccccCCCCccCCCCcHH
Q 039021          261 YEQIHPNQENSQRNDNSSIASNVLDD---TKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHL-KSVNFEPKFQISRCPNR  335 (464)
Q Consensus       261 ~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~  335 (464)
                      . -......-.|.||+||.+...+-+   .++|+|||.|++|||.|.+.||.... .+.-.. ...+.++..| +.++..
T Consensus       340 s-fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ip-pgis~h  417 (448)
T KOG0195|consen  340 S-FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP-PGISRH  417 (448)
T ss_pred             e-eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCC-CCccHH
Confidence            1 112233467899999999876655   57999999999999999999999877 443333 3355666665 778999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +..||.-|+..||.+||.|+.|.--|+++
T Consensus       418 m~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  418 MNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            99999999999999999999998888765

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-45  Score=340.28  Aligned_cols=230  Identities=19%  Similarity=0.247  Sum_probs=205.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc-eEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE-MILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~-~~lv~  208 (464)
                      +++..+.||+|..|+||+++++  ++.+|+|++...  .+....+++.+| ++++..+|||||++||+|...+. ++|+|
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m  157 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM  157 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence            5677899999999999999996  889999999543  345667788899 99999999999999999999985 99999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~~  268 (464)
                      |||++|+|.+++..-+++++.....++.++++                   |||++..|.|||||||.++.+.+. ..+.
T Consensus       158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tf  237 (364)
T KOG0581|consen  158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTF  237 (364)
T ss_pred             hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccc
Confidence            99999999999998899999999999999987                   999999999999999999988754 4567


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC-----c-cchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-----S-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      .||..|||||-+.+..|+.++||||||++++|+++|++||...     . .+.+..+..+.+|..|...+|+++++||..
T Consensus       238 vGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~  317 (364)
T KOG0581|consen  238 VGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSC  317 (364)
T ss_pred             cccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHH
Confidence            7999999999999999999999999999999999999999874     1 455566666667777645599999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||++||.+|||+.|+++|.+-.
T Consensus       318 CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  318 CLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             HhcCCcccCCCHHHHhcCHHHh
Confidence            9999999999999999997644

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-46  Score=333.20  Aligned_cols=230  Identities=19%  Similarity=0.309  Sum_probs=196.1

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeec-eeeeCCc-eEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLG-SIVLGEE-MILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~-~~~~~~~-~~lv  207 (464)
                      +|.+.++||+|.||+||++++  +|..||.|.+.-... +.+..+....| .+|++|+|||||++|+ .|.++.. ++||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            689999999999999999997  599999999995443 45567778888 9999999999999999 5555555 8999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh----------------------hhcccCCCceeEecchhhhhh
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR----------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~----------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      ||||.+|||.+.|+.    +..+++..+++++.|+++                      ||+|+.+|.+||+|||+++++
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999999953    578999999999999987                      999999999999999999998


Q ss_pred             cccC---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHH
Q 039021          262 EQIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       262 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ....   .+..|||+||+||.+.+.+|+.||||||+||++|||+.-..||.+.+ .+.-..+..+..++.+....|..+.
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~  258 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLR  258 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHH
Confidence            7543   34559999999999999999999999999999999999999999998 4444444445455555466899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      .||..|+..||+.||+...++..+..
T Consensus       259 ~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  259 ELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHHHHHccCCcccCCCcchHHHHHHH
Confidence            99999999999999986555554433

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-45  Score=339.81  Aligned_cols=227  Identities=23%  Similarity=0.297  Sum_probs=196.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||+||+|+++  +..||||.+.+..+ ..+..+.+..| .+|+.++|||||++++++..++.+|||||
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             cceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            6888899999999999999985  88999999998654 35566777888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC------CceeEecchhhhhhcc--
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG------DHLKIGEYWVQMFYEQ--  263 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~------~~~kl~DFG~a~~~~~--  263 (464)
                      ||.||||.+||+.++.+++..++.++.|||.                  ||||+..      -.+||+|||+|+.+..  
T Consensus        90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~  169 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS  169 (429)
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence            9999999999999999999999999999987                  9999765      3589999999999874  


Q ss_pred             cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc-cCCCCccCCCCcHHHHHHHH
Q 039021          264 IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV-NFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       264 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~  341 (464)
                      ...+.+|++.|||||++..+.|+.|+|+||+|+++|+|++|+.||...+ .+....... ....+..+..++..+.+++.
T Consensus       170 ~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~  249 (429)
T KOG0595|consen  170 MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLI  249 (429)
T ss_pred             HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhh
Confidence            3467789999999999999999999999999999999999999999887 333333322 22233333556777789999


Q ss_pred             HHcccCCCCCCCHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ..++.+|..|-++.+-..+
T Consensus       250 ~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  250 SLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             HHHhcCccccCchHHhhhh
Confidence            9999999999888877665

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-44  Score=333.80  Aligned_cols=230  Identities=20%  Similarity=0.221  Sum_probs=204.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||+|+.++.+  ++.+|+|++++......+..+....| .+|.+++||+||+++..|++.+.+|||+
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl  104 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL  104 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence            37999999999999999999974  89999999999887777788889999 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~  267 (464)
                      ||+.||+|+.+|.+.+.+++..+..|+..|+.                  |||||.+|++||+|||+++....   ...+
T Consensus       105 d~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~t  184 (357)
T KOG0598|consen  105 DYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRT  184 (357)
T ss_pred             eccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcccc
Confidence            99999999999999999999999999999975                  99999999999999999996542   3345


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .+||+.|||||++.+..|+..+|+||+||++|||++|.+||.+.+...+...+...+...++..++++.+++++++|..|
T Consensus       185 fcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rd  264 (357)
T KOG0598|consen  185 FCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRD  264 (357)
T ss_pred             ccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccC
Confidence            68999999999999999999999999999999999999999999855544444444534444558999999999999999


Q ss_pred             CCCCC----CHHHHHHHH
Q 039021          348 PSKRP----TFAAVIITL  361 (464)
Q Consensus       348 p~~Rp----t~~~i~~~l  361 (464)
                      |++|.    .+.+|.+|.
T Consensus       265 p~~RLg~~~d~~~ik~Hp  282 (357)
T KOG0598|consen  265 PRQRLGGPGDAEEIKRHP  282 (357)
T ss_pred             HHHhcCCCCChHHhhcCc
Confidence            99995    577777663

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=8.8e-45  Score=365.90  Aligned_cols=234  Identities=21%  Similarity=0.297  Sum_probs=203.8

Q ss_pred             cccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ...+....+.||+|+||+||+|+..       ...||||.++..  .+.+..++|++| ++|..|+|||||+|+|+|.++
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            3335566689999999999999873       457999999975  335578899999 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc----------c----CCCHHHHHHHHHHHHh------------------hhcccCCCc
Q 039021          202 EEMILITEYLPKGNLKGILSKK----------V----RLDLPTALRYALDIAR------------------NLLQDEGDH  249 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~----------~----~l~~~~~~~~~~qi~~------------------Nill~~~~~  249 (464)
                      +++++|+|||..|||.++|+.+          .    +|+..+.+.|+.|||.                  |+|+.++..
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~  641 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV  641 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence            9999999999999999999643          2    3889999999999986                  999999999


Q ss_pred             eeEecchhhhhhcccCCCCc-----CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhcccccc
Q 039021          250 LKIGEYWVQMFYEQIHPNQE-----NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVN  322 (464)
Q Consensus       250 ~kl~DFG~a~~~~~~~~~~~-----gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~  322 (464)
                      |||+||||++.+........     -.++||+||.+..+.|+.+||||||||+|||+++ |+.||.+.. .+.+..+..+
T Consensus       642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g  721 (774)
T KOG1026|consen  642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG  721 (774)
T ss_pred             EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC
Confidence            99999999998876554443     3679999999999999999999999999999999 999999987 6666666655


Q ss_pred             CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       323 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ....- +..||.++++||..||+.+|.+||+|+||-..|+....
T Consensus       722 ~lL~~-Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  722 QLLSC-PENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             CcccC-CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            44333 37899999999999999999999999999999988753

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.7e-45  Score=337.19  Aligned_cols=232  Identities=17%  Similarity=0.172  Sum_probs=196.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCch----HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP----VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~----~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .|.+.+.||+|+||.|.+|..+  |+.||||++++.....    ........+| ++|++|+|||||+++++|+.++..|
T Consensus       173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y  252 (475)
T KOG0615|consen  173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY  252 (475)
T ss_pred             eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence            4888999999999999999984  9999999998765433    1123345789 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcc-
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQ-  263 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~-  263 (464)
                      |||||+.||+|++.+-.++.+.+..-..+++|++.                  |||+..+   -.+||+|||+|+..+. 
T Consensus       253 mVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~  332 (475)
T KOG0615|consen  253 MVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG  332 (475)
T ss_pred             EEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccc
Confidence            99999999999999999999999999999999986                  9999766   5699999999999964 


Q ss_pred             -cCCCCcCCCCcccccccccCCC---CCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccCCCCccC---CCCcHH
Q 039021          264 -IHPNQENSQRNDNSSIASNVLD---DTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNFEPKFQI---SRCPNR  335 (464)
Q Consensus       264 -~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~  335 (464)
                       -..+.||||.|.|||++.++.+   ..++|+||+||+||-+++|.+||.....+. +...+...+..+.+   ..++++
T Consensus       333 sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Isee  412 (475)
T KOG0615|consen  333 SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEE  412 (475)
T ss_pred             eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHH
Confidence             4567889999999999987554   348899999999999999999999876322 33333222323222   568999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ..+||.+||..||++|||+.|+++|.|.-
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            99999999999999999999999998854

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=5e-44  Score=318.70  Aligned_cols=229  Identities=21%  Similarity=0.249  Sum_probs=208.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|+..+.||.|+||.|.+++.+  |..+|+|++.+.....-++.+...+| ++|+.+.||+++++++.|.+.+.+|||||
T Consensus        45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme  124 (355)
T KOG0616|consen   45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME  124 (355)
T ss_pred             hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence            7888999999999999999985  88999999998877777888889999 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      |++||.|+.++++.+++++..++.|+.||+.                  |||||.+|.+||.|||+|+.+.....+.|||
T Consensus       125 yv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGT  204 (355)
T KOG0616|consen  125 YVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGT  204 (355)
T ss_pred             ccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCC
Confidence            9999999999999999999999999999975                  9999999999999999999999888889999


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      |.|+|||++...+|+.++|.|||||++|||+.|.+||...+...+..++......+| +.+++.+++|++++|+.|-.+|
T Consensus       205 PeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP-~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  205 PEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP-SYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             ccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC-cccCHHHHHHHHHHHhhhhHhh
Confidence            999999999999999999999999999999999999999886555555555667776 6689999999999999999999


Q ss_pred             C-----CHHHHHHHHH
Q 039021          352 P-----TFAAVIITLE  362 (464)
Q Consensus       352 p-----t~~~i~~~l~  362 (464)
                      .     ...+|..|-|
T Consensus       284 ~gnlknG~~dIk~H~w  299 (355)
T KOG0616|consen  284 FGNLKNGVEDIKNHPW  299 (355)
T ss_pred             hcCcCCCccccccCcc
Confidence            3     3445655544

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-42  Score=320.85  Aligned_cols=229  Identities=17%  Similarity=0.235  Sum_probs=205.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      -+|++.+.||+|.||+|.+|+.+  |+.||||.++++.+.++.....+++| +||+.|+||||+++|.+|+..+.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            36999999999999999999974  99999999999999888889999999 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~  268 (464)
                      ||..+|+|++|+.+++.|++.++++|++||..                  |||+|.++++||+|||++..+.+..  .++
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF  212 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF  212 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence            99999999999999999999999999999975                  9999999999999999999887554  578


Q ss_pred             cCCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCccch-hccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDD-TKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ||++.|.+||++.+.+|. ..+|-|||||+||-|+.|..||.+.+... +..+..+..   ..+.-|..+.-||++||..
T Consensus       213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY---rEP~~PSdA~gLIRwmLmV  289 (668)
T KOG0611|consen  213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY---REPETPSDASGLIRWMLMV  289 (668)
T ss_pred             cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc---cCCCCCchHHHHHHHHHhc
Confidence            899999999999999995 78999999999999999999999988433 333333222   2233567789999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEE  363 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~  363 (464)
                      ||++|.|+.+|..|-|-
T Consensus       290 NP~RRATieDiAsHWWv  306 (668)
T KOG0611|consen  290 NPERRATIEDIASHWWV  306 (668)
T ss_pred             CcccchhHHHHhhhhee
Confidence            99999999999999653

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-42  Score=328.14  Aligned_cols=229  Identities=21%  Similarity=0.289  Sum_probs=204.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|.+++.||+|+|++|++|+.+  ++.||||++.+..+..++....+..| .+|.+| .||.||+||-.|++...+|+|
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            47999999999999999999984  89999999998776666667778889 999999 899999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      +||+++|+|.++|++.+.|++..++.|+.||+.                  |||||++|++||.|||.|+.+....    
T Consensus       153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~  232 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE  232 (604)
T ss_pred             EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc
Confidence            999999999999999999999999999999986                  9999999999999999999875211    


Q ss_pred             ------------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCc
Q 039021          266 ------------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       266 ------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (464)
                                  ..+.||..|.+||++.+...+..+|+|+||||||+|+.|.+||.+.+.-.+...+......|+ ..+|
T Consensus       233 ~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp-~~fp  311 (604)
T KOG0592|consen  233 NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP-EGFP  311 (604)
T ss_pred             CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC-CCCC
Confidence                        224599999999999999999999999999999999999999999884444444433445555 6689


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+.+||+++|..||.+|+|..+|.+|.
T Consensus       312 ~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  312 EDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             HHHHHHHHHHHccCccccccHHHHhhCc
Confidence            9999999999999999999999999985

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-42  Score=331.96  Aligned_cols=233  Identities=21%  Similarity=0.311  Sum_probs=199.5

Q ss_pred             CCCCCccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeecee
Q 039021          120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSI  198 (464)
Q Consensus       120 ~~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~  198 (464)
                      .....|+|.+.++  .-++-||.|+-|.||+|+.+++.||||.++.-          -..+ .-|++|+|||||.|.|+|
T Consensus       114 qq~e~WeiPFe~I--sELeWlGSGaQGAVF~Grl~netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVC  181 (904)
T KOG4721|consen  114 QQEELWEIPFEEI--SELEWLGSGAQGAVFLGRLHNETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVC  181 (904)
T ss_pred             hhhhhccCCHHHh--hhhhhhccCcccceeeeeccCceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeee
Confidence            3445678777654  34578999999999999999999999987741          1123 679999999999999999


Q ss_pred             eeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       199 ~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      .....+|||||||..|-|.++|+....++......|..+||.                  ||||..+..|||+|||-++.
T Consensus       182 tqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e  261 (904)
T KOG4721|consen  182 TQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKE  261 (904)
T ss_pred             cCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHh
Confidence            999999999999999999999999999999999999999986                  99999999999999999998


Q ss_pred             hcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCcc-CCCCcHHHH
Q 039021          261 YEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ-ISRCPNRLK  337 (464)
Q Consensus       261 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  337 (464)
                      ..+..  ..++||..|||||++...+.+.|+|||||||+||||+||+.||.+.+...+.+-.......++ +..||+-++
T Consensus       262 ~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~Gfk  341 (904)
T KOG4721|consen  262 LSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFK  341 (904)
T ss_pred             hhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHH
Confidence            87653  345699999999999999999999999999999999999999998774433333322222222 367999999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      -||++||...|.+||+|++|+.||+-.
T Consensus       342 lL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  342 LLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             HHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            999999999999999999999998654

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-42  Score=335.89  Aligned_cols=230  Identities=20%  Similarity=0.246  Sum_probs=202.8

Q ss_pred             cccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +++++.||.|+-|.|.+|++  +|+.+|||++.+...........+.+| -+|+-+.||||+++|+++++..++|+|.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            56779999999999999998  599999999987643444455678888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc--ccCCCCcC
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE--QIHPNQEN  270 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~--~~~~~~~g  270 (464)
                      ++||.|++++.+++++++.+++++++||+.                  |+|||..+++||+|||||..-.  ....+.||
T Consensus        94 v~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCG  173 (786)
T KOG0588|consen   94 VPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCG  173 (786)
T ss_pred             cCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCC
Confidence            999999999999999999999999999975                  9999999999999999998654  34568899


Q ss_pred             CCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          271 SQRNDNSSIASNVLDD-TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      ++.|.+||++.+.+|+ .++||||.|||||.|++|+.||.+.+...+..+........| ..+|.++.+||++||..||+
T Consensus       174 SPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP-s~Is~eaQdLLr~ml~VDp~  252 (786)
T KOG0588|consen  174 SPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP-SNISSEAQDLLRRMLDVDPS  252 (786)
T ss_pred             CcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-CcCCHHHHHHHHHHhccCcc
Confidence            9999999999999996 789999999999999999999998885444444433344444 77899999999999999999


Q ss_pred             CCCCHHHHHHHHHHH
Q 039021          350 KRPTFAAVIITLEEV  364 (464)
Q Consensus       350 ~Rpt~~~i~~~l~~~  364 (464)
                      +|.|+.||++|.+-.
T Consensus       253 ~RiT~~eI~kHP~l~  267 (786)
T KOG0588|consen  253 TRITTEEILKHPFLS  267 (786)
T ss_pred             ccccHHHHhhCchhh
Confidence            999999999997644

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=5.7e-41  Score=319.97  Aligned_cols=238  Identities=21%  Similarity=0.286  Sum_probs=199.6

Q ss_pred             ccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee----C
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL----G  201 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~----~  201 (464)
                      ++..+++......||+|++|.||+|.++|+.||+|.++..........+.+.+| .+|++++|||||++++++.+    .
T Consensus        15 i~~~~i~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~   94 (283)
T PHA02988         15 IESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL   94 (283)
T ss_pred             cCHHHcCCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCC
Confidence            444444544457899999999999999999999999987544444456778899 99999999999999999877    3


Q ss_pred             CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      ..+++||||+++|+|.+++.+.+.+++.....++.|++.                   |||+++++.+||+|||+++...
T Consensus        95 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~  174 (283)
T PHA02988         95 PRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS  174 (283)
T ss_pred             CceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence            468999999999999999988888999999999998876                   9999999999999999999776


Q ss_pred             ccCCCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc-ccCCCCccCCCCcHHHHH
Q 039021          263 QIHPNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS-VNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       263 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~  338 (464)
                      .......|+..|+|||++.+  ..++.++|||||||++|||++|+.||.+... +...... .+.++..+ ..+|+++.+
T Consensus       175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~l~~  253 (283)
T PHA02988        175 SPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP-LDCPLEIKC  253 (283)
T ss_pred             cccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC-CcCcHHHHH
Confidence            55555668999999999976  6889999999999999999999999988763 3222222 22233333 468999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      |+.+||+.||++|||+++++..|+.+.
T Consensus       254 li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        254 IVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            999999999999999999999998764

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3.4e-42  Score=330.13  Aligned_cols=226  Identities=20%  Similarity=0.254  Sum_probs=199.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|+.+  .+.||+|.+.+.... ++....+++| ++++.++|||||.++++|+...++++|+|
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            6888999999999999999975  789999999876533 5567788999 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      ||.| +|+.+|...+.++++.+..++.|++.                  |||++.+|++|+||||+|+......   ...
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence            9987 99999999999999999999999976                  9999999999999999999876432   334


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      .|||.|||||+..+..|+..+|.||+||++|||++|++||...........+...++.++ ...+..+..|+..+|.+||
T Consensus       161 kGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p-~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP-STASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             cCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc-ccccHHHHHHHHHHhhcCh
Confidence            599999999999999999999999999999999999999988874333333334445544 5789999999999999999


Q ss_pred             CCCCCHHHHHHHH
Q 039021          349 SKRPTFAAVIITL  361 (464)
Q Consensus       349 ~~Rpt~~~i~~~l  361 (464)
                      .+|.|..+++.|.
T Consensus       240 ~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  240 AQRLTWTDLLGHP  252 (808)
T ss_pred             hhcccHHHHhcCh
Confidence            9999999999983

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-41  Score=354.05  Aligned_cols=238  Identities=22%  Similarity=0.345  Sum_probs=204.2

Q ss_pred             cccccccccccccceeeeeEEeEEe---Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR---GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      .....++...||+|+||+||.|...   |.    .||+|.+++.  .+.+....|.+| .+|++++|||||+++|++.+.
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~  767 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS  767 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence            3445677899999999999999984   43    4888888864  456778899999 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc-------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecch
Q 039021          202 EEMILITEYLPKGNLKGILSKK-------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG  256 (464)
                      ...+|++|||+||||..+|++.       ..++..+++.++.|||+                  |+||+....+||+|||
T Consensus       768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccc
Confidence            9999999999999999999864       46899999999999987                  9999999999999999


Q ss_pred             hhhhhcccCCCC-c----CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccC
Q 039021          257 VQMFYEQIHPNQ-E----NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQI  329 (464)
Q Consensus       257 ~a~~~~~~~~~~-~----gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~  329 (464)
                      ||+.+....... .    -...|||||.+..+.++.|+|||||||+|||++| |..||.+.+ .+.+.....+.+.. ++
T Consensus       848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~-~P  926 (1025)
T KOG1095|consen  848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLD-PP  926 (1025)
T ss_pred             hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccC-CC
Confidence            999665433222 2    3468999999999999999999999999999999 999999987 56666555555544 44


Q ss_pred             CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       330 ~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ..||+.++++|.+||+.+|++||+|..|+..+..+......
T Consensus       927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence            88999999999999999999999999999988887655443

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.2e-41  Score=326.24  Aligned_cols=233  Identities=22%  Similarity=0.224  Sum_probs=199.9

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      -.+|++++.||+|+||+||+|+.+  |..+|+|++++......++...++.| .+|...++|+||++|..|++.+.+|||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            347999999999999999999974  99999999999887778888999999 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc------
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ------  263 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~------  263 (464)
                      |||++|||+..+|.+.+.|++..++.|+.+++.                  |+|||..|++||+||||++-+..      
T Consensus       220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~  299 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES  299 (550)
T ss_pred             EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence            999999999999999999999999999988864                  99999999999999999853211      


Q ss_pred             -----------------cCC---------------------------CCcCCCCcccccccccCCCCCcccchhHHHHHH
Q 039021          264 -----------------IHP---------------------------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFY  299 (464)
Q Consensus       264 -----------------~~~---------------------------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  299 (464)
                                       ...                           ...|||.|||||++.+..|+..+|+||||||+|
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy  379 (550)
T KOG0605|consen  300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY  379 (550)
T ss_pred             hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence                             000                           112999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCccchhccccccCC--CCccC-CCCcHHHHHHHHHHcccCCCCCC---CHHHHHHHHHHH
Q 039021          300 QMLEGKHLQTNNSFDFMHLKSVNFE--PKFQI-SRCPNRLKQLIAQCTNKDPSKRP---TFAAVIITLEEV  364 (464)
Q Consensus       300 el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~li~~cl~~dp~~Rp---t~~~i~~~l~~~  364 (464)
                      ||+.|-+||.+.+......++.+.+  ..+|. ..+++++.+||.+||. ||++|.   .+.||.+|.+.-
T Consensus       380 EmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~  449 (550)
T KOG0605|consen  380 EMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFK  449 (550)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccc
Confidence            9999999999988554444433333  22222 4578999999999999 999996   588898886543

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-42  Score=325.53  Aligned_cols=227  Identities=19%  Similarity=0.276  Sum_probs=199.7

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +..|+..+.||+|+||.||+|.++  ++.||+|++..+.  .+...+.+.+| .+|.+++++||.++|+.+..+..++++
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii   89 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII   89 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence            345777899999999999999985  8899999998753  34556778888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~  266 (464)
                      ||||.||++.+.++....+++.++.-++++++.                  |||+..+|.+||+|||.+..+...   ..
T Consensus        90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence            999999999999998877788887777777765                  999999999999999999877643   24


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ++.||+.|||||++....|+.|+|||||||+++||++|.+|+.... +..+..+....+|.+. ..+++.+++||..||.
T Consensus       170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~-~~~S~~~kEFV~~CL~  248 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLD-GDFSPPFKEFVEACLD  248 (467)
T ss_pred             cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccc-cccCHHHHHHHHHHhh
Confidence            6679999999999999999999999999999999999999999887 5555555566666665 4799999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      +||+.||++.++++|
T Consensus       249 k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  249 KNPEFRPSAKELLKH  263 (467)
T ss_pred             cCcccCcCHHHHhhh
Confidence            999999999999987

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-41  Score=327.02  Aligned_cols=253  Identities=23%  Similarity=0.338  Sum_probs=211.6

Q ss_pred             cccCcCCCCCccccccccccccccccccceeeeeEEeEEe---C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC
Q 039021          115 TVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR---G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR  187 (464)
Q Consensus       115 ~~~~~~~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~---~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~  187 (464)
                      ....+.....|++....+.+.  +.||+|+||+||+|+.+   +   ..||+|..+.......+...++.+| ++|++++
T Consensus       142 ~L~~PI~r~~Wel~H~~v~l~--kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~  219 (474)
T KOG0194|consen  142 FLKRPIPRQKWELSHSDIELG--KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN  219 (474)
T ss_pred             eecccccccccEEeccCcccc--ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC
Confidence            344455666788887755554  99999999999999984   2   2389999986544557778899999 9999999


Q ss_pred             CCceeeeeceeeeCCceEEEEEecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCC
Q 039021          188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGD  248 (464)
Q Consensus       188 hpnIv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~  248 (464)
                      |||||++||++....++|||||+|+||+|.++|++.+ .++..+.+.++.+.|+                  |+|++.++
T Consensus       220 H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~  299 (474)
T KOG0194|consen  220 HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG  299 (474)
T ss_pred             CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC
Confidence            9999999999999999999999999999999998875 5999999999999976                  99999999


Q ss_pred             ceeEecchhhhhhcc--cCC-CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccc-ccc
Q 039021          249 HLKIGEYWVQMFYEQ--IHP-NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLK-SVN  322 (464)
Q Consensus       249 ~~kl~DFG~a~~~~~--~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~-~~~  322 (464)
                      .+||+|||+++.-..  ... ...-...|+|||.+....|+.++|||||||++||+++ |..||.+.. .+....+ ..+
T Consensus       300 ~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~  379 (474)
T KOG0194|consen  300 VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNG  379 (474)
T ss_pred             eEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcC
Confidence            999999999987652  112 1225689999999999999999999999999999999 899999988 4444444 234


Q ss_pred             CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       323 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      .+...+ ...|+++..++.+||..+|++||||.++.+.++.+......
T Consensus       380 ~r~~~~-~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  380 YRMPIP-SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             ccCCCC-CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            444433 56899999999999999999999999999999988765543

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-41  Score=326.82  Aligned_cols=241  Identities=22%  Similarity=0.365  Sum_probs=202.9

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ..|++...  .+.++..||+|+||+||+|+|.|. ||||+++.....++ +.+.|++| ..+++-+|.||+-+.|+|..+
T Consensus       385 ~~WeIp~~--ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  385 EEWEIPPE--EVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccCHH--Hhhccceeccccccceeecccccc-eEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            45555544  567789999999999999999987 99999998766554 78999999 999999999999999999988


Q ss_pred             CceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      +. .||+.+|+|.+|+.+|+. ...|+....+.|++|||.                  ||+|.+++.|||+|||++..-.
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~  539 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT  539 (678)
T ss_pred             ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence            76 999999999999999975 468999999999999987                  9999999999999999997654


Q ss_pred             cc-----CCCCcCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCC---CccCC
Q 039021          263 QI-----HPNQENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEP---KFQIS  330 (464)
Q Consensus       263 ~~-----~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~---~~~~~  330 (464)
                      ..     .....|+..|||||++..   .+|++++|||||||++|||++|..||.... .+++..+-.++..   .....
T Consensus       540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s  619 (678)
T KOG0193|consen  540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRS  619 (678)
T ss_pred             eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhc
Confidence            32     223349999999999964   578999999999999999999999999665 4444444444221   11226


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .+++++++|+..||.+++++||.|.+|+..|+.+...+
T Consensus       620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~  657 (678)
T KOG0193|consen  620 NCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL  657 (678)
T ss_pred             cCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence            68999999999999999999999999999888776544

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-41  Score=326.24  Aligned_cols=233  Identities=23%  Similarity=0.263  Sum_probs=201.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc-h-HHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH-P-VKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~-~-~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~  205 (464)
                      ..|.+++.||+|+||+|++|.+.  +..||+|++.+.... . ....+.+.+| .+++.++ ||||+++++++.....+|
T Consensus        17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~   96 (370)
T KOG0583|consen   17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY   96 (370)
T ss_pred             CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence            36999999999999999999984  899999987764222 1 1345566788 9999998 999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhhhhhc---c
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQMFYE---Q  263 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a~~~~---~  263 (464)
                      +|||||.||+|++++.+++++.+.++..+++|++.                  |||++.+ +++||+|||++....   .
T Consensus        97 ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~  176 (370)
T KOG0583|consen   97 IVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDG  176 (370)
T ss_pred             EEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCC
Confidence            99999999999999999999999999999999986                  9999999 999999999999872   3


Q ss_pred             cCCCCcCCCCcccccccccCC-CC-CcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCC-cHHHHHHH
Q 039021          264 IHPNQENSQRNDNSSIASNVL-DD-TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRC-PNRLKQLI  340 (464)
Q Consensus       264 ~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li  340 (464)
                      ...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+...+...+......++ ..+ ++++..|+
T Consensus       177 ~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p-~~~~S~~~~~Li  255 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP-SYLLSPEARSLI  255 (370)
T ss_pred             cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC-CCcCCHHHHHHH
Confidence            456778999999999999977 86 789999999999999999999999775444444444444444 446 99999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      .+||..||.+|+|+.+|+.|-|...
T Consensus       256 ~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  256 EKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999998877553

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-41  Score=332.00  Aligned_cols=230  Identities=17%  Similarity=0.197  Sum_probs=203.1

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCce
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~  204 (464)
                      ....+|.+.++||+|+||+|+++..+  ++.+|||++++..+-..+..+....| +++... +||++++++.+|++.+++
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            33447999999999999999999985  77999999999887777888888999 888887 599999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---c
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---Q  263 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~  263 (464)
                      |+||||+.|||+..+++ .+.+++..++.|+..++.                  |||||.+|++||+||||++...   +
T Consensus       445 ~fvmey~~Ggdm~~~~~-~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHIH-TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEEEecCCCcEEEEEe-cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence            99999999999655443 468999999999999875                  9999999999999999999754   4


Q ss_pred             cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          264 IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       264 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ...+.||||.|||||++.+..|+..+|+|||||+||||+.|..||.+.+.+.+...+....+.+| ..+|.+..++|+++
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP-~~ls~ea~~il~~l  602 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP-RFLSKEAIAIMRRL  602 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC-CcccHHHHHHHHHH
Confidence            55678899999999999999999999999999999999999999999986666666666666666 67899999999999


Q ss_pred             cccCCCCCCC-----HHHHHHH
Q 039021          344 TNKDPSKRPT-----FAAVIIT  360 (464)
Q Consensus       344 l~~dp~~Rpt-----~~~i~~~  360 (464)
                      |.++|++|..     +.+|..|
T Consensus       603 l~k~p~kRLG~~e~d~~~i~~h  624 (694)
T KOG0694|consen  603 LRKNPEKRLGSGERDAEDIKKH  624 (694)
T ss_pred             hccCcccccCCCCCCchhhhhC
Confidence            9999999974     5677776

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-41  Score=291.15  Aligned_cols=237  Identities=22%  Similarity=0.236  Sum_probs=209.4

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV  199 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~  199 (464)
                      ..|.++    +|++++.||+|.||.||+|+.+  +..||+|++.+..+...+...++++| ++-+.|+||||+++|++|.
T Consensus        17 ~~~~l~----dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh   92 (281)
T KOG0580|consen   17 KTWTLD----DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH   92 (281)
T ss_pred             cccchh----hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee
Confidence            445555    8899999999999999999985  77899999998766666677889999 9999999999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHh--hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          200 LGEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      +....||++||.+.|+|+..|.  ...++++.....|+.|+|.                  |+|++..+.+||+|||.+.
T Consensus        93 d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV  172 (281)
T KOG0580|consen   93 DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSV  172 (281)
T ss_pred             ccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCcee
Confidence            9999999999999999999998  5678999999999999986                  9999999999999999998


Q ss_pred             hhc-ccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHH
Q 039021          260 FYE-QIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       260 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      ... ....+.|||..|.+||+..+..++..+|+|++||+.||++.|.+||...........+......+| ..++.++.+
T Consensus       173 ~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p-~~is~~a~d  251 (281)
T KOG0580|consen  173 HAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP-STISGGAAD  251 (281)
T ss_pred             ecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC-cccChhHHH
Confidence            764 344577899999999999999999999999999999999999999998884444444433444444 678999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|.+||.++|.+|.+..|+++|.|-.
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             HHHHHhccCccccccHHHHhhhHHHH
Confidence            99999999999999999999998754

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-41  Score=322.23  Aligned_cols=225  Identities=20%  Similarity=0.270  Sum_probs=199.0

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|....+||+|+-|.||.|+.  +++.||+|.+.....   ...+-+.+| .+|+.++|+|||++++.|..++.+++|||
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            377788999999999999997  488999999986532   223467788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |++||+|.+++... .+++.++..++++++.                  |||++.+|.+||+|||++..+....   .+.
T Consensus       351 ym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~Tm  429 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTM  429 (550)
T ss_pred             ecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccc
Confidence            99999999999765 6999999999999976                  9999999999999999998876433   455


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccC-CCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~  346 (464)
                      .|||+|||||++....|+.|+|||||||+++||+-|++||-..+ ...+..+..+..|.+.. ..+|+++++|+.+||+.
T Consensus       430 VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~  509 (550)
T KOG0578|consen  430 VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVV  509 (550)
T ss_pred             cCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhc
Confidence            69999999999999999999999999999999999999999877 66677777777776654 56899999999999999


Q ss_pred             CCCCCCCHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITL  361 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l  361 (464)
                      |+++|+++.|+|+|-
T Consensus       510 dv~~RasA~eLL~Hp  524 (550)
T KOG0578|consen  510 DVEQRASAKELLEHP  524 (550)
T ss_pred             chhcCCCHHHHhcCh
Confidence            999999999999984

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-40  Score=318.74  Aligned_cols=245  Identities=19%  Similarity=0.315  Sum_probs=208.1

Q ss_pred             CccccCcCCCCCccccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCC
Q 039021          113 PLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHP  189 (464)
Q Consensus       113 p~~~~~~~~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hp  189 (464)
                      |..+....+...|+++..++  ....+||-|.||+||.|.|+  .-.||||.++.+    ....++|..| .+|+.++||
T Consensus       250 ptvygvSPn~DkWEmeRtdI--tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHp  323 (1157)
T KOG4278|consen  250 PTVYGVSPNADKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHP  323 (1157)
T ss_pred             CceeeecCCcchhhccchhe--eeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCc
Confidence            33333445556788776654  55679999999999999996  678999999965    4557789999 999999999


Q ss_pred             ceeeeeceeeeCCceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCc
Q 039021          190 NILQFLGSIVLGEEMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDH  249 (464)
Q Consensus       190 nIv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~  249 (464)
                      |+|+++|+|+....+|||+|||.+|+|.+||++  +..++.-.++.++.||+.                  |+|+.++..
T Consensus       324 NLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhi  403 (1157)
T KOG4278|consen  324 NLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHI  403 (1157)
T ss_pred             cHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccce
Confidence            999999999999999999999999999999986  356777788888888864                  999999999


Q ss_pred             eeEecchhhhhhcccCCCCc----CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccC
Q 039021          250 LKIGEYWVQMFYEQIHPNQE----NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNF  323 (464)
Q Consensus       250 ~kl~DFG~a~~~~~~~~~~~----gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~  323 (464)
                      +|++|||+++.......+-.    -.+.|.|||-+....++.|+|||+|||+|||+.| |..||++.+ .+.......++
T Consensus       404 VKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy  483 (1157)
T KOG4278|consen  404 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY  483 (1157)
T ss_pred             EEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc
Confidence            99999999999875544332    4678999999999999999999999999999998 999999988 44445555555


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +..- +..||+.+++||+.||+..|.+||+|+||-+.++.+
T Consensus       484 RM~~-PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  484 RMDG-PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             cccC-CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            5554 478999999999999999999999999999988765

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-40  Score=315.58  Aligned_cols=230  Identities=19%  Similarity=0.173  Sum_probs=197.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.++  ++.||+|++...........+.+.+| .++++++||||+++++++.+.+.+++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            5788899999999999999985  88999999986433333455678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      |+++|+|.+++..++.+++..+..++.|++.                  |||+++++.+||+|||+++..........||
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt  161 (291)
T cd05612          82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGT  161 (291)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCC
Confidence            9999999999998889999999999999986                  9999999999999999999876655556799


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||..................++ ..+++.+.+||++||+.||.+|
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~dp~~R  240 (291)
T cd05612         162 PEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP-RHLDLYAKDLIKKLLVVDRTRR  240 (291)
T ss_pred             hhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC-ccCCHHHHHHHHHHcCCCHHHc
Confidence            999999999999999999999999999999999999988763222222222233443 4578999999999999999999


Q ss_pred             CC-----HHHHHHHHHH
Q 039021          352 PT-----FAAVIITLEE  363 (464)
Q Consensus       352 pt-----~~~i~~~l~~  363 (464)
                      |+     +.++++|.|.
T Consensus       241 ~~~~~~~~~~~l~h~~~  257 (291)
T cd05612         241 LGNMKNGADDVKNHRWF  257 (291)
T ss_pred             cCCccCCHHHHhcCccc
Confidence            95     9999988654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=5.6e-40  Score=320.00  Aligned_cols=229  Identities=19%  Similarity=0.204  Sum_probs=196.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|+++  ++.||+|++...........+.+.+| .++++++||||+++++++.+++..|+|||
T Consensus        19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   98 (329)
T PTZ00263         19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLE   98 (329)
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEc
Confidence            7899999999999999999984  78999999986533333455678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      |+++|+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++..........||
T Consensus        99 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt  178 (329)
T PTZ00263         99 FVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGT  178 (329)
T ss_pred             CCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCC
Confidence            9999999999998889999999999999976                  9999999999999999998776655566799


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      +.|+|||++.+..++.++|||||||++|+|++|..||.+................++ ..+++.+.+||.+||+.||.+|
T Consensus       179 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~~L~~dP~~R  257 (329)
T PTZ00263        179 PEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP-NWFDGRARDLVKGLLQTDHTKR  257 (329)
T ss_pred             hhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC-CCCCHHHHHHHHHHhhcCHHHc
Confidence            999999999999999999999999999999999999987663222222222233333 4578999999999999999999


Q ss_pred             CC-----HHHHHHHHH
Q 039021          352 PT-----FAAVIITLE  362 (464)
Q Consensus       352 pt-----~~~i~~~l~  362 (464)
                      |+     +.+++.|.+
T Consensus       258 ~~~~~~~~~~ll~hp~  273 (329)
T PTZ00263        258 LGTLKGGVADVKNHPY  273 (329)
T ss_pred             CCCCCCCHHHHhcCCc
Confidence            96     789988854

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-40  Score=308.16  Aligned_cols=229  Identities=23%  Similarity=0.321  Sum_probs=189.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC--ceEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE--EMIL  206 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~--~~~l  206 (464)
                      .++..++.||+|+||.||++...  |...|||.+....   ....+.+.+| .+|++++|||||+++|......  .++|
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            35777899999999999999984  7999999998752   1125678889 9999999999999999755544  6999


Q ss_pred             EEEecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhhhhcc---
Q 039021          207 ITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQMFYEQ---  263 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~~~~~---  263 (464)
                      .|||+++|+|.+++.+.+ .|++..++.+++||++                  |||++. ++.+||+|||+++....   
T Consensus        94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            999999999999999876 8999999999999987                  999999 79999999999987763   


Q ss_pred             ---cCCCCcCCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCC-c-cchhcccc-ccCCCCccCCCCcHHH
Q 039021          264 ---IHPNQENSQRNDNSSIASNVL-DDTKKDICSFGYIFYQMLEGKHLQTNN-S-FDFMHLKS-VNFEPKFQISRCPNRL  336 (464)
Q Consensus       264 ---~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~el~~g~~p~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~  336 (464)
                         ......||+.|||||++..+. ...++|||||||++.||+||+.||... . .+....+. ....|.++ ..+|+++
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip-~~ls~~a  252 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIP-DSLSDEA  252 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCC-cccCHHH
Confidence               122345999999999998633 335999999999999999999999873 3 22222222 22234444 6699999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ++|+.+|+..||++|||+.+++.|....
T Consensus       253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~~  280 (313)
T KOG0198|consen  253 KDFLRKCFKRDPEKRPTAEELLEHPFLK  280 (313)
T ss_pred             HHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence            9999999999999999999999997644

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=330.36  Aligned_cols=240  Identities=20%  Similarity=0.320  Sum_probs=209.9

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      .+.-++.-....+.++||.|.||+|++|+.+     ...||||.++..  ..+++...|..| .||-+++||||++|-|+
T Consensus       621 eFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFdHPNIIrLEGV  698 (996)
T KOG0196|consen  621 EFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFDHPNIIRLEGV  698 (996)
T ss_pred             HhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCCCCcEEEEEEE
Confidence            3333444445778899999999999999984     568999999975  346778899999 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      .+...+++||+|||++|+|+.+|+.+ +.++..++..+++.||.                  |||++.+-..|++|||++
T Consensus       699 VTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLS  778 (996)
T KOG0196|consen  699 VTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLS  778 (996)
T ss_pred             EecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccce
Confidence            99999999999999999999999875 78999999999999975                  999999999999999999


Q ss_pred             hhhcccCCC----CcC--CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCC
Q 039021          259 MFYEQIHPN----QEN--SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQIS  330 (464)
Q Consensus       259 ~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~  330 (464)
                      +.+++..+.    ..|  ..+|.|||.+...+++.+||||||||+|||.++ |+.||.+.+ .+.+..+..+++.+.| .
T Consensus       779 Rvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP-m  857 (996)
T KOG0196|consen  779 RVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP-M  857 (996)
T ss_pred             eecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC-C
Confidence            988754422    122  469999999999999999999999999999987 999999887 7777777777776654 6


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +||..+.+||..||++|-.+||.|.+|+..|+++.+
T Consensus       858 DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  858 DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            799999999999999999999999999999999864

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-39  Score=301.64  Aligned_cols=236  Identities=19%  Similarity=0.252  Sum_probs=198.6

Q ss_pred             CccccccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      ..++...-.+|++...||.|.-+.||+|++  ++..||||++.-+....  ....+++| ..|+.++||||++++..|..
T Consensus        18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv   95 (516)
T KOG0582|consen   18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVV   95 (516)
T ss_pred             cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEe
Confidence            334555556899999999999999999998  48999999998754433  36788999 99999999999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      +..+|+||.||.+|++.++++..  ..+++..+..+++++++                  ||||+++|.|||+|||.+-.
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~  175 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSAS  175 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeee
Confidence            99999999999999999999763  45899999999999987                  99999999999999998766


Q ss_pred             hcccC-------CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc--
Q 039021          261 YEQIH-------PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ--  328 (464)
Q Consensus       261 ~~~~~-------~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~--  328 (464)
                      +....       .+..||+.|||||++..  ..|+.|+|||||||+..||.+|..||.... ...+.....+.+|...  
T Consensus       176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~  255 (516)
T KOG0582|consen  176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS  255 (516)
T ss_pred             ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc
Confidence            54211       34469999999999654  789999999999999999999999999887 4555555555444211  


Q ss_pred             ------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          329 ------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       329 ------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                            ...++..++.++..||++||.+|||++++++|-
T Consensus       256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~  294 (516)
T KOG0582|consen  256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA  294 (516)
T ss_pred             cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence                  134677899999999999999999999999984

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.7e-39  Score=316.13  Aligned_cols=229  Identities=19%  Similarity=0.141  Sum_probs=195.4

Q ss_pred             ccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|.+.+.||+|+||.||+|.++   +..||+|.+.............+.+| .+++.++||||+++++++.+.+.+++||
T Consensus        31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~  110 (340)
T PTZ00426         31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL  110 (340)
T ss_pred             hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEE
Confidence            6888999999999999999874   35899999976433334455677888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      ||+++|+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++..........|
T Consensus       111 Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~g  190 (340)
T PTZ00426        111 EFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCG  190 (340)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecC
Confidence            99999999999988889999999999999986                  999999999999999999877655556679


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      |+.|+|||++.+..++.++|||||||++|||++|..||...+..............++ ..+++.+.++|++||+.||++
T Consensus       191 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~~l~~dp~~  269 (340)
T PTZ00426        191 TPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP-KFLDNNCKHLMKKLLSHDLTK  269 (340)
T ss_pred             ChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHHcccCHHH
Confidence            9999999999998899999999999999999999999988763332222222223333 557899999999999999999


Q ss_pred             CC-----CHHHHHHHHH
Q 039021          351 RP-----TFAAVIITLE  362 (464)
Q Consensus       351 Rp-----t~~~i~~~l~  362 (464)
                      |+     +++++++|.+
T Consensus       270 R~~~~~~~~~~~~~hp~  286 (340)
T PTZ00426        270 RYGNLKKGAQNVKEHPW  286 (340)
T ss_pred             cCCCCCCCHHHHHcCCC
Confidence            95     8999998854

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.8e-39  Score=290.29  Aligned_cols=226  Identities=15%  Similarity=0.208  Sum_probs=185.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|+...++|+|+||.||+|+++  |+.||||.+.... .++...+...+| ++|++|+|||+|.++.+|.....++||+|
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            4778899999999999999985  9999999998753 234455667788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+. ++.+-|. ....++.+.+..|++|+++                  |||++.+|.+||||||+|+.+....   +.
T Consensus        82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD  160 (396)
T KOG0593|consen   82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD  160 (396)
T ss_pred             ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence            9998 5444444 4567999999999999987                  9999999999999999999987322   23


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--------------------cCCC
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--------------------NFEP  325 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--------------------~~~~  325 (464)
                      ...|..|+|||.+.+ ..|+..+||||+||++.||++|.+.|++.+ .+....+..                    +...
T Consensus       161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l  240 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL  240 (396)
T ss_pred             hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence            348999999999987 899999999999999999999999999876 332222110                    0000


Q ss_pred             Ccc---------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          326 KFQ---------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       326 ~~~---------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      +.+         -+.++.-+.+|++.||..||++|++.++++.|
T Consensus       241 P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  241 PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            000         14466788999999999999999999999987

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-39  Score=309.38  Aligned_cols=233  Identities=21%  Similarity=0.301  Sum_probs=201.8

Q ss_pred             cccccccccccccceeeeeEEeEEe----C--ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR----G--TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~----~--~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ......+.+.||.|-||.||+|.+.    |  --||||+.+.+..  .+..+.|..| .+|++++|||||+++|+|.+ .
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~e-~  463 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q  463 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence            3335667889999999999999983    2  3689999997643  3347789999 99999999999999999975 5


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      +.+||||+++-|.|..||+. +..|+......|+.||+.                  |||+.+..-+||+|||+++.+.+
T Consensus       464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence            68999999999999999975 468999999999999975                  99999999999999999999986


Q ss_pred             cCCCCc----CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHH
Q 039021          264 IHPNQE----NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       264 ~~~~~~----gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ......    -.+.|||||.+....++.+||||-|||.+||+++ |..||.+.. .+.+..+..+.+++.| +.||+.++
T Consensus       544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P-~nCPp~LY  622 (974)
T KOG4257|consen  544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCP-PNCPPALY  622 (974)
T ss_pred             cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCC-CCCChHHH
Confidence            654332    4678999999999999999999999999999998 999999876 6666666677777766 77999999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .|+.+||++||.+||+|.+|...|..+..
T Consensus       623 slmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  623 SLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            99999999999999999999998887754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=7.6e-39  Score=311.27  Aligned_cols=224  Identities=18%  Similarity=0.214  Sum_probs=189.6

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKG  214 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g  214 (464)
                      +.||+|+||.||+|+++  |+.||+|+++............+.+| .++++++||||+++++++...+.+++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999984  88999999986543334455667788 9999999999999999999999999999999999


Q ss_pred             ChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCCC
Q 039021          215 NLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQR  273 (464)
Q Consensus       215 ~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~  273 (464)
                      +|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++.....   .....||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence            99999988889999999999999986                  999999999999999999864321   223459999


Q ss_pred             cccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC-
Q 039021          274 NDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP-  352 (464)
Q Consensus       274 y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  352 (464)
                      |+|||++.+..++.++|||||||++|||++|+.||...+..............++ ..+++++.+||.+||+.||++|| 
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05571         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHccCCHHHcCC
Confidence            9999999999999999999999999999999999987763333222222233443 56899999999999999999999 


Q ss_pred             ----CHHHHHHHHH
Q 039021          353 ----TFAAVIITLE  362 (464)
Q Consensus       353 ----t~~~i~~~l~  362 (464)
                          ++.++++|-+
T Consensus       240 ~~~~~~~~ll~h~~  253 (323)
T cd05571         240 GGPEDAKEIMEHRF  253 (323)
T ss_pred             CCCCCHHHHHcCCC
Confidence                8999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.7e-38  Score=310.88  Aligned_cols=233  Identities=18%  Similarity=0.276  Sum_probs=187.8

Q ss_pred             ccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLG  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~  201 (464)
                      ..+|++.+.||+|+||.||+|.+.       ++.||+|+++...  .......+.+| .+|+++ +||||+++++++...
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP   83 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence            347889999999999999999752       4689999997542  23344567888 999999 899999999988764


Q ss_pred             -CceEEEEEecCCCChHHHHhhc---------------------------------------------------------
Q 039021          202 -EEMILITEYLPKGNLKGILSKK---------------------------------------------------------  223 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~~~---------------------------------------------------------  223 (464)
                       +.+++||||+++|+|.+++...                                                         
T Consensus        84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (338)
T cd05102          84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET  163 (338)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence             4689999999999999999642                                                         


Q ss_pred             -----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcc
Q 039021          224 -----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRND  275 (464)
Q Consensus       224 -----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~  275 (464)
                           .++++.++..++.||++                  |||++.++.+||+|||+++......     ....+++.|+
T Consensus       164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~  243 (338)
T cd05102         164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM  243 (338)
T ss_pred             cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcccc
Confidence                 24778888999999987                  9999999999999999998654221     1223668899


Q ss_pred             cccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-c-hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          276 NSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-D-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       276 aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      |||++.+..++.++|||||||++|||++ |..||.+... + .......+..+. .+..+++++.+|+.+||+.||++||
T Consensus       244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RP  322 (338)
T cd05102         244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR-APENATPEIYRIMLACWQGDPKERP  322 (338)
T ss_pred             CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHccCChhhCc
Confidence            9999999999999999999999999997 9999987552 2 222222222222 2356789999999999999999999


Q ss_pred             CHHHHHHHHHHHHH
Q 039021          353 TFAAVIITLEEVSA  366 (464)
Q Consensus       353 t~~~i~~~l~~~~~  366 (464)
                      |+.+|++.|+.+..
T Consensus       323 s~~el~~~l~~~~~  336 (338)
T cd05102         323 TFSALVEILGDLLQ  336 (338)
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999988743

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.1e-38  Score=308.01  Aligned_cols=233  Identities=15%  Similarity=0.175  Sum_probs=193.4

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||++++.  +..||+|++....  .......+.+| ++|++++||||+++++++..++..++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            3457999999999999999999985  8899999998642  23445678889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccC-C
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIH-P  266 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~-~  266 (464)
                      ||||+++|+|.+++.....+++..+..++.|++.                   |||++.++.+||+|||+++...... .
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  160 (331)
T cd06649          81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN  160 (331)
T ss_pred             EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccc
Confidence            9999999999999988888999999999999876                   9999999999999999998664332 3


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcc----------------------------
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL----------------------------  318 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~----------------------------  318 (464)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||..........                            
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV  240 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence            3459999999999999999999999999999999999999997543111100                            


Q ss_pred             -------------------ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          319 -------------------KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       319 -------------------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                                         ......+..+...+++++.+||.+||+.||++|||+.++++|.+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence                               0011112222234688999999999999999999999999997644

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-38  Score=311.35  Aligned_cols=230  Identities=17%  Similarity=0.161  Sum_probs=194.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  ++.||+|+++............+.+| .+++.++||||+++++++.+++..|||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            5888999999999999999984  78999999986543333455677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      |+++|+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++..........||
T Consensus        82 ~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt  161 (333)
T cd05600          82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGS  161 (333)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccC
Confidence            9999999999988888999999999999986                  9999999999999999998776655566799


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hcccc----ccCCCCcc--CCCCcHHHHHHHHHHc
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKS----VNFEPKFQ--ISRCPNRLKQLIAQCT  344 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~----~~~~~~~~--~~~~~~~~~~li~~cl  344 (464)
                      +.|+|||++.+..++.++|||||||++|||++|..||...+... .....    ....+...  ...+++++.+||.+||
T Consensus       162 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l  241 (333)
T cd05600         162 PDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI  241 (333)
T ss_pred             ccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999998766221 11111    11111111  1246899999999999


Q ss_pred             ccCCCCCCCHHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~  362 (464)
                      ..+|++||++.+++.|.+
T Consensus       242 ~~~~~rr~s~~~ll~h~~  259 (333)
T cd05600         242 NDPSRRFGSLEDIKNHPF  259 (333)
T ss_pred             hChhhhcCCHHHHHhCcc
Confidence            999999999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-38  Score=306.36  Aligned_cols=227  Identities=19%  Similarity=0.265  Sum_probs=196.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc-eEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE-MILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~-~~lv~  208 (464)
                      +|..++.+|+|+||.+++++++  +..+++|.+.-....... .+...+| .++++++|||||.+++.|.+++. ++|||
T Consensus         5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            6889999999999999999985  778999999876555443 3467778 99999999999999999999988 99999


Q ss_pred             EecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          209 EYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |||+||+|.+.|.+.  ..++++.+..|+.|++.                  ||+++.++.|||+|||+|+......   
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a  163 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA  163 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh
Confidence            999999999999653  57899999999999975                  9999999999999999999987543   


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh-ccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM-HLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      .+..||+.||.||++.+.+|+.|+|||||||++|||++-+.+|.+.+...+ ..+......+. +...+.+++.+|+.||
T Consensus       164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl-p~~ys~el~~lv~~~l  242 (426)
T KOG0589|consen  164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL-PSMYSSELRSLVKSML  242 (426)
T ss_pred             heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC-CccccHHHHHHHHHHh
Confidence            445599999999999999999999999999999999999999999884433 33333332333 3668999999999999


Q ss_pred             ccCCCCCCCHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITL  361 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l  361 (464)
                      ..+|..||++.+++.+.
T Consensus       243 ~~~P~~RPsa~~LL~~P  259 (426)
T KOG0589|consen  243 RKNPEHRPSALELLRRP  259 (426)
T ss_pred             hcCCccCCCHHHHhhCh
Confidence            99999999999999873

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-39  Score=306.06  Aligned_cols=230  Identities=19%  Similarity=0.256  Sum_probs=189.9

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHHHHHHhcC-CCceeeeeceeeeCC-ceE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELR-HPNILQFLGSIVLGE-EMI  205 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~l~~l~-hpnIv~~~~~~~~~~-~~~  205 (464)
                      ...+|.++++||.|.||.||+|+..  |..||||.+++....-+ +...+++...|++|+ |||||++.+++.+.+ .+|
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e-e~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH-HHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            3457999999999999999999974  88999999998655432 233344338899998 999999999999987 999


Q ss_pred             EEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC
Q 039021          206 LITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      +|||||+. +|+++++. +..|++..++.|+.||++                  |||+.....+||+|||+|+.+....+
T Consensus        87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP  165 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP  165 (538)
T ss_pred             eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC
Confidence            99999987 99999976 468999999999999987                  99999999999999999999886554


Q ss_pred             C--CcCCCCcccccccc-cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc--------------------cc
Q 039021          267 N--QENSQRNDNSSIAS-NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS--------------------VN  322 (464)
Q Consensus       267 ~--~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~--------------------~~  322 (464)
                      .  ...|..|+|||++. ...|+.+.|+||+|||++|+.+-++.|++.+ .+.+..+.                    .+
T Consensus       166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn  245 (538)
T KOG0661|consen  166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN  245 (538)
T ss_pred             cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence            3  34999999999885 4889999999999999999999999999877 22222110                    00


Q ss_pred             CC-CCcc-------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          323 FE-PKFQ-------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       323 ~~-~~~~-------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .. |...       .+.+++++.++|.+||..||++|||+.+.++|.
T Consensus       246 f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  246 FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            00 1111       144789999999999999999999999999985

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-38  Score=305.83  Aligned_cols=238  Identities=25%  Similarity=0.377  Sum_probs=190.1

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ..++..++.+|.-.+.||+|+||.||+|... |+.||||.+.......   ..+|.+| .++.+++|||+|+|+|||.+.
T Consensus        67 ~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~  143 (361)
T KOG1187|consen   67 YDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEG  143 (361)
T ss_pred             HHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecC
Confidence            3445666678888899999999999999986 5899999887643211   4459999 999999999999999999998


Q ss_pred             C-ceEEEEEecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh---------------------hhcccCCCceeEecchh
Q 039021          202 E-EMILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR---------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       202 ~-~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~---------------------Nill~~~~~~kl~DFG~  257 (464)
                      + ..+||+||+++|+|.++|+.+.  +++|..+++|+.++|+                     |||||+++.+||+|||+
T Consensus       144 ~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGL  223 (361)
T KOG1187|consen  144 GEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGL  223 (361)
T ss_pred             CceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccC
Confidence            8 4999999999999999998754  8999999999999998                     99999999999999999


Q ss_pred             hhhhcc-cCCC--C-cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhcc---cc-c----
Q 039021          258 QMFYEQ-IHPN--Q-ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHL---KS-V----  321 (464)
Q Consensus       258 a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~---~~-~----  321 (464)
                      |+.... ....  . .||.+|+|||++..+..+.|+|||||||+|.||++|+.|.....    .....+   .. .    
T Consensus       224 a~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~  303 (361)
T KOG1187|consen  224 AKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLR  303 (361)
T ss_pred             cccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchh
Confidence            977654 3222  2 79999999999999999999999999999999999998776432    111111   00 0    


Q ss_pred             -cCCCCccCCCCc-----HHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          322 -NFEPKFQISRCP-----NRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       322 -~~~~~~~~~~~~-----~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                       ...+.......+     ..+..+..+|++.+|.+||+|.+|.+.|+.+
T Consensus       304 eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  304 EIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             heeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence             001111101222     2355677799999999999999998888554

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-40  Score=294.24  Aligned_cols=226  Identities=16%  Similarity=0.217  Sum_probs=196.3

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      |.-|.+.++||+|+||.||+|.++  |+.||+|.+..+     ...+++..| .+|++++.|+||++||.+.....++||
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV  106 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV  106 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence            345888999999999999999985  999999999863     346678888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||||..|++.+.++. +++|++.++..+++.-++                  |||++-+|++||+|||.|..+.+..   
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            999999999999975 578999988877776655                  9999999999999999998887543   


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccC-CCCcHHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQC  343 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~c  343 (464)
                      .+..||+.|||||++.+..|+.++||||||++..||..|++||.+.. ...+..+-.+.+|.|.. ..++.++.+|+++|
T Consensus       187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C  266 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC  266 (502)
T ss_pred             CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence            34559999999999999999999999999999999999999999877 44555555555555543 44789999999999


Q ss_pred             cccCCCCCCCHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l  361 (464)
                      |.++|++|-|+-++++|.
T Consensus       267 LiK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  267 LIKKPEERKTALRLCEHT  284 (502)
T ss_pred             hcCCHHHHHHHHHHhhhh
Confidence            999999999999998873

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=4.4e-38  Score=305.85  Aligned_cols=224  Identities=18%  Similarity=0.212  Sum_probs=188.4

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKG  214 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g  214 (464)
                      +.||+|+||.||+++++  |..||+|+++............+.+| .+++.++||||++++++|...+.+||||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999984  88999999986543334455667788 9999999999999999999999999999999999


Q ss_pred             ChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCcCCCC
Q 039021          215 NLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQENSQR  273 (464)
Q Consensus       215 ~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~gt~~  273 (464)
                      +|..++...+.+++..+..++.||+.                  |||++.++.+||+|||+++......   ....||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence            99999988888999999999999986                  9999999999999999988643221   23459999


Q ss_pred             cccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC-
Q 039021          274 NDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP-  352 (464)
Q Consensus       274 y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  352 (464)
                      |+|||++.+..++.++|||||||++|||++|+.||...+..............++ ..+++++.++|.+||+.||++|| 
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05595         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHHccCCHHHhCC
Confidence            9999999999999999999999999999999999987663322222222223333 56899999999999999999998 


Q ss_pred             ----CHHHHHHHHH
Q 039021          353 ----TFAAVIITLE  362 (464)
Q Consensus       353 ----t~~~i~~~l~  362 (464)
                          ++.++++|-+
T Consensus       240 ~~~~~~~~~l~h~~  253 (323)
T cd05595         240 GGPSDAKEVMEHRF  253 (323)
T ss_pred             CCCCCHHHHHcCCC
Confidence                8999998853

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=8.4e-38  Score=298.61  Aligned_cols=228  Identities=15%  Similarity=0.181  Sum_probs=187.9

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |+..+.||+|+||+||+|.+.  ++.||+|.+.............+.+| .++++++|+||+++++++.+++.+++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            677889999999999999984  88999999986543333344567788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCC
Q 039021          211 LPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~  268 (464)
                      +++|+|.+++..  ...+++..+..++.|++.                  |||+++++.+||+|||+++......  ...
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR  161 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence            999999988854  346899999999999976                  9999999999999999998754322  234


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      .||+.|+|||++.+..++.++|||||||++|+|++|+.||......    ............++ ..+++++.+|+++||
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~li~~~l  240 (285)
T cd05631         162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYS-EKFSEDAKSICRMLL  240 (285)
T ss_pred             CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCC-ccCCHHHHHHHHHHh
Confidence            5999999999999999999999999999999999999999875421    11111111122222 458899999999999


Q ss_pred             ccCCCCCCC-----HHHHHHHHH
Q 039021          345 NKDPSKRPT-----FAAVIITLE  362 (464)
Q Consensus       345 ~~dp~~Rpt-----~~~i~~~l~  362 (464)
                      +.||++||+     ++++++|.+
T Consensus       241 ~~~P~~R~~~~~~~~~~~~~h~~  263 (285)
T cd05631         241 TKNPKERLGCRGNGAAGVKQHPI  263 (285)
T ss_pred             hcCHHHhcCCCCCCHHHHhcCHh
Confidence            999999997     899998865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-38  Score=303.87  Aligned_cols=222  Identities=17%  Similarity=0.189  Sum_probs=186.3

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|+||.||+|++.  ++.||+|+++............+..| .++++++||||+++++++.+.+..|+||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999984  78999999986433334455667788 999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCCCcc
Q 039021          217 KGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQRND  275 (464)
Q Consensus       217 ~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~  275 (464)
                      .+++...+.+++..+..++.|+++                  |||++.++.+||+|||+++.....   .....||+.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~  160 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL  160 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence            999988889999999999999986                  999999999999999999864322   22345999999


Q ss_pred             cccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCC--
Q 039021          276 NSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT--  353 (464)
Q Consensus       276 aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt--  353 (464)
                      |||++.+..++.++|||||||++|+|++|+.||..................++ ..+++++.++|.+||..||++||+  
T Consensus       161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~~~~  239 (312)
T cd05585         161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP-DGFDRDAKDLLIGLLSRDPTRRLGYN  239 (312)
T ss_pred             CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC-CcCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            99999999999999999999999999999999987763322222222233333 568999999999999999999974  


Q ss_pred             -HHHHHHHHH
Q 039021          354 -FAAVIITLE  362 (464)
Q Consensus       354 -~~~i~~~l~  362 (464)
                       +.+++.|.+
T Consensus       240 ~~~e~l~hp~  249 (312)
T cd05585         240 GAQEIKNHPF  249 (312)
T ss_pred             CHHHHHcCCC
Confidence             678887743

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=6.6e-38  Score=305.19  Aligned_cols=224  Identities=18%  Similarity=0.215  Sum_probs=189.1

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKG  214 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g  214 (464)
                      +.||+|+||.||+++++  ++.||+|++.............+.+| .+++.++||||+++++++...+.+++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46899999999999984  88999999986544444555677788 9999999999999999999999999999999999


Q ss_pred             ChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCCC
Q 039021          215 NLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQR  273 (464)
Q Consensus       215 ~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~  273 (464)
                      +|.+++...+.+++.++..++.||+.                  |||++.++.+||+|||+++.....   .....||+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence            99999988888999999999999986                  999999999999999998864322   223459999


Q ss_pred             cccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC-
Q 039021          274 NDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP-  352 (464)
Q Consensus       274 y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  352 (464)
                      |+|||++.+..++.++|||||||++|+|++|+.||..................++ ..+++++.+||++||+.||++|| 
T Consensus       161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~li~~~L~~dP~~R~~  239 (328)
T cd05593         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP-RTLSADAKSLLSGLLIKDPNKRLG  239 (328)
T ss_pred             ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC-CCCCHHHHHHHHHHcCCCHHHcCC
Confidence            9999999999999999999999999999999999987663322222222233333 56899999999999999999997 


Q ss_pred             ----CHHHHHHHHH
Q 039021          353 ----TFAAVIITLE  362 (464)
Q Consensus       353 ----t~~~i~~~l~  362 (464)
                          ++.++++|.+
T Consensus       240 ~~~~~~~~il~h~~  253 (328)
T cd05593         240 GGPDDAKEIMRHSF  253 (328)
T ss_pred             CCCCCHHHHhcCCC
Confidence                8999998854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2e-37  Score=302.42  Aligned_cols=232  Identities=16%  Similarity=0.190  Sum_probs=191.2

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||++.++  +..+|+|++....  .......+.+| +++++++||||++++++|.+++.+++
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence            3457999999999999999999985  7889999987642  23345678889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HP  266 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~  266 (464)
                      ||||+++|+|.+++...+.+++..+..++.|+++                   |||+++++.+||+|||++...... ..
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~  160 (333)
T cd06650          81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN  160 (333)
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccc
Confidence            9999999999999988888999999999999875                   999999999999999999866433 23


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcc----------------------------
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL----------------------------  318 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~----------------------------  318 (464)
                      ...|+..|+|||++.+..++.++|||||||++|+|++|+.||..........                            
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (333)
T cd06650         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSS  240 (333)
T ss_pred             cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhh
Confidence            3459999999999998889999999999999999999999997543111100                            


Q ss_pred             -----------------ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          319 -----------------KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       319 -----------------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                       ......+..+....+.++.+||.+||+.||++|||+.+++.|-+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~  302 (333)
T cd06650         241 YGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI  302 (333)
T ss_pred             hcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence                             001111112222357899999999999999999999999998654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=3e-38  Score=297.35  Aligned_cols=224  Identities=26%  Similarity=0.429  Sum_probs=183.4

Q ss_pred             ccccccccceeeeeEEeEEe------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          135 LHSSMVEQGVFGESQTAKWR------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+.+.||.|.||.||+|.++      +..|+||.++..  ......+.+.+| +.+++++||||++++|++...+..++|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv   79 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV   79 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence            35679999999999999997      789999999653  234456788889 999999999999999999988889999


Q ss_pred             EEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc----
Q 039021          208 TEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ----  263 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~----  263 (464)
                      |||+++|+|.++|...  ..+++..+..++.||++                  |||+++++.+||+|||+++....    
T Consensus        80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999876  78999999999999987                  99999999999999999987732    


Q ss_pred             -cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHH
Q 039021          264 -IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       264 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                       ..........|+|||.+.+..++.++||||||+++|||++ |+.||.... .+.......+.++. .+..++..+.++|
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li  238 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP-IPDNCPKDIYSLI  238 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT-SBTTSBHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce-eccchhHHHHHHH
Confidence             1223347789999999999889999999999999999999 789998876 33333333333333 3366899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+||..||++|||+.+|++.|
T Consensus       239 ~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  239 QQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHhcC
Confidence            999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-38  Score=310.45  Aligned_cols=229  Identities=19%  Similarity=0.320  Sum_probs=197.2

Q ss_pred             ccccccccccccccceeeeeEEeEEe---Cc--eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR---GT--WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      +-+....+.+.||+|.||.|++|.|+   |.  .||||.++......  ....|.+| .+|.+|+|||+|+|||+..+ .
T Consensus       107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-q  183 (1039)
T KOG0199|consen  107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-Q  183 (1039)
T ss_pred             ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-c
Confidence            33446777899999999999999995   33  78999999765433  56789999 99999999999999999987 7


Q ss_pred             ceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          203 EMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      ...||||+++.|+|.+.|++  +..|....+..|+.|||.                  |+|+.....|||+|||+.+.++
T Consensus       184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg  263 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALG  263 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccC
Confidence            78999999999999999986  467889999999999986                  9999999999999999999887


Q ss_pred             ccCC------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcH
Q 039021          263 QIHP------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       263 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ....      ...-.+.|.|||.+....++.+||||+|||++||||+ |+-||.+.. .++++.+..+.+.+-+ ..||+
T Consensus       264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRP-k~cse  342 (1039)
T KOG0199|consen  264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRP-KYCSE  342 (1039)
T ss_pred             CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCC-CCChH
Confidence            4332      1225678999999999999999999999999999999 999999988 6666666655555544 67999


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .++++++.||..+|.+||||..|.+.+
T Consensus       343 dIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  343 DIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             HHHHHHHHhccCCccccccHHHHHHhH
Confidence            999999999999999999999997543

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-37  Score=301.54  Aligned_cols=230  Identities=19%  Similarity=0.172  Sum_probs=198.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..|.+.+.||+|.||.||+|+.+  |+.+|+|++.+...........+.+| .+|+++. |||||+++++|++...+++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            35899999999999999999984  88999999998766555556788999 9999998 99999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC----CceeEecchhhhhhcc--
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG----DHLKIGEYWVQMFYEQ--  263 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~----~~~kl~DFG~a~~~~~--  263 (464)
                      ||+|.||+|++.|... .+++.++..++.|++.                  |+|+...    +.+|++|||+|.....  
T Consensus       115 mEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~  193 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE  193 (382)
T ss_pred             EEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence            9999999999999876 4999999999999986                  9998643    4799999999999876  


Q ss_pred             cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCcc---CCCCcHHHHHHH
Q 039021          264 IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ---ISRCPNRLKQLI  340 (464)
Q Consensus       264 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li  340 (464)
                      .....+||+.|+|||++....|+..+||||+||++|.|++|..||.+.........+......+.   .+.++..++++|
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i  273 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFI  273 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHH
Confidence            33456699999999999999999999999999999999999999999883333333322222222   255799999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +++|..||.+|+|+.++++|.|
T Consensus       274 ~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  274 RKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             HHhcccCcccCCCHHHHhcCcc
Confidence            9999999999999999999977

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-38  Score=303.04  Aligned_cols=230  Identities=20%  Similarity=0.255  Sum_probs=190.9

Q ss_pred             ccccccccccceeeeeEEeEEeC-ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      ...+.++||+|.||+|++|...+ ..||+|+++....  ......|.+| ++|.+|+|||||+++|+|..++++++||||
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             heehhhhhcCcccceeEEEEecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence            46778999999999999999875 9999999997633  4456789999 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCC--
Q 039021          211 LPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQ--  268 (464)
Q Consensus       211 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~--  268 (464)
                      +++|+|.+++.++  ..+......+++.||+.                  |+|+|.++++||+|||+++.+.......  
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq  696 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ  696 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence            9999999999876  23355667778999976                  9999999999999999999766443322  


Q ss_pred             ---cCCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCCCCccchhccccc-----cCC--CCccCCCCcHHH
Q 039021          269 ---ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSV-----NFE--PKFQISRCPNRL  336 (464)
Q Consensus       269 ---~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~--g~~p~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~  336 (464)
                         .-..+|||+|.+.-++++.+||||+||+++||+++  .+.||.....+.......     ..+  ....+.-||.++
T Consensus       697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~l  776 (807)
T KOG1094|consen  697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGL  776 (807)
T ss_pred             cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHH
Confidence               24689999999999999999999999999999875  789998876332222211     111  111236689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +++|.+||..|.++||+|+++..+|...
T Consensus       777 yelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  777 YELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            9999999999999999999999888754

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3.6e-37  Score=305.28  Aligned_cols=231  Identities=21%  Similarity=0.320  Sum_probs=187.0

Q ss_pred             cccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL  200 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~  200 (464)
                      ...+|++.+.||+|+||.||+|++.       +..||+|+++....  ......+.+| .+|+.+ +||||++++++|.+
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~  110 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTV  110 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence            3447888999999999999999752       55899999975432  2334567889 999999 89999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc---------------------------------------------------------
Q 039021          201 GEEMILITEYLPKGNLKGILSKK---------------------------------------------------------  223 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~---------------------------------------------------------  223 (464)
                      .+..++|||||++|+|.++++..                                                         
T Consensus       111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  190 (375)
T cd05104         111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR  190 (375)
T ss_pred             CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence            99999999999999999998642                                                         


Q ss_pred             ------------------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-
Q 039021          224 ------------------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-  266 (464)
Q Consensus       224 ------------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-  266 (464)
                                        ..+++..++.++.||++                  |||++.++.+||+|||+++....... 
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                              14678889999999986                  99999999999999999986643221 


Q ss_pred             ----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc--chhccccccCCCCccCCCCcHHHHHH
Q 039021          267 ----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF--DFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       267 ----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                          ...++..|+|||++.+..++.++|||||||++|||++ |..||.....  ........+..+.. +...+.++.+|
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l  349 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS-PECAPSEMYDI  349 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC-CCCCCHHHHHH
Confidence                1225668999999999999999999999999999998 8999977542  22222222222222 24568899999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +.+||+.||++|||+.+|++.|+.
T Consensus       350 i~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         350 MKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHccCChhHCcCHHHHHHHHHh
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=4.6e-37  Score=290.47  Aligned_cols=231  Identities=20%  Similarity=0.270  Sum_probs=190.9

Q ss_pred             ccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ..+|++.+.||+|+||.||+|.++     +..||+|.++...  .......+.+| ..+++++||||+++++++..++..
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM   81 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence            446888999999999999999863     5689999998642  23345678888 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      ++||||+++|+|.+++... ..+++..++.++.|+++                  |||++.++.+|++|||.+.......
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence            9999999999999999763 57899999999999986                  9999999999999999876643221


Q ss_pred             ----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHH
Q 039021          266 ----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       266 ----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                          ....++..|+|||++.+..++.++|||||||++||+++ |..||.... .+.......+..++. +..+|..+.++
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  240 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPA-PRNCPNLLHQL  240 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCC-CCCCCHHHHHH
Confidence                12235678999999999999999999999999999875 999998776 333333333333332 35689999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.+||+.+|++||++.+|++.|.++
T Consensus       241 i~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         241 MLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHcCCCchhCCCHHHHHHHHHhh
Confidence            9999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=3.2e-37  Score=306.69  Aligned_cols=230  Identities=13%  Similarity=0.088  Sum_probs=188.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|++++.||+|+||+||+|++.  ++.||+|++.............+.+| .++++++||||+++++++.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            4788899999999999999984  78999999987544444556778889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-------  264 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-------  264 (464)
                      |+++|+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++.....       
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence            9999999999988888999999999999976                  999999999999999997643100       


Q ss_pred             -------------------------------------------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHH
Q 039021          265 -------------------------------------------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQM  301 (464)
Q Consensus       265 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  301 (464)
                                                                 .....||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el  241 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM  241 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence                                                       0123599999999999999999999999999999999


Q ss_pred             HhCCCCCCCCccch-hcccc-ccCCCCccC-CCCcHHHHHHHHHH--cccCCCCCCCHHHHHHHHH
Q 039021          302 LEGKHLQTNNSFDF-MHLKS-VNFEPKFQI-SRCPNRLKQLIAQC--TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       302 ~~g~~p~~~~~~~~-~~~~~-~~~~~~~~~-~~~~~~~~~li~~c--l~~dp~~Rpt~~~i~~~l~  362 (464)
                      ++|..||....... ...+. ......++. ..+++++.+||.++  +..+|..||++.+++.|.+
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~  307 (381)
T cd05626         242 LVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF  307 (381)
T ss_pred             HhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence            99999998766222 11111 111222222 34789999999984  4556666999999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-38  Score=295.17  Aligned_cols=233  Identities=20%  Similarity=0.229  Sum_probs=193.5

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCch-----------HHHHHhHHHH-HHHHhcCCCceeeeecee
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHP-----------VKMVLSAKDN-CKLRELRHPNILQFLGSI  198 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~-----------~~~~~~~~~e-~~l~~l~hpnIv~~~~~~  198 (464)
                      +|++++.||+|.||+|.+|++  .++.||+|++.+.....           ....+..++| .+|++|+|||||+|+.+.
T Consensus        98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL  177 (576)
T KOG0585|consen   98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL  177 (576)
T ss_pred             heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence            599999999999999999998  48999999998653221           1123577889 999999999999999998


Q ss_pred             eeC--CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          199 VLG--EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       199 ~~~--~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      .+.  +.+|||+|||..|.+...-.....+++.+++.|++++..                  |+||+++|++||+|||.+
T Consensus       178 DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs  257 (576)
T KOG0585|consen  178 DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVS  257 (576)
T ss_pred             cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecccee
Confidence            874  579999999999988655444434999999999999976                  999999999999999999


Q ss_pred             hhhccc--------CCCCcCCCCcccccccccC---CC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCC
Q 039021          259 MFYEQI--------HPNQENSQRNDNSSIASNV---LD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPK  326 (464)
Q Consensus       259 ~~~~~~--------~~~~~gt~~y~aPE~~~~~---~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~  326 (464)
                      ......        .....|||.|+|||.+.++   .+ +.+.||||+||+||.|+.|+.||.+......+.++.+.+..
T Consensus       258 ~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~  337 (576)
T KOG0585|consen  258 NEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLE  337 (576)
T ss_pred             eecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCccc
Confidence            866321        1234599999999999773   33 47899999999999999999999998865666666666666


Q ss_pred             ccC-CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          327 FQI-SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       327 ~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ++. +.+.+.+++||+++|.+||++|.+..+|..|.|...
T Consensus       338 fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  338 FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             CCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence            664 347899999999999999999999999999988653

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.2e-37  Score=299.95  Aligned_cols=223  Identities=20%  Similarity=0.250  Sum_probs=182.0

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHh-cCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE-LRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|+++  ++.||+|+++............+..| .++.. .+||||+++++++..++.+++||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999984  77899999986433223334444555 66654 4899999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++.....   .....||+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence            999999988889999999999999986                  999999999999999999864322   22345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|||++|+.||.+.+............+.++ ..+++++.+++.+||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP-RWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHccCCHHHcC
Confidence            99999999999999999999999999999999999988763322222222333333 55889999999999999999999


Q ss_pred             CHH-HHHHHH
Q 039021          353 TFA-AVIITL  361 (464)
Q Consensus       353 t~~-~i~~~l  361 (464)
                      ++. ++++|.
T Consensus       240 ~~~~~l~~h~  249 (316)
T cd05592         240 GVDGDIRQHP  249 (316)
T ss_pred             CChHHHHcCc
Confidence            875 666653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=307.13  Aligned_cols=229  Identities=18%  Similarity=0.188  Sum_probs=190.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||+|++.  ++.||+|++.............+.+| .+|+.++||||+++++++.+++.+|||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            6888999999999999999984  88999999986433334455677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------  265 (464)
                      |+++|+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++......      
T Consensus        82 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  161 (364)
T cd05599          82 YLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR  161 (364)
T ss_pred             CCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccc
Confidence            9999999999988888999999999999986                  9999999999999999987543110      


Q ss_pred             -----------------------------------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 039021          266 -----------------------------------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTN  310 (464)
Q Consensus       266 -----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~  310 (464)
                                                         ....||+.|+|||++....++.++|||||||++|||++|..||..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~  241 (364)
T cd05599         162 ILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS  241 (364)
T ss_pred             cccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence                                               123489999999999999999999999999999999999999987


Q ss_pred             Ccc-chhccccc-cCCCCccC-CCCcHHHHHHHHHHcccCCCCCCC---HHHHHHHHH
Q 039021          311 NSF-DFMHLKSV-NFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPT---FAAVIITLE  362 (464)
Q Consensus       311 ~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt---~~~i~~~l~  362 (464)
                      ... +....+.. .....++. ..+++++.+||.+||. +|.+|++   +.+++.|.+
T Consensus       242 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~  298 (364)
T cd05599         242 DNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF  298 (364)
T ss_pred             CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence            762 22221111 11112221 3478999999999996 8999997   999998854

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.8e-37  Score=301.21  Aligned_cols=224  Identities=19%  Similarity=0.221  Sum_probs=184.5

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|+++  ++.||+|++.............+..| .+++.+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999984  78999999986433233344556666 777766 799999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~~~gt~  272 (464)
                      |+|.+++.....+++..+..++.|++.                  |||++.++.+||+|||+++....   ......||+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence            999999988889999999999999986                  99999999999999999876421   223345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+..............++ ..+++++.+++++||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~  239 (320)
T cd05590         161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP-TWLSQDAVDILKAFMTKNPTMRL  239 (320)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHHcccCHHHCC
Confidence            99999999999999999999999999999999999988763332222222233333 45799999999999999999999


Q ss_pred             CH------HHHHHHHH
Q 039021          353 TF------AAVIITLE  362 (464)
Q Consensus       353 t~------~~i~~~l~  362 (464)
                      ++      .+++.|.+
T Consensus       240 ~~~~~~~~~~~~~h~~  255 (320)
T cd05590         240 GSLTLGGEEAILRHPF  255 (320)
T ss_pred             CCCCCCCHHHHHcCCC
Confidence            98      77777643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=8.8e-38  Score=304.12  Aligned_cols=224  Identities=18%  Similarity=0.215  Sum_probs=188.1

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKG  214 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g  214 (464)
                      +.||+|+||.||+++++  +..||+|++.............+.+| ++++.++||||+++++++...+.++|||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999984  88999999986543334445667778 9999999999999999999999999999999999


Q ss_pred             ChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          215 NLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       215 ~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      +|.+++.....+++..+..++.||+.                   |||++.++.+||+|||+++.....   .....||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence            99999988888999999999999986                   999999999999999998754321   22345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|+|++|..||..................++ ..+++++.+|+.+||+.||++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHHhhcCHHHhC
Confidence            99999999999999999999999999999999999987763322222222233333 55899999999999999999996


Q ss_pred             -----CHHHHHHHHH
Q 039021          353 -----TFAAVIITLE  362 (464)
Q Consensus       353 -----t~~~i~~~l~  362 (464)
                           ++.++++|.+
T Consensus       240 ~~~~~~~~~il~h~~  254 (325)
T cd05594         240 GGGPDDAKEIMQHKF  254 (325)
T ss_pred             CCCCCCHHHHhcCCC
Confidence                 8999998854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-39  Score=280.02  Aligned_cols=233  Identities=15%  Similarity=0.116  Sum_probs=195.8

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +..|.+-+.||+|.|+.||++.+.  |+.+|+|++........ ..+.+.+| ++-+.|+|||||++.+.+.+.+..|||
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            346888899999999999999884  99999999987655544 46678888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcccC-
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~~~-  265 (464)
                      +|+++||+|..-|-.+..+++..+-.+++||+.                  |+|+.+.   --+||+|||+|..+.... 
T Consensus        89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~  168 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA  168 (355)
T ss_pred             EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence            999999999877766678899999999999987                  7787543   349999999999887433 


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCc---cCCCCcHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF---QISRCPNRLKQLIA  341 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~  341 (464)
                       ....|||.|||||++...+|+..+|||+-||+||-|+.|..||.+.+...+...+......+   ..+.++++.++|++
T Consensus       169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvr  248 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIR  248 (355)
T ss_pred             cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHH
Confidence             34459999999999999999999999999999999999999999976333333222222222   22668999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||..||.+|.|+.|.++|.|-.
T Consensus       249 rML~~dP~kRIta~EAL~HpWi~  271 (355)
T KOG0033|consen  249 RMLTVNPKKRITADEALKHPWIC  271 (355)
T ss_pred             HHhccChhhhccHHHHhCCchhc
Confidence            99999999999999999998754

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3e-37  Score=300.29  Aligned_cols=226  Identities=16%  Similarity=0.178  Sum_probs=184.2

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHH---HhcCCCceeeeeceeeeCCceEEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKL---RELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l---~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      |++.+.||+|+||.||+|.++  ++.||+|+++..........+.+..| +++   +.++||||+++++++.+.+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            567889999999999999984  88999999986433333344556666 554   567899999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~  266 (464)
                      |||+++|+|..++.. +.+++..+..++.|++.                  |||++.++.+||+|||+++....   ...
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS  159 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence            999999999988865 47999999999999986                  99999999999999999875432   223


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ...|++.|+|||++.+..++.++|||||||++|||++|+.||.+..............+.++ ..+++++.++|.+||+.
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~~L~~  238 (324)
T cd05589         160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP-RFLSREAISIMRRLLRR  238 (324)
T ss_pred             ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHhhc
Confidence            34599999999999999999999999999999999999999988763222222222223333 55899999999999999


Q ss_pred             CCCCCC-----CHHHHHHHH
Q 039021          347 DPSKRP-----TFAAVIITL  361 (464)
Q Consensus       347 dp~~Rp-----t~~~i~~~l  361 (464)
                      ||.+||     ++.++++|.
T Consensus       239 dP~~R~~~~~~~~~~l~~~~  258 (324)
T cd05589         239 NPERRLGSGEKDAEDVKKQP  258 (324)
T ss_pred             CHhHcCCCCCCCHHHHhhCC
Confidence            999999     577787764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.7e-37  Score=299.58  Aligned_cols=228  Identities=16%  Similarity=0.181  Sum_probs=188.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC-CceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH-PNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h-pnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|++.+.||+|+||.||+|+++  ++.||+|++...........+.+..| ++++.++| ++|+++++++.+.+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4788899999999999999985  67899999986543334445567778 88998876 56889999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~  267 (464)
                      ||+++|+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++....   ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT  160 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence            99999999999988888999999999999986                  99999999999999999875321   1223


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..............+.++ ..+++++.+++.+||..|
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~~  239 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP-KSLSKEAVSICKGLLTKH  239 (324)
T ss_pred             ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhcC
Confidence            4599999999999999999999999999999999999999987763322222222333333 558999999999999999


Q ss_pred             CCCCCCH-----HHHHHHH
Q 039021          348 PSKRPTF-----AAVIITL  361 (464)
Q Consensus       348 p~~Rpt~-----~~i~~~l  361 (464)
                      |.+|++.     .++++|.
T Consensus       240 P~~R~~~~~~~~~~~~~hp  258 (324)
T cd05587         240 PAKRLGCGPTGERDIREHA  258 (324)
T ss_pred             HHHcCCCCCCCHHHHhcCC
Confidence            9999976     6777663

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.8e-37  Score=299.38  Aligned_cols=224  Identities=20%  Similarity=0.200  Sum_probs=185.3

Q ss_pred             cccccceeeeeEEeEE-----eCceEEEEEeeccCC-chHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          138 SMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIY-HPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +.||+|+||.||+++.     .++.||+|+++.... ........+.+| .+|+.++||||+++++++..++.+|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6899999999999986     378899999986422 122334566788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCc
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQE  269 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~  269 (464)
                      +++|+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++.....   .....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC  161 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccC
Confidence            999999999988888999999999999986                  999999999999999998754321   22345


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      ||+.|+|||++.+..++.++|||||||++|||++|+.||..................++ ..+++++.+||.+||+.||+
T Consensus       162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~  240 (323)
T cd05584         162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP-PYLTPEARDLLKKLLKRNPS  240 (323)
T ss_pred             CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHcccCHh
Confidence            99999999999998899999999999999999999999987763222121112223333 55789999999999999999


Q ss_pred             CCC-----CHHHHHHHHH
Q 039021          350 KRP-----TFAAVIITLE  362 (464)
Q Consensus       350 ~Rp-----t~~~i~~~l~  362 (464)
                      +||     ++.+++.|.+
T Consensus       241 ~R~~~~~~~~~~l~~h~~  258 (323)
T cd05584         241 SRLGAGPGDAAEVQSHPF  258 (323)
T ss_pred             HcCCCCCCCHHHHhcCCC
Confidence            999     8999988754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.6e-37  Score=299.56  Aligned_cols=227  Identities=17%  Similarity=0.191  Sum_probs=187.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|.+.+.||+|+||.||+|+++  ++.||+|++.+...........+..| .++..+ +||+|+++++++.+.+.+++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999985  67999999986543333344455666 777776 6899999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~  267 (464)
                      ||+++|+|.+++...+.+++..+..++.|++.                  |||+++++.+||+|||+++....   ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~  160 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT  160 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence            99999999999988888999999999999986                  99999999999999999976432   1223


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||.+................++ ..+++++.+++.+||+.|
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~l~~~  239 (323)
T cd05616         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP-KSMSKEAVAICKGLMTKH  239 (323)
T ss_pred             CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CcCCHHHHHHHHHHcccC
Confidence            4599999999999999999999999999999999999999988763322222222233333 568999999999999999


Q ss_pred             CCCCCCH-----HHHHHH
Q 039021          348 PSKRPTF-----AAVIIT  360 (464)
Q Consensus       348 p~~Rpt~-----~~i~~~  360 (464)
                      |++|++.     .++++|
T Consensus       240 p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         240 PGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             HHhcCCCCCCCHHHHhcC
Confidence            9999974     667665

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3.3e-37  Score=299.60  Aligned_cols=224  Identities=16%  Similarity=0.189  Sum_probs=185.8

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|+++  ++.||+|+++............+..| ++++.+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999985  77999999986533334445566677 888766 899999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++.....   .....||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence            999999988888999999999999986                  999999999999999998764322   22345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+..............++ ..+++++.+++.+||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP-VWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhccCHHHcC
Confidence            99999999999999999999999999999999999988763332222222222222 45789999999999999999999


Q ss_pred             -------CHHHHHHHHH
Q 039021          353 -------TFAAVIITLE  362 (464)
Q Consensus       353 -------t~~~i~~~l~  362 (464)
                             ++.++++|.+
T Consensus       240 ~~~~~~~~~~~~~~hp~  256 (321)
T cd05591         240 GCVASQGGEDAIKQHPF  256 (321)
T ss_pred             CCCCCCCCHHHHhcCCc
Confidence                   8888988854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.2e-37  Score=299.23  Aligned_cols=224  Identities=19%  Similarity=0.229  Sum_probs=186.1

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|+++  ++.||+|++++...........+..| .+++.+ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999984  77999999986543333445566677 888877 799999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.|++.                  |||+++++.+||+|||+++....   ......||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence            999999988889999999999999986                  99999999999999999875322   122345899


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+............+.++ ..+++++.+||.+||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP-RWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CcCCHHHHHHHHHHccCCHHHcC
Confidence            99999999999999999999999999999999999987663322222222233333 55799999999999999999999


Q ss_pred             CH-----HHHHHHHH
Q 039021          353 TF-----AAVIITLE  362 (464)
Q Consensus       353 t~-----~~i~~~l~  362 (464)
                      |+     .+++.|-+
T Consensus       240 s~~~~~~~~ll~~~~  254 (318)
T cd05570         240 GCLPTGEQDIKGHPF  254 (318)
T ss_pred             CCCCCCHHHHhcCCC
Confidence            99     88887743

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=4.5e-37  Score=303.68  Aligned_cols=229  Identities=17%  Similarity=0.158  Sum_probs=187.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||+|+++  ++.||+|++.............+..| .++++++||||+++++.+.+...+|||||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            6888999999999999999984  88999999986433334455678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-------  264 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-------  264 (464)
                      |++||+|.+++.+.+.+++..+..++.|++.                  |||++.++.+||+|||+++.....       
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~  161 (363)
T cd05628          82 FLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYR  161 (363)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccc
Confidence            9999999999988889999999999999986                  999999999999999998754321       


Q ss_pred             -------------------------------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc
Q 039021          265 -------------------------------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF  313 (464)
Q Consensus       265 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~  313 (464)
                                                     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~  241 (363)
T cd05628         162 NLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (363)
T ss_pred             cccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCH
Confidence                                           0123599999999999999999999999999999999999999987663


Q ss_pred             c-hhccccc-cCCCCccC-CCCcHHHHHHHHHHcc--cCCCCCCCHHHHHHHH
Q 039021          314 D-FMHLKSV-NFEPKFQI-SRCPNRLKQLIAQCTN--KDPSKRPTFAAVIITL  361 (464)
Q Consensus       314 ~-~~~~~~~-~~~~~~~~-~~~~~~~~~li~~cl~--~dp~~Rpt~~~i~~~l  361 (464)
                      . ....+.. .....+++ ..+++++.+++.+++.  .++..||++.+|++|-
T Consensus       242 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp  294 (363)
T cd05628         242 QETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNP  294 (363)
T ss_pred             HHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence            2 2222211 11222222 3478999999998664  2333568999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=4.5e-37  Score=299.55  Aligned_cols=224  Identities=14%  Similarity=0.189  Sum_probs=185.0

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|+++  ++.||+|+++............+..| .+++++ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46899999999999984  88999999987544444455667788 888888 799999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++...   .......||+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence            999999988889999999999999986                  9999999999999999997532   1223345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---------cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---------FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      .|+|||++.+..++.++|||||||++|+|++|+.||....         ...............+ ..+++++.++|.+|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~li~~~  239 (329)
T cd05588         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP-RSLSVKASSVLKGF  239 (329)
T ss_pred             cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC-CCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999996422         1111111222223333 55789999999999


Q ss_pred             cccCCCCCCC------HHHHHHHHH
Q 039021          344 TNKDPSKRPT------FAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt------~~~i~~~l~  362 (464)
                      |+.||.+|||      +.++++|-+
T Consensus       240 L~~dP~~R~~~~~~~~~~~i~~hp~  264 (329)
T cd05588         240 LNKDPKERLGCHPQTGFRDIKSHPF  264 (329)
T ss_pred             hccCHHHcCCCCCCCCHHHHhcCCC
Confidence            9999999997      678887754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-37  Score=305.43  Aligned_cols=229  Identities=19%  Similarity=0.229  Sum_probs=192.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|++.  ++.||+|+++............+.+| .+++.++||||+++++++.+++.+++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            6888999999999999999985  89999999986543333455678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------  265 (464)
                      |+++|+|.+++.+.+.+++..++.++.||+.                  |||++.++.+||+|||+++......      
T Consensus        82 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~  161 (350)
T cd05573          82 YMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYL  161 (350)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccc
Confidence            9999999999988889999999999999986                  9999999999999999998765332      


Q ss_pred             --------------------------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccc
Q 039021          266 --------------------------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLK  319 (464)
Q Consensus       266 --------------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~  319 (464)
                                                ....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~  241 (350)
T cd05573         162 NDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNK  241 (350)
T ss_pred             cccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHH
Confidence                                      223499999999999999999999999999999999999999988762221111


Q ss_pred             ccc--CCCCcc-CCCCcHHHHHHHHHHcccCCCCCCC-HHHHHHHHH
Q 039021          320 SVN--FEPKFQ-ISRCPNRLKQLIAQCTNKDPSKRPT-FAAVIITLE  362 (464)
Q Consensus       320 ~~~--~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt-~~~i~~~l~  362 (464)
                      ...  ....++ ...+++++.+||.+||. ||.+||+ +.++++|.+
T Consensus       242 i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~  287 (350)
T cd05573         242 IINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF  287 (350)
T ss_pred             HhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence            111  111111 13379999999999997 9999999 999999854

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-37  Score=294.97  Aligned_cols=228  Identities=21%  Similarity=0.310  Sum_probs=187.4

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMIL  206 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~l  206 (464)
                      ..|+.+++||+|.||.||+|++  +|+.||+|.+..+... +.......+| .+|++|+||||++|.+...+.  ..+||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            3589999999999999999998  4899999999976433 3334456677 999999999999999999876  68999


Q ss_pred             EEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |+|||++ ||.-++.. .-.|++.++..|+.|++.                  |||||.+|++||+|||||+++....  
T Consensus       196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~  274 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA  274 (560)
T ss_pred             EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence            9999998 99988876 458999999999999986                  9999999999999999999876332  


Q ss_pred             --CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc--c-----------------c
Q 039021          266 --PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS--V-----------------N  322 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~--~-----------------~  322 (464)
                        +...-|..|+|||++.+ ..|+.++|+||.||||.||+.|++.|.+.+ .+.++.+.  .                 .
T Consensus       275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~  354 (560)
T KOG0600|consen  275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI  354 (560)
T ss_pred             ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence              33347999999999987 789999999999999999999999999876 22222110  0                 0


Q ss_pred             CCCCcc--------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          323 FEPKFQ--------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       323 ~~~~~~--------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .++..+        ...+|+...+|+..+|..||++|.|+.+++++=
T Consensus       355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se  401 (560)
T KOG0600|consen  355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE  401 (560)
T ss_pred             cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc
Confidence            000000        034678899999999999999999999998763

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=3.6e-37  Score=299.56  Aligned_cols=223  Identities=18%  Similarity=0.216  Sum_probs=181.7

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|+++  |+.||+|++.............+..|  .+++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46999999999999984  88999999986433223333344444  567889999999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++.....   .....||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence            999999988889999999999999986                  999999999999999998764322   22345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|||++|..||...+...............+ ..+++++.++|.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~  239 (323)
T cd05575         161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK-PNISVSARHLLEGLLQKDRTKRL  239 (323)
T ss_pred             hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhcCHHhCC
Confidence            99999999999999999999999999999999999988763322222222223332 45799999999999999999999


Q ss_pred             CH----HHHHHHH
Q 039021          353 TF----AAVIITL  361 (464)
Q Consensus       353 t~----~~i~~~l  361 (464)
                      ++    .+++.|.
T Consensus       240 ~~~~~~~~il~~~  252 (323)
T cd05575         240 GAKDDFLEIKNHV  252 (323)
T ss_pred             CCCCCHHHHHcCC
Confidence            87    4666553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=7e-37  Score=291.77  Aligned_cols=228  Identities=23%  Similarity=0.327  Sum_probs=189.6

Q ss_pred             ccccccccccceeeeeEEeEEeC-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRG-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      +|++.+.||+|+||.||+|.+.+       ..||+|.+....  .......+.+| .++++++||||+++++++...+..
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            68889999999999999998742       569999987542  23445678889 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          205 ILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      +++|||+++|+|.+++...                ..+++..++.++.|++.                  ||++++++.+
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE
Confidence            9999999999999999754                45788899999999986                  9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccC
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~  323 (464)
                      ||+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.+... +....+....
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~  243 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ  243 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999998653221     12336788999999988899999999999999999998 9999987663 3333322322


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      .+. .+..+|+++.+|+.+||+.||++||++.+|+++|+.
T Consensus       244 ~~~-~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         244 LLP-CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             cCC-CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            233 236689999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=4.7e-37  Score=297.64  Aligned_cols=223  Identities=19%  Similarity=0.232  Sum_probs=181.6

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHh-cCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE-LRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|+++  ++.||+|+++............+..| .+++. ++||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999985  77899999986432222333445556 67765 5999999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~~~gt~  272 (464)
                      |+|.+++.....+++.++..++.|++.                  |||++.++.+||+|||+++....   ......||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence            999999988778999999999999986                  99999999999999999875422   122345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|||++|..||................+.++ ..++.++.+++.+||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP-RWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-ccCCHHHHHHHHHHhccCHhhcC
Confidence            99999999999999999999999999999999999987763222222222223333 45789999999999999999999


Q ss_pred             CHH-HHHHHH
Q 039021          353 TFA-AVIITL  361 (464)
Q Consensus       353 t~~-~i~~~l  361 (464)
                      ++. ++++|.
T Consensus       240 ~~~~~l~~h~  249 (316)
T cd05619         240 GVKGDIRQHP  249 (316)
T ss_pred             CChHHHHcCc
Confidence            996 777663

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.8e-37  Score=297.62  Aligned_cols=223  Identities=19%  Similarity=0.240  Sum_probs=182.2

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHh-cCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE-LRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|+++  |..||+|+++............+..| .++.. ++||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999984  78999999986432222333445556 67765 4899999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~~~~gt~  272 (464)
                      |+|.+++..++.+++..+..++.|+++                  |||++.++.+||+|||+++...   .......||+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence            999999988888999999999999986                  9999999999999999987532   1223445999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|||++|..||................+.++ ..++.++.+++.+||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~R~  239 (316)
T cd05620         161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP-RWITKESKDILEKLFERDPTRRL  239 (316)
T ss_pred             CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHccCCHHHcC
Confidence            99999999999999999999999999999999999987763322222222233333 45789999999999999999999


Q ss_pred             CH-HHHHHHH
Q 039021          353 TF-AAVIITL  361 (464)
Q Consensus       353 t~-~~i~~~l  361 (464)
                      ++ +++++|.
T Consensus       240 ~~~~~~~~h~  249 (316)
T cd05620         240 GVVGNIRGHP  249 (316)
T ss_pred             CChHHHHcCC
Confidence            97 4677664

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.6e-37  Score=285.93  Aligned_cols=229  Identities=21%  Similarity=0.221  Sum_probs=197.0

Q ss_pred             ccccccccccceeeeeEEeEEeC--ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRG--TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|++++.||.|.-|+||+++.++  ..+|+|++.+......+...+...| +||+.++||.++.||..|+.+...|+|||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            58899999999999999999974  7999999998877767777788889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc------
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ------  263 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~------  263 (464)
                      ||+||+|+.+.+++  +.+++..++.|+..++.                  |||+.++|++.|+||.++.....      
T Consensus       158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~  237 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK  237 (459)
T ss_pred             cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence            99999999888763  68999999999999864                  99999999999999988643110      


Q ss_pred             ---------------------------c-C-------------------------CCCcCCCCcccccccccCCCCCccc
Q 039021          264 ---------------------------I-H-------------------------PNQENSQRNDNSSIASNVLDDTKKD  290 (464)
Q Consensus       264 ---------------------------~-~-------------------------~~~~gt~~y~aPE~~~~~~~~~~~D  290 (464)
                                                 . .                         ....||-.|.|||++.+...+.++|
T Consensus       238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD  317 (459)
T KOG0610|consen  238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD  317 (459)
T ss_pred             cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence                                       0 0                         0112899999999999999999999


Q ss_pred             chhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccC-CCCcHHHHHHHHHHcccCCCCCCC----HHHHHHHH
Q 039021          291 ICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPT----FAAVIITL  361 (464)
Q Consensus       291 vwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt----~~~i~~~l  361 (464)
                      +|+|||++|||+.|..||.+.+.......+....+.++. +.++..+++||+++|.+||.+|..    +.||-+|-
T Consensus       318 WWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~Hp  393 (459)
T KOG0610|consen  318 WWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHP  393 (459)
T ss_pred             HHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCc
Confidence            999999999999999999999855444444455666654 357899999999999999999997    88998873

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=7.1e-37  Score=302.95  Aligned_cols=230  Identities=21%  Similarity=0.304  Sum_probs=187.1

Q ss_pred             cccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGE  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~  202 (464)
                      .+|.+.+.||+|+||.||+|++.       +..||+|+++....  ......+.+| .+++.+ +|||||+++++|...+
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            37888999999999999999863       34799999986432  3345678889 999999 8999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc-----------------------------------------------------------
Q 039021          203 EMILITEYLPKGNLKGILSKK-----------------------------------------------------------  223 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~-----------------------------------------------------------  223 (464)
                      .+++|||||++|+|.++++..                                                           
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            999999999999999998542                                                           


Q ss_pred             -----------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-----CCc
Q 039021          224 -----------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-----NQE  269 (464)
Q Consensus       224 -----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-----~~~  269 (464)
                                 .++++..++.++.||++                  |||+++++.+||+|||+++.......     ...
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~  275 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR  275 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence                       24788889999999986                  99999999999999999986543221     122


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hh-ccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FM-HLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ++..|||||++.+..++.++|||||||++|||++ |+.||...... .. ........+.. +...|+++.+++.+||+.
T Consensus       276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~  354 (374)
T cd05106         276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR-PDFAPPEIYSIMKMCWNL  354 (374)
T ss_pred             CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC-CCCCCHHHHHHHHHHcCC
Confidence            5668999999998999999999999999999997 99999876521 11 11222222222 244689999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||++|||+.+|++.|+.+
T Consensus       355 dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         355 EPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-38  Score=282.28  Aligned_cols=227  Identities=18%  Similarity=0.210  Sum_probs=201.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|...+.||+|.||+|-+++.+  ++.+|+|++++..+..++....-..| ++|+..+||++..+...|+..+.+|+|||
T Consensus       169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMe  248 (516)
T KOG0690|consen  169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVME  248 (516)
T ss_pred             hhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEE
Confidence            6788899999999999999985  99999999999887777777888888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh---cccCCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY---EQIHPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~---~~~~~~~  268 (464)
                      |+.||.|+-+|.+...+++..++.|...|+.                  |+|+|.+|++||.|||+++.-   +....+.
T Consensus       249 yanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTF  328 (516)
T KOG0690|consen  249 YANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTF  328 (516)
T ss_pred             EccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccc
Confidence            9999999999988889999999999888865                  999999999999999999863   3445678


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      ||||.|+|||++....|+.++|+|.+||+||||++|+.||.+.+.+.+...+.-....+| ..++++++.|+..+|.+||
T Consensus       329 CGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP-r~ls~eAktLLsGLL~kdP  407 (516)
T KOG0690|consen  329 CGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP-RTLSPEAKTLLSGLLKKDP  407 (516)
T ss_pred             cCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC-ccCCHHHHHHHHHHhhcCh
Confidence            899999999999999999999999999999999999999998875444444433455665 6689999999999999999


Q ss_pred             CCCCC-----HHHHHHH
Q 039021          349 SKRPT-----FAAVIIT  360 (464)
Q Consensus       349 ~~Rpt-----~~~i~~~  360 (464)
                      .+|..     +.||.+|
T Consensus       408 ~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  408 KKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             HhhcCCCchhHHHHHhh
Confidence            99963     6777776

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=5.1e-37  Score=293.42  Aligned_cols=228  Identities=15%  Similarity=0.154  Sum_probs=184.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|+++  ++.||+|+++..... ......+.+| .++++++||||+++++++..++..++|||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            5888999999999999999985  789999999864322 2334567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~~  267 (464)
                      |++++.+..+......+++..++.++.|++.                  ||+++.++.+||+|||+++......    ..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            9999877666555568999999999999986                  9999999999999999998765322    22


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc---------------------cCCC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV---------------------NFEP  325 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~---------------------~~~~  325 (464)
                      ..|++.|+|||++.+..++.++|||||||++|||++|+.||...+. ........                     ...+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP  240 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence            3489999999999988899999999999999999999999987541 11000000                     0000


Q ss_pred             Ccc---------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          326 KFQ---------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       326 ~~~---------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ...         ...+|.++.+||++||+.||++|||++++++|.
T Consensus       241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp  285 (287)
T cd07848         241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP  285 (287)
T ss_pred             cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence            000         023678899999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=6.9e-37  Score=304.52  Aligned_cols=229  Identities=14%  Similarity=0.129  Sum_probs=187.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|.+++.||+|+||+||+|++.  ++.||+|++.............+.+| .++++++|||||++++++.+++.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            4788899999999999999984  78999999986433334556678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc--------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ--------  263 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~--------  263 (464)
                      ||++|+|.+++.+.+.+++..+..++.||+.                  |||++.++.+||+|||+++....        
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~  161 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence            9999999999988788999999999999976                  99999999999999999753210        


Q ss_pred             ------------------------------------------cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHH
Q 039021          264 ------------------------------------------IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQM  301 (464)
Q Consensus       264 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  301 (464)
                                                                ......||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el  241 (382)
T cd05625         162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  241 (382)
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence                                                      00123589999999999999999999999999999999


Q ss_pred             HhCCCCCCCCccc-hhccccc-cCCCCcc-CCCCcHHHHHHHHHHcccCCCCCCC---HHHHHHHHH
Q 039021          302 LEGKHLQTNNSFD-FMHLKSV-NFEPKFQ-ISRCPNRLKQLIAQCTNKDPSKRPT---FAAVIITLE  362 (464)
Q Consensus       302 ~~g~~p~~~~~~~-~~~~~~~-~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt---~~~i~~~l~  362 (464)
                      ++|+.||...+.. ....+.. ......+ ...+++++.++|.+++ .+|.+|++   +.+++.|.+
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~  307 (382)
T cd05625         242 LVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPF  307 (382)
T ss_pred             HhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCC
Confidence            9999999876622 1111111 1112222 2457899999999976 59999987   899988754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-37  Score=305.55  Aligned_cols=229  Identities=16%  Similarity=0.151  Sum_probs=187.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||++++.  ++.||+|++.............+.+| +++++++||||+++++++.+.+.+|||||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            6888999999999999999984  88999999976433334455678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-------  264 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-------  264 (464)
                      |+++|+|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++.....       
T Consensus        82 ~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  161 (377)
T cd05629          82 FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQ  161 (377)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence            9999999999988888999999999999986                  999999999999999999632110       


Q ss_pred             -------------------------------------------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHH
Q 039021          265 -------------------------------------------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQM  301 (464)
Q Consensus       265 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  301 (464)
                                                                 .....||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  241 (377)
T cd05629         162 KLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFEC  241 (377)
T ss_pred             ccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhh
Confidence                                                       0023589999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcc-chhccccc-cCCCCccC-CCCcHHHHHHHHHHcccCCCCC---CCHHHHHHHHH
Q 039021          302 LEGKHLQTNNSF-DFMHLKSV-NFEPKFQI-SRCPNRLKQLIAQCTNKDPSKR---PTFAAVIITLE  362 (464)
Q Consensus       302 ~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~li~~cl~~dp~~R---pt~~~i~~~l~  362 (464)
                      ++|..||..... +....+.. .....++. ..++.++.+||.+||. +|.+|   +++.+++.|.+
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~  307 (377)
T cd05629         242 LIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF  307 (377)
T ss_pred             hcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence            999999987652 22221111 11222222 2478999999999997 66665   59999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=2e-36  Score=301.19  Aligned_cols=233  Identities=18%  Similarity=0.251  Sum_probs=188.7

Q ss_pred             ccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIV  199 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~  199 (464)
                      ....+|.+++.||+|+||.||+|.+.       +..||+|+++...  .....+.+.+| ++|++++ |||||++++++.
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            33457899999999999999999873       2369999997542  23345678889 9999996 999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhhc--------------------------------------------------------
Q 039021          200 LGEEMILITEYLPKGNLKGILSKK--------------------------------------------------------  223 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~~--------------------------------------------------------  223 (464)
                      +.+..|||||||++|+|.+++...                                                        
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM  191 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence            999999999999999999988542                                                        


Q ss_pred             ----------------------------------------cCCCHHHHHHHHHHHHh------------------hhccc
Q 039021          224 ----------------------------------------VRLDLPTALRYALDIAR------------------NLLQD  245 (464)
Q Consensus       224 ----------------------------------------~~l~~~~~~~~~~qi~~------------------Nill~  245 (464)
                                                              ..+++.++..++.|+++                  |||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~  271 (400)
T cd05105         192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence                                                    23677888899999986                  99999


Q ss_pred             CCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc--chhc
Q 039021          246 EGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF--DFMH  317 (464)
Q Consensus       246 ~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~--~~~~  317 (464)
                      .++.+||+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.....  ....
T Consensus       272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~  351 (400)
T cd05105         272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN  351 (400)
T ss_pred             CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence            99999999999998654321     12236788999999998999999999999999999997 9999987542  1222


Q ss_pred             cccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .......+.. +..++.++.+++.+||+.||++|||+.+|.+.|..+
T Consensus       352 ~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         352 KIKSGYRMAK-PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHhcCCCCCC-CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            2222223332 256889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-37  Score=309.86  Aligned_cols=233  Identities=18%  Similarity=0.253  Sum_probs=193.4

Q ss_pred             ccccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeece-ee
Q 039021          125 VNFDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGS-IV  199 (464)
Q Consensus       125 ~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~-~~  199 (464)
                      ..+.+...++++.+.|.+|||+.||+|+..  |..||+|++-.   .++...+.+++| ++|++|. |||||.++|. ..
T Consensus        30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~  106 (738)
T KOG1989|consen   30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAI  106 (738)
T ss_pred             eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence            446666778999999999999999999985  48999999886   357778889999 9999996 9999999993 32


Q ss_pred             e------CCceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh--------------------hhcccCCCcee
Q 039021          200 L------GEEMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR--------------------NLLQDEGDHLK  251 (464)
Q Consensus       200 ~------~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~--------------------Nill~~~~~~k  251 (464)
                      .      .-.++|.||||.||.|-+++..  ...|++.++++|+.|+++                    ||||+.+|..|
T Consensus       107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~K  186 (738)
T KOG1989|consen  107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYK  186 (738)
T ss_pred             cccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEE
Confidence            2      1257899999999999999974  356999999999999987                    99999999999


Q ss_pred             EecchhhhhhcccC------------CCCcCCCCccccccc---ccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cch
Q 039021          252 IGEYWVQMFYEQIH------------PNQENSQRNDNSSIA---SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDF  315 (464)
Q Consensus       252 l~DFG~a~~~~~~~------------~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~  315 (464)
                      |||||.|...-...            .....|+.|+|||++   .+...+.|+|||||||+||-|+....||+... ..+
T Consensus       187 LCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI  266 (738)
T KOG1989|consen  187 LCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI  266 (738)
T ss_pred             eCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE
Confidence            99999987543221            112289999999987   45778999999999999999999999998764 322


Q ss_pred             hccccccCCCCccC-CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          316 MHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       316 ~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +.     ....+|+ +..+..+.+||+.||+.||++||++-+++.++..+.
T Consensus       267 ln-----g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~  312 (738)
T KOG1989|consen  267 LN-----GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA  312 (738)
T ss_pred             Ee-----ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence            22     2233333 568999999999999999999999999999987774

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-38  Score=301.96  Aligned_cols=227  Identities=18%  Similarity=0.178  Sum_probs=199.3

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|.-.+.||.|+||.||.|++  +...||||.+.....-..+..+.+..| +.|++++|||+|.+.|+|..+...+|||
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            3577788999999999999998  478999999987665555667778888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCc
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQE  269 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~  269 (464)
                      |||-| +-.|++.- ++++-+-++..|+.+.+.                  |||+++.|.|||+|||.|.... ...++.
T Consensus       106 EYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~-PAnsFv  183 (948)
T KOG0577|consen  106 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA-PANSFV  183 (948)
T ss_pred             HHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-chhccc
Confidence            99975 77777754 468899999888888765                  9999999999999999987654 344778


Q ss_pred             CCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          270 NSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       270 gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      |||+|||||++.   ++.|+-|+|||||||+..||...++|+.+.+ ...++.+..+..|.++...++..+.+|+..||+
T Consensus       184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLq  263 (948)
T KOG0577|consen  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQ  263 (948)
T ss_pred             CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHh
Confidence            999999999985   4889999999999999999999999998888 667777777888888888899999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      +-|.+|||..+++.|
T Consensus       264 KipqeRptse~ll~H  278 (948)
T KOG0577|consen  264 KIPQERPTSEELLKH  278 (948)
T ss_pred             hCcccCCcHHHHhhc
Confidence            999999999988876

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1e-36  Score=268.15  Aligned_cols=228  Identities=20%  Similarity=0.251  Sum_probs=187.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|...++||+|.||.||+|++.  |+.||+|.++.....+. ......+| ..|+.++||||+.++++|...+.+.||+|
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            6788899999999999999984  99999999997643322 23345667 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC---
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN---  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~---  267 (464)
                      |++. ||..+|+.+ ..++..++..|+.++++                  |+|++++|.+||+|||+|+.+......   
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~  160 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH  160 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc
Confidence            9987 999999764 67899999999999987                  999999999999999999998854432   


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccc-c-ccC--------------------
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLK-S-VNF--------------------  323 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~-~-~~~--------------------  323 (464)
                      ..-|..|+|||.+.+ ..|+..+|+||.||++.||+-|.+-|++.+ .+.+..+ . .+.                    
T Consensus       161 ~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~  240 (318)
T KOG0659|consen  161 QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQ  240 (318)
T ss_pred             ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhc
Confidence            348999999999877 789999999999999999999998888766 2211111 0 000                    


Q ss_pred             CCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          324 EPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       324 ~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .|..+    -+.++..+.+|+.++|..||.+|+|++|.++|-.
T Consensus       241 ~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y  283 (318)
T KOG0659|consen  241 FPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPY  283 (318)
T ss_pred             CCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence            00000    0335778899999999999999999999998854

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.5e-36  Score=284.43  Aligned_cols=232  Identities=18%  Similarity=0.264  Sum_probs=193.1

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++  .++.||+|.+........+....+.+| ++++.++||||+++++++.+.+..++|||
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE   82 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence            688889999999999999998  488999999875443445556678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          210 YLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |+++|+|.+++..    ...+++..+..++.|+++                  ||+++.++.+||+|||++.......  
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~  162 (267)
T cd08228          83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  162 (267)
T ss_pred             ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence            9999999988853    345899999999999987                  9999999999999999988765322  


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                       ....|++.|+|||.+.+..++.++|+||||+++|||++|..||.....   ...........++.+...++..+.++|.
T Consensus       163 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08228         163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVS  242 (267)
T ss_pred             HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence             234588999999999988899999999999999999999999966542   2222222222333333457889999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||..+|++||++.++++.++.+
T Consensus       243 ~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         243 MCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHCCCCcccCcCHHHHHHHHHHh
Confidence            99999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4.7e-37  Score=305.12  Aligned_cols=229  Identities=13%  Similarity=0.114  Sum_probs=187.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  ++.||+|++.............+.+| ++|++++||||+++++.+.+++.+|+|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            5888999999999999999984  88999999976433233445667888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc--------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ--------  263 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~--------  263 (464)
                      ||++|+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+|+.+..        
T Consensus        82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~  161 (376)
T cd05598          82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (376)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence            9999999999988888999999999999976                  99999999999999999753210        


Q ss_pred             --------------------------------------cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCC
Q 039021          264 --------------------------------------IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK  305 (464)
Q Consensus       264 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~  305 (464)
                                                            ......||+.|||||++.+..++.++|||||||++|||++|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~  241 (376)
T cd05598         162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ  241 (376)
T ss_pred             cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence                                                  001235999999999999999999999999999999999999


Q ss_pred             CCCCCCccchh-ccccc-cCCCCcc-CCCCcHHHHHHHHHHcccCCCCCC---CHHHHHHHHH
Q 039021          306 HLQTNNSFDFM-HLKSV-NFEPKFQ-ISRCPNRLKQLIAQCTNKDPSKRP---TFAAVIITLE  362 (464)
Q Consensus       306 ~p~~~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rp---t~~~i~~~l~  362 (464)
                      .||........ ..+.. ......+ ...+++++.++|.+|+ .+|.+|+   |+.+++.|.+
T Consensus       242 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~  303 (376)
T cd05598         242 PPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF  303 (376)
T ss_pred             CCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence            99987762221 11111 1111111 1357899999999977 5999999   8999998854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.4e-36  Score=296.08  Aligned_cols=223  Identities=14%  Similarity=0.205  Sum_probs=182.7

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|+++  ++.||+|++++...........+..| .++.++ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999984  78999999987544444455667777 777766 899999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~~~gt~  272 (464)
                      |+|..++...+.+++..+..++.|++.                  |||++.++.+||+|||+++....   ......||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence            999999988889999999999999986                  99999999999999999976432   122345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---------cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---------FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      .|+|||++.+..++.++|||||||++|+|++|+.||....         ..............++ ..++.++.++|.+|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~ll~~~  239 (329)
T cd05618         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP-RSLSVKAASVLKSF  239 (329)
T ss_pred             cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999996321         1111111222223333 55789999999999


Q ss_pred             cccCCCCCCC------HHHHHHHH
Q 039021          344 TNKDPSKRPT------FAAVIITL  361 (464)
Q Consensus       344 l~~dp~~Rpt------~~~i~~~l  361 (464)
                      |+.||++||+      +.++++|.
T Consensus       240 L~~dP~~R~~~~~~~~~~~i~~hp  263 (329)
T cd05618         240 LNKDPKERLGCHPQTGFADIQGHP  263 (329)
T ss_pred             hcCCHHHcCCCCCCCCHHHHhcCC
Confidence            9999999998      46887774

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.1e-36  Score=290.50  Aligned_cols=229  Identities=22%  Similarity=0.273  Sum_probs=182.8

Q ss_pred             cccccccccccceeeeeEEeEEe------------------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCcee
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR------------------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNIL  192 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~------------------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv  192 (464)
                      .+|.+.+.||+|+||.||+|.++                  +..||+|++....  .......+.+| .+|++++||||+
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence            46888899999999999999852                  3369999998642  23445678889 999999999999


Q ss_pred             eeeceeeeCCceEEEEEecCCCChHHHHhhc-------------------cCCCHHHHHHHHHHHHh-------------
Q 039021          193 QFLGSIVLGEEMILITEYLPKGNLKGILSKK-------------------VRLDLPTALRYALDIAR-------------  240 (464)
Q Consensus       193 ~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-------------------~~l~~~~~~~~~~qi~~-------------  240 (464)
                      ++++++.+.+..++||||+++|+|.+++...                   ..+++..++.++.||++             
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~  162 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR  162 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            9999999999999999999999999998643                   23677888999999986             


Q ss_pred             -----hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCC
Q 039021          241 -----NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE--GKHLQ  308 (464)
Q Consensus       241 -----Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~--g~~p~  308 (464)
                           |||+++++.+||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++  +..||
T Consensus       163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~  242 (304)
T cd05096         163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPY  242 (304)
T ss_pred             CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCC
Confidence                 9999999999999999998654322     12235789999999988889999999999999999986  56788


Q ss_pred             CCCc-cchhcccc----cc--CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          309 TNNS-FDFMHLKS----VN--FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       309 ~~~~-~~~~~~~~----~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .... .+......    ..  ......++.+|+.+.+|+.+||+.||++|||+.+|.+.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         243 GELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            7655 22211110    00  0111122457899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-36  Score=290.06  Aligned_cols=229  Identities=17%  Similarity=0.182  Sum_probs=188.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||++.+.  ++.||+|.+.............+.+| .+++.++||||+++++++.+++.+++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            3778899999999999999984  88999999986443333344566778 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CC
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~  267 (464)
                      |+++|+|.+++...  ..+++..+..++.|+++                  ||++++++.+||+|||+++......  ..
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG  160 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence            99999999888643  46899999999999986                  9999999999999999998764322  23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch----hccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF----MHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ..|++.|+|||++.+..++.++|||||||++|||++|..||.+.....    ...........++ ..+++.+.+|+.+|
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~  239 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYS-EKFSEAARSICRQL  239 (285)
T ss_pred             ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccC-cccCHHHHHHHHHH
Confidence            458999999999998899999999999999999999999998765211    1111112222222 45789999999999


Q ss_pred             cccCCCCCC-----CHHHHHHHHH
Q 039021          344 TNKDPSKRP-----TFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rp-----t~~~i~~~l~  362 (464)
                      |+.||++||     ++.+++.|.+
T Consensus       240 l~~~P~~R~~~~~~~~~~l~~~~~  263 (285)
T cd05605         240 LTKDPGFRLGCRGEGAEEVKAHPF  263 (285)
T ss_pred             ccCCHHHhcCCCCCCHHHHhcCcC
Confidence            999999999     8889988854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.3e-36  Score=308.43  Aligned_cols=225  Identities=16%  Similarity=0.179  Sum_probs=188.2

Q ss_pred             cccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..|.+.+.||+|+||.||+|...   +..||+|.+...   .......+..| .+|+.++|||||++++++..++.+|||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv  143 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI  143 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence            34889999999999999999873   567888877542   24445667889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-  264 (464)
                      |||+++|+|.++++.    +.++++.++..++.||+.                  |||++.++.+||+|||+++..... 
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            999999999988753    457899999999999986                  999999999999999999876532 


Q ss_pred             ----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHH
Q 039021          265 ----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       265 ----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .+.......+....++ ..+++++.+|
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~l  302 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFP-CPVSSGMKAL  302 (478)
T ss_pred             ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC-ccCCHHHHHH
Confidence                223459999999999999999999999999999999999999998766 3333333333232322 4578999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      |.+||..||++||++.+++.+
T Consensus       303 i~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        303 LDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             HHHHhccChhhCcCHHHHHhC
Confidence            999999999999999999875

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=3.3e-36  Score=286.86  Aligned_cols=223  Identities=15%  Similarity=0.159  Sum_probs=182.2

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|+||+||++.++  ++.||+|.+.............+..| +++++++||||+++++++...+.+++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999984  88999999986543333444567778 999999999999999999999999999999999999


Q ss_pred             HHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCcCC
Q 039021          217 KGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQENS  271 (464)
Q Consensus       217 ~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~gt  271 (464)
                      .+++..    ...+++..+..++.||+.                  ||++++++.+||+|||+++......   ....||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            888742    356899999999999986                  9999999999999999998665332   233589


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      +.|+|||++.+..++.++|||||||++|||++|+.||......    ............++ ..+++.+.+++.+||+.|
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~  239 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYP-DKFSPASKSFCEALLAKD  239 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCc-ccCCHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999765411    11111111122222 458899999999999999


Q ss_pred             CCCCC-----CHHHHHHHHHH
Q 039021          348 PSKRP-----TFAAVIITLEE  363 (464)
Q Consensus       348 p~~Rp-----t~~~i~~~l~~  363 (464)
                      |++||     +++++++|.+.
T Consensus       240 P~~R~~~~~~~~~~~l~h~~~  260 (280)
T cd05608         240 PEKRLGFRDGNCDGLRTHPLF  260 (280)
T ss_pred             HHHhcCCCCCCHHHHhcChhh
Confidence            99999     77888888553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3e-36  Score=283.15  Aligned_cols=224  Identities=18%  Similarity=0.307  Sum_probs=185.8

Q ss_pred             ccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +|++.+.||+|+||.||++.++ +..+|+|.+......    ...+.+| .++++++||||+++++++.+.+..++||||
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~   80 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF   80 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence            5777899999999999999986 568999988754222    3467788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----C
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----N  267 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----~  267 (464)
                      +++|+|.+++.. .+.+++..++.++.|++.                  ||++++++.+||+|||+++.......    .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05114          81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG  160 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence            999999999975 357899999999999986                  99999999999999999986543221    1


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ..++..|+|||++.+..++.++||||||+++|||++ |+.||...+ .+....+..+.++.. +...+.++.+++.+||+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~c~~  239 (256)
T cd05114         161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR-PKLASMTVYEVMYSCWH  239 (256)
T ss_pred             CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHcc
Confidence            225668999999998889999999999999999999 999998776 333333333333322 24568899999999999


Q ss_pred             cCCCCCCCHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITL  361 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l  361 (464)
                      .+|++||++.++++.|
T Consensus       240 ~~p~~Rps~~~l~~~l  255 (256)
T cd05114         240 EKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCcccCcCHHHHHHhh
Confidence            9999999999998865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.7e-36  Score=296.04  Aligned_cols=229  Identities=16%  Similarity=0.185  Sum_probs=186.7

Q ss_pred             ccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCc-hHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYH-PVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~  204 (464)
                      +|++.+.||+|+||.||+++.     .++.||+|++.+.... .......+..| .+++.+ +||||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478889999999999999986     3789999999853221 22334567778 999999 599999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+++|+|.+++..++.+++.++..++.||+.                  |||++.++.+||+|||+++...... 
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            999999999999999988888999999999999986                  9999999999999999998653221 


Q ss_pred             ---CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccCCCCccCCCCcHHHH
Q 039021          266 ---PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                         ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....    ............+.++ ..+++.+.
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  239 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP-SFIGPEAQ  239 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHH
Confidence               234599999999999865 47889999999999999999999997543    1111111222233333 45899999


Q ss_pred             HHHHHHcccCCCCCC-----CHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRP-----TFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rp-----t~~~i~~~l~  362 (464)
                      +++.+||+.||++||     ++.++++|.+
T Consensus       240 ~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  269 (332)
T cd05614         240 DLLHKLLRKDPKKRLGAGPQGASEIKEHPF  269 (332)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence            999999999999999     7889998854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=7e-36  Score=282.33  Aligned_cols=232  Identities=19%  Similarity=0.274  Sum_probs=194.2

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++++  .++.||+|.+.............+.+| .+++.++||||+++++++.+++..+++||
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            578889999999999999997  488999999876444445556678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          210 YLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |+++++|.+++..    ...+++..++.++.|+++                  ||+++.++.+||+|||++.......  
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd08229          83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  162 (267)
T ss_pred             ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence            9999999998863    356899999999999986                  9999999999999999998765332  


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                       ....|+..|+|||++.+..++.++||||||+++|+|++|..||.....   ...........++.+...+++++.+++.
T Consensus       163 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08229         163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN  242 (267)
T ss_pred             cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHH
Confidence             234588999999999988899999999999999999999999976542   2222222222333343557899999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||..||++|||+.+|++.++++
T Consensus       243 ~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         243 MCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HhcCCCcccCCCHHHHHHHHhhh
Confidence            99999999999999999988765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1e-36  Score=296.08  Aligned_cols=223  Identities=17%  Similarity=0.195  Sum_probs=181.1

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|++.  ++.||+|++.+...........+..|  .+++.++||||+++++++.+.+..|+||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999984  88999999986433223333444444  568889999999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      |+|..++.....+++..+..++.||++                  |||++.++.+||+|||+++.....   .....||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence            999999988788999999999999986                  999999999999999998764321   22345899


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|||++|..||...+...........+..++ ...+.++.+++.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~  239 (321)
T cd05603         161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP-GGKTVAACDLLVGLLHKDQRRRL  239 (321)
T ss_pred             ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHHccCCHhhcC
Confidence            99999999999999999999999999999999999988763332222222233333 45788999999999999999999


Q ss_pred             CHH----HHHHHH
Q 039021          353 TFA----AVIITL  361 (464)
Q Consensus       353 t~~----~i~~~l  361 (464)
                      ++.    ++++|.
T Consensus       240 ~~~~~~~~~~~~~  252 (321)
T cd05603         240 GAKADFLEIKNHV  252 (321)
T ss_pred             CCCCCHHHHhCCC
Confidence            753    555554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2e-36  Score=294.20  Aligned_cols=227  Identities=16%  Similarity=0.178  Sum_probs=185.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|+..+.||+|+||.||+|+++  ++.||+|++.............+..| .+++.+. |++|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3667789999999999999984  88999999986433233344556677 8888775 578889999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~  267 (464)
                      ||+++|+|.+++...+.+++.+++.++.|++.                  |||+++++.+||+|||+++.....   ...
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence            99999999999988889999999999999986                  999999999999999999864322   223


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|+.||.+................++ ..+++++.+++.+||+++
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~~l~~~  239 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP-KSLSKEAVSICKGLMTKH  239 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-ccCCHHHHHHHHHHcccC
Confidence            4599999999999999999999999999999999999999988763322222222233333 557899999999999999


Q ss_pred             CCCCCCH-----HHHHHH
Q 039021          348 PSKRPTF-----AAVIIT  360 (464)
Q Consensus       348 p~~Rpt~-----~~i~~~  360 (464)
                      |.+|++.     .++++|
T Consensus       240 p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         240 PSKRLGCGPEGERDIREH  257 (323)
T ss_pred             HhhCCCCCCCCHHHHhcC
Confidence            9999974     556555

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.7e-36  Score=299.86  Aligned_cols=231  Identities=15%  Similarity=0.141  Sum_probs=189.1

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+++++  +..||+|++.............+.+| .+++.++||||+++++++.+++.+|+|
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            347899999999999999999984  88999999986433333344557788 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      |||+++|+|.+++... .+++..+..++.|++.                  |||++.++.+||+|||+++......    
T Consensus       122 ~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~  200 (370)
T cd05596         122 MEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC  200 (370)
T ss_pred             EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC
Confidence            9999999999998754 6899999999999986                  9999999999999999998764321    


Q ss_pred             CCCcCCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccc-cCCCCccC-CCCcHHHHH
Q 039021          266 PNQENSQRNDNSSIASNV----LDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSV-NFEPKFQI-SRCPNRLKQ  338 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~-~~~~~~~~-~~~~~~~~~  338 (464)
                      ....||+.|+|||++.+.    .++.++|||||||++|||++|+.||...... ....+.. .....++. ..+|.++.+
T Consensus       201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  280 (370)
T cd05596         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKD  280 (370)
T ss_pred             CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHH
Confidence            234599999999998653    4789999999999999999999999887632 2222211 11222332 347999999


Q ss_pred             HHHHHcccCCCC--CCCHHHHHHHHH
Q 039021          339 LIAQCTNKDPSK--RPTFAAVIITLE  362 (464)
Q Consensus       339 li~~cl~~dp~~--Rpt~~~i~~~l~  362 (464)
                      ||.+||..+|.+  |||+.+++.|.+
T Consensus       281 li~~~L~~~p~r~~R~s~~ell~h~~  306 (370)
T cd05596         281 LICAFLTDREVRLGRNGVDEIKSHPF  306 (370)
T ss_pred             HHHHHccChhhccCCCCHHHHhcCcc
Confidence            999999999988  999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=6.8e-37  Score=298.60  Aligned_cols=229  Identities=18%  Similarity=0.191  Sum_probs=189.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||+||+|+++  ++.||+|+++............+.+| .+++.++||||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            5888999999999999999984  88999999987544344456678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----C
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~  266 (464)
                      |+++|+|.+++.+. ..+++..+..++.|++.                  |||++.++.+||+|||+++......    .
T Consensus        82 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~  161 (330)
T cd05601          82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK  161 (330)
T ss_pred             CCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeee
Confidence            99999999999875 78999999999999986                  9999999999999999998765322    1


Q ss_pred             CCcCCCCcccccccc------cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc-cCCCCccC-CCCcHHHH
Q 039021          267 NQENSQRNDNSSIAS------NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV-NFEPKFQI-SRCPNRLK  337 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~  337 (464)
                      ...||+.|+|||++.      ...++.++|||||||++|||++|+.||..... .....+.. .....++. ..+++++.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  241 (330)
T cd05601         162 LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFL  241 (330)
T ss_pred             cccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHH
Confidence            235899999999986      45678999999999999999999999987652 22221111 11112221 35789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +|+.+||. +|.+|||+.+++.|.+
T Consensus       242 ~li~~ll~-~p~~R~t~~~l~~h~~  265 (330)
T cd05601         242 DLIQSLLC-GQKERLGYEGLCCHPF  265 (330)
T ss_pred             HHHHHHcc-ChhhCCCHHHHhCCCC
Confidence            99999997 9999999999998854

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.5e-36  Score=295.46  Aligned_cols=218  Identities=18%  Similarity=0.217  Sum_probs=177.5

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|++.  ++.||+|++.............+..|  .+++.++||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999984  77899999986432222223333334  567889999999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.||++                  |||++.++.+||+|||+++.....   .....||+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence            999999988888999999999999986                  999999999999999999764322   22345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|+|++|..||...+..............+. +.+++.+.+++.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~  239 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK-PNITNSARHLLEGLLQKDRTKRL  239 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC-CCCCHHHHHHHHHHcccCHHHCC
Confidence            99999999999999999999999999999999999987663222222222222222 46899999999999999999999


Q ss_pred             CHHH
Q 039021          353 TFAA  356 (464)
Q Consensus       353 t~~~  356 (464)
                      ++.+
T Consensus       240 ~~~~  243 (325)
T cd05602         240 GAKD  243 (325)
T ss_pred             CCCC
Confidence            8764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=4.2e-36  Score=282.19  Aligned_cols=225  Identities=22%  Similarity=0.364  Sum_probs=188.6

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee-eCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV-LGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~-~~~~~~lv~E~  210 (464)
                      +|.+.+.||+|+||.||++..+|..||+|.++..     .....+.+| .++++++|+||+++++++. +++..++||||
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           7 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             hCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            6888899999999999999999999999998753     224567888 9999999999999999765 45678999999


Q ss_pred             cCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          211 LPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       211 ~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      +++|+|.++++.++  .+++..++.++.|++.                  ||++++++.+||+|||+++..........+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  161 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  161 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence            99999999997643  4889999999999986                  999999999999999999876554444556


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      +..|+|||++.+..++.++|||||||++|+|++ |+.||..... +..........+.. ...+|+.+.+++.+||+.+|
T Consensus       162 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05082         162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPVVYDVMKQCWHLDA  240 (256)
T ss_pred             ceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHhcCCh
Confidence            778999999998889999999999999999998 9999987663 22222222223332 25689999999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEE  363 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~  363 (464)
                      ++|||+.++++.|+.
T Consensus       241 ~~Rpt~~~l~~~l~~  255 (256)
T cd05082         241 ATRPSFLQLREQLEH  255 (256)
T ss_pred             hhCcCHHHHHHHHhc
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=5.6e-36  Score=282.10  Aligned_cols=228  Identities=21%  Similarity=0.334  Sum_probs=188.8

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|.+. +..||+|.+....    ...+.+.+| .++++++||||+++++++.+.+..++||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            347888999999999999999975 6789999987532    234578889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          209 EYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||+++|+|.++++.  ...+++..++.++.|+++                  ||+++.++.+||+|||+++......   
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA  160 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence            99999999999965  356888999999999986                  9999999999999999998765322   


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                       ....++..|+|||++....++.++|||||||++|+|++ |..||..... ..........+.+. ...+|.++.+++.+
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  239 (261)
T cd05072         161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPR-MENCPDELYDIMKT  239 (261)
T ss_pred             cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHH
Confidence             12235678999999988889999999999999999998 9999987652 22222222222222 24578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||..+|++||+++++.+.|+.
T Consensus       240 ~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         240 CWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HccCCcccCcCHHHHHHHHhc
Confidence            999999999999999998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=5.3e-36  Score=284.91  Aligned_cols=230  Identities=19%  Similarity=0.273  Sum_probs=186.5

Q ss_pred             cccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ...+|++.+.||+|+||.||+|.++       +..||+|.+....  .......+.+| .+++.++||||+++++++.++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~   81 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   81 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            4557999999999999999999864       3579999986532  22344567888 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc----------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEe
Q 039021          202 EEMILITEYLPKGNLKGILSKK----------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIG  253 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~  253 (464)
                      +..++||||+++|+|.++++..          ..+++..++.++.|++.                  ||++++++.+||+
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~  161 (277)
T cd05062          82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG  161 (277)
T ss_pred             CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence            9999999999999999999652          23567788888888886                  9999999999999


Q ss_pred             cchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCC
Q 039021          254 EYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPK  326 (464)
Q Consensus       254 DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~  326 (464)
                      |||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||..... ...........+.
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~  241 (277)
T cd05062         162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLD  241 (277)
T ss_pred             CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence            999998654322     12235778999999998899999999999999999999 7899987663 2222222222222


Q ss_pred             ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          327 FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       327 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      . +..+++.+.+++.+||+.||++|||+.+++++|+
T Consensus       242 ~-~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         242 K-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             C-CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            2 3567899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=7.8e-36  Score=281.55  Aligned_cols=227  Identities=20%  Similarity=0.334  Sum_probs=188.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|.++  ++.||+|.+...    ......+.+| +++++++||||+++++++..++.+++|||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence            5777799999999999999985  789999998753    2234567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC--
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN--  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~--  267 (464)
                      |+++|+|.+++...  ..+++..++.++.|++.                  ||++++++.+||+|||+++........  
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence            99999999999653  46899999999999986                  999999999999999999876543211  


Q ss_pred             --CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          268 --QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       268 --~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                        ..++..|+|||.+.+..++.++|||||||++|||++ |..||.+...+ ..........+..+ ..+|+++.+++.+|
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~c  241 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERP-EGCPPKVYELMRAC  241 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHH
Confidence              124668999999998999999999999999999998 99999876632 22222222233333 56899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      |+.||++|||+.++++.|+.+
T Consensus       242 l~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         242 WQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             ccCCcccCCCHHHHHHHHHhh
Confidence            999999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-35  Score=280.30  Aligned_cols=230  Identities=21%  Similarity=0.330  Sum_probs=191.1

Q ss_pred             cccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+|++.+.||+|+||.||+|.++     ...||+|.++...  .......+..| .++++++||||+++++.+...+..+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence            46888999999999999999984     3479999987542  23445667888 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC
Q 039021          206 LITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      +||||+++|+|.+++.. .+.+++..++.++.|++.                  |||+++++.+||+|||+++.......
T Consensus        82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd05033          82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA  161 (266)
T ss_pred             EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence            99999999999999976 357899999999999986                  99999999999999999998752111


Q ss_pred             -----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHH
Q 039021          267 -----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       267 -----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                           ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ......+......+. +..+++.+.++
T Consensus       162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l  240 (266)
T cd05033         162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP-PMDCPSALYQL  240 (266)
T ss_pred             ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHH
Confidence                 1225678999999998899999999999999999998 999997665 333333333223232 25679999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.+||+.+|++||++.+|+++|..+
T Consensus       241 i~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         241 MLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=5e-36  Score=285.40  Aligned_cols=228  Identities=20%  Similarity=0.267  Sum_probs=188.4

Q ss_pred             cccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|.+.+.||+|+||.||+|.+.       +..||+|.++...  ..+....+.+| ++|++++||||+++++++.....
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            36888899999999999999863       4689999987642  23345678889 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhc--------------cCCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          204 MILITEYLPKGNLKGILSKK--------------VRLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~--------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      .++||||+++|+|.++++..              ..+++..+..++.|++.                  ||+++.++.+|
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k  162 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK  162 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence            99999999999999999753              34788899999999986                  99999999999


Q ss_pred             EecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCC
Q 039021          252 IGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFE  324 (464)
Q Consensus       252 l~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~  324 (464)
                      |+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.... .+.......+ .
T Consensus       163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~-~  241 (280)
T cd05049         163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG-R  241 (280)
T ss_pred             ECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C
Confidence            99999998653221     12235788999999999999999999999999999998 999997766 3333322222 2


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ....+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus       242 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         242 LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            22233568999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=8.2e-36  Score=304.71  Aligned_cols=230  Identities=15%  Similarity=0.189  Sum_probs=190.3

Q ss_pred             cccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC----
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE----  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~----  202 (464)
                      ...+|.+.+.||+|+||+||+|++  +++.||+|++...... ......+.+| .++..++|+||+++++.+...+    
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            345899999999999999999987  4899999999865443 3445567788 9999999999999998776432    


Q ss_pred             ----ceEEEEEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecch
Q 039021          203 ----EMILITEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       203 ----~~~lv~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG  256 (464)
                          .+++||||+++|+|.++++.+    ..+++..+..++.|++.                  |||++.++.+||+|||
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence                368999999999999998642    47899999999999986                  9999999999999999


Q ss_pred             hhhhhccc-----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCC
Q 039021          257 VQMFYEQI-----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQIS  330 (464)
Q Consensus       257 ~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~  330 (464)
                      +++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ........+..... +.
T Consensus       189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~-~~  267 (496)
T PTZ00283        189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL-PP  267 (496)
T ss_pred             cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC-CC
Confidence            99876432     2234599999999999999999999999999999999999999988763 33333333323333 35


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+++++.+++.+||+.||.+||++.+++.|.
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p  298 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMP  298 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence            6899999999999999999999999999874

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=4.5e-36  Score=292.22  Aligned_cols=223  Identities=15%  Similarity=0.205  Sum_probs=183.9

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|+++  ++.||+|+++............+.+| .++.++ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999984  78999999997544444556677888 888887 699999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++....   ......||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence            999999988788999999999999986                  99999999999999999975321   223445999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-------cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-------FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      .|+|||++.+..++.++|||||||++|+|++|..||....       .+.........+..++ ..+++.+.+++.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~li~~~L~  239 (327)
T cd05617         161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP-RFLSVKASHVLKGFLN  239 (327)
T ss_pred             ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999996432       1112222222233333 5578999999999999


Q ss_pred             cCCCCCCC------HHHHHHHH
Q 039021          346 KDPSKRPT------FAAVIITL  361 (464)
Q Consensus       346 ~dp~~Rpt------~~~i~~~l  361 (464)
                      .||.+|++      +.+++.|-
T Consensus       240 ~dP~~R~~~~~~~~~~~i~~h~  261 (327)
T cd05617         240 KDPKERLGCQPQTGFSDIKSHT  261 (327)
T ss_pred             cCHHHcCCCCCCCCHHHHHcCC
Confidence            99999998      45777663

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.8e-36  Score=294.89  Aligned_cols=222  Identities=17%  Similarity=0.186  Sum_probs=180.7

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||+||+|++.  |+.||+|++.............+..|  .+++.++||||+++++++..++..|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999984  88999999986433223333444445  467889999999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~~~gt~  272 (464)
                      |+|..++...+.+++..+..++.||++                  |||+++++.+||+|||+++....   ......||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence            999999988889999999999999986                  99999999999999999875432   223345999


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      .|+|||++.+..++.++|||||||++|+|++|..||...+................ +..+..+.+++.+||+.+|.+||
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~ll~~~p~~R~  239 (325)
T cd05604         161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR-PGASLTAWSILEELLEKDRQRRL  239 (325)
T ss_pred             hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC-CCCCHHHHHHHHHHhccCHHhcC
Confidence            99999999999999999999999999999999999987763222222222222222 45789999999999999999999


Q ss_pred             CHH----HHHHH
Q 039021          353 TFA----AVIIT  360 (464)
Q Consensus       353 t~~----~i~~~  360 (464)
                      ++.    +++.|
T Consensus       240 ~~~~~~~~i~~h  251 (325)
T cd05604         240 GAKEDFLEIQEH  251 (325)
T ss_pred             CCCCCHHHHhcC
Confidence            875    55554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=3.8e-36  Score=297.17  Aligned_cols=232  Identities=15%  Similarity=0.154  Sum_probs=188.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+++++  ++.||+|++.+...........+.+| .+++.++||||+++++++.+++.+|+|
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv  121 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV  121 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            347899999999999999999984  78999999976433333445567788 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      |||+++|+|.+++... .+++..+..++.||+.                  |||+++++.+||+|||+|+......    
T Consensus       122 ~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~  200 (370)
T cd05621         122 MEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC  200 (370)
T ss_pred             EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceec
Confidence            9999999999999754 6899999999999976                  9999999999999999998764322    


Q ss_pred             CCCcCCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc-cCCCCccC-CCCcHHHHH
Q 039021          266 PNQENSQRNDNSSIASNV----LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV-NFEPKFQI-SRCPNRLKQ  338 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~  338 (464)
                      ....||+.|+|||++.+.    .++.++|||||||++|||++|+.||...+. .....+.. .....++. ..++..+.+
T Consensus       201 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~  280 (370)
T cd05621         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKN  280 (370)
T ss_pred             ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHH
Confidence            244599999999998764    378899999999999999999999987762 22222221 11222332 346899999


Q ss_pred             HHHHHcccCCCC--CCCHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSK--RPTFAAVIITLEE  363 (464)
Q Consensus       339 li~~cl~~dp~~--Rpt~~~i~~~l~~  363 (464)
                      ++.+||..++.+  |+|+.++++|.+.
T Consensus       281 li~~~L~~~~~r~~R~~~~e~l~hp~~  307 (370)
T cd05621         281 LICAFLTDREVRLGRNGVEEIKQHPFF  307 (370)
T ss_pred             HHHHHccCchhccCCCCHHHHhcCccc
Confidence            999999865544  8899999998653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=4.4e-36  Score=282.11  Aligned_cols=225  Identities=18%  Similarity=0.283  Sum_probs=185.8

Q ss_pred             cccccccccccceeeeeEEeEEeC-ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+|++.+.||+|+||.||+|.+.+ ..||+|.+......    ...+.+| .++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE   79 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence            368888999999999999999864 46999998754322    2457888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----  266 (464)
                      |+++|+|.+++... ..+++..++.++.||+.                  ||+++.++.+||+|||+++.......    
T Consensus        80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05113          80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV  159 (256)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence            99999999999763 47899999999999987                  99999999999999999886543221    


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      ...++..|++||++.+..++.++|||||||++|+|++ |..||..... ..........++. .+...++++.+++.+||
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl  238 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY-RPHLASEKVYAIMYSCW  238 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHc
Confidence            2235678999999988889999999999999999998 9999987653 2323333222222 23456899999999999


Q ss_pred             ccCCCCCCCHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITL  361 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+|++||++.+|+..|
T Consensus       239 ~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         239 HEKAEERPTFQQLLSSI  255 (256)
T ss_pred             CCCcccCCCHHHHHHhh
Confidence            99999999999999876

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=8.5e-36  Score=281.83  Aligned_cols=227  Identities=18%  Similarity=0.218  Sum_probs=185.3

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|++  .++.||+|++....   ......+.+| .++++++||||+++++++...+..++||
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            3689999999999999999997  47899999997532   2233467788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++++|.+++...+.+++..+..++.|++.                  ||+++.++.+||+|||+++......   ..
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06646          86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS  165 (267)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCc
Confidence            99999999999988788999999999999986                  9999999999999999998664322   23


Q ss_pred             CcCCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc-cccCCCC-c-cCCCCcHHHHHHH
Q 039021          268 QENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK-SVNFEPK-F-QISRCPNRLKQLI  340 (464)
Q Consensus       268 ~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~-~~~~~~~-~-~~~~~~~~~~~li  340 (464)
                      ..|++.|+|||.+.   ...++.++|||||||++|||++|..||..... ...... .....+. . ....++..+.++|
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV  245 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHH
Confidence            34889999999884   35578899999999999999999999965541 111111 1111111 1 1134689999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+||..+|++|||+++|+++|
T Consensus       246 ~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         246 KISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHhhCChhhCcCHHHHhcCC
Confidence            999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.3e-36  Score=295.13  Aligned_cols=221  Identities=19%  Similarity=0.230  Sum_probs=182.7

Q ss_pred             cccccceeeeeEEeEE-----eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          138 SMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +.||+|+||.||++++     .|+.||+|++...... ......+..| ++|++++||||+++++++.+++.+|+||||+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            5799999999999976     3789999999864322 2233456678 9999999999999999999999999999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcC
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQEN  270 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~g  270 (464)
                      ++|+|.+++.+...+++..+..++.||+.                  |||++.++.+||+|||+++.....   .....|
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  160 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG  160 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence            99999999988888999999999999986                  999999999999999999875433   223459


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||..... +....+. .....++ ..+++.+.+||++||+.||+
T Consensus       161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~-~~~~~~p-~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL-KAKLGMP-QFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             ChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH-cCCCCCC-CCCCHHHHHHHHHHhhcCHh
Confidence            9999999999988899999999999999999999999987662 2222222 1222333 45789999999999999999


Q ss_pred             CCCC-----HHHHHHHH
Q 039021          350 KRPT-----FAAVIITL  361 (464)
Q Consensus       350 ~Rpt-----~~~i~~~l  361 (464)
                      +||+     +.+++.|.
T Consensus       239 ~R~~a~~~~~~~~~~~~  255 (318)
T cd05582         239 NRLGAGPDGVEEIKRHP  255 (318)
T ss_pred             HcCCCCCCCHHHHhCCC
Confidence            9999     45566553

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=4.6e-36  Score=295.38  Aligned_cols=224  Identities=17%  Similarity=0.210  Sum_probs=180.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|+..+.||+|+||.||+|++.  ++.||+|++....  .......+.+| ++++.++|+||+++++++.+.+.+++|||
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            5788899999999999999984  8899999997542  23445678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++|+|.+.    ...++..+..++.||+.                  |||+++++.+||+|||+++......   ...
T Consensus       153 ~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~  228 (353)
T PLN00034        153 FMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS  228 (353)
T ss_pred             cCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccccc
Confidence            9999998653    24567778888999976                  9999999999999999998765322   234


Q ss_pred             cCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccccCCCCccCCCCcHHHHHH
Q 039021          269 ENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       269 ~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                      .||..|+|||++..     ...+.++|||||||++|||++|+.||......    ..........+. ....++.++.+|
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l  307 (353)
T PLN00034        229 VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPE-APATASREFRHF  307 (353)
T ss_pred             ccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCC-CCCccCHHHHHH
Confidence            59999999998743     23356899999999999999999999744311    111111222222 225678999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |.+||+.||++|||+.|+++|-+.
T Consensus       308 i~~~l~~~P~~Rpt~~ell~hp~~  331 (353)
T PLN00034        308 ISCCLQREPAKRWSAMQLLQHPFI  331 (353)
T ss_pred             HHHHccCChhhCcCHHHHhcCccc
Confidence            999999999999999999998653

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-35  Score=279.01  Aligned_cols=227  Identities=22%  Similarity=0.384  Sum_probs=192.9

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      .+|++.+.||+|+||.||+|...|+.||+|.+....    .....+.+| .++++++|+||+++++++.+.+..++||||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             hhccceeeeecCCCceEEEEEecCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            468888999999999999999999999999998642    145678888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          211 LPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       211 ~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      +++++|.++++...  .+++..+..++.|++.                  ||+++.++.+||+|||+++..........+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~  161 (256)
T cd05039          82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKL  161 (256)
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCC
Confidence            99999999997654  7999999999999986                  999999999999999999887544434446


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      +..|+|||++....++.++||||||+++|+|++ |..||...... .........+...+ ..+|+++.+++.+||..+|
T Consensus       162 ~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p  240 (256)
T cd05039         162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAP-EGCPPEVYKVMKDCWELDP  240 (256)
T ss_pred             cccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCc-cCCCHHHHHHHHHHhccCh
Confidence            678999999988889999999999999999997 99999877632 22222222233322 5578999999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEE  363 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~  363 (464)
                      ++|||+.++++.|+.
T Consensus       241 ~~Rp~~~~l~~~l~~  255 (256)
T cd05039         241 AKRPTFKQLREQLAL  255 (256)
T ss_pred             hhCcCHHHHHHHHhc
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-35  Score=279.79  Aligned_cols=229  Identities=19%  Similarity=0.239  Sum_probs=190.0

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCc--hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYH--PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~--~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +|.+.+.||+|+||.||+|..  .++.||+|.+......  .......+.+| +++++++||||+++++++.+.+..++|
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   82 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF   82 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence            578889999999999999987  4889999998754322  22344567888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      |||+++++|.+++...+.+++..+..++.|++.                  ||++++++.+||+|||+++......    
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~  162 (263)
T cd06625          83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT  162 (263)
T ss_pred             EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence            999999999999988888999999999999976                  9999999999999999997654321    


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc-ccCCCCccCCCCcHHHHHHHH
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS-VNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~li~  341 (464)
                        ....|+..|+|||++.+..++.++||||||+++|+|++|+.||..... ....... ....+..+ ..++..+.+++.
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~  241 (263)
T cd06625         163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLP-SHVSPDARNFLR  241 (263)
T ss_pred             cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCC-ccCCHHHHHHHH
Confidence              123478899999999998899999999999999999999999977652 2222211 22222222 557899999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||..+|++|||+.+++.+.+
T Consensus       242 ~~l~~~p~~Rpt~~~ll~~~~  262 (263)
T cd06625         242 RTFVENAKKRPSAEELLRHFF  262 (263)
T ss_pred             HHhhcCcccCCCHHHHhhCCC
Confidence            999999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.5e-36  Score=298.07  Aligned_cols=229  Identities=18%  Similarity=0.183  Sum_probs=188.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+++++  ++.||+|++.............+..| .++.+++||||+++++.+.+.+.+|||||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            5788899999999999999984  88999999986433334456678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-------  264 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-------  264 (464)
                      |++||+|.+++.+.+.+++..+..++.|++.                  |||++.++.+||+|||+++.....       
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~  161 (360)
T cd05627          82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYR  161 (360)
T ss_pred             CCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccccc
Confidence            9999999999988889999999999999986                  999999999999999998754321       


Q ss_pred             -------------------------------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc
Q 039021          265 -------------------------------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF  313 (464)
Q Consensus       265 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~  313 (464)
                                                     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~  241 (360)
T cd05627         162 NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (360)
T ss_pred             ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH
Confidence                                           0123599999999999999999999999999999999999999987763


Q ss_pred             chhcccccc--CCCCccC-CCCcHHHHHHHHHHcccCCCCCCC---HHHHHHHHH
Q 039021          314 DFMHLKSVN--FEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPT---FAAVIITLE  362 (464)
Q Consensus       314 ~~~~~~~~~--~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt---~~~i~~~l~  362 (464)
                      .........  ....++. ..+++++.+||.+++ .||.+|++   +.++++|.+
T Consensus       242 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~  295 (360)
T cd05627         242 QETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPF  295 (360)
T ss_pred             HHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCC
Confidence            222211111  1122222 237899999999987 49999984   788888854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.6e-35  Score=278.42  Aligned_cols=223  Identities=17%  Similarity=0.252  Sum_probs=184.7

Q ss_pred             ccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          139 MVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      .||+|+||.||+|.++    +..||+|+++... ......+.+.+| .+++.++||||+++++++. .+..++||||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~   79 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL   79 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence            6899999999999763    6789999987543 233456678888 9999999999999999875 4567899999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------CCCc
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------PNQE  269 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------~~~~  269 (464)
                      |+|.+++.....+++..+..++.|++.                  ||++++++.+||+|||+++......      ....
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05116          80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK  159 (257)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence            999999988778999999999999986                  9999999999999999998765322      1122


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ++..|+|||++....++.++|||||||++|||++ |..||.... ......+..+..+..+ ..+++++.++|.+||+.|
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         160 WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP-QRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             CCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHhccC
Confidence            4678999999988889999999999999999998 999998765 3333333333333333 568999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEEV  364 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~~  364 (464)
                      |++||++.+|...|+..
T Consensus       239 p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         239 VDERPGFAVVELRLRNY  255 (257)
T ss_pred             chhCcCHHHHHHHHhcc
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=6.5e-36  Score=284.35  Aligned_cols=221  Identities=14%  Similarity=0.170  Sum_probs=177.5

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|+||.||+++++  |+.||+|.+.............+..| +++++++||||+++++++.++..+++||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999974  89999999975433222233445568 999999999999999999999999999999999999


Q ss_pred             HHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCCcCCCCc
Q 039021          217 KGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQENSQRN  274 (464)
Q Consensus       217 ~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~~gt~~y  274 (464)
                      .+++...  ..+++..+..++.|++.                  ||++++++.+||+|||++.......  ....|+..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY  160 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence            9888653  35889999999999986                  9999999999999999998765332  234589999


Q ss_pred             ccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          275 DNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       275 ~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      +|||++.+..++.++|||||||++|||++|+.||.....    ..................+++++.+|+.+||+.||++
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~  240 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPED  240 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhh
Confidence            999999988899999999999999999999999976431    1111111111222233457999999999999999999


Q ss_pred             CCCHHHHHHH
Q 039021          351 RPTFAAVIIT  360 (464)
Q Consensus       351 Rpt~~~i~~~  360 (464)
                      ||+++|++++
T Consensus       241 R~~~~~~~~~  250 (277)
T cd05607         241 RLGSREKNDD  250 (277)
T ss_pred             CCCCccchhh
Confidence            9999665543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.3e-35  Score=283.11  Aligned_cols=228  Identities=22%  Similarity=0.305  Sum_probs=186.9

Q ss_pred             ccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      +|++.+.||+|+||.||+|.+      .+..|++|.+....  .......+.+| +++++++||||+++++++..+...+
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            577889999999999999985      25689999997532  23445678889 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhc-----------------cCCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          206 LITEYLPKGNLKGILSKK-----------------VRLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      +||||+++|+|.+++..+                 ..+++.+++.++.|+++                  |||+++++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~  163 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHV  163 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcE
Confidence            999999999999998532                 24788889999999986                  9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccC
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~  323 (464)
                      ||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+... ..........
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  243 (283)
T cd05090         164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ  243 (283)
T ss_pred             EeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999998764321     22336778999999988889999999999999999998 9999977653 2333332222


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      .+.. +..+++++.+++.+||+.||++||++.+|+++|..
T Consensus       244 ~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         244 LLPC-SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             cCCC-CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            2222 25689999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.6e-35  Score=283.24  Aligned_cols=232  Identities=20%  Similarity=0.266  Sum_probs=191.0

Q ss_pred             ccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..+|.+.+.||+|+||+||++.+.       +..+|+|.+...   .......+.+| .++++++||||+++++++...+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   80 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            346889999999999999999851       356899988753   23445678889 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhcc-------------CCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          203 EMILITEYLPKGNLKGILSKKV-------------RLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~-------------~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      .+++||||+++|+|.+++...+             .+++..++.++.|++.                  |||+++++.+|
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence            9999999999999999997543             4899999999999986                  99999999999


Q ss_pred             EecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCC
Q 039021          252 IGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFE  324 (464)
Q Consensus       252 l~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~  324 (464)
                      |+|||+++......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||..... ........+..
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~  240 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  240 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence            99999998654322     12235778999999998999999999999999999998 9999977652 22222222222


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ... +..+++++.+|+.+||+.||.+|||+.++...|+.+..
T Consensus       241 ~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         241 LQR-PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             CCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            222 24578999999999999999999999999999988854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.2e-35  Score=284.52  Aligned_cols=229  Identities=21%  Similarity=0.221  Sum_probs=195.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++.+.  ++.||+|++........+....+.+| +++++++||||+++++++.+++.+++|||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            5888899999999999999984  78999999986543334456678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      |+++++|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++..........|+
T Consensus        82 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  161 (290)
T cd05580          82 YVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGT  161 (290)
T ss_pred             cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCC
Confidence            9999999999988889999999999999986                  9999999999999999998877665556699


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      +.|+|||.+.+..++.++||||||+++|+|++|+.||..................++ ..+++.+.+++.+||..||.+|
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~R  240 (290)
T cd05580         162 PEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP-SFFSPDAKDLIRNLLQVDLTKR  240 (290)
T ss_pred             ccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC-ccCCHHHHHHHHHHccCCHHHc
Confidence            999999999888889999999999999999999999987663222222222233333 4578999999999999999999


Q ss_pred             C-----CHHHHHHHHH
Q 039021          352 P-----TFAAVIITLE  362 (464)
Q Consensus       352 p-----t~~~i~~~l~  362 (464)
                      |     +++++++|.+
T Consensus       241 ~~~~~~~~~~l~~~~~  256 (290)
T cd05580         241 LGNLKNGVNDIKNHPW  256 (290)
T ss_pred             cCcccCCHHHHHcCcc
Confidence            9     8888888754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=7.9e-36  Score=281.02  Aligned_cols=231  Identities=21%  Similarity=0.366  Sum_probs=193.0

Q ss_pred             ccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ....+|++.+.||.|+||.||+|.+. +..+++|++....   ......+..| .+++.++||||+++++++.+.+..++
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI   79 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence            34457999999999999999999985 7889999988642   2234567888 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          207 ITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ||||+++|+|.+++..  ...+++..++.++.|++.                  ||++++++.+||+|||++....... 
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence            9999999999999975  356899999999999976                  9999999999999999998765322 


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                        ....++..|++||++.+..++.++||||||+++|+|++ |+.||.... .+.........++..+ ..+++.+.+++.
T Consensus       160 ~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~  238 (261)
T cd05148         160 LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCP-AKCPQEIYKIML  238 (261)
T ss_pred             cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCC-CCCCHHHHHHHH
Confidence              12236678999999988899999999999999999998 899998766 2333333333333333 568999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +||+.||++|||++++++.|+.
T Consensus       239 ~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         239 ECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHcCCCchhCcCHHHHHHHHhc
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-36  Score=287.14  Aligned_cols=228  Identities=18%  Similarity=0.193  Sum_probs=193.9

Q ss_pred             cccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |.+.+.||+|.|+.|.+|++  .|..||||++.+..+..... ..+.+| +.|+.++|||||++|.+......+|||+|+
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st-~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLST-GHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhh-hHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            78889999999999999997  69999999999876654433 345556 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhc-ccCCCceeEecchhhhhhcc--cCCCC
Q 039021          211 LPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLL-QDEGDHLKIGEYWVQMFYEQ--IHPNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nil-l~~~~~~kl~DFG~a~~~~~--~~~~~  268 (464)
                      -++|+|++||-++ ..+.+..+.+|+.||+.                  |+. +..-|.+||.|||++..+..  ...+.
T Consensus        99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts  178 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS  178 (864)
T ss_pred             cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence            9999999999664 57999999999999986                  654 45668999999999987764  44678


Q ss_pred             cCCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLDD-TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ||+..|.|||++.+..|+ +++||||||||||-|++|+.||...+.....-++...+...| ..++.++++||.+||..|
T Consensus       179 CGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP-shvS~eCrdLI~sMLvRd  257 (864)
T KOG4717|consen  179 CGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP-SHVSKECRDLIQSMLVRD  257 (864)
T ss_pred             cchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc-hhhhHHHHHHHHHHHhcC
Confidence            899999999999999998 579999999999999999999998873333233333444444 668999999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEE  363 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~  363 (464)
                      |.+|.+.++|..+-|-
T Consensus       258 PkkRAslEeI~s~~Wl  273 (864)
T KOG4717|consen  258 PKKRASLEEIVSTSWL  273 (864)
T ss_pred             chhhccHHHHhccccc
Confidence            9999999999887553

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.8e-35  Score=294.30  Aligned_cols=235  Identities=18%  Similarity=0.242  Sum_probs=188.6

Q ss_pred             ccccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeee
Q 039021          125 VNFDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFL  195 (464)
Q Consensus       125 ~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~  195 (464)
                      |++.  ..+|.+++.||+|+||.||+|+++       +..||+|+++....  ....+.+.+| .+|.++. |||||+++
T Consensus        32 ~~~~--~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~  107 (401)
T cd05107          32 WEMP--RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLL  107 (401)
T ss_pred             ceec--HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence            4444  346788899999999999999974       35799999986422  2334567888 9999997 99999999


Q ss_pred             ceeeeCCceEEEEEecCCCChHHHHhhcc---------------------------------------------------
Q 039021          196 GSIVLGEEMILITEYLPKGNLKGILSKKV---------------------------------------------------  224 (464)
Q Consensus       196 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---------------------------------------------------  224 (464)
                      +++...+..++||||+++|+|.++++..+                                                   
T Consensus       108 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (401)
T cd05107         108 GACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA  187 (401)
T ss_pred             EEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence            99999999999999999999999996421                                                   


Q ss_pred             -----------------------------------------------CCCHHHHHHHHHHHHh-----------------
Q 039021          225 -----------------------------------------------RLDLPTALRYALDIAR-----------------  240 (464)
Q Consensus       225 -----------------------------------------------~l~~~~~~~~~~qi~~-----------------  240 (464)
                                                                     .+++..++.++.|+++                 
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp  267 (401)
T cd05107         188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAA  267 (401)
T ss_pred             CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCc
Confidence                                                           3566778888889886                 


Q ss_pred             -hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-
Q 039021          241 -NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-  312 (464)
Q Consensus       241 -Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-  312 (464)
                       |||+++++.+||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.... 
T Consensus       268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~  347 (401)
T cd05107         268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM  347 (401)
T ss_pred             ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence             9999999999999999998654221     12346788999999998889999999999999999998 899997654 


Q ss_pred             cchh-ccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          313 FDFM-HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       313 ~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+.. .....+.++..+ ..++.++.+|+.+||..+|.+||++++|+..|+.+
T Consensus       348 ~~~~~~~~~~~~~~~~p-~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         348 NEQFYNAIKRGYRMAKP-AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             hHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            2221 222222233322 45789999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=6.4e-36  Score=286.05  Aligned_cols=226  Identities=17%  Similarity=0.222  Sum_probs=181.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|+++  ++.||+|+++....  ......+.+| +++++++||||+++++++.+.+..++|||
T Consensus         6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            5888999999999999999984  88999999975421  2223456678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+++ +|.+++... ..+++..+..++.||+.                  |||++.++.+||+|||+++......   ..
T Consensus        84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~  162 (288)
T cd07871          84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN  162 (288)
T ss_pred             CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence            9985 999988754 45789999999999986                  9999999999999999997654322   23


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--c-------------------CC
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--N-------------------FE  324 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~-------------------~~  324 (464)
                      ..+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+... +.......  +                   ..
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLF  242 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcccc
Confidence            448999999999865 5689999999999999999999999987651 11111000  0                   00


Q ss_pred             CCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          325 PKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       325 ~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+       ....+++++.+||.+||+.||.+|||++|+++|.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp  286 (288)
T cd07871         243 PQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS  286 (288)
T ss_pred             CccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence            000       0134678999999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=3.5e-35  Score=277.38  Aligned_cols=232  Identities=19%  Similarity=0.286  Sum_probs=194.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.+.  |+.||+|.++............+.+| +++++++|+||+++++++.+.+..++|||
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   82 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE   82 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence            6888899999999999999984  88999999975444444556778889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          210 YLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |+++|+|.+++..    ...+++..+..++.|+++                  ||+++.++.+||+|||+++......  
T Consensus        83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~  162 (267)
T cd08224          83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  162 (267)
T ss_pred             cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence            9999999999853    356899999999999986                  9999999999999999988665322  


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                       ....+++.|+|||++.+..++.++|||||||++|+|++|+.||.....   ........+..++.+...++..+.++|.
T Consensus       163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  242 (267)
T cd08224         163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVS  242 (267)
T ss_pred             cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHH
Confidence             233488999999999988899999999999999999999999976542   2222222222333333467889999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||..+|++|||+.+|++.|+.+
T Consensus       243 ~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         243 RCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHcCCCcccCCCHHHHHHHHHHh
Confidence            99999999999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-35  Score=279.83  Aligned_cols=228  Identities=21%  Similarity=0.329  Sum_probs=188.4

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|.++ ++.||+|.++....    ..+.+.+| .++++++||||+++++++...+..++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            346888899999999999999974 67899999876422    23457788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-C
Q 039021          209 EYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-N  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-~  267 (464)
                      ||+++++|.+++...  ..+++..+..++.|++.                  ||++++++.+||+|||+++....... .
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence            999999999999764  37899999999999986                  99999999999999999987653221 1


Q ss_pred             Cc---CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          268 QE---NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       268 ~~---gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      ..   .+..|+|||++.+..++.++||||||+++|||++ |+.||.+... .....+........ +..+++.+.+++.+
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  239 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPC-PPGCPKELYDIMLD  239 (261)
T ss_pred             cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCcCCHHHHHHHHH
Confidence            12   3457999999998899999999999999999999 9999987663 23333222222222 25578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||+.+|++||++.+++..|+.
T Consensus       240 ~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         240 CWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HhhcCcccCCCHHHHHHHHhc
Confidence            999999999999999998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.1e-35  Score=285.26  Aligned_cols=230  Identities=16%  Similarity=0.185  Sum_probs=189.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++.+.  +..+|+|.+....  .......+.+| +++++++||||+++++++.+++.+++|||
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            5888899999999999999984  7789999987532  23345567889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CCCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~~~  269 (464)
                      |+++++|.++++..+.+++..+..++.|+++                   |||++.++.+||+|||++...... .....
T Consensus        80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (308)
T cd06615          80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  159 (308)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence            9999999999988888999999999999975                   999999999999999998765432 23445


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccc------------------------------
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLK------------------------------  319 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~------------------------------  319 (464)
                      |+..|+|||++.+..++.++|||||||++|+|++|+.||...+.......                              
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (308)
T cd06615         160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI  239 (308)
T ss_pred             CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence            89999999999888899999999999999999999999865431111000                              


Q ss_pred             -------cccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          320 -------SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       320 -------~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                             .....+..+...++.++.+|+.+||..+|++|||+.+++++.+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence                   001112222233678999999999999999999999999997754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.7e-35  Score=284.33  Aligned_cols=233  Identities=22%  Similarity=0.337  Sum_probs=190.3

Q ss_pred             cccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~  200 (464)
                      .+|.+++.||+|+||.||++++.         ...+|+|.+....  .......+.+| .+++++ +||||+++++++..
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            47899999999999999999863         2469999998642  23334567778 999999 79999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhcccC
Q 039021          201 GEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLLQDE  246 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nill~~  246 (464)
                      .+..++||||+++|+|.+++..+                ..+++.+++.++.|++.                  |||++.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  175 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  175 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence            99999999999999999999753                24788999999999986                  999999


Q ss_pred             CCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchh-ccc
Q 039021          247 GDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFM-HLK  319 (464)
Q Consensus       247 ~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~-~~~  319 (464)
                      ++.+||+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.....+.. ...
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~  255 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL  255 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence            9999999999998664321     11224578999999998889999999999999999998 8899987663322 222


Q ss_pred             cccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      ........ +..++.++.+|+.+||..+|++|||+.++++.|+.+...
T Consensus       256 ~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         256 KEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             HcCCCCCC-CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            22222232 255789999999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-35  Score=283.08  Aligned_cols=232  Identities=18%  Similarity=0.228  Sum_probs=192.8

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||+||++.+.  +..||+|++....  .......+.+| ++++.++||||+++++++...+.+++|
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence            457899999999999999999985  8899999987542  23345678889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPN  267 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~  267 (464)
                      |||+++|+|.+++.+.+.+++..+..++.|++.                   ||++++++.++|+|||++...... ...
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~  161 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT  161 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence            999999999999988788999999999888865                   999999999999999998765432 233


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc------------chhccccccCCCCccCCCCcHH
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF------------DFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ..|+..|+|||++.+..++.++|||||||++|+|++|..||.....            ...........+.++...++.+
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPED  241 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHH
Confidence            4589999999999888999999999999999999999999976442            1111222222333333347889


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.+|+.+||+.||++|||+.+++++.+.+
T Consensus       242 ~~~li~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         242 LRDFVDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            99999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.7e-35  Score=286.97  Aligned_cols=232  Identities=16%  Similarity=0.274  Sum_probs=189.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      +.+|++.+.||+|+||.||+|++.  +.    .||+|+++..  ......+.+.+| .+++.++||||+++++++... .
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~   82 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   82 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence            457899999999999999999873  33    4899998753  223445678888 999999999999999998764 5


Q ss_pred             eEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 MILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .++|+||+++|+|.++++.. ..+++..++.++.||+.                  |||+++++.+||+|||+++.....
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~  162 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD  162 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence            78999999999999999764 56899999999999986                  999999999999999999876532


Q ss_pred             CC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHH
Q 039021          265 HP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       265 ~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ..     ...++..|+|||++.+..++.++|||||||++|||++ |..||.+... +...........+.+ ..++..+.
T Consensus       163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  241 (316)
T cd05108         163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP-PICTIDVY  241 (316)
T ss_pred             CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCC-CCCCHHHH
Confidence            21     1224678999999999999999999999999999998 9999987663 222222222233322 55789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +++.+||..+|++||++.+++.++..+..
T Consensus       242 ~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         242 MIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            99999999999999999999999887743

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=7.7e-36  Score=295.25  Aligned_cols=233  Identities=15%  Similarity=0.155  Sum_probs=187.5

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||+|+++  ++.||+|++.............+.+| .+++.++||||+++++++.+++.+++
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3457999999999999999999985  78999999975433333445567788 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||||+++|+|.+++... .+++..+..++.||+.                  |||++.++.+||+|||+++......   
T Consensus       121 v~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~  199 (371)
T cd05622         121 VMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR  199 (371)
T ss_pred             EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc
Confidence            99999999999998764 6899999999999976                  9999999999999999998765321   


Q ss_pred             -CCCcCCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccc-cCCCCccC-CCCcHHHH
Q 039021          266 -PNQENSQRNDNSSIASNV----LDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSV-NFEPKFQI-SRCPNRLK  337 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~-~~~~~~~~-~~~~~~~~  337 (464)
                       ....||+.|+|||++.+.    .++.++|||||||++|||++|..||...+.. ....+.. .....++. ..+++++.
T Consensus       200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  279 (371)
T cd05622         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK  279 (371)
T ss_pred             ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHH
Confidence             244599999999998754    3789999999999999999999999887632 2222211 11222222 45899999


Q ss_pred             HHHHHHcccCCCC--CCCHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSK--RPTFAAVIITLEE  363 (464)
Q Consensus       338 ~li~~cl~~dp~~--Rpt~~~i~~~l~~  363 (464)
                      ++|.+||..++.+  ||++.++++|.+.
T Consensus       280 ~li~~~L~~~~~r~~r~~~~ei~~h~~~  307 (371)
T cd05622         280 NLICAFLTDREVRLGRNGVEEIKRHLFF  307 (371)
T ss_pred             HHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence            9999999854443  7899999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.5e-36  Score=291.92  Aligned_cols=231  Identities=20%  Similarity=0.251  Sum_probs=199.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|.+.+.||+|.|++|.+|++.  +..||+|.+.+........ +.+.+| ++|..|+|||||+++.+......+|+||
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~-~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKR-QKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHH-HHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            35889999999999999999984  9999999999876655443 347778 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc--cCCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ--IHPNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~--~~~~~  268 (464)
                      ||+.+|.+++++.+++++.+.++..++.|+.+                  ||||+.+.++||+|||++.++..  ...+.
T Consensus       135 eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~  214 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTF  214 (596)
T ss_pred             EeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccccccc
Confidence            99999999999999999999999999999976                  99999999999999999999874  34677


Q ss_pred             cCCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLDD-TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      +|++.|.|||++.+..|+ +++|+||+|+++|-|++|..||.+.+...........+...+ -.++.++.++|+++|..+
T Consensus       215 cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp-~~ms~dce~lLrk~lvl~  293 (596)
T KOG0586|consen  215 CGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIP-FYMSCDCEDLLRKFLVLN  293 (596)
T ss_pred             CCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccc-ceeechhHHHHHHhhccC
Confidence            899999999999998885 789999999999999999999999873333222221222222 336889999999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEEV  364 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~~  364 (464)
                      |.+|++.+++.++-|.-
T Consensus       294 Pskr~~~dqim~~~W~n  310 (596)
T KOG0586|consen  294 PSKRGPCDQIMKDRWRN  310 (596)
T ss_pred             ccccCCHHHhhhhcccc
Confidence            99999999999987644

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-36  Score=294.59  Aligned_cols=223  Identities=16%  Similarity=0.140  Sum_probs=180.5

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc---CCCceeeeeceeeeCCceEEEEEecCC
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL---RHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l---~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      ||+|+||+||+|+++  ++.||+|++.............+..| .++..+   +||||+++++++.+.+.+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999984  88999999976433223333444455 666655   799999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCC
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQ  272 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~  272 (464)
                      |+|.+++...+.+++..+..++.||++                  |||++.++.+||+|||+++.....   .....||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence            999999988889999999999999986                  999999999999999998764321   22345999


Q ss_pred             CcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          273 RNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       273 ~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      .|+|||++.+. .++.++|||||||++|+|++|..||..................++...+++++.+|+++||+.||.+|
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHC
Confidence            99999998764 58999999999999999999999998876333222222223334444578999999999999999999


Q ss_pred             C----CHHHHHHHHH
Q 039021          352 P----TFAAVIITLE  362 (464)
Q Consensus       352 p----t~~~i~~~l~  362 (464)
                      |    ++.++++|.+
T Consensus       241 ~~~~~~~~~ll~h~~  255 (330)
T cd05586         241 LGAHRDAVELKEHPF  255 (330)
T ss_pred             CCCCCCHHHHhcCcc
Confidence            8    6788887754

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.9e-35  Score=276.98  Aligned_cols=227  Identities=16%  Similarity=0.261  Sum_probs=187.7

Q ss_pred             ccccccccccceeeeeEEeEE-eCceEEEEEeeccCC---chHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIY---HPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +|++.+.||+|+||+||+|.. .++.+|+|.+.....   ........+.+| +++++++|+||+++++++.+.+..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            467789999999999999987 488899999875422   123344568889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----  264 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----  264 (464)
                      |||+++++|.+++.+.+.+++..+..++.|++.                  ||++++++.+||+|||++......     
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  160 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT  160 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence            999999999999988788999999999999976                  999999999999999999875321     


Q ss_pred             ----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--cCCCCccCCCCcHHHH
Q 039021          265 ----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--NFEPKFQISRCPNRLK  337 (464)
Q Consensus       265 ----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~  337 (464)
                          .....|+..|+|||++.+..++.++|||||||++|+|++|..||...+. ........  ...+.. +..+++++.
T Consensus       161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  239 (265)
T cd06631         161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRL-PDSFSAAAI  239 (265)
T ss_pred             ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCC-CCCCCHHHH
Confidence                1123488999999999998899999999999999999999999987552 21111111  112222 255889999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      +++.+||..+|++||++.+++.|
T Consensus       240 ~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         240 DFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcC
Confidence            99999999999999999999876

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.4e-35  Score=290.31  Aligned_cols=229  Identities=18%  Similarity=0.222  Sum_probs=181.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~~  204 (464)
                      +|++.+.||+|+||.||+|+++  +..||+|.+...... ......+.+| .++++++||||+++++++...     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence            4788899999999999999984  889999998753221 2233467788 999999999999999988643     248


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      |+|||||. ++|.+++.....+++..+..++.||++                  |||++.++.+||+|||+++...... 
T Consensus        80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence            99999996 699999988888999999999999986                  9999999999999999998653221 


Q ss_pred             -----CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcc-------------------
Q 039021          266 -----PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHL-------------------  318 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~-------------------  318 (464)
                           ....||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+... .....                   
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE  238 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence                 22358999999999876  6789999999999999999999999976541 10000                   


Q ss_pred             --------ccccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          319 --------KSVNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       319 --------~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                              ........+  ..+.+++.+.+++.+||+.||++|||++++++|-+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f  293 (338)
T cd07859         239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF  293 (338)
T ss_pred             hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence                    000000000  013467889999999999999999999999998654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.8e-35  Score=288.95  Aligned_cols=232  Identities=19%  Similarity=0.279  Sum_probs=186.1

Q ss_pred             cccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee-C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL-G  201 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~-~  201 (464)
                      .+|++.+.||+|+||.||+|.+.       ++.||+|+++....  ......+..| .+++++ +||||++++++|.. +
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            37889999999999999999752       46899999975421  2334566778 999999 89999999998865 4


Q ss_pred             CceEEEEEecCCCChHHHHhhc----------------------------------------------------------
Q 039021          202 EEMILITEYLPKGNLKGILSKK----------------------------------------------------------  223 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~----------------------------------------------------------  223 (464)
                      ..++++|||+++|+|.+++...                                                          
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            6789999999999999998542                                                          


Q ss_pred             ---cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccc
Q 039021          224 ---VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNS  277 (464)
Q Consensus       224 ---~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aP  277 (464)
                         .++++..+..++.||+.                  |||+++++.+||+|||+++.+....     ....++..|+||
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence               26788999999999986                  9999999999999999998764221     122367789999


Q ss_pred             cccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-c-hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCH
Q 039021          278 SIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-D-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTF  354 (464)
Q Consensus       278 E~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~  354 (464)
                      |++.+..++.++|||||||++|||++ |..||.+... + ..........+. .+..+++++.+++.+||+.+|++||++
T Consensus       245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~RPs~  323 (337)
T cd05054         245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR-APEYATPEIYSIMLDCWHNNPEDRPTF  323 (337)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC-CCccCCHHHHHHHHHHccCChhhCcCH
Confidence            99999999999999999999999998 9999976541 2 112222222222 224578999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 039021          355 AAVIITLEEVSA  366 (464)
Q Consensus       355 ~~i~~~l~~~~~  366 (464)
                      .+|+++|+.+..
T Consensus       324 ~ell~~l~~~~~  335 (337)
T cd05054         324 SELVEILGDLLQ  335 (337)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=2.4e-35  Score=276.76  Aligned_cols=226  Identities=20%  Similarity=0.255  Sum_probs=189.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|.+.  +..|++|.+...... ......+.+| +++++++||||+++++++.+.+..++|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence            4677889999999999999984  889999998754333 3345677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |+++++|.+++...  ..+++..+..++.|++.                  ||+++.++.+||+|||+++......   .
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~  159 (256)
T cd08529          80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN  159 (256)
T ss_pred             eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence            99999999999763  67899999999999976                  9999999999999999988765332   2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ...........+..+ ..+++++.+++.+||+
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~  238 (256)
T cd08529         160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS-QMYSQQLAQLIDQCLT  238 (256)
T ss_pred             ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc-cccCHHHHHHHHHHcc
Confidence            33588999999999999999999999999999999999999987662 222222223333332 3578999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      .+|++||++.+++++
T Consensus       239 ~~p~~Rp~~~~ll~~  253 (256)
T cd08529         239 KDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCcccCcCHHHHhhC
Confidence            999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=277.74  Aligned_cols=225  Identities=20%  Similarity=0.312  Sum_probs=185.0

Q ss_pred             cccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+|++.+.||+|+||.||++.++ +..+|+|.+......    ...+.+| .++++++||||+++++++...+..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE   79 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence            35788899999999999999986 558999998754322    2356678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-CC-
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-NQ-  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-~~-  268 (464)
                      |+++++|.+++.. .+.+++..++.++.|++.                  ||++++++.+||+|||+++....... .. 
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence            9999999999975 357899999999999976                  99999999999999999986643221 11 


Q ss_pred             --cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          269 --ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       269 --~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                        .++..|+|||++.+..++.++||||||+++|+|++ |+.||.... .+..........+..+ ..+|+++.+++.+||
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl  238 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRP-KLAPTEVYTIMYSCW  238 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHh
Confidence              23457999999999999999999999999999999 899997765 3333333333233333 457999999999999


Q ss_pred             ccCCCCCCCHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITL  361 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l  361 (464)
                      ..+|++|||+.++++.|
T Consensus       239 ~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         239 HEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             cCChhhCcCHHHHHHHh
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=2.9e-35  Score=282.09  Aligned_cols=233  Identities=20%  Similarity=0.342  Sum_probs=190.7

Q ss_pred             ccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIV  199 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~  199 (464)
                      +...+|++.+.||+|+||.||++.+.       ...+|+|.+.....  ......+.+| .+++++ +||||+++++++.
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            33446888899999999999999874       25789999886422  3344567888 999999 8999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhh----------------ccCCCHHHHHHHHHHHHh------------------hhccc
Q 039021          200 LGEEMILITEYLPKGNLKGILSK----------------KVRLDLPTALRYALDIAR------------------NLLQD  245 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~----------------~~~l~~~~~~~~~~qi~~------------------Nill~  245 (464)
                      .++.+++||||+++|+|.++++.                ...+++..++.++.|++.                  |||++
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence            99999999999999999999954                246889999999999986                  99999


Q ss_pred             CCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhcc
Q 039021          246 EGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHL  318 (464)
Q Consensus       246 ~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~  318 (464)
                      +++.+||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++ |..||..... +....
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  246 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  246 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            99999999999998765322     11225678999999988999999999999999999998 9999987763 22222


Q ss_pred             ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ......+..+ ..++.++.+|+.+||..||++|||+.++++.|+.+
T Consensus       247 ~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         247 LKEGYRMEKP-QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHcCCcCCCC-CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            2232223322 45789999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.8e-35  Score=275.86  Aligned_cols=222  Identities=20%  Similarity=0.310  Sum_probs=182.0

Q ss_pred             cccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCC
Q 039021          138 SMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKG  214 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g  214 (464)
                      +.||+|+||.||+|++  .++.||+|.+....  ..+....+.+| +++++++||||+++++++...+..++||||++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            4699999999999998  48899999887532  24445678889 9999999999999999999999999999999999


Q ss_pred             ChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCC-----cC
Q 039021          215 NLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQ-----EN  270 (464)
Q Consensus       215 ~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~-----~g  270 (464)
                      +|.+++... ..+++.+++.++.|++.                  ||+++.++.+||+|||++..........     .+
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  158 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI  158 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence            999999764 46899999999999986                  9999999999999999988654321111     13


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      +..|+|||.+.+..++.++|||||||++|||++ |..||..... ..........+...+ ..++..+.+|+.+||+.+|
T Consensus       159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p  237 (252)
T cd05084         159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCP-ELCPDAVYRLMERCWEYDP  237 (252)
T ss_pred             ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCc-ccCCHHHHHHHHHHcCCCh
Confidence            457999999998889999999999999999998 8999976552 222222222233332 5578999999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLE  362 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~  362 (464)
                      ++|||+.++++.|+
T Consensus       238 ~~Rps~~~~~~~l~  251 (252)
T cd05084         238 GQRPSFSTVHQELQ  251 (252)
T ss_pred             hhCcCHHHHHHHHh
Confidence            99999999998774

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=4.9e-35  Score=283.50  Aligned_cols=239  Identities=21%  Similarity=0.332  Sum_probs=192.9

Q ss_pred             cccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeec
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLG  196 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~  196 (464)
                      .....+|.+.+.||+|+||.||++++.         ...||+|.++....  ......+..| ++++++ +||||+++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLLG   85 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence            333457889999999999999999852         45789999875422  3445667888 999999 6999999999


Q ss_pred             eeeeCCceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hh
Q 039021          197 SIVLGEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NL  242 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Ni  242 (464)
                      ++...+.+++||||+++|+|.+++...                ..+++.++..++.|++.                  ||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  165 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV  165 (314)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence            999999999999999999999999653                34788899999999986                  99


Q ss_pred             cccCCCceeEecchhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-ch
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DF  315 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~  315 (464)
                      |+++++.+||+|||+++.......     ...++..|+|||++.+..++.++|||||||++|+|++ |..||..... +.
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~  245 (314)
T cd05099         166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL  245 (314)
T ss_pred             EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            999999999999999987653211     1224568999999998899999999999999999999 8999987663 22


Q ss_pred             hccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          316 MHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      ............ +..++.++.+++.+||..+|++|||+.++++.|+.+.....
T Consensus       246 ~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~  298 (314)
T cd05099         246 FKLLREGHRMDK-PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS  298 (314)
T ss_pred             HHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence            322222222232 35678999999999999999999999999999998865443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.5e-35  Score=283.00  Aligned_cols=231  Identities=22%  Similarity=0.323  Sum_probs=185.0

Q ss_pred             ccccccccccceeeeeEEeEEe--Cc--eEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GT--WVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|.+.+.||+|+||.||+|.++  +.  .+++|.++..  ........+.+| .++.++ +||||+++++++.+++.+++
T Consensus         8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            6788899999999999999974  44  4577776542  223445678888 999999 89999999999999999999


Q ss_pred             EEEecCCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh------------------hhcccCCCceeE
Q 039021          207 ITEYLPKGNLKGILSKKV----------------RLDLPTALRYALDIAR------------------NLLQDEGDHLKI  252 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl  252 (464)
                      ||||+++|+|.++++..+                .+++..++.++.|+++                  |||+++++.+||
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl  165 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  165 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEe
Confidence            999999999999997532                5788999999999986                  999999999999


Q ss_pred             ecchhhhhhcccCCC--CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccch-hccccccCCCCcc
Q 039021          253 GEYWVQMFYEQIHPN--QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDF-MHLKSVNFEPKFQ  328 (464)
Q Consensus       253 ~DFG~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~-~~~~~~~~~~~~~  328 (464)
                      +|||+++........  ..++..|+|||++.+..++.++|||||||++|||++ |..||....... ............+
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~  245 (303)
T cd05088         166 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP  245 (303)
T ss_pred             CccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCC
Confidence            999998754322111  224678999999988889999999999999999998 999998765222 2222122122222


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                       ..+++++.+|+.+||+.+|++||++.+++..|+.+..
T Consensus       246 -~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~  282 (303)
T cd05088         246 -LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  282 (303)
T ss_pred             -CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence             4478999999999999999999999999999987743

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.8e-35  Score=279.93  Aligned_cols=228  Identities=18%  Similarity=0.247  Sum_probs=186.0

Q ss_pred             cccccccccccceeeeeEEeEEeC-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRG-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|.+.+.||+|+||.||+|.+.+       ..||+|.+.....  ......+..| .++++++||||+++++++.+.+.
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            468889999999999999999853       5789998875322  3334567888 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhcc-------CCCHHHHHHHHHHHHh------------------hhcccCCC---ceeEecc
Q 039021          204 MILITEYLPKGNLKGILSKKV-------RLDLPTALRYALDIAR------------------NLLQDEGD---HLKIGEY  255 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~-------~l~~~~~~~~~~qi~~------------------Nill~~~~---~~kl~DF  255 (464)
                      .++||||+++|+|.+++...+       .+++..++.++.||++                  ||+++.++   .+||+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence            999999999999999997642       5899999999999986                  99998764   5999999


Q ss_pred             hhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCcc
Q 039021          256 WVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQ  328 (464)
Q Consensus       256 G~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~  328 (464)
                      |+++.......     ....+..|+|||++.+..++.++|||||||++|||++ |..||.... ...........+... 
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-  242 (277)
T cd05036         164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDP-  242 (277)
T ss_pred             ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC-
Confidence            99987642211     1124568999999998899999999999999999997 999998766 333333333333333 


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +..+|..+.+++.+||+.+|++|||+.+|+++|.
T Consensus       243 ~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         243 PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            3568899999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=2.5e-35  Score=276.71  Aligned_cols=225  Identities=19%  Similarity=0.267  Sum_probs=187.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++++.  +..||+|.++....  ....+.+.+| .++++++||||+++++.+.+.+.+++|||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME   78 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            4778899999999999999984  88999999875322  3345677788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          210 YLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |+++|+|.+++..  ...+++..++.++.|+++                  ||++++++.++|+|||+++......   .
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  158 (255)
T cd08219          79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC  158 (255)
T ss_pred             eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence            9999999998864  346899999999999986                  9999999999999999997665322   2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...|++.|+|||++.+..++.++|+||||+++|+|++|..||...+. ........+.....+ ..++..+.+|+.+||+
T Consensus       159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~  237 (255)
T cd08219         159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLP-SHYSYELRSLIKQMFK  237 (255)
T ss_pred             cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCC-cccCHHHHHHHHHHHh
Confidence            33489999999999988899999999999999999999999987662 222222223233332 5578999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      .||++|||+.+|+..
T Consensus       238 ~~P~~Rp~~~~il~~  252 (255)
T cd08219         238 RNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCCCHHHHhhc
Confidence            999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=4.1e-35  Score=280.91  Aligned_cols=230  Identities=20%  Similarity=0.279  Sum_probs=189.5

Q ss_pred             ccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      +|.+.+.||+|+||.||+|++.       +..+++|.+....   ......+.+| +++++++||||+++++++...+..
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL   82 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence            5778899999999999999863       3468888887532   3334568888 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          205 ILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      ++||||+++++|.+++..+                +.+++..++.++.||+.                  |||++.++.+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~  162 (291)
T cd05094          83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV  162 (291)
T ss_pred             EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence            9999999999999999653                34889999999999986                  9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccC
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~  323 (464)
                      ||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.... .+.......+.
T Consensus       163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  242 (291)
T cd05094         163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR  242 (291)
T ss_pred             EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCC
Confidence            999999997654321     22336789999999999999999999999999999998 999997765 23322222222


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+. .+..+|..+.+++.+||+.+|++|||+.++++.|..+..
T Consensus       243 ~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         243 VLE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             CCC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            222 235578999999999999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-35  Score=278.91  Aligned_cols=229  Identities=20%  Similarity=0.306  Sum_probs=188.4

Q ss_pred             ccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..+|++.+.||+|+||.||+|.++       +..||+|.+....  .......+.+| .+++.++||||+++++++....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   82 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ   82 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence            447888999999999999999975       2679999987542  23344567788 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc----------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEec
Q 039021          203 EMILITEYLPKGNLKGILSKK----------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGE  254 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~D  254 (464)
                      ..++||||+++|+|.+++...          ..+++..++.++.|++.                  |||++.++.+||+|
T Consensus        83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d  162 (277)
T cd05032          83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD  162 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence            999999999999999999642          24678899999999976                  99999999999999


Q ss_pred             chhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCc
Q 039021          255 YWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKF  327 (464)
Q Consensus       255 FG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~  327 (464)
                      ||+++......     ....++..|+|||.+.+..++.++|||||||++|||++ |..||.... .+..........+..
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05032         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL  242 (277)
T ss_pred             cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCC
Confidence            99998765332     12336789999999988889999999999999999998 999998766 333333333333333


Q ss_pred             cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      + ..++.++.+++.+||+.+|++|||+.+++..|+
T Consensus       243 ~-~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         243 P-ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             C-CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            3 557999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.1e-35  Score=274.98  Aligned_cols=223  Identities=17%  Similarity=0.252  Sum_probs=184.1

Q ss_pred             cccccceeeeeEEeEEe--C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          138 SMVEQGVFGESQTAKWR--G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +.||+|+||.||+|.+.  +   ..||+|.+......  .....+.+| .++++++||||+++++++. .+..++||||+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence            47999999999999873  2   67999999865332  345678888 9999999999999999875 55689999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC------
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN------  267 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~------  267 (464)
                      ++|+|.+++.....+++..+..++.|++.                  |||++.++.+||+|||+++........      
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence            99999999988778999999999999986                  999999999999999999876533221      


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ..++..|+|||++.+..++.++|||||||++|+|++ |..||.... .+....+....+.. .+..+++.+.+++.+||.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~  236 (257)
T cd05060         158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLP-RPEECPQEIYSIMLSCWK  236 (257)
T ss_pred             ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHhc
Confidence            113568999999998899999999999999999998 999998766 33333332322222 235688999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+|++||++.++++.|+.+
T Consensus       237 ~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         237 YRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CChhhCcCHHHHHHHHHhc
Confidence            9999999999999998765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-35  Score=287.81  Aligned_cols=230  Identities=16%  Similarity=0.149  Sum_probs=184.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++++.  ++.||+|++.+...........+.+| .+++.++||||+++++++.+++.+|+|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            6888999999999999999984  88999999985332333445567888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----  266 (464)
                      |+++|+|.+++.+ ...+++..+..++.||+.                  |||++.++.+||+|||++........    
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (331)
T cd05597          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN  161 (331)
T ss_pred             cCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcccc
Confidence            9999999999976 467999999999999986                  99999999999999999876543221    


Q ss_pred             CCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc-cCCCCcc--CCCCcHHHH
Q 039021          267 NQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV-NFEPKFQ--ISRCPNRLK  337 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~-~~~~~~~--~~~~~~~~~  337 (464)
                      ...||+.|+|||++..     ..++.++|||||||++|+|++|+.||..... +....+.. .....++  ...+++++.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  241 (331)
T cd05597         162 VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAK  241 (331)
T ss_pred             ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHH
Confidence            2349999999999863     4578899999999999999999999987652 22111111 1111111  134799999


Q ss_pred             HHHHHHcccCCCC--CCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSK--RPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~--Rpt~~~i~~~l~  362 (464)
                      ++|++||..++++  ||++.+++.|.+
T Consensus       242 ~li~~ll~~~~~r~~r~~~~~~l~hp~  268 (331)
T cd05597         242 DLIRRLICSPETRLGRNGLQDFKDHPF  268 (331)
T ss_pred             HHHHHHccCcccccCCCCHHHHhcCCC
Confidence            9999988654443  789999999954

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3.1e-35  Score=280.89  Aligned_cols=229  Identities=15%  Similarity=0.157  Sum_probs=187.5

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |+..+.||+|+||.||++.+.  ++.||+|.+.............+.+| .++++++|+||+++++.+.+.+.+++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            567789999999999999985  78999999986543333444556778 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCC
Q 039021          211 LPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~  268 (464)
                      +++|+|.+++...  ..+++..+..++.|++.                  ||++++++.+||+|||++.......  ...
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR  161 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence            9999999988543  46899999999999986                  9999999999999999987654322  234


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      .|+..|+|||++.+..++.++|||||||++|+|++|+.||......    ............+ +..+++++.+|+.+||
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l  240 (285)
T cd05630         162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEY-SEKFSPDARSLCKMLL  240 (285)
T ss_pred             CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhc-CccCCHHHHHHHHHHh
Confidence            5899999999999999999999999999999999999999865311    1111111111222 2557899999999999


Q ss_pred             ccCCCCCCC-----HHHHHHHHHH
Q 039021          345 NKDPSKRPT-----FAAVIITLEE  363 (464)
Q Consensus       345 ~~dp~~Rpt-----~~~i~~~l~~  363 (464)
                      +.||++|||     +.+++.|.+.
T Consensus       241 ~~~p~~R~s~~~~~~~~~~~h~~~  264 (285)
T cd05630         241 CKDPKERLGCQGGGAREVKEHPLF  264 (285)
T ss_pred             hcCHHHccCCCCCchHHHHcChhh
Confidence            999999999     8999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=6.3e-35  Score=277.87  Aligned_cols=229  Identities=19%  Similarity=0.277  Sum_probs=184.0

Q ss_pred             ccccccccccceeeeeEEeEEe--Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      +|++.+.||+|+||+||+|.+.  ++    .|++|.+...  ........+..| ..+++++||||+++++++. +...+
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~   84 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ   84 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence            6788899999999999999983  44    4677777532  122334566677 7889999999999999875 45678


Q ss_pred             EEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          206 LITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      +++||+++|+|.+++.. .+.+++..++.++.||+.                  |||+++++.+||+|||+++...... 
T Consensus        85 ~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T cd05111          85 LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK  164 (279)
T ss_pred             EEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence            99999999999999975 467899999999999986                  9999999999999999998654221 


Q ss_pred             ----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchh-ccccccCCCCccCCCCcHHHHHH
Q 039021          266 ----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFM-HLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       266 ----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                          ....++..|++||++.+..++.++|||||||++|||++ |..||.+...... .....+..+. .+..++..+.++
T Consensus       165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  243 (279)
T cd05111         165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLA-QPQICTIDVYMV  243 (279)
T ss_pred             ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC-CCCCCCHHHHHH
Confidence                12337788999999998899999999999999999998 9999987663322 2222222222 234578899999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +.+||..||++|||+.++++.|..+.
T Consensus       244 i~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         244 MVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             HHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            99999999999999999999888764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=3.4e-35  Score=280.21  Aligned_cols=227  Identities=19%  Similarity=0.222  Sum_probs=187.1

Q ss_pred             ccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      +|++.+.||+|+||.||+|.+.       +..||+|+++...  .....+.+.+| .++++++||||+++++++.+.+..
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            5788899999999999999873       4689999998542  23345668888 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          205 ILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      ++++||+.+++|.+++...                ..+++..+..++.|++.                  |||+++++.+
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~  163 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNV  163 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCce
Confidence            9999999999999998532                35788889999999986                  9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccC
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~  323 (464)
                      ||+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.+... +....+....
T Consensus       164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~  243 (283)
T cd05091         164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ  243 (283)
T ss_pred             EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999988654322     12236789999999988889999999999999999998 8889987663 3333333322


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .... +..++.++.+|+.+||+.+|++||++++|+..|+
T Consensus       244 ~~~~-~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         244 VLPC-PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             cCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            2222 3668999999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-35  Score=286.04  Aligned_cols=229  Identities=18%  Similarity=0.168  Sum_probs=180.6

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|+++  ++.||+|++.....  ......+.+| .+++.++||||+++++++.+....++||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF   82 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence            46889999999999999999984  88999999975421  2223356678 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CC
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HP  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~  266 (464)
                      ||+. ++|.+++.. .+.+++..+..++.|++.                  |||+++++.+||+|||+++.....   ..
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  161 (303)
T cd07869          83 EYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS  161 (303)
T ss_pred             ECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence            9996 588888765 367899999999999986                  999999999999999999765422   12


Q ss_pred             CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhcccc--ccC-----------CCC----
Q 039021          267 NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLKS--VNF-----------EPK----  326 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~~--~~~-----------~~~----  326 (464)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+...  .......  .+.           .+.    
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            3458999999999865 5688999999999999999999999986531  1110000  000           000    


Q ss_pred             -------------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          327 -------------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       327 -------------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                   +.....++.+.+|+.+||+.||++|||+.++++|-+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f  291 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF  291 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence                         0111245788999999999999999999999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-36  Score=259.73  Aligned_cols=237  Identities=19%  Similarity=0.202  Sum_probs=192.1

Q ss_pred             ccccccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          125 VNFDISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       125 ~~i~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ..+-+.+.+|++.+.||+|||+.||+++.  ++..+|+|.+....   .+..+...+| +..++++||||++++++...+
T Consensus        14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~   90 (302)
T KOG2345|consen   14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLRE   90 (302)
T ss_pred             CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHh
Confidence            34666778999999999999999999995  68899999998753   4566778888 999999999999999988754


Q ss_pred             C-----ceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh--------------------hhcccCCCceeE
Q 039021          202 E-----EMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR--------------------NLLQDEGDHLKI  252 (464)
Q Consensus       202 ~-----~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~--------------------Nill~~~~~~kl  252 (464)
                      .     ..||++.|...|+|.+.++.    ...+++.+.+.|+.++++                    |||+.+++.++|
T Consensus        91 ~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl  170 (302)
T KOG2345|consen   91 EKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVL  170 (302)
T ss_pred             hccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEE
Confidence            3     48999999999999999964    247999999999999987                    999999999999


Q ss_pred             ecchhhhhhcccC------------CCCcCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc--cch
Q 039021          253 GEYWVQMFYEQIH------------PNQENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDF  315 (464)
Q Consensus       253 ~DFG~a~~~~~~~------------~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~  315 (464)
                      .|||.++...-..            ....-|..|+|||.+.-   ...+.++|||||||+||+|+.|..||...-  -..
T Consensus       171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS  250 (302)
T KOG2345|consen  171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS  250 (302)
T ss_pred             EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe
Confidence            9999987644111            11227999999999864   445789999999999999999999997543  111


Q ss_pred             hccccccCCCCccC-CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          316 MHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       316 ~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.....+....+|. ..+|+.+.++|++||+.||.+||++.+++.+++.+
T Consensus       251 laLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  251 LALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             EEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            22222222223332 44899999999999999999999999999998765

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-36  Score=295.52  Aligned_cols=226  Identities=16%  Similarity=0.190  Sum_probs=192.7

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +.+++.||.|+||+||+|..+  +-..|.|++..   ...+..+.+.-| +||..++||+||++++.|...+.++|..||
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            567899999999999999986  44568888875   346677888888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCCCC
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHPNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~~~  268 (464)
                      |.||....++-. ...|++.++..+++|++.                  |||++-+|.++|+|||.+-...   ....++
T Consensus       111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF  190 (1187)
T KOG0579|consen  111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF  190 (1187)
T ss_pred             cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence            999999888754 568999999999999976                  9999999999999999986554   233466


Q ss_pred             cCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCc-cCCCCcHHHHHHHH
Q 039021          269 ENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKF-QISRCPNRLKQLIA  341 (464)
Q Consensus       269 ~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  341 (464)
                      .|||+|||||+..     ..+|+.++|||||||+|.||..+.+|-...+ ...+..+....+|.+ ++..++..+.+|++
T Consensus       191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk  270 (1187)
T KOG0579|consen  191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLK  270 (1187)
T ss_pred             cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHH
Confidence            7999999999864     5789999999999999999999999998877 444444445555554 44678999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||.+||..||+++++++|.+
T Consensus       271 ~cL~Knp~~Rp~aaqll~Hpf  291 (1187)
T KOG0579|consen  271 RCLVKNPRNRPPAAQLLKHPF  291 (1187)
T ss_pred             HHHhcCCccCCCHHHHhhCcc
Confidence            999999999999999999853

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=4.6e-35  Score=276.82  Aligned_cols=226  Identities=17%  Similarity=0.233  Sum_probs=184.9

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|++  .++.||+|+++...   ......+.+| .+++.++||||+++++++...+.+++||
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            3688899999999999999998  38899999987642   2334457778 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++++|.+++...+.+++.+++.++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06645          86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS  165 (267)
T ss_pred             eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence            99999999999988889999999999999986                  9999999999999999987654322   23


Q ss_pred             CcCCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc-cccCCC-Ccc-CCCCcHHHHHHH
Q 039021          268 QENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK-SVNFEP-KFQ-ISRCPNRLKQLI  340 (464)
Q Consensus       268 ~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~-~~~~~~-~~~-~~~~~~~~~~li  340 (464)
                      ..|+..|+|||++.   ...++.++|||||||++|+|++|..||..... ...... .....+ ... ...++..+.+++
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV  245 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHH
Confidence            35899999999874   45688999999999999999999999865441 111111 111111 111 134788999999


Q ss_pred             HHHcccCCCCCCCHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .+||+.+|++|||+++|++|
T Consensus       246 ~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         246 KMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHccCCchhCcCHHHHhcC
Confidence            99999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=7.3e-35  Score=273.99  Aligned_cols=222  Identities=16%  Similarity=0.229  Sum_probs=182.3

Q ss_pred             ccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          139 MVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      .||+|+||.||+|.++    +..||+|++....  .....+.+.+| .++++++||||+++++++. .+..++||||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            4899999999999874    4569999987642  23445678889 9999999999999999875 4578999999999


Q ss_pred             CChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC------CC
Q 039021          214 GNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP------NQ  268 (464)
Q Consensus       214 g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~------~~  268 (464)
                      |+|.+++.. ...+++..++.++.|++.                  |||++.++.+||+|||+++.......      ..
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            999999975 467999999999999987                  99999999999999999986543211      11


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      .++..|+|||++....++.++|||||||++|+|++ |..||.... .+.......+.++..+ ..+++++.+++.+||..
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~c~~~  237 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP-AECPPEMYALMKDCWIY  237 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHcCC
Confidence            24578999999988889999999999999999996 999998766 3333333333333333 56799999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|++||++.+|.+.|+.+
T Consensus       238 ~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         238 KWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             ChhhCcCHHHHHHHHhhh
Confidence            999999999999988754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=7.4e-35  Score=278.96  Aligned_cols=230  Identities=21%  Similarity=0.350  Sum_probs=188.1

Q ss_pred             ccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      +|++.+.||+|+||.||+|.+.       ...+++|.+.....  ......+.+| .+++.++||||+++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence            3677899999999999999873       24689998875432  3345678889 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhc------------------------cCCCHHHHHHHHHHHHh------------------hh
Q 039021          205 ILITEYLPKGNLKGILSKK------------------------VRLDLPTALRYALDIAR------------------NL  242 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~------------------------~~l~~~~~~~~~~qi~~------------------Ni  242 (464)
                      ++||||+.+|+|.+++...                        ..+++..++.++.|++.                  ||
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni  158 (290)
T cd05045          79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV  158 (290)
T ss_pred             EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence            9999999999999998642                        34788899999999986                  99


Q ss_pred             cccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccch-
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDF-  315 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~-  315 (464)
                      |+++++.+||+|||+++......     ....++..|+|||++.+..++.++||||||+++|||++ |..||.+...+. 
T Consensus       159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  238 (290)
T cd05045         159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL  238 (290)
T ss_pred             EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            99999999999999998653221     12236778999999988889999999999999999998 999998766332 


Q ss_pred             hccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          316 MHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ............ +..++.++.+++.+||+.+|++||++.++++.|+.+.
T Consensus       239 ~~~~~~~~~~~~-~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         239 FNLLKTGYRMER-PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             HHHHhCCCCCCC-CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            222222222222 3567899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=5.4e-35  Score=281.85  Aligned_cols=236  Identities=20%  Similarity=0.331  Sum_probs=192.0

Q ss_pred             cccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeec
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLG  196 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~  196 (464)
                      .+...+|.+.+.||+|+||.||+|++.         +..||+|.+....  .......+.+| .+++.+ +||||+++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            344567899999999999999999852         3479999987532  23345678888 999999 8999999999


Q ss_pred             eeeeCCceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hh
Q 039021          197 SIVLGEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NL  242 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Ni  242 (464)
                      ++...+..++||||+++|+|.+++...                ..+++..++.++.||++                  ||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            999999999999999999999999753                24678888999999986                  99


Q ss_pred             cccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccch-
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDF-  315 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~-  315 (464)
                      |++.++.+||+|||+++......     ....+++.|+|||++.+..++.++||||||+++|+|++ |..||....... 
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  248 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  248 (304)
T ss_pred             EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence            99999999999999998765322     12235678999999988889999999999999999998 889998766332 


Q ss_pred             hccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          316 MHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ........... .+..++.++.+|+.+||+.+|++|||+.++++.|..+..
T Consensus       249 ~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         249 FKLLKEGHRMD-KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHcCCcCC-CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            22222222222 235688999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-35  Score=276.72  Aligned_cols=228  Identities=20%  Similarity=0.245  Sum_probs=191.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||.|+||.||+|++.  ++.||+|.+....  .......+.+| ++++.++||||+++++++.++..+++|+|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            5788899999999999999984  8899999997642  13334567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++++|.+++... ++++..+..++.|++.                  ||++++++.++|+|||+++......   ...
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (274)
T cd06609          80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF  158 (274)
T ss_pred             eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccc
Confidence            99999999999865 8999999999999986                  9999999999999999998876432   234


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .+++.|+|||++.+..++.++|||||||++|+|++|..||...+ ............+......+++++.+++.+||..+
T Consensus       159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  238 (274)
T cd06609         159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKD  238 (274)
T ss_pred             cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCC
Confidence            58889999999998889999999999999999999999997655 22222222333333332337899999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEE  363 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~  363 (464)
                      |++|||+++++.|-+.
T Consensus       239 p~~Rpt~~~il~~~~~  254 (274)
T cd06609         239 PKERPSAKELLKHKFI  254 (274)
T ss_pred             hhhCcCHHHHhhChhh
Confidence            9999999999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=8.9e-35  Score=274.78  Aligned_cols=226  Identities=21%  Similarity=0.324  Sum_probs=188.1

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCch------HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP------VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~------~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      |.+.+.||+|+||.||+|.+.  ++.||+|.+.......      .+....+.+| .++++++||||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            567789999999999999973  7899999887543221      2234567888 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+++++|.+++...+.+++..+..++.|++.                  ||++++++.+||+|||+++...... 
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSL  161 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccc
Confidence            999999999999999988888999999999999986                  9999999999999999998765211 


Q ss_pred             --------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHH
Q 039021          266 --------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       266 --------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                              ....|+..|+|||.+.+..++.++|||||||++|+|++|+.||.... ............+..+ ..++..+
T Consensus       162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  240 (267)
T cd06628         162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIP-SNISSEA  240 (267)
T ss_pred             cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCC-cccCHHH
Confidence                    12348899999999998889999999999999999999999998765 2222222222233333 5578999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .++|++||+.||.+||++.+++++
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         241 IDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHHHHHHccCCchhCcCHHHHhhC
Confidence            999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.1e-34  Score=279.33  Aligned_cols=234  Identities=21%  Similarity=0.323  Sum_probs=189.8

Q ss_pred             cccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeecee
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSI  198 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~  198 (464)
                      .....+|.+.+.||+|+||.||++.+.       +..||+|.++...  .....+.+.+| .+++++ +||||+++++++
T Consensus        31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  108 (302)
T cd05055          31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC  108 (302)
T ss_pred             cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            344457899999999999999999852       4579999987542  23445678889 999999 799999999999


Q ss_pred             eeCCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          199 VLGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       199 ~~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ...+..++||||+++|+|.++++..  ..+++.++..++.|++.                  |||++.++.+||+|||++
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence            9999999999999999999999753  23899999999999986                  999999999999999999


Q ss_pred             hhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hh-ccccccCCCCccCC
Q 039021          259 MFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FM-HLKSVNFEPKFQIS  330 (464)
Q Consensus       259 ~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~-~~~~~~~~~~~~~~  330 (464)
                      +......     ....++..|+|||++.+..++.++|||||||++|||++ |..||...... .. ........+. .+.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~  267 (302)
T cd05055         189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA-QPE  267 (302)
T ss_pred             ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC-CCC
Confidence            8765322     12236778999999999999999999999999999998 99999876521 11 1211222222 224


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ..++++.+++.+||..+|++|||+.++++.|.+.
T Consensus       268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            5789999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4e-36  Score=265.06  Aligned_cols=233  Identities=18%  Similarity=0.202  Sum_probs=194.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCC-----chHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIY-----HPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~-----~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~  203 (464)
                      .|.-.+.||+|..+.|.++.++  |..+|+|++.....     ......+.-+.| .+|+++ .||||+++.++++.+..
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF   97 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF   97 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence            4666789999999999999874  88999999864321     134455566778 999998 79999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +++|+|.|+.|.|+++|...-.+++.+.+++++|+..                  |||+|++.++||+|||+|..+....
T Consensus        98 ~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge  177 (411)
T KOG0599|consen   98 VFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE  177 (411)
T ss_pred             hhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch
Confidence            9999999999999999999889999999999999976                  9999999999999999999887543


Q ss_pred             --CCCcCCCCccccccccc------CCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccC---CCCcH
Q 039021          266 --PNQENSQRNDNSSIASN------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI---SRCPN  334 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~  334 (464)
                        ...||||+|+|||.+..      ..|+..+|+||.||+||-|+.|..||.....-.+...+......+..   .+++.
T Consensus       178 kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~  257 (411)
T KOG0599|consen  178 KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISA  257 (411)
T ss_pred             hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccc
Confidence              46689999999998863      35778899999999999999999999887633333222222222221   55789


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ..++||.+||+.||.+|.|++|.+.|.+.+.
T Consensus       258 ~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  258 TVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             cHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            9999999999999999999999999977653

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.7e-35  Score=287.32  Aligned_cols=230  Identities=16%  Similarity=0.129  Sum_probs=185.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+++++  ++.||+|++.+...........+.+| .+++.++|+||+++++++.+.+..|+|||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            6888999999999999999984  78899999986432333445567888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----C
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~  266 (464)
                      |++||+|.+++.. ...+++..+..++.|++.                  |||++.++.+||+|||+++......    .
T Consensus        82 y~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  161 (331)
T cd05624          82 YYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS  161 (331)
T ss_pred             CCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeec
Confidence            9999999999976 468999999999999976                  9999999999999999998765322    1


Q ss_pred             CCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc-ccCCCCccC--CCCcHHHH
Q 039021          267 NQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS-VNFEPKFQI--SRCPNRLK  337 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~-~~~~~~~~~--~~~~~~~~  337 (464)
                      ...||+.|+|||++.+     ..++.++|||||||++|+|++|+.||...+. +....+. ...+..++.  ..+++++.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~  241 (331)
T cd05624         162 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAK  241 (331)
T ss_pred             cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHH
Confidence            2359999999999875     4678899999999999999999999987662 2222111 111222221  44789999


Q ss_pred             HHHHHHcccCCCC--CCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSK--RPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~--Rpt~~~i~~~l~  362 (464)
                      +++.+||..++.+  |+++.++++|.+
T Consensus       242 ~li~~ll~~~~~~~~~~~~~~~~~h~~  268 (331)
T cd05624         242 DLIQRLICSRERRLGQNGIEDFKKHAF  268 (331)
T ss_pred             HHHHHHccCchhhcCCCCHHHHhcCCC
Confidence            9999999876654  468999988854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=6e-35  Score=278.14  Aligned_cols=227  Identities=21%  Similarity=0.281  Sum_probs=186.3

Q ss_pred             cccccccccccceeeeeEEeEE-------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW-------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|.+.++||+|+||.||++..       ++..+|+|.+...   .......+.+| ++++.++||||+++++++.+.+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP   81 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence            3677889999999999999975       2557899988753   23445678889 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhcc---------------CCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          204 MILITEYLPKGNLKGILSKKV---------------RLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~---------------~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      .++||||+++|+|.+++...+               .+++..++.++.|++.                  |||+++++.+
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence            999999999999999997642               4789999999999975                  9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccC
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~  323 (464)
                      ||+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.... .+.........
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR  241 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence            999999987553221     12235788999999999999999999999999999998 999997665 23332232222


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ... .+..+|+.+.+|+.+||+.||++||++.+|+..|+
T Consensus       242 ~~~-~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         242 ELE-RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             cCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            222 23568999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=8e-35  Score=279.72  Aligned_cols=233  Identities=22%  Similarity=0.308  Sum_probs=187.5

Q ss_pred             ccccccccccceeeeeEEeEEe--C--ceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--G--TWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|++.+.||+|+||.||+|.++  +  ..+++|.++..  ......+.+.+| .+++++ +||||+++++++...+.+++
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            6788899999999999999874  3  34788887742  223345667888 999999 79999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeE
Q 039021          207 ITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKI  252 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl  252 (464)
                      ||||+++|+|.+++...                ..+++..++.++.|++.                  |||+++++.+||
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  160 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI  160 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence            99999999999999653                24788999999999986                  999999999999


Q ss_pred             ecchhhhhhcccCCCC--cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hhccccccCCCCcc
Q 039021          253 GEYWVQMFYEQIHPNQ--ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FMHLKSVNFEPKFQ  328 (464)
Q Consensus       253 ~DFG~a~~~~~~~~~~--~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~~~~~~~~~~~~~  328 (464)
                      +|||++..........  ..+..|+|||++.+..++.++|||||||++|||++ |..||...... ..........+.. 
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~-  239 (297)
T cd05089         161 ADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEK-  239 (297)
T ss_pred             CCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC-
Confidence            9999987543222222  23567999999998889999999999999999997 99999877632 2222222222222 


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      +..++.++.+|+.+||+.+|.+|||+.++++.|..+....
T Consensus       240 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         240 PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            2458899999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=4e-35  Score=286.22  Aligned_cols=230  Identities=15%  Similarity=0.140  Sum_probs=184.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+++++  ++.||+|++.+...........+.+| .++..++|+||+++++++.+.+.+++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            6888899999999999999985  77899999975332233344557788 89999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----C
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~  266 (464)
                      |+++|+|.+++.+ ...+++..+..++.|++.                  |||++.++.+||+|||+++......    .
T Consensus        82 y~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~  161 (332)
T cd05623          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS  161 (332)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceec
Confidence            9999999999976 467999999999999976                  9999999999999999997654221    2


Q ss_pred             CCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc-cCCCCcc--CCCCcHHHH
Q 039021          267 NQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV-NFEPKFQ--ISRCPNRLK  337 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~-~~~~~~~--~~~~~~~~~  337 (464)
                      ...||+.|+|||++.     ...++.++|||||||++|||++|+.||...+. +....+.. .....++  ...+++++.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~  241 (332)
T cd05623         162 VAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAK  241 (332)
T ss_pred             ccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHH
Confidence            245999999999986     34678999999999999999999999987762 22222211 1111222  245799999


Q ss_pred             HHHHHHcccCCCC--CCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSK--RPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~--Rpt~~~i~~~l~  362 (464)
                      +|+++||..++++  |+++.++++|.+
T Consensus       242 ~li~~ll~~~~~r~~r~~~~~~~~h~~  268 (332)
T cd05623         242 DLIRRLICSREHRLGQNGIEDFKQHPF  268 (332)
T ss_pred             HHHHHHccChhhhcCCCCHHHHhCCCC
Confidence            9999999765544  689999999853

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=9.2e-36  Score=269.87  Aligned_cols=229  Identities=20%  Similarity=0.186  Sum_probs=184.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~~lv  207 (464)
                      +|+..+.|++|.||.||+|+++  ++.||+|.++-+.-...--. ...+| .+|.+++|||||.+-.+...  -+.+|||
T Consensus        77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            6899999999999999999985  88999999986532211112 23456 99999999999999988764  3579999


Q ss_pred             EEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---C
Q 039021          208 TEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---H  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~  265 (464)
                      ||||++ ||..++..- +++...++.-++.|+++                  |+|+.+.|.+||+|||+|+.++..   .
T Consensus       156 Me~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~  234 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPY  234 (419)
T ss_pred             HHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccC
Confidence            999998 999999764 59999999999999987                  999999999999999999999866   3


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc--ccC------------------
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS--VNF------------------  323 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~--~~~------------------  323 (464)
                      +...-|..|+|||++.+ ..|+...|+||+|||+.||+++++.|.+.. .+.+..+.  .+.                  
T Consensus       235 T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~  314 (419)
T KOG0663|consen  235 TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKM  314 (419)
T ss_pred             cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcc
Confidence            44458999999999988 679999999999999999999999998765 22111110  000                  


Q ss_pred             ----------CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 ----------EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 ----------~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                +..|+...+++...+|+..+|..||.+|.|+.+.++|=+.
T Consensus       315 ~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F  364 (419)
T KOG0663|consen  315 TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYF  364 (419)
T ss_pred             ccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccc
Confidence                      0111112256888999999999999999999999988543

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=7.8e-35  Score=284.53  Aligned_cols=237  Identities=20%  Similarity=0.340  Sum_probs=191.7

Q ss_pred             cccccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeee
Q 039021          126 NFDISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQF  194 (464)
Q Consensus       126 ~i~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~  194 (464)
                      ++.....+|++++.||+|+||.||+|++.         +..||+|.++...  .......+.+| ++++++ +||||+++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~   83 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINL   83 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence            34444557899999999999999999863         2368999887532  23445678888 999999 89999999


Q ss_pred             eceeeeCCceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------
Q 039021          195 LGSIVLGEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------  240 (464)
Q Consensus       195 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------  240 (464)
                      ++++...+..+++|||+++|+|.+++...                ..+++..++.++.|++.                  
T Consensus        84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~  163 (334)
T cd05100          84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR  163 (334)
T ss_pred             eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence            99999999999999999999999999653                24778888999999986                  


Q ss_pred             hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc
Q 039021          241 NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD  314 (464)
Q Consensus       241 Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~  314 (464)
                      |||++.++.+||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.....+
T Consensus       164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~  243 (334)
T cd05100         164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE  243 (334)
T ss_pred             eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            9999999999999999998765322     11224568999999999999999999999999999998 88999877633


Q ss_pred             -hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          315 -FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       315 -~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                       ..........+.. +..++.++.+++.+||+.+|++|||+.+++.+|+.+.
T Consensus       244 ~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         244 ELFKLLKEGHRMDK-PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence             2222222222222 2557899999999999999999999999999998885

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=7.5e-35  Score=278.20  Aligned_cols=228  Identities=16%  Similarity=0.177  Sum_probs=186.6

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |+..+.||+|+||+||+|.+.  ++.||+|.+.............+.+| ++|++++|+||+.+++++..++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            566789999999999999984  88999999986543333444556778 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCC
Q 039021          211 LPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~  268 (464)
                      +++|+|.+++...  ..+++..+..++.|++.                  ||++++++.+||+|||++.......  ...
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR  161 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence            9999999888643  46999999999999986                  9999999999999999987654322  234


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      .|+..|+|||++.+..++.++|||||||++|+|++|..||......    ............++ ..+++++.+|+.+||
T Consensus       162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l  240 (285)
T cd05632         162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYS-AKFSEEAKSICKMLL  240 (285)
T ss_pred             CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccC-ccCCHHHHHHHHHHc
Confidence            5899999999999899999999999999999999999999876521    11111111122222 457899999999999


Q ss_pred             ccCCCCCCC-----HHHHHHHHH
Q 039021          345 NKDPSKRPT-----FAAVIITLE  362 (464)
Q Consensus       345 ~~dp~~Rpt-----~~~i~~~l~  362 (464)
                      +.||++||+     +.+++.|-+
T Consensus       241 ~~~P~~R~~~~~~~~~~l~~~~~  263 (285)
T cd05632         241 TKDPKQRLGCQEEGAGEVKRHPF  263 (285)
T ss_pred             cCCHhHcCCCcccChHHHHcChh
Confidence            999999999     778888743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-34  Score=274.22  Aligned_cols=229  Identities=18%  Similarity=0.285  Sum_probs=186.4

Q ss_pred             cccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc----
Q 039021          134 TLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE----  203 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~----  203 (464)
                      |.+.+.||+|+||.||+|.+.     +..||+|.++..... ......+..| ..++.++||||+++++++...+.    
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   79 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI   79 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence            567889999999999999874     367999999864332 3345678888 99999999999999998876544    


Q ss_pred             --eEEEEEecCCCChHHHHhhc------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          204 --MILITEYLPKGNLKGILSKK------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       204 --~~lv~E~~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                        .++||||+++|+|..++...      ..+++..++.++.|++.                  ||++++++.+||+|||+
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence              79999999999999998432      36899999999999986                  99999999999999999


Q ss_pred             hhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCC
Q 039021          258 QMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQIS  330 (464)
Q Consensus       258 a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~  330 (464)
                      ++.......     ...++..|+|||++.+..++.++|||||||++|||++ |..||.+.. .+.......+..+..+ .
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~  238 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQP-E  238 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-c
Confidence            987653321     1225678999999988899999999999999999999 899997765 3333333333333333 5


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+++++.+++.+||+.||++|||+.+++++|..+
T Consensus       239 ~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         239 DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            6899999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.1e-34  Score=275.93  Aligned_cols=229  Identities=20%  Similarity=0.236  Sum_probs=189.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|+..+.||.|+||.||+|.++  +..||+|++.....  ......+.+| .++++++||||+++++++.+++..++||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM   81 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            35788899999999999999984  78999999885422  3445678888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++|+|.+++.. +++++..+..++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus        82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06640          82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence            99999999999875 47899999999999875                  9999999999999999997765322   12


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ..++..|+|||++.+..++.++|+|||||++|||++|..||...... ..........+.. ...++..+.+++.+||+.
T Consensus       161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~  239 (277)
T cd06640         161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTL-TGEFSKPFKEFIDACLNK  239 (277)
T ss_pred             ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCC-chhhhHHHHHHHHHHccc
Confidence            34788999999998888999999999999999999999999876522 2222222222222 245788999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|++||++.+++.|.+..
T Consensus       240 ~p~~Rp~~~~il~~~~~~  257 (277)
T cd06640         240 DPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             CcccCcCHHHHHhChHhh
Confidence            999999999999986544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1e-34  Score=276.43  Aligned_cols=235  Identities=23%  Similarity=0.321  Sum_probs=192.5

Q ss_pred             ccccccccccccccceeeeeEEeEEe------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-  200 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-  200 (464)
                      +...+|.+.+.||+|+||.||+|.+.      +..|++|++...  ........+.+| .++++++||||+++++++.. 
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~   80 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED   80 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            44557889999999999999999984      478999998753  234456678888 99999999999999998776 


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEec
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGE  254 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~D  254 (464)
                      +...++++||+++|+|.+++...        ..+++..++.++.|++.                  ||++++++.+||+|
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence            46789999999999999999653        45899999999999986                  99999999999999


Q ss_pred             chhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCc
Q 039021          255 YWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKF  327 (464)
Q Consensus       255 FG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~  327 (464)
                      ||+++......     ....++..|+|||++.+..++.++|||||||++||+++ |+.||.... .+.............
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  240 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQ  240 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCC
Confidence            99998654221     22336778999999998889999999999999999999 999998765 333333333333332


Q ss_pred             cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       328 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      + ..+|+++.+++.+||..||++|||+.++++.|..+..
T Consensus       241 ~-~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         241 P-INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             C-CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            2 4578999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.1e-34  Score=276.19  Aligned_cols=225  Identities=16%  Similarity=0.217  Sum_probs=184.8

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.+  .++.||+|++....  .......+.+| +++++++||||+++++++...+..++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence            577889999999999999997  48899999997642  23345678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-CCCCcC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPNQEN  270 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~~~g  270 (464)
                      |+++|+|..+    ..+++..+..++.|++.                  |||++.++.+||+|||++...... .....|
T Consensus        80 ~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~  155 (279)
T cd06619          80 FMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG  155 (279)
T ss_pred             cCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence            9999999655    35788889999999986                  999999999999999999866533 234469


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc--------chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--------DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      +..|+|||++.+..++.++||||||+++|+|++|+.||.....        ...........+..+....++++.+++.+
T Consensus       156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  235 (279)
T cd06619         156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ  235 (279)
T ss_pred             ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence            9999999999998999999999999999999999999965331        11111111122233334578899999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||+.+|++||++.++++|.+.
T Consensus       236 ~l~~~P~~Rp~~~eil~~~~~  256 (279)
T cd06619         236 CMRKQPKERPAPENLMDHPFI  256 (279)
T ss_pred             HhhCChhhCCCHHHHhcCccc
Confidence            999999999999999998654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.1e-34  Score=277.47  Aligned_cols=232  Identities=18%  Similarity=0.258  Sum_probs=186.3

Q ss_pred             cccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ...+|++.+.||+|+||.||+|.++       +..||+|.+.....  ......+.+| .+++.++||||+++++++.+.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            3457889999999999999999763       44799999875422  2334457788 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc----------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEe
Q 039021          202 EEMILITEYLPKGNLKGILSKK----------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIG  253 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~  253 (464)
                      +..++||||+++|+|.++++..          ..++...++.++.|++.                  |||+++++.+||+
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~  161 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG  161 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence            9999999999999999999652          23456778888889865                  9999999999999


Q ss_pred             cchhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCC
Q 039021          254 EYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPK  326 (464)
Q Consensus       254 DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~  326 (464)
                      |||+++.......     ...++..|+|||++.+..++.++|||||||++|||++ |..||.+.. .+..........+.
T Consensus       162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd05061         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD  241 (288)
T ss_pred             cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999986543221     1235678999999998899999999999999999998 789998766 33333332222233


Q ss_pred             ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          327 FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       327 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+ ..+++.+.+++.+||+.||++|||+.++++.|+..
T Consensus       242 ~~-~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         242 QP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             CC-CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            22 45789999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.4e-34  Score=277.85  Aligned_cols=229  Identities=18%  Similarity=0.227  Sum_probs=188.7

Q ss_pred             ccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+|.+  .++.|++|.+.....   .....+.+| .+++.++||||+++++.+..+...++|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence            34788899999999999999997  488999999886432   234567888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |||+++++|.+++.. ..+++.++..++.|++.                  ||+++.++.+||+|||++.......   .
T Consensus        96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  174 (296)
T cd06654          96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (296)
T ss_pred             ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence            999999999999865 46899999999999986                  9999999999999999988654322   2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc-cCCCCcHHHHHHHHHHc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF-QISRCPNRLKQLIAQCT  344 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl  344 (464)
                      ...|++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ...........+.. .+..+++.+.+++.+||
T Consensus       175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  254 (296)
T cd06654         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  254 (296)
T ss_pred             cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHC
Confidence            33589999999999988899999999999999999999999987652 21111211111111 12457889999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ..+|++|||+.+++++-+.
T Consensus       255 ~~~p~~Rpt~~eil~~~~~  273 (296)
T cd06654         255 DMDVEKRGSAKELLQHQFL  273 (296)
T ss_pred             cCCcccCcCHHHHhhChhh
Confidence            9999999999999987553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.1e-34  Score=274.20  Aligned_cols=230  Identities=19%  Similarity=0.318  Sum_probs=188.6

Q ss_pred             cccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+|++.+.||+|+||.||+|++.     +..+|+|.++....  ......+.+| .++++++||||+++++++..++..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            36888899999999999999873     33789999875422  3345678888 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC
Q 039021          206 LITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      +||||+++|+|.+++... +.+++.++..++.|++.                  |||++.++.+||+|||+++.......
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            999999999999999764 57899999999999976                  99999999999999999987653221


Q ss_pred             ------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHH
Q 039021          267 ------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       267 ------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                            ...++..|++||++.+..++.++||||||+++||+++ |..||.... .+..........++.+ ..+|+.+.+
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  240 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAP-MDCPAALHQ  240 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCC-CCCCHHHHH
Confidence                  1113568999999998889999999999999999887 999998765 2233333332222222 457899999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ++.+||+.+|.+||++.++++.|+.+
T Consensus       241 li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         241 LMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHcccCchhCCCHHHHHHHHHhh
Confidence            99999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=9e-35  Score=278.04  Aligned_cols=230  Identities=23%  Similarity=0.308  Sum_probs=187.1

Q ss_pred             cccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ...+|++.+.||+|+||.||+|.+.       +..||+|++....  .......+.+| .++++++||||+++++++.++
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~   80 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG   80 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            3457899999999999999999863       5789999987542  23445678889 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc----------------------cCCCHHHHHHHHHHHHh------------------h
Q 039021          202 EEMILITEYLPKGNLKGILSKK----------------------VRLDLPTALRYALDIAR------------------N  241 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~----------------------~~l~~~~~~~~~~qi~~------------------N  241 (464)
                      +..++||||+++|+|.+++...                      ..+++..++.++.|++.                  |
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n  160 (288)
T cd05050          81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN  160 (288)
T ss_pred             CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence            9999999999999999999643                      24678888999999976                  9


Q ss_pred             hcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cc
Q 039021          242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FD  314 (464)
Q Consensus       242 ill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~  314 (464)
                      |++++++.+||+|||+++......     .....+..|+|||++.+..++.++|||||||++|||++ |..||.+.. .+
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999987654221     12225678999999998899999999999999999998 888997765 33


Q ss_pred             hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          315 FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ............. +..++.++.+|+.+||+.+|++|||+.|+++.|+
T Consensus       241 ~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         241 VIYYVRDGNVLSC-PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHHhcCCCCCC-CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            3332222222222 2457899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=7.8e-35  Score=278.74  Aligned_cols=227  Identities=19%  Similarity=0.228  Sum_probs=176.1

Q ss_pred             ccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc---CCCceeeeeceeee-----
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL---RHPNILQFLGSIVL-----  200 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l---~hpnIv~~~~~~~~-----  200 (464)
                      +|++.+.||+|+||+||+|++.   ++.||+|.++....... ....+.+| .+++.+   +||||+++++++..     
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC-chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            6888999999999999999873   67899999875432221 22234445 666555   79999999998863     


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      ...+++||||+. ++|.+++...  ..+++..+..++.|++.                  |||++.++.+||+|||+++.
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  159 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence            456899999997 5999998653  45899999999999986                  99999999999999999987


Q ss_pred             hcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccccc----CC---------
Q 039021          261 YEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVN----FE---------  324 (464)
Q Consensus       261 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~----~~---------  324 (464)
                      .....  ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. .+....+...    .+         
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (290)
T cd07862         160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  239 (290)
T ss_pred             ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence            65332  23458999999999998899999999999999999999999998765 1111111000    00         


Q ss_pred             --------CC----ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          325 --------PK----FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       325 --------~~----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                              +.    ...+.+++.+.+|+.+||+.||++|||+.++++|.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp  288 (290)
T cd07862         240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  288 (290)
T ss_pred             cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence                    00    00134678899999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-34  Score=272.34  Aligned_cols=221  Identities=24%  Similarity=0.364  Sum_probs=187.8

Q ss_pred             cccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          138 SMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +.||+|+||.||+|.+.     +..|++|.+.......  ....+.+| +.++.++|+||+++++++.+...+++||||+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence            47999999999999985     7799999998753322  46678889 9999999999999999999999999999999


Q ss_pred             CCCChHHHHhhc---------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          212 PKGNLKGILSKK---------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       212 ~~g~L~~~l~~~---------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ++++|.+++...         ..+++.++..++.|++.                  ||+++.++.+||+|||.+......
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  158 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD  158 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence            999999999875         78999999999999986                  999999999999999999877643


Q ss_pred             -----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHH
Q 039021          265 -----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       265 -----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                           .....+++.|+|||.+....++.++||||||+++|+|++ |..||..... +............. +..+|+++.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  237 (262)
T cd00192         159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPK-PEYCPDELY  237 (262)
T ss_pred             cccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CccCChHHH
Confidence                 223347889999999988889999999999999999999 6999988763 33333332333333 356799999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +++.+||..+|++|||+.+++++|
T Consensus       238 ~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         238 ELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             HHHHHHccCCcccCcCHHHHHHhh
Confidence            999999999999999999999886

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.6e-34  Score=273.31  Aligned_cols=231  Identities=19%  Similarity=0.300  Sum_probs=188.4

Q ss_pred             ccccccccccccceeeeeEEeEEe--C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ..+|+..+.||+|+||.||+|...  +   ..+|+|.+....  .....+.+..| +++++++||||+++++++.+.+..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA   81 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence            346788899999999999999974  3   368999987542  23345678888 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      ++||||+++++|.+++..+ +.+++..+..++.|++.                  ||+++.++.+||+|||++.......
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence            9999999999999999763 67899999999999976                  9999999999999999998664322


Q ss_pred             CC------CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHH
Q 039021          266 PN------QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       266 ~~------~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ..      ...+..|+|||++....++.++|||||||++|||++ |..||.... ......+......+.+ ..++.++.
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~  240 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAP-MDCPSAVY  240 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCC-CCCCHHHH
Confidence            11      113457999999988889999999999999999997 999997765 2333333222222222 45789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +++.+||+.+|++||++.+|++.|+++
T Consensus       241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         241 QLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1e-34  Score=275.22  Aligned_cols=227  Identities=18%  Similarity=0.243  Sum_probs=181.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeC-----
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLG-----  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~-----  201 (464)
                      +..|++.+.||+|+||.||+|.+.  ++.||+|++....    .....+..| .+++++ +||||+++++++...     
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            446888899999999999999984  7899999997542    223456677 888888 799999999998753     


Q ss_pred             -CceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          202 -EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                       ..+++||||+++|+|.+++...  ..+++..+..++.|++.                  ||++++++.+||+|||+++.
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence             4589999999999999999763  46899999999999976                  99999999999999999986


Q ss_pred             hcccC---CCCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCC
Q 039021          261 YEQIH---PNQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISR  331 (464)
Q Consensus       261 ~~~~~---~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~  331 (464)
                      .....   ....|++.|+|||++.     +..++.++|||||||++|||++|..||...... .................
T Consensus       161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  240 (272)
T cd06637         161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK  240 (272)
T ss_pred             cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCC
Confidence            54322   2345899999999986     346788999999999999999999999765421 11111111222223355


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ++.++.+|+.+||..||.+|||+.+++.|-
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~~  270 (272)
T cd06637         241 WSKKFQSFIESCLVKNHSQRPTTEQLMKHP  270 (272)
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhhCC
Confidence            789999999999999999999999998874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=275.96  Aligned_cols=227  Identities=17%  Similarity=0.221  Sum_probs=188.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||.|+||.||++.++  +..||+|++...   .....+.+..| .++++++||||+++++++..+...++|||
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            5889999999999999999984  789999999753   24445678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+++++|.+++... ..+++..++.++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  162 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDT  162 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccce
Confidence            99999999999763 57999999999999986                  9999999999999999987664322   22


Q ss_pred             CcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHH
Q 039021          268 QENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLI  340 (464)
Q Consensus       268 ~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li  340 (464)
                      ..+++.|++||++.     ...++.++||||||+++|+|++|+.||.... ............+.+. +..++.++.+++
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFL  242 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHH
Confidence            34899999999875     3457789999999999999999999998765 2222222222222222 245789999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||+.+|++||++.++++|-+
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~  264 (280)
T cd06611         243 KSCLVKDPDDRPTAAELLKHPF  264 (280)
T ss_pred             HHHhccChhhCcCHHHHhcChh
Confidence            9999999999999999999855

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.1e-34  Score=270.57  Aligned_cols=227  Identities=19%  Similarity=0.282  Sum_probs=189.5

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|+..+.||.|+||.||.++.  ++..+++|.+....... .....+.+| +++++++|+||+++++++.+.+.+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence            478889999999999999987  48899999987654333 345567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |+++|+|.+++...  ..+++..+..++.|+++                  ||++++++.+||+|||+++......   .
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  159 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE  159 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence            99999999999764  56899999999999876                  9999999999999999998765332   2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...|++.|+|||++.+..++.++||||||+++|+|++|..||.... .+.......+..... ...++.++.+++.+||.
T Consensus       160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~  238 (256)
T cd08221         160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV-VSVYSSELISLVHSLLQ  238 (256)
T ss_pred             ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-ccccCHHHHHHHHHHcc
Confidence            3448999999999988889999999999999999999999998765 232222222222222 25678999999999999


Q ss_pred             cCCCCCCCHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITL  361 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l  361 (464)
                      .+|++||++.++++++
T Consensus       239 ~~p~~R~s~~~ll~~~  254 (256)
T cd08221         239 QDPEKRPTADEVLDQP  254 (256)
T ss_pred             cCcccCCCHHHHhhCc
Confidence            9999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.1e-34  Score=273.60  Aligned_cols=228  Identities=23%  Similarity=0.347  Sum_probs=185.4

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|++. ...||+|.++.....    ...+.+| +++++++||||+++++.+. ....++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence            346999999999999999999885 457999999863321    2467888 9999999999999999875 45689999


Q ss_pred             EecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC--
Q 039021          209 EYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~--  266 (464)
                      ||+++|+|.+++...  ..+++..+..++.|+++                  ||++++++.+||+|||.++.......  
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            999999999999753  45889999999999986                  99999999999999999986653321  


Q ss_pred             --CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          267 --NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       267 --~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                        ...++..|+|||+..+..++.++||||||+++|+|++ |..||..... +............. ...+++.+.+++.+
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  238 (262)
T cd05071         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDLMCQ  238 (262)
T ss_pred             ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCC-ccccCHHHHHHHHH
Confidence              2236678999999988889999999999999999999 8889987652 22222222222222 24578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||+.||++||++.++++.|+..
T Consensus       239 ~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         239 CWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HccCCcccCCCHHHHHHHHHHh
Confidence            9999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=7.7e-35  Score=273.26  Aligned_cols=223  Identities=20%  Similarity=0.379  Sum_probs=186.1

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +|++.+.||+|+||.||++...++.||+|.++...     ....+.+| .++++++||||+++++++... ..++||||+
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~   80 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM   80 (254)
T ss_pred             HceeeeeeccCCCCceEecccCCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence            68889999999999999999889999999987531     23567888 999999999999999998764 479999999


Q ss_pred             CCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          212 PKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       212 ~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      ++|+|.+++...  ..+++..++.++.|++.                  ||+++.++.+||+|||+++...........+
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (254)
T cd05083          81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP  160 (254)
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence            999999999754  35789999999999986                  9999999999999999998655443344466


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      ..|+|||++.+..++.++|+|||||++|+|++ |+.||..... +..........+. ++..+|+++.+++.+||+.+|+
T Consensus       161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~  239 (254)
T cd05083         161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME-PPEGCPADVYVLMTSCWETEPK  239 (254)
T ss_pred             ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC-CCCcCCHHHHHHHHHHcCCChh
Confidence            78999999988899999999999999999998 9999987763 2222222232333 2356889999999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039021          350 KRPTFAAVIITLE  362 (464)
Q Consensus       350 ~Rpt~~~i~~~l~  362 (464)
                      +||++++++..|+
T Consensus       240 ~Rp~~~~l~~~l~  252 (254)
T cd05083         240 KRPSFHKLREKLE  252 (254)
T ss_pred             hCcCHHHHHHHHc
Confidence            9999999998875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.4e-35  Score=290.62  Aligned_cols=225  Identities=17%  Similarity=0.176  Sum_probs=181.3

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      +...+|.+.+.||+|+||.||+|.+.  ++.||+|....         ..+.+| ++|++++|||||+++++|......+
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence            34457999999999999999999984  88999997542         245678 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---  264 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---  264 (464)
                      +|||++. ++|..++.....+++.+++.++.||+.                  |||++.++.+||+|||+|+.....   
T Consensus       160 lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        160 LILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            9999996 699999988788999999999999986                  999999999999999999764322   


Q ss_pred             -CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-c-------chhcccc--c------------
Q 039021          265 -HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-F-------DFMHLKS--V------------  321 (464)
Q Consensus       265 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~-------~~~~~~~--~------------  321 (464)
                       .....||+.|+|||++.+..++.++|||||||++|||++|..||.... .       ..+..+.  .            
T Consensus       239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~  318 (391)
T PHA03212        239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ  318 (391)
T ss_pred             ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence             123459999999999999999999999999999999999998764321 0       0000000  0            


Q ss_pred             --------------c----CCCCcc-CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          322 --------------N----FEPKFQ-ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       322 --------------~----~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                    .    .++.+. ...++.++.+||.+||+.||++|||+.|+++|-+.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f  379 (391)
T PHA03212        319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF  379 (391)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence                          0    000000 02356789999999999999999999999998764

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.1e-34  Score=284.47  Aligned_cols=233  Identities=18%  Similarity=0.251  Sum_probs=185.3

Q ss_pred             ccccccccccccceeeeeEEeEE-------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW-------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLG  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~  201 (464)
                      ..+|++.+.||+|+||.||+|.+       .++.||+|+++....  ......+.+| .++.++ +||||+++++++...
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKP   83 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence            34799999999999999999985       267899999976432  3334567778 999999 689999999988654


Q ss_pred             -CceEEEEEecCCCChHHHHhhc---------------------------------------------------------
Q 039021          202 -EEMILITEYLPKGNLKGILSKK---------------------------------------------------------  223 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~~~---------------------------------------------------------  223 (464)
                       ..+++|||||++|+|.+++...                                                         
T Consensus        84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (343)
T cd05103          84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  163 (343)
T ss_pred             CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence             5689999999999999998642                                                         


Q ss_pred             ----------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----CCCcC
Q 039021          224 ----------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQEN  270 (464)
Q Consensus       224 ----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~g  270 (464)
                                ..+++..+..++.||++                  |||+++++.+||+|||+++......     ....+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  243 (343)
T cd05103         164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL  243 (343)
T ss_pred             hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence                      23677888889999986                  9999999999999999998754221     12235


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc--chhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF--DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ++.|+|||++.+..++.++||||||+++|+|++ |..||.....  ........+..+..+ ..+++++.+++.+||+.|
T Consensus       244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC-CCCCHHHHHHHHHHccCC
Confidence            678999999988899999999999999999997 9999977541  222222222222222 446889999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~~~~  366 (464)
                      |++|||+.+|+++|+.+.+
T Consensus       323 p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         323 PSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-36  Score=291.74  Aligned_cols=218  Identities=21%  Similarity=0.279  Sum_probs=183.4

Q ss_pred             ccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCC
Q 039021          139 MVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGN  215 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~  215 (464)
                      +||+|.||+||-|++.  ....|||-+....   ....+-+.+| .+.++|+|.|||+++|.+.+++++-|.||-++||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            7999999999999985  5567999988632   3345567778 99999999999999999999999999999999999


Q ss_pred             hHHHHhhc-cCC--CHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhhhhcccC---CCCcC
Q 039021          216 LKGILSKK-VRL--DLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQMFYEQIH---PNQEN  270 (464)
Q Consensus       216 L~~~l~~~-~~l--~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~~~~~~~---~~~~g  270 (464)
                      |.++|+.+ +++  ++...-.|.+||++                  |+|++- .|.+||+|||-++.+....   .++.|
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence            99999875 788  88899999999987                  888854 6899999999999887544   45569


Q ss_pred             CCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccccc--CCCCccCCCCcHHHHHHHHHHcc
Q 039021          271 SQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVN--FEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       271 t~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      |..|||||++..  ..|+.++|||||||++.||.||++||-... .+....+..-  ..|+.| ..++.+++.||.+|+.
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iP-eelsaeak~FilrcFe  817 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIP-EELSAEAKNFILRCFE  817 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCc-HHHHHHHHHHHHHHcC
Confidence            999999999976  568899999999999999999999997655 3333333322  234443 5688999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      .||..||++++++..
T Consensus       818 pd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  818 PDPCDRPSAKDLLQD  832 (1226)
T ss_pred             CCcccCccHHHhccC
Confidence            999999999999875

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.1e-34  Score=276.11  Aligned_cols=227  Identities=17%  Similarity=0.214  Sum_probs=185.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|++.+.||+|+||.||+|++.  +..|++|.+...   .....+.+.+| .+++.++||||+++++++..++.+++|||
T Consensus        13 ~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          13 VWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             hhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            5889999999999999999984  789999999763   24456677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+++++|..++.+ ...+++..+..++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  169 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS  169 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccce
Confidence            9999999988754 467899999999999987                  9999999999999999987643321   23


Q ss_pred             CcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc-cCCCCcHHHHHHH
Q 039021          268 QENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF-QISRCPNRLKQLI  340 (464)
Q Consensus       268 ~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~li  340 (464)
                      ..+++.|+|||++.     ...++.++|||||||++|+|++|..||...+. ...........+.. .+..++.++.+++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (292)
T cd06644         170 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFL  249 (292)
T ss_pred             ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHH
Confidence            34889999999984     34568899999999999999999999977652 22212222212221 2245788999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||..+|++||++.++++|.+
T Consensus       250 ~~~l~~~p~~Rp~~~~il~~~~  271 (292)
T cd06644         250 KTALDKHPETRPSAAQLLEHPF  271 (292)
T ss_pred             HHHhcCCcccCcCHHHHhcCcc
Confidence            9999999999999999998743

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-34  Score=276.36  Aligned_cols=229  Identities=16%  Similarity=0.217  Sum_probs=187.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++.+.  +..||+|.++...  .......+.+| .++++++||||+++++++...+..++|||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence            5788899999999999999985  8899999987532  23334677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc---cCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CC
Q 039021          210 YLPKGNLKGILSKK---VRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HP  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~  266 (464)
                      |+++++|.+++...   ..+++..+..++.|++.                   ||+++.++.+||+|||+++..... ..
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (286)
T cd06622          80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK  159 (286)
T ss_pred             ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence            99999999998763   47899999999999875                   999999999999999999876432 23


Q ss_pred             CCcCCCCcccccccccC------CCCCcccchhHHHHHHHHHhCCCCCCCCccch----hccccccCCCCccCCCCcHHH
Q 039021          267 NQENSQRNDNSSIASNV------LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF----MHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ...+++.|+|||++.+.      .++.++|||||||++|+|++|+.||.......    .........+..+ ..+++++
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  238 (286)
T cd06622         160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLP-SGYSDDA  238 (286)
T ss_pred             cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCC-cccCHHH
Confidence            34588899999998553      34789999999999999999999997654211    1112222233333 4589999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+||.+||+.+|++||++.+++.+.+..
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~l~~~~~~~  266 (286)
T cd06622         239 QDFVAKCLNKIPNRRPTYAQLLEHPWLV  266 (286)
T ss_pred             HHHHHHHcccCcccCCCHHHHhcChhhh
Confidence            9999999999999999999999986643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=8.2e-35  Score=276.73  Aligned_cols=227  Identities=19%  Similarity=0.234  Sum_probs=188.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|...+.||+|+||.||+|.+.  +..||+|.+.....  ......+.+| .++++++||||+++++++..++..++|||
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence            4777889999999999999874  78999999875422  3345678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++++|.+++.. +.+++..+..++.|+++                  ||++++++.+||+|||+++......   ...
T Consensus        83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06642          83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence            9999999998865 47899999999999986                  9999999999999999998765322   123


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .|+..|+|||++.+..++.++|||||||++|||++|..||..... ...........+.. ...++.++.+++.+||+.+
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~  240 (277)
T cd06642         162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTL-EGQYSKPFKEFVEACLNKD  240 (277)
T ss_pred             cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCC-CcccCHHHHHHHHHHccCC
Confidence            488999999999988899999999999999999999999976542 22222222222222 2457889999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEE  363 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~  363 (464)
                      |++||++.+++.|.+.
T Consensus       241 p~~Rp~~~~il~~~~~  256 (277)
T cd06642         241 PRFRPTAKELLKHKFI  256 (277)
T ss_pred             cccCcCHHHHHHhHHH
Confidence            9999999999998653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.7e-34  Score=275.23  Aligned_cols=226  Identities=16%  Similarity=0.197  Sum_probs=184.9

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |++.+.||+|+||.||+|.+.  +..+++|.+...   .......+.+| ++++.++||||+++++++...+..++||||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            678899999999999999985  678899988653   23445677888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      +++|+|..++.. ..++++..+..++.|++.                  ||+++.++.+||+|||++.......   ...
T Consensus        84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  163 (282)
T cd06643          84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF  163 (282)
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccc
Confidence            999999988764 467999999999999986                  9999999999999999987654322   234


Q ss_pred             cCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCc-cCCCCcHHHHHHHH
Q 039021          269 ENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKF-QISRCPNRLKQLIA  341 (464)
Q Consensus       269 ~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  341 (464)
                      .++..|+|||++.     +..++.++|||||||++|+|++|+.||.... .+..........+.. .+..++.++.+||.
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (282)
T cd06643         164 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLK  243 (282)
T ss_pred             cccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHH
Confidence            5899999999874     4567889999999999999999999998765 222222222212211 22457899999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||+.||++||++.++++|.+
T Consensus       244 ~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         244 KCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             HHccCChhhCcCHHHHhcCCC
Confidence            999999999999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.9e-34  Score=270.66  Aligned_cols=226  Identities=17%  Similarity=0.236  Sum_probs=188.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +.+|++.+.||+|+||.||+|.++  ++.|++|.+...     .....+.+| +++++++||||+++++++.+....|++
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-----EDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-----HHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence            357889999999999999999985  789999999753     225678889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      +||+++++|.+++.. ...+++..+..++.|+++                  ||+++.++.+||+|||++.......   
T Consensus        77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  156 (256)
T cd06612          77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR  156 (256)
T ss_pred             EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence            999999999999975 467899999999999986                  9999999999999999998776432   


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCcc-CCCCcHHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQC  343 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~li~~c  343 (464)
                      ....++..|+|||++.+..++.++|||||||++|+|++|+.||..... ...........+.+. +..++.++.+++.+|
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd06612         157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC  236 (256)
T ss_pred             ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence            223488999999999988999999999999999999999999987652 211111111111111 234678999999999


Q ss_pred             cccCCCCCCCHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l  361 (464)
                      |+.||++|||+.+++.+-
T Consensus       237 l~~~P~~Rps~~~il~~~  254 (256)
T cd06612         237 LVKDPEERPSAIQLLQHP  254 (256)
T ss_pred             HhcChhhCcCHHHHhcCC
Confidence            999999999999998763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.3e-34  Score=272.63  Aligned_cols=226  Identities=24%  Similarity=0.363  Sum_probs=185.0

Q ss_pred             cccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+|++.+.||+|+||.||+|.+. +..||+|.+......    ...+.+| .++++++||||+++++++. ....++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e   80 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence            36888999999999999999875 678999998864332    2457888 9999999999999999875 456899999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC---
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP---  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~---  266 (464)
                      |+++++|.+++...  ..+++..++.++.|++.                  ||++++++.+||+|||+++.......   
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05070          81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence            99999999999753  46899999999999986                  99999999999999999987643221   


Q ss_pred             -CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          267 -NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 -~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                       ...++..|+|||++.+..++.++||||||+++|+|++ |..||.+.. .+.........++..+ ...+..+.+|+.+|
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~  239 (260)
T cd05070         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP-QDCPISLHELMLQC  239 (260)
T ss_pred             cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CcCCHHHHHHHHHH
Confidence             1225678999999988889999999999999999999 899998765 3333333223233332 55789999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |..+|++|||+.++...|+.
T Consensus       240 l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         240 WKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             cccCcccCcCHHHHHHHHhc
Confidence            99999999999999988763

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=301.66  Aligned_cols=237  Identities=21%  Similarity=0.300  Sum_probs=198.8

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCcee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNIL  192 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv  192 (464)
                      .|+++...  ..+.+.||+|.||.|++|..+         ...||||.++....  ....+.+..| .+|+.+ +||||+
T Consensus       290 ~~e~~~~~--l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv  365 (609)
T KOG0200|consen  290 KWEIPREN--LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIV  365 (609)
T ss_pred             ceeechhh--ccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchh
Confidence            56666554  466679999999999999853         34799999997643  3567788889 999998 699999


Q ss_pred             eeeceeeeCCceEEEEEecCCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh----------------
Q 039021          193 QFLGSIVLGEEMILITEYLPKGNLKGILSKKV----------------RLDLPTALRYALDIAR----------------  240 (464)
Q Consensus       193 ~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~----------------  240 (464)
                      .++|+|...+.+++|+||+..|+|.++++.++                .++..+.+.++.|||.                
T Consensus       366 ~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLA  445 (609)
T KOG0200|consen  366 NLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLA  445 (609)
T ss_pred             hheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhh
Confidence            99999999999999999999999999998754                3899999999999986                


Q ss_pred             --hhcccCCCceeEecchhhhhhcccCCC----CcC--CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCC
Q 039021          241 --NLLQDEGDHLKIGEYWVQMFYEQIHPN----QEN--SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNN  311 (464)
Q Consensus       241 --Nill~~~~~~kl~DFG~a~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~  311 (464)
                        |||+.++..+||+|||+|+........    ..|  ...|||||.+....|+.|||||||||+||||++ |..||.+.
T Consensus       446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~  525 (609)
T KOG0200|consen  446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI  525 (609)
T ss_pred             hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence              999999999999999999976543322    122  346999999999999999999999999999999 99999984


Q ss_pred             c--cchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          312 S--FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       312 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      .  .+.......+.+...| ..|+++++++|+.||+.+|++||+|.++.+.+....
T Consensus       526 ~~~~~l~~~l~~G~r~~~P-~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  526 PPTEELLEFLKEGNRMEQP-EHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             CcHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            4  3444445555555544 778999999999999999999999999999998853

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.1e-34  Score=303.03  Aligned_cols=234  Identities=16%  Similarity=0.114  Sum_probs=188.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  ++.||+|++............++.+| +++++++||||+++++++.+++..++|||
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME   82 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP   82 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence            6888999999999999999984  88999999986544444556678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-----------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          210 YLPKGNLKGILSKK-----------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      |++||+|.+++...           ..+++..++.++.||++                  |||++.++.+||+|||+++.
T Consensus        83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~  162 (932)
T PRK13184         83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIF  162 (932)
T ss_pred             cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCccee
Confidence            99999999998631           23556778888899886                  99999999999999999987


Q ss_pred             hccc---------------------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh-cc
Q 039021          261 YEQI---------------------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM-HL  318 (464)
Q Consensus       261 ~~~~---------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~-~~  318 (464)
                      ....                     .....||+.|||||++.+..++.++|||||||++|||++|..||........ ..
T Consensus       163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~  242 (932)
T PRK13184        163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR  242 (932)
T ss_pred             cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh
Confidence            6210                     0123489999999999999999999999999999999999999987552211 11


Q ss_pred             ccccCCCCc-cCCCCcHHHHHHHHHHcccCCCCCC-CHHHHHHHHHHHHH
Q 039021          319 KSVNFEPKF-QISRCPNRLKQLIAQCTNKDPSKRP-TFAAVIITLEEVSA  366 (464)
Q Consensus       319 ~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp-t~~~i~~~l~~~~~  366 (464)
                      .....+... +...+|+.+.+++.+||+.||++|| +++++++.|+....
T Consensus       243 ~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        243 DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            111111111 1245789999999999999999996 56777777877654

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.9e-34  Score=274.44  Aligned_cols=230  Identities=17%  Similarity=0.264  Sum_probs=187.1

Q ss_pred             cccccccccccceeeeeEEeEEe--Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      .+|++.+.||+|+||.||+|++.  +.    .||+|+++...  .......+.+| .+++.++||||+++++++.. ...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~   83 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV   83 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence            46888899999999999999973  43    58999987542  23445667788 99999999999999998875 457


Q ss_pred             EEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +++|||+++|+|.++++. .+.+++..++.++.|++.                  |||+++++.+||+|||+++......
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence            899999999999999976 457999999999999986                  9999999999999999998765322


Q ss_pred             C-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHH
Q 039021          266 P-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 ~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      .     ...+++.|+|||.+.+..++.++|||||||++|||++ |..||..... ...........+.. +..++.++.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  242 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ-PPICTIDVYM  242 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC-CccCCHHHHH
Confidence            1     1225678999999998899999999999999999998 9999976552 22222222223332 2558899999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ++.+||..||++||++.+++..|..+.
T Consensus       243 li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         243 IMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            999999999999999999998887664

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.4e-34  Score=303.82  Aligned_cols=228  Identities=16%  Similarity=0.201  Sum_probs=183.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv  207 (464)
                      +|.+++.||+|+||+||+|++.  +..||+|++...... ......+..| .+|++|+|||||+++++|.+.  ..+|||
T Consensus        14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV   92 (1021)
T PTZ00266         14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL   92 (1021)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence            7999999999999999999984  778999999865433 3345677888 999999999999999998653  568999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh-------------------------hhcccC------------
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR-------------------------NLLQDE------------  246 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~-------------------------Nill~~------------  246 (464)
                      |||+++|+|.++|..    .+.+++..++.|+.||+.                         |||++.            
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            999999999999965    257999999999998875                         888854            


Q ss_pred             -----CCceeEecchhhhhhcccC--CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchh
Q 039021          247 -----GDHLKIGEYWVQMFYEQIH--PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFM  316 (464)
Q Consensus       247 -----~~~~kl~DFG~a~~~~~~~--~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~  316 (464)
                           .+.+||+|||+++......  ....||+.|+|||++.+  ..++.++|||||||+||||++|..||.... ...+
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~ql  252 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQL  252 (1021)
T ss_pred             cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHH
Confidence                 2348999999998765322  23459999999999864  458899999999999999999999997655 2222


Q ss_pred             ccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          317 HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ..... ..+.++....+.++.+||..||..+|.+||++.+++.+-+
T Consensus       253 i~~lk-~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~  297 (1021)
T PTZ00266        253 ISELK-RGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI  297 (1021)
T ss_pred             HHHHh-cCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence            11111 1233344557899999999999999999999999998743

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-35  Score=269.81  Aligned_cols=227  Identities=22%  Similarity=0.225  Sum_probs=184.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-----CCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-----GEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-----~~~~  204 (464)
                      .|...+.||+|+||.|..+.++  |..||+|.+.... ...-..++..+| .+|+.++|+||+.+++++..     -+.+
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            3555789999999999999984  8999999998432 223345566777 99999999999999999875     3568


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---  263 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---  263 (464)
                      |+|+|+|+. ||.+.++..+.|+...+..+++||++                  |+|++.+..+||||||+|+....   
T Consensus       102 YiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~  180 (359)
T KOG0660|consen  102 YLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE  180 (359)
T ss_pred             EEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence            999999954 99999999888999999999999998                  99999999999999999998853   


Q ss_pred             --cCCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccc--------------------
Q 039021          264 --IHPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLK--------------------  319 (464)
Q Consensus       264 --~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~--------------------  319 (464)
                        ..+....|..|.|||++.. ..|+.+.||||.|||+.||++|+.-|.+.+ ...+..+                    
T Consensus       181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a  260 (359)
T KOG0660|consen  181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA  260 (359)
T ss_pred             ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence              2234458999999998855 889999999999999999999999998876 2111111                    


Q ss_pred             ---cc--cCCCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          320 ---SV--NFEPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       320 ---~~--~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                         +.  ...++.+    -+.+++.+.+|+.+||..||.+|+|++|.++|.
T Consensus       261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP  311 (359)
T KOG0660|consen  261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP  311 (359)
T ss_pred             HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence               00  0011111    156789999999999999999999999999984

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3.1e-34  Score=271.82  Aligned_cols=228  Identities=17%  Similarity=0.264  Sum_probs=182.7

Q ss_pred             ccccccccceeeeeEEeEEe--Cc--eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------Cc
Q 039021          135 LHSSMVEQGVFGESQTAKWR--GT--WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------EE  203 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~~  203 (464)
                      .+++.||+|+||.||+|+++  +.  .||+|.++.... .....+.+..| .+++.++||||+++++++...      ..
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            46789999999999999985  32  689999876432 23445678888 999999999999999987532      24


Q ss_pred             eEEEEEecCCCChHHHHhh------ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          204 MILITEYLPKGNLKGILSK------KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~------~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      .++||||+++|+|.+++..      ...+++..++.++.|++.                  |||+++++.+||+|||+++
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            6899999999999988742      235889999999999986                  9999999999999999998


Q ss_pred             hhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCC
Q 039021          260 FYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRC  332 (464)
Q Consensus       260 ~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~  332 (464)
                      .......     ...+++.|++||+..+..++.++|||||||++|||++ |+.||.... .+.......+..+..+ ..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~  239 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQP-PDC  239 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCC
Confidence            7653221     2236778999999999999999999999999999999 899998765 2322333332232322 568


Q ss_pred             cHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            89999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=7.4e-35  Score=273.98  Aligned_cols=227  Identities=19%  Similarity=0.207  Sum_probs=191.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||.|+||.||+|.+.  +..||+|++...........+.+.+| +++++++||||+++++++.++...++|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4788899999999999999985  88999999986544444556788889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~  269 (464)
                      |+.+++|.+++....++++..+..++.|+++                  ||++++++.+||+|||++......  .....
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  160 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS  160 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence            9999999999988778999999999999986                  999999999999999998876543  22345


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      |+..|+|||++.+..++.++|+||||+++|+|++|..||.....   ...........+..+ ..++..+.++|.+||..
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~  239 (258)
T cd05578         161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYP-ATWSTEAIDAINKLLER  239 (258)
T ss_pred             CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCc-ccCcHHHHHHHHHHccC
Confidence            88999999999888899999999999999999999999987652   222222221222333 55789999999999999


Q ss_pred             CCCCCCCH--HHHHHH
Q 039021          347 DPSKRPTF--AAVIIT  360 (464)
Q Consensus       347 dp~~Rpt~--~~i~~~  360 (464)
                      ||.+||++  ++++.|
T Consensus       240 ~p~~R~~~~~~~l~~~  255 (258)
T cd05578         240 DPQKRLGDNLKDLKNH  255 (258)
T ss_pred             ChhHcCCccHHHHhcC
Confidence            99999999  777654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.8e-34  Score=271.77  Aligned_cols=227  Identities=20%  Similarity=0.317  Sum_probs=186.1

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.++||+|+||.||+|..+ ++.||+|.+......    ...+.+| .++++++||||+++++++. .+..++||
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT   79 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence            447888999999999999999984 789999998864322    3467788 9999999999999999874 56789999


Q ss_pred             EecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          209 EYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||+++|+|.+++..  ...+++.++..++.|++.                  ||++++++.++|+|||++.......   
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05067          80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence            99999999999865  346899999999999986                  9999999999999999997765221   


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                       ....++..|+|||++....++.++||||||+++|||++ |+.||.+.. .+.............+ ..++.++.+++.+
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~  238 (260)
T cd05067         160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRP-DNCPEELYELMRL  238 (260)
T ss_pred             ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCC-CCCCHHHHHHHHH
Confidence             12236678999999988889999999999999999999 999998766 2333222222232222 5578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||..+|++|||+++++..|+.
T Consensus       239 ~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         239 CWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HccCChhhCCCHHHHHHHhhc
Confidence            999999999999999988764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.8e-34  Score=268.67  Aligned_cols=222  Identities=19%  Similarity=0.346  Sum_probs=181.8

Q ss_pred             cccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCC
Q 039021          138 SMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGN  215 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~  215 (464)
                      +.||+|+||.||+|... +..||+|.+....  .......+.+| +++++++||||+++++++...+..++||||+++|+
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            36899999999999874 7789999987643  23344567888 99999999999999999999999999999999999


Q ss_pred             hHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----CCcCCC
Q 039021          216 LKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----NQENSQ  272 (464)
Q Consensus       216 L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----~~~gt~  272 (464)
                      |.+++.. ...+++..+..++.|++.                  ||+++.++.+||+|||++........    ...+++
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI  158 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence            9999865 356899999999999875                  99999999999999999876543221    123467


Q ss_pred             CcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       273 ~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      .|+|||++.+..++.++||||||+++|+|++ |..||..... ..........+...+ ..++..+.+++.+||..+|++
T Consensus       159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  237 (250)
T cd05085         159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCP-QKCPDDVYKVMQRCWDYKPEN  237 (250)
T ss_pred             cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcccCccc
Confidence            7999999988889999999999999999998 9999987662 222222222233322 457899999999999999999


Q ss_pred             CCCHHHHHHHHH
Q 039021          351 RPTFAAVIITLE  362 (464)
Q Consensus       351 Rpt~~~i~~~l~  362 (464)
                      ||++.++++.|.
T Consensus       238 Rp~~~~l~~~l~  249 (250)
T cd05085         238 RPKFSELQKELA  249 (250)
T ss_pred             CCCHHHHHHHhc
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.7e-34  Score=275.89  Aligned_cols=228  Identities=19%  Similarity=0.240  Sum_probs=189.3

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||.|+||.||+|.+  .++.|++|.+.....   .....+.+| .+++.++||||+++++++...+.+++||
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            4688999999999999999987  488999999875422   234567888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++++|.+++... .+++.++..++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus        96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  174 (296)
T cd06655          96 EYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST  174 (296)
T ss_pred             EecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence            999999999988754 6899999999999976                  9999999999999999988765332   23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc-cCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~  345 (464)
                      ..++..|+|||.+.+..++.++|||||||++|+|++|+.||...+. ...........+.. .+..+++.+.++|.+||.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (296)
T cd06655         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLE  254 (296)
T ss_pred             cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhh
Confidence            3588999999999988899999999999999999999999987652 22222221112221 225578999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~  363 (464)
                      .||++|||+.+++.|-+.
T Consensus       255 ~dp~~Rpt~~~il~~~~~  272 (296)
T cd06655         255 MDVEKRGSAKELLQHPFL  272 (296)
T ss_pred             cChhhCCCHHHHhhChHh
Confidence            999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=2.9e-34  Score=271.90  Aligned_cols=232  Identities=19%  Similarity=0.321  Sum_probs=189.0

Q ss_pred             cccccccccccccceeeeeEEeEEeC-----ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWRG-----TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      ...+|.+.+.||+|+||.||+|.+.+     ..|++|......  .....+.+.+| .++++++||||+++++++.+ +.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~   80 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP   80 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence            34468888999999999999998742     368999887542  23455678889 99999999999999998875 55


Q ss_pred             eEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 MILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .++||||+++|+|.+++... ..+++..++.++.|++.                  ||+++.++.+||+|||+++.....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            78999999999999999764 46899999999999986                  999999999999999999876433


Q ss_pred             CC----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHH
Q 039021          265 HP----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       265 ~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      ..    ...++..|+|||.+....++.++||||||+++|||++ |..||.... .+.........+...+ ..+|+++.+
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  239 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPTLYS  239 (270)
T ss_pred             cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHH
Confidence            21    1224568999999988889999999999999999996 999998766 3333333333333333 568999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ++.+||..+|++|||+.+++..|..+.
T Consensus       240 li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         240 LMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-34  Score=271.84  Aligned_cols=228  Identities=24%  Similarity=0.350  Sum_probs=188.3

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|.++ +..||+|.+......    ...+.+| .++++++||||+++++++......++||
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            447888999999999999999975 578999998864322    3467888 9999999999999999999889999999


Q ss_pred             EecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          209 EYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||+++++|.+++...  ..+++..+..++.|++.                  ||++++++.+||+|||+++......   
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA  160 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence            999999999999764  47899999999999976                  9999999999999999998765321   


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                       ....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+... ..............+ ..+|+++.+++.+
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~  239 (261)
T cd05034         161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP-PNCPEELYDLMLQ  239 (261)
T ss_pred             hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHH
Confidence             12225678999999998889999999999999999998 9999987652 222222222222222 4568999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||..+|++||+++++.+.|+.
T Consensus       240 ~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         240 CWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HcccCcccCCCHHHHHHHHhc
Confidence            999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.6e-34  Score=270.01  Aligned_cols=222  Identities=23%  Similarity=0.347  Sum_probs=182.6

Q ss_pred             cccccceeeeeEEeEEe---C--ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          138 SMVEQGVFGESQTAKWR---G--TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +.||+|+||.||+|.+.   +  ..||+|.+......  ...+.+.+| .++++++||||+++++++.+ ...++||||+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence            46899999999999974   2  36899999875432  556788889 99999999999999999988 8899999999


Q ss_pred             CCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------
Q 039021          212 PKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------  265 (464)
Q Consensus       212 ~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------  265 (464)
                      ++|+|.+++...  ..+++..+..++.|++.                  ||+++.++.+||+|||+++......      
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence            999999999765  36899999999999986                  9999999999999999998775421      


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ....++..|+|||++.+..++.++|||||||++|+|++ |+.||...+ .+..............+..+|..+.+++.+|
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  237 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQC  237 (257)
T ss_pred             cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHH
Confidence            12347789999999998899999999999999999998 999997665 2222222211111112245789999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |+.+|++|||+.++++.|.
T Consensus       238 l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         238 WAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCCCcccCCCHHHHHHHhc
Confidence            9999999999999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.3e-34  Score=276.49  Aligned_cols=227  Identities=18%  Similarity=0.229  Sum_probs=188.1

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|.+  .++.||+|.+.....   ...+.+.+| .+++.++||||+++++++..++..++||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            4788999999999999999997  488999999975432   234567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++++|.+++.+ ..+++..+..++.|++.                  |||++.++.+||+|||++.......   ..
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~  174 (297)
T cd06656          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  174 (297)
T ss_pred             cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCc
Confidence            99999999999865 46899999999999975                  9999999999999999987654322   23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc-cCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~  345 (464)
                      ..+++.|+|||.+.+..++.++|||||||++|+|++|..||...+. ...........+.. .+..+++.+.+|+.+||.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLE  254 (297)
T ss_pred             ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHcc
Confidence            3588999999999988899999999999999999999999977652 22222222222221 224578899999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLE  362 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~  362 (464)
                      .+|++||++.++++|-+
T Consensus       255 ~~p~~Rps~~~il~~~~  271 (297)
T cd06656         255 MDVDRRGSAKELLQHPF  271 (297)
T ss_pred             CChhhCcCHHHHhcCch
Confidence            99999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=3.6e-34  Score=270.61  Aligned_cols=228  Identities=18%  Similarity=0.270  Sum_probs=185.1

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCc--hHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYH--PVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~--~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~  204 (464)
                      ++|+..+.||+|+||.||+|.+  .+..|++|.+......  ..+....+.+| .++++++||||+++++++.+  ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4688899999999999999997  4889999998754321  23345678888 99999999999999998875  3568


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      +++|||+++++|.+++...+.+++...+.++.|++.                  ||+++.++.+||+|||+++...... 
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            899999999999999988778999999999999986                  9999999999999999998654211 


Q ss_pred             -----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc-ccCCCCccCCCCcHHHHH
Q 039021          266 -----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS-VNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~  338 (464)
                           ....++..|+|||++.+..++.++|||||||++|||++|+.||.... ........ ....+.++ ..+++.+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  240 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP-SHISEHARD  240 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCc-hhcCHHHHH
Confidence                 12348899999999998889999999999999999999999998765 22222221 22223332 456888999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ++ +||..+|++||++++|+.|-
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp  262 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHP  262 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCc
Confidence            98 68889999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=3.2e-34  Score=275.30  Aligned_cols=230  Identities=21%  Similarity=0.276  Sum_probs=186.0

Q ss_pred             ccccccccccccceeeeeEEeEEeC------------------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRG------------------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNI  191 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~------------------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnI  191 (464)
                      ..+|++.+.||+|+||.||+|.+.+                  ..||+|.+.....  ......+.+| +++++++||||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i   81 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI   81 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence            3478899999999999999998632                  4589999886432  3456678889 99999999999


Q ss_pred             eeeeceeeeCCceEEEEEecCCCChHHHHhhcc-----------CCCHHHHHHHHHHHHh------------------hh
Q 039021          192 LQFLGSIVLGEEMILITEYLPKGNLKGILSKKV-----------RLDLPTALRYALDIAR------------------NL  242 (464)
Q Consensus       192 v~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------~l~~~~~~~~~~qi~~------------------Ni  242 (464)
                      +++++++..++..++||||+++++|.+++....           .+++..++.++.|++.                  ||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni  161 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC  161 (296)
T ss_pred             eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence            999999999999999999999999999997654           6899999999999976                  99


Q ss_pred             cccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCCCCc-cc
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE--GKHLQTNNS-FD  314 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~--g~~p~~~~~-~~  314 (464)
                      +++.++.+||+|||+++......     ....+++.|+|||++.+..++.++|||||||++|||++  |..||.... .+
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ  241 (296)
T ss_pred             eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence            99999999999999998654221     12236778999999988889999999999999999998  778887654 22


Q ss_pred             hhcccccc-----CCCC-ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          315 FMHLKSVN-----FEPK-FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       315 ~~~~~~~~-----~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ........     .... ..+..+|+++.+++.+||+.||++|||+.+|++.|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         242 VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            21111110     1111 112456899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.6e-34  Score=277.18  Aligned_cols=229  Identities=14%  Similarity=0.110  Sum_probs=186.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++.+.  ++.|++|.+.............+.+| ++++.++||||+++++.+..++.+++|||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            5788899999999999999985  78999999986543334455677788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc--------
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ--------  263 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~--------  263 (464)
                      |++||+|.+++...+.+++..+..++.|++.                  ||+++.++.+||+|||+++....        
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (305)
T cd05609          82 YVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYE  161 (305)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccc
Confidence            9999999999988888999999999999986                  99999999999999999874210        


Q ss_pred             ----------cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccC-CCCccCCC
Q 039021          264 ----------IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNF-EPKFQISR  331 (464)
Q Consensus       264 ----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~  331 (464)
                                ......++..|+|||.+.+..++.++|||||||++|||++|..||.+..... ........ ..+.....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (305)
T cd05609         162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEA  241 (305)
T ss_pred             cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcccc
Confidence                      0112347889999999988889999999999999999999999998765322 22222111 11112235


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCH---HHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTF---AAVIITL  361 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~---~~i~~~l  361 (464)
                      +|+++.++|.+||+.||++||++   .+++++.
T Consensus       242 ~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~  274 (305)
T cd05609         242 LPADAQDLISRLLRQNPLERLGTGGAFEVKQHR  274 (305)
T ss_pred             CCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence            78999999999999999999984   5555553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.7e-34  Score=271.90  Aligned_cols=229  Identities=21%  Similarity=0.359  Sum_probs=187.7

Q ss_pred             ccccccccccceeeeeEEeEEe--C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|++.+.||+|+||.||+|.++  +   ..||+|++....  .......+..| .++++++||||+++++++.+++..++
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            5778899999999999999984  3   369999987542  24456778889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC
Q 039021          207 ITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN  267 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~  267 (464)
                      ||||+++|+|.+++.. .+.+++.+++.++.|++.                  ||+++.++.+||+|||+++........
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence            9999999999999975 467899999999999976                  999999999999999998866432111


Q ss_pred             -----Cc---CCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHH
Q 039021          268 -----QE---NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       268 -----~~---gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                           ..   .+..|+|||++.+..++.++|||||||++|||++ |..||.... ......+......+.+ ..+|..+.
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~  241 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPP-MDCPTALH  241 (269)
T ss_pred             cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCc-ccCCHHHH
Confidence                 11   2457999999998999999999999999999886 999998765 2233332222222222 56789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +++.+||+.+|++||++.+|+..|+.+
T Consensus       242 ~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         242 QLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.9e-34  Score=269.58  Aligned_cols=227  Identities=19%  Similarity=0.294  Sum_probs=188.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+++..  ++.||+|.+...... ......+.+| .++++++||||+++++++.+.+..++|||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            4778899999999999999983  889999998754332 2344577888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |+++++|.+++...  ..+++..++.++.|++.                  ||+++.++.+||+|||++.......   .
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  159 (256)
T cd08218          80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR  159 (256)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence            99999999999753  35789999999999986                  9999999999999999998664322   1


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...|++.|+|||++.+..++.++|+|||||++|+|++|+.||.... .+.......+..+..+ ..++.++.++|.+||+
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~  238 (256)
T cd08218         160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVS-SHYSYDLRNLVSQLFK  238 (256)
T ss_pred             hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCc-ccCCHHHHHHHHHHhh
Confidence            2348889999999998889999999999999999999999998765 2333233333333333 5678999999999999


Q ss_pred             cCCCCCCCHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITL  361 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l  361 (464)
                      .+|++||++.++++|-
T Consensus       239 ~~p~~Rp~~~~vl~~~  254 (256)
T cd08218         239 RNPRDRPSVNSILEKN  254 (256)
T ss_pred             CChhhCcCHHHHhhCc
Confidence            9999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3e-34  Score=277.06  Aligned_cols=231  Identities=17%  Similarity=0.164  Sum_probs=189.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|...+.||+|+||.||+|.+.  ++.||+|.+........+....+.+| .+++.++||||+++++++.+++..++||
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            35888899999999999999973  88999999975543444555678889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCc
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQE  269 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~  269 (464)
                      ||+. |+|.+++.. .+.+++..+..++.|++.                  ||++++++.+||+|||++...... ....
T Consensus        95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-~~~~  172 (307)
T cd06607          95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-NSFV  172 (307)
T ss_pred             HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-CCcc
Confidence            9997 477777753 467999999999999986                  999999999999999998765432 2445


Q ss_pred             CCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          270 NSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       270 gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      +++.|+|||++.   ...++.++||||||+++|||++|..||..... ...........+......+++++.+++.+||.
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  252 (307)
T cd06607         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQ  252 (307)
T ss_pred             CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc
Confidence            889999999874   46688999999999999999999999987662 22222222333444445578899999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+|++||++.+|+.|.+..
T Consensus       253 ~~p~~Rp~~~~il~~~~~~  271 (307)
T cd06607         253 KIPQDRPSSEELLKHRFVL  271 (307)
T ss_pred             CChhhCcCHHHHhcChhhc
Confidence            9999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=3.2e-34  Score=269.34  Aligned_cols=226  Identities=19%  Similarity=0.244  Sum_probs=185.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-CCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-GEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~~~~lv~  208 (464)
                      +|++.+.||+|+||.||++.++  ++.||+|.+...... ....+.+.+| +++++++||||+++++.+.. ...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence            4788999999999999999984  788999999754322 2344567788 99999999999999998864 44689999


Q ss_pred             EecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---C
Q 039021          209 EYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---H  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~  265 (464)
                      ||+++++|.+++..  ...+++.+++.++.|++.                  ||+++.++.+||+|||+++.....   .
T Consensus        80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~  159 (257)
T cd08223          80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA  159 (257)
T ss_pred             cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence            99999999999975  346899999999999976                  999999999999999999866432   2


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      ....+++.|+|||++.+..++.++||||||+++|+|++|+.||...+... ......+..+.. +..+++++.+++.+||
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l  238 (257)
T cd08223         160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPM-PKDYSPELGELIATML  238 (257)
T ss_pred             ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHh
Confidence            23348999999999999999999999999999999999999998765222 222222222222 2557899999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIIT  360 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~  360 (464)
                      +.||++|||+.+++.|
T Consensus       239 ~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         239 SKRPEKRPSVKSILRQ  254 (257)
T ss_pred             ccCcccCCCHHHHhcC
Confidence            9999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-34  Score=275.65  Aligned_cols=230  Identities=20%  Similarity=0.270  Sum_probs=182.9

Q ss_pred             ccccccccccccceeeeeEEeEEeC----------------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceee
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRG----------------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQ  193 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~  193 (464)
                      ..+|++.+.||+|+||.||+|++.+                ..||+|.++...  .......+.+| +++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~   81 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR   81 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            3478899999999999999998632                248999987642  23445678889 9999999999999


Q ss_pred             eeceeeeCCceEEEEEecCCCChHHHHhhcc------------CCCHHHHHHHHHHHHh------------------hhc
Q 039021          194 FLGSIVLGEEMILITEYLPKGNLKGILSKKV------------RLDLPTALRYALDIAR------------------NLL  243 (464)
Q Consensus       194 ~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~------------~l~~~~~~~~~~qi~~------------------Nil  243 (464)
                      +++++...+..++||||+++++|.+++....            .+++..++.++.|+++                  ||+
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil  161 (295)
T cd05097          82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL  161 (295)
T ss_pred             EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence            9999999999999999999999999986431            4688889999999986                  999


Q ss_pred             ccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCCCCcc-ch
Q 039021          244 QDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE--GKHLQTNNSF-DF  315 (464)
Q Consensus       244 l~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~--g~~p~~~~~~-~~  315 (464)
                      +++++.+||+|||+++......     ....++..|+|||++.+..++.++|||||||++|+|++  |..||..... +.
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence            9999999999999998654322     11225778999999988889999999999999999998  6678876542 21


Q ss_pred             hcccc----ccCCC--CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          316 MHLKS----VNFEP--KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       316 ~~~~~----~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .....    .....  ...+..+|+.+.+|+.+||+.||++|||+++|++.|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         242 IENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            11110    00010  1112447899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.6e-34  Score=268.03  Aligned_cols=226  Identities=22%  Similarity=0.325  Sum_probs=187.4

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++.+  .++.+|+|.+....... .....+.+| +++++++||||+++++.+..++..++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence            477889999999999999987  48899999998654332 345678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhhhhhcccCC--
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a~~~~~~~~--  266 (464)
                      |+++++|.+++...  ..+++..+..++.|+++                  ||+++.+ +.+||+|||+++.......  
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~  159 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY  159 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence            99999999999763  45899999999999986                  9999865 4589999999987754322  


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...|+..|+|||++.+..++.++||||||+++|+|++|+.||...+... ............ +..+++++.+++.+||.
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~  238 (256)
T cd08220         160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPI-SDRYSPDLRQLILSMLN  238 (256)
T ss_pred             ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCC-CCCcCHHHHHHHHHHcc
Confidence            3348899999999998889999999999999999999999998776322 222222222222 24588999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      .+|++|||+.+++.|
T Consensus       239 ~~p~~Rpt~~~ll~~  253 (256)
T cd08220         239 LDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CChhhCCCHHHHhhC
Confidence            999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=6e-34  Score=271.63  Aligned_cols=228  Identities=23%  Similarity=0.344  Sum_probs=182.4

Q ss_pred             cccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--Cce
Q 039021          134 TLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEM  204 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~  204 (464)
                      |.+.+.||+|+||+||++.+      .+..||+|+++...  .......+.+| +++++++||||+++++++...  ..+
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence            47889999999999998764      36789999997642  12344567788 999999999999999988753  458


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+++|+|.+++... .+++.+++.++.|++.                  |||++.++.+||+|||+++...... 
T Consensus        84 ~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          84 QLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             EEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            9999999999999999764 6999999999999986                  9999999999999999998765322 


Q ss_pred             -----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch---hcc-------------ccccCC
Q 039021          266 -----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF---MHL-------------KSVNFE  324 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~---~~~-------------~~~~~~  324 (464)
                           ....++..|+|||++.+..++.++||||||+++|||++|..||.......   ...             ......
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR  242 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence                 12236678999999988889999999999999999999999986533111   000             001111


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      .+. +..++.++.+++.+||+.+|++|||++++++.|+.+.
T Consensus       243 ~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         243 LPC-PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCC-CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            111 2457899999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=4.4e-34  Score=272.91  Aligned_cols=230  Identities=16%  Similarity=0.223  Sum_probs=181.7

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceee-----
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIV-----  199 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~-----  199 (464)
                      ....+|++.+.||+|+||.||++.+.  ++.+|+|++....    .....+.+| .+++++ +||||+++++++.     
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   90 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK   90 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence            34557899999999999999999884  7899999986531    223456778 889998 7999999999884     


Q ss_pred             eCCceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          200 LGEEMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                      .++.+++||||+++|+|.+++..    ...+++..+..++.|+++                  ||++++++.+||+|||+
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~  170 (286)
T cd06638          91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV  170 (286)
T ss_pred             CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence            34568999999999999988753    356888999999999975                  99999999999999999


Q ss_pred             hhhhcccC---CCCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCc-
Q 039021          258 QMFYEQIH---PNQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKF-  327 (464)
Q Consensus       258 a~~~~~~~---~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~-  327 (464)
                      ++......   ....|++.|+|||++..     ..++.++|||||||++|||++|+.||.... ............+.. 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  250 (286)
T cd06638         171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLH  250 (286)
T ss_pred             eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCccc
Confidence            98765322   23348999999998753     457889999999999999999999997765 222222212212221 


Q ss_pred             cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+..++.++.++|.+||+.||++|||+.++++|++
T Consensus       251 ~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~  285 (286)
T cd06638         251 QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF  285 (286)
T ss_pred             CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence            22346789999999999999999999999998864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=5.6e-34  Score=269.12  Aligned_cols=228  Identities=17%  Similarity=0.187  Sum_probs=184.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccC--CchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHI--YHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~  205 (464)
                      +|++.+.||+|+||.||+|.+.  +..||+|.+....  .........+.+| .++++++||||+++++++.+.  ..++
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS   82 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence            5788899999999999999974  8899999986432  1223445678889 999999999999999988764  4688


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---  264 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---  264 (464)
                      +||||+++|+|.+++.....+++..+..++.|++.                  ||+++.++.+||+|||+++.....   
T Consensus        83 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~  162 (265)
T cd06652          83 IFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS  162 (265)
T ss_pred             EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence            99999999999999988778999999999999986                  999999999999999999865421   


Q ss_pred             ---CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHH
Q 039021          265 ---HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                         .....|+..|+|||++.+..++.++|||||||++|+|++|+.||.... ................+...+..+.+++
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  242 (265)
T cd06652         163 GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFL  242 (265)
T ss_pred             ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHH
Confidence               122348899999999988889999999999999999999999998754 2111111111111112245678899999


Q ss_pred             HHHcccCCCCCCCHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+||. +|++||++++|++|.
T Consensus       243 ~~~l~-~p~~Rp~~~~il~~~  262 (265)
T cd06652         243 KRIFV-EAKLRPSADELLRHT  262 (265)
T ss_pred             HHHhc-ChhhCCCHHHHhcCc
Confidence            99995 899999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-34  Score=270.09  Aligned_cols=226  Identities=21%  Similarity=0.254  Sum_probs=186.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.+.  +..+++|++....   ......+.+| .++++++||||+++++++.+.+.++++|
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence            36888899999999999999984  7889999998642   2345678889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          209 EYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      ||+++++|.+++... ..+++.++..++.|++.                  ||++++++.+||+|||++.......   .
T Consensus        80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  159 (262)
T cd06613          80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK  159 (262)
T ss_pred             eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence            999999999999775 78999999999999986                  9999999999999999998765422   2


Q ss_pred             CCcCCCCcccccccccC---CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccccc-CCCCc--cCCCCcHHHHHH
Q 039021          267 NQENSQRNDNSSIASNV---LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVN-FEPKF--QISRCPNRLKQL  339 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~-~~~~~--~~~~~~~~~~~l  339 (464)
                      ...++..|+|||++...   .++.++||||||+++|+|++|+.||..... ......... ..+..  .....+.++.++
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF  239 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence            34588999999998776   889999999999999999999999987651 111111111 11111  113467899999


Q ss_pred             HHHHcccCCCCCCCHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      +.+||..+|.+|||+.+|+.|
T Consensus       240 i~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHcCCChhhCCCHHHHhcC
Confidence            999999999999999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=6.6e-34  Score=268.57  Aligned_cols=227  Identities=21%  Similarity=0.289  Sum_probs=187.7

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||.|+||+||+|.+  ++..+++|++......  .....+.+| .+++.++|+||+++++.+..++..++|||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            688899999999999999997  4789999999754322  255678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc---cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC--
Q 039021          210 YLPKGNLKGILSKK---VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~--  266 (464)
                      |+++++|.++++..   ..+++..+..++.|++.                  ||++++++.+||+|||++........  
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~  159 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT  159 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence            99999999999763   46899999999999986                  99999999999999999987764322  


Q ss_pred             -----CCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccC----CCCcHH
Q 039021          267 -----NQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQI----SRCPNR  335 (464)
Q Consensus       267 -----~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~  335 (464)
                           ...|+..|++||++... .++.++|+|||||++|+|++|+.||.... ............+.+..    ..++++
T Consensus       160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06610         160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKS  239 (267)
T ss_pred             ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHH
Confidence                 22489999999998776 78999999999999999999999998765 22222222222222221    357899


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+++.+||..||++|||+.+|+.|-
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~ll~~p  265 (267)
T cd06610         240 FRKMISLCLQKDPSKRPTAEELLKHK  265 (267)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhCC
Confidence            99999999999999999999999873

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.9e-34  Score=286.02  Aligned_cols=229  Identities=20%  Similarity=0.186  Sum_probs=183.2

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-----ce
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-----EM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-----~~  204 (464)
                      +|++++.||+|+||.||++.+  .++.||+|.+..... .......+.+| ++++.++||||+++++++...+     ..
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence            467889999999999999997  489999999875322 22334567788 9999999999999999998776     78


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      |+||||+. ++|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++...... 
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence            99999997 589999887788999999999999986                  9999999999999999998654221 


Q ss_pred             ---CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------
Q 039021          266 ---PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------  320 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------  320 (464)
                         ....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+. +....+.                    
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  238 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARA  238 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHH
Confidence               22347899999999877 4578999999999999999999999987651 1111000                    


Q ss_pred             ----ccCCCC-c-----cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 ----VNFEPK-F-----QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 ----~~~~~~-~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                          ....++ .     .....++++.+||.+||+.||++|||+.+++.|.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  291 (372)
T cd07853         239 HILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL  291 (372)
T ss_pred             HHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence                000010 0     013357899999999999999999999999998764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6.4e-34  Score=271.56  Aligned_cols=230  Identities=23%  Similarity=0.405  Sum_probs=183.4

Q ss_pred             ccccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--C
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--G  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~  201 (464)
                      +.+|++.+.||+|+||.||++.+      .+..||+|.+...   .......+.+| +++++++||||+++++++..  .
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   79 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR   79 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence            45788999999999999999985      3778999998753   23445678889 99999999999999998754  3


Q ss_pred             CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      ..+++||||+++|+|.+++... ..+++..++.++.|+++                  ||++++++.+||+|||+++...
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence            4689999999999999999753 56899999999999986                  9999999999999999998765


Q ss_pred             ccCCC------CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcc-----------------c
Q 039021          263 QIHPN------QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL-----------------K  319 (464)
Q Consensus       263 ~~~~~------~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~-----------------~  319 (464)
                      .....      ..++..|+|||++.+..++.++|||||||++|||++|..|+..........                 .
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05081         160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL  239 (284)
T ss_pred             CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence            32211      124456999999998889999999999999999999877654332111110                 0


Q ss_pred             cccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ......+ ....++.++.+|+.+||..+|++|||+.+|++.|+.+
T Consensus       240 ~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         240 KNNGRLP-APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             hcCCcCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            1111111 1255789999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=5.1e-34  Score=267.95  Aligned_cols=227  Identities=20%  Similarity=0.262  Sum_probs=188.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCC--chHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIY--HPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +|+..+.||+|+||+||+|...  ++.|++|.+.....  ...+..+.+.+| .+++.++||||+++++++.++..+++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667789999999999999984  88999999875321  223455678888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PN  267 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~  267 (464)
                      |||+++++|.+++.+.+.+++..+..++.|++.                  ||+++.++.+||+|||++.......  ..
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  160 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS  160 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence            999999999999988778999999999999986                  9999999999999999988765432  33


Q ss_pred             CcCCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc-cCCCCccCCCCcHHHHHHHHHHc
Q 039021          268 QENSQRNDNSSIASNVL-DDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV-NFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      ..|+..|++||.+.... ++.++|+|||||++|+|++|+.||.... ......... ...+.. +..+++.+.+++.+||
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l  239 (258)
T cd06632         161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPI-PDHLSDEAKDFILKCL  239 (258)
T ss_pred             cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCc-CCCcCHHHHHHHHHHh
Confidence            45899999999987766 8999999999999999999999997655 222222111 122222 2557899999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIIT  360 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~  360 (464)
                      ..+|++||++.+++.+
T Consensus       240 ~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         240 QRDPSLRPTAAELLEH  255 (258)
T ss_pred             hcCcccCcCHHHHhcC
Confidence            9999999999999876

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=5.6e-34  Score=268.61  Aligned_cols=223  Identities=19%  Similarity=0.148  Sum_probs=188.0

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||.|+||.||+|+++  ++.||+|++.............+.+| .++++++||||+++++.+.+++.+++||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            799999999999996  88999999987544444556778889 999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCcCCCCccc
Q 039021          217 KGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQENSQRNDN  276 (464)
Q Consensus       217 ~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~a  276 (464)
                      .+++.+...+++..+..++.|++.                  ||+++.++.+||+|||+++.....  .....|+..|++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~  160 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA  160 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence            999988778999999999999986                  999999999999999999877643  223458999999


Q ss_pred             ccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--c-chhccccc-cCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          277 SSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--F-DFMHLKSV-NFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       277 PE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~-~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      ||++.+..++.++|+||||+++|+|++|..||....  . ........ ...+.++ ..+++++.++|.+||+.+|++||
T Consensus       161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP-NYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC-cccCHHHHHHHHHHccCChhhCc
Confidence            999988889999999999999999999999997665  1 12222221 2233333 44589999999999999999999


Q ss_pred             C-----HHHHHHHHHH
Q 039021          353 T-----FAAVIITLEE  363 (464)
Q Consensus       353 t-----~~~i~~~l~~  363 (464)
                      +     ++|+++|-+.
T Consensus       240 ~~~~~~~~~l~~~~~~  255 (262)
T cd05572         240 GNLKGGIKDIKKHKWF  255 (262)
T ss_pred             CCcccCHHHHhcChhh
Confidence            9     8999988653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=6.3e-34  Score=268.07  Aligned_cols=227  Identities=20%  Similarity=0.308  Sum_probs=185.9

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||++.++ +..+|+|.+...    ......+.+| +++++++|+||+++++++.+ ...+++|
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~   79 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT   79 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence            346888999999999999999874 667999988753    2334578889 99999999999999999887 7789999


Q ss_pred             EecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC--
Q 039021          209 EYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~--  266 (464)
                      ||+++|+|.+++..  ...+++..++.++.|++.                  ||+++.++.+||+|||+++.......  
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  159 (260)
T cd05073          80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA  159 (260)
T ss_pred             EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence            99999999999975  346788899999999986                  99999999999999999986653221  


Q ss_pred             --CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          267 --NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       267 --~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                        ...++..|+|||++....++.++|+|||||++|+|++ |+.||..... .............. ....+.++.+++.+
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~  238 (260)
T cd05073         160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMR  238 (260)
T ss_pred             ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCC-cccCCHHHHHHHHH
Confidence              1225678999999988889999999999999999999 9999987652 22322222222222 25578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||+.+|++||++.++...|+.
T Consensus       239 ~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         239 CWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HcccCcccCcCHHHHHHHHhc
Confidence            999999999999999988864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=8.4e-34  Score=269.79  Aligned_cols=228  Identities=20%  Similarity=0.237  Sum_probs=188.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      -|...+.||+|+||.||+|.++  +..||+|.+....  .......+.+| .++++++||||+++++++..++..++|||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   82 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME   82 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence            4778889999999999999874  7899999987532  23345678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++++|.+++.. ..+++..+..++.|++.                  ||+++.++.++|+|||++.......   ...
T Consensus        83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06641          83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence            9999999999875 47899999999999986                  9999999999999999987665322   123


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .++..|+|||++.+...+.++|+|||||++|+|++|..||...... ....+.....+.. ...++.++.+++.+||+.+
T Consensus       162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~  240 (277)
T cd06641         162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTL-EGNYSKPLKEFVEACLNKE  240 (277)
T ss_pred             cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCC-CcccCHHHHHHHHHHccCC
Confidence            4888999999998888899999999999999999999999765522 2222222222222 2457899999999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEEV  364 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~~  364 (464)
                      |++||++.+++.|-+..
T Consensus       241 p~~Rp~~~~~l~~~~~~  257 (277)
T cd06641         241 PSFRPTAKELLKHKFIV  257 (277)
T ss_pred             hhhCcCHHHHHhCHHHh
Confidence            99999999999985443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=3.5e-34  Score=268.97  Aligned_cols=224  Identities=19%  Similarity=0.319  Sum_probs=184.5

Q ss_pred             ccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +|++.+.||+|+||.||++.+. +..+|+|.+......    ...+.+| +++++++||||+++++++......++||||
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF   80 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence            5777899999999999999985 788999998764332    2357788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----C
Q 039021          211 LPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----N  267 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----~  267 (464)
                      +++|+|.+++... +.+++..+..++.|++.                  ||+++.++.+||+|||+++.......    .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05112          81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG  160 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence            9999999999753 57899999999998875                  99999999999999999876543221    2


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ..++..|+|||++.+..++.++||||||+++|||++ |..||.... .........+... ..+...++.+.+|+.+||+
T Consensus       161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~  239 (256)
T cd05112         161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL-YKPRLASQSVYELMQHCWK  239 (256)
T ss_pred             CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHcc
Confidence            225678999999998889999999999999999998 999998765 2222222222222 2234468999999999999


Q ss_pred             cCCCCCCCHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITL  361 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l  361 (464)
                      .+|++|||+.+++++|
T Consensus       240 ~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         240 ERPEDRPSFSLLLHQL  255 (256)
T ss_pred             cChhhCCCHHHHHHhh
Confidence            9999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.4e-34  Score=282.03  Aligned_cols=228  Identities=15%  Similarity=0.130  Sum_probs=179.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||++.+.  |..||+|.+...... ......+.+| .+++.++||||+++++++...+      
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            36899999999999999999984  889999999754322 3344566778 9999999999999999987543      


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+|+||||+.+ +|.+.+..  .+++..+..++.|++.                  |||++.++.+||+|||+++.....
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  176 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN  176 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence            47999999976 67777643  5889999999999986                  999999999999999999865432


Q ss_pred             --CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---------------------
Q 039021          265 --HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---------------------  320 (464)
Q Consensus       265 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---------------------  320 (464)
                        .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+. .......                     
T Consensus       177 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (359)
T cd07876         177 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNY  256 (359)
T ss_pred             ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence              2234589999999999999999999999999999999999999986541 1000000                     


Q ss_pred             ccCCCCcc-------------------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 VNFEPKFQ-------------------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 ~~~~~~~~-------------------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ....+.++                   ....++++.+||.+||+.||++|||+.|+++|.+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  318 (359)
T cd07876         257 VENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI  318 (359)
T ss_pred             HhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence            00000000                   01246789999999999999999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=4.4e-34  Score=269.12  Aligned_cols=226  Identities=23%  Similarity=0.348  Sum_probs=183.8

Q ss_pred             cccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+|.+.+.||+|+||.||+|.+. +..+|+|.+.....    ..+.+.+| +++++++||||+++++++. .+..++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   80 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence            46888899999999999999985 45799998875322    23467788 9999999999999999875 456889999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC---
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP---  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~---  266 (464)
                      |+++|+|.++++..  ..+++..+..++.|++.                  ||++++++.+||+|||+++.......   
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence            99999999999753  35789999999999976                  99999999999999999986643221   


Q ss_pred             -CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          267 -NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 -~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                       ...++..|+|||...+..++.++|||||||++|+|++ |..||.+.. .+..........+..+ ...+..+.+++.+|
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~  239 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCP-QGCPESLHELMKLC  239 (260)
T ss_pred             CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-cccCHHHHHHHHHH
Confidence             2236678999999988889999999999999999999 999998765 2333333222233322 45789999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |.+||++||+++++++.|+.
T Consensus       240 l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         240 WKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             ccCCcccCcCHHHHHHHHhc
Confidence            99999999999999998764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=9.2e-34  Score=267.24  Aligned_cols=227  Identities=21%  Similarity=0.330  Sum_probs=188.9

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|.+  .++.|++|.++..... ......+.+| .+++.++|+||+++++.+.+.+.+++|+|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            477889999999999999987  4889999999865432 3466788889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-----
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-----  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-----  266 (464)
                      |+++++|.+++.....+++..+..++.|+++                  ||++++++.+||+|||++........     
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~  159 (264)
T cd06626          80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE  159 (264)
T ss_pred             cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence            9999999999988778999999999999986                  99999999999999999987653321     


Q ss_pred             --CCcCCCCcccccccccCC---CCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC-CCCcHHHHH
Q 039021          267 --NQENSQRNDNSSIASNVL---DDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI-SRCPNRLKQ  338 (464)
Q Consensus       267 --~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~  338 (464)
                        ...++..|+|||++.+..   ++.++||||||+++|+|++|..||....  ............+.++. ..+++.+.+
T Consensus       160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (264)
T cd06626         160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKD  239 (264)
T ss_pred             ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHH
Confidence              234788999999998766   8899999999999999999999997653  22222222222333332 235899999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ++.+||+.+|++|||+.+++.+
T Consensus       240 li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         240 FLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             HHHHHccCCcccCCCHHHHhcC
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=7e-34  Score=270.35  Aligned_cols=223  Identities=16%  Similarity=0.186  Sum_probs=182.3

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|+||+||+|.++  |+.||+|.+.............+..| +++++++||||+++++++...+..|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999874  88999999986443333445566778 999999999999999999999999999999999999


Q ss_pred             HHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCCcCCCCc
Q 039021          217 KGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQENSQRN  274 (464)
Q Consensus       217 ~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~~gt~~y  274 (464)
                      .+++.+.+  .+++.+++.++.|+++                  ||+++.++.+||+|||++.......  ....++..|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY  160 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence            99997654  7999999999999986                  9999999999999999998765322  223478899


Q ss_pred             ccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          275 DNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       275 ~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      +|||++.+..++.++|||||||++|+|++|+.||.....    ..+........... +..+++.+.++|.+||+.||++
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  239 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEY-PDKFSPEAKDLCEALLQKDPEK  239 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccC-CccCCHHHHHHHHHHccCChhH
Confidence            999999888899999999999999999999999976542    11111111112222 2457899999999999999999


Q ss_pred             CC-----CHHHHHHHHHH
Q 039021          351 RP-----TFAAVIITLEE  363 (464)
Q Consensus       351 Rp-----t~~~i~~~l~~  363 (464)
                      ||     ++.+++.|.+.
T Consensus       240 R~~~~~~~~~~ll~h~~~  257 (277)
T cd05577         240 RLGCRGGSADEVREHPLF  257 (277)
T ss_pred             ccCCCcccHHHHHhChhh
Confidence            99     77778887554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=7.7e-34  Score=270.70  Aligned_cols=227  Identities=17%  Similarity=0.236  Sum_probs=181.6

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee------
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL------  200 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~------  200 (464)
                      ...|++.+.||+|+||.||+|++.  ++.||+|++...    ......+..| .+++++ +||||+++++++..      
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence            346888899999999999999984  789999998753    2234456777 888888 79999999999863      


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      .+.++++|||+++|+|.+++...  ..+++..+..++.|+++                  ||++++++.+||+|||++..
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~  170 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  170 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence            45789999999999999999653  45888888899999976                  99999999999999999886


Q ss_pred             hccc---CCCCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCC
Q 039021          261 YEQI---HPNQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISR  331 (464)
Q Consensus       261 ~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~  331 (464)
                      ....   .....|++.|+|||++.     ...++.++|||||||++|||++|..||.... ............+......
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  250 (282)
T cd06636         171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKK  250 (282)
T ss_pred             hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccc
Confidence            6432   22344899999999875     3567889999999999999999999997654 2222222222223333356


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ++.++.+||.+||..||.+|||+.+|++|-
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~~~  280 (282)
T cd06636         251 WSKKFIDFIEGCLVKNYLSRPSTEQLLKHP  280 (282)
T ss_pred             cCHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence            899999999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-34  Score=276.60  Aligned_cols=230  Identities=19%  Similarity=0.207  Sum_probs=189.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.+.  +..||+|.+.............+.+| ++++.++||||+++++.+.+....++|||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            5788899999999999999984  78999999987654444456678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      |+.+++|.+++...  ..+++..+..++.|++.                  ||+++.++.+||+|||++.......    
T Consensus        82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (316)
T cd05574          82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS  161 (316)
T ss_pred             ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence            99999999998753  57899999999999986                  9999999999999999987653211    


Q ss_pred             ----------------------------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhc
Q 039021          266 ----------------------------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMH  317 (464)
Q Consensus       266 ----------------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~  317 (464)
                                                  ....|+..|+|||++.+..++.++||||||+++|+|++|+.||...+.....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~  241 (316)
T cd05574         162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF  241 (316)
T ss_pred             cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence                                        0124788999999999988999999999999999999999999876632222


Q ss_pred             cccccCCCCccC-CCCcHHHHHHHHHHcccCCCCCCC----HHHHHHHHH
Q 039021          318 LKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPT----FAAVIITLE  362 (464)
Q Consensus       318 ~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt----~~~i~~~l~  362 (464)
                      .........++. ...++++.+++.+||+.||++|||    +.+++.|-+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~  291 (316)
T cd05574         242 SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF  291 (316)
T ss_pred             HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCch
Confidence            211122222222 236899999999999999999999    888888744

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.4e-34  Score=278.02  Aligned_cols=229  Identities=18%  Similarity=0.231  Sum_probs=182.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|+++  ++.||+|.++....  ......+.+| +++++++||||+++++++..++..++|||
T Consensus         7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   84 (309)
T cd07872           7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE   84 (309)
T ss_pred             ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence            6888999999999999999984  78899999975432  2223356678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+++ +|.+++... ..+++..+..++.|++.                  |||++.++.+||+|||+++......   ..
T Consensus        85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (309)
T cd07872          85 YLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN  163 (309)
T ss_pred             CCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence            9985 888888654 45899999999999986                  9999999999999999997654322   23


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc---------------------cCC
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV---------------------NFE  324 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~---------------------~~~  324 (464)
                      ..+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+. +.......                     ...
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF  243 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhc
Confidence            348899999998865 5688999999999999999999999987551 11110000                     000


Q ss_pred             CCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          325 PKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       325 ~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +..       ....+++++.+||.+||..||.+|||+.|+++|.+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  290 (309)
T cd07872         244 PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR  290 (309)
T ss_pred             CccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence            000       0134688999999999999999999999999987643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.6e-34  Score=269.66  Aligned_cols=231  Identities=18%  Similarity=0.285  Sum_probs=189.7

Q ss_pred             cccccccccccceeeeeEEeEEe--Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      .+|++.+.||+|+||.||+|.++  |.    .||+|.+.....  ......+.+| .++++++||||+++++++.. ...
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence            46888899999999999999874  32    689998876532  3445677888 99999999999999999887 788


Q ss_pred             EEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      ++||||+++|+|.+++.. ...+++..++.++.|++.                  ||++++++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence            999999999999999976 357999999999999987                  9999999999999999998765322


Q ss_pred             C-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hhccccccCCCCccCCCCcHHHHH
Q 039021          266 P-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 ~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      .     ...++..|+|||.+....++.++||||||+++||+++ |+.||.....+ .............+ ..++..+.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  242 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQP-PICTIDVYM  242 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCC-CCCCHHHHH
Confidence            1     1124578999999988889999999999999999998 99999887633 22222222222222 457899999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ++.+||..+|.+||++.++++.|..+..
T Consensus       243 ~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         243 VLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-35  Score=276.00  Aligned_cols=227  Identities=16%  Similarity=0.190  Sum_probs=195.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|.++.+||+|+||+|-+|..+  .+.+|||+++++.....+..+--..| ++|... +-|.+++++.+|+.-+.+|+||
T Consensus       350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM  429 (683)
T KOG0696|consen  350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM  429 (683)
T ss_pred             ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence            6777899999999999999987  45799999998766555555555667 777776 5689999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~~  267 (464)
                      ||+.||+|--.|+.-+.+.+..+..|+..||-                  |||||.+|++||+|||+++..-   ....+
T Consensus       430 EyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkT  509 (683)
T KOG0696|consen  430 EYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKT  509 (683)
T ss_pred             EEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceee
Confidence            99999999999998899999999999999975                  9999999999999999998643   23456


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .+|||.|+|||++...+|+..+|+|||||+||||+.|+.||.+.+.+.+...+......+| ..+|.++.++++..|.+.
T Consensus       510 FCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP-KslSkEAv~ickg~ltK~  588 (683)
T KOG0696|consen  510 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP-KSLSKEAVAICKGLLTKH  588 (683)
T ss_pred             ecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc-ccccHHHHHHHHHHhhcC
Confidence            7799999999999999999999999999999999999999999986655555555556665 668999999999999999


Q ss_pred             CCCCCCH-----HHHHHH
Q 039021          348 PSKRPTF-----AAVIIT  360 (464)
Q Consensus       348 p~~Rpt~-----~~i~~~  360 (464)
                      |.+|...     .+|..|
T Consensus       589 P~kRLGcg~~ge~di~~H  606 (683)
T KOG0696|consen  589 PGKRLGCGPEGERDIREH  606 (683)
T ss_pred             CccccCCCCccccchhhC
Confidence            9999643     456555

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.8e-34  Score=269.54  Aligned_cols=228  Identities=19%  Similarity=0.295  Sum_probs=186.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC---CCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR---HPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~---hpnIv~~~~~~~~~~~~~l  206 (464)
                      .|+..+.||+|+||.||+|.+.  ++.||+|.+....  .......+.+| .++++++   ||||+++++++.++...++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            3677889999999999999983  8899999987542  23344567788 8888886   9999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||||+++++|.++++.. .+++..++.++.|++.                  ||++++++.+||+|||++.......   
T Consensus        80 v~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             EEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence            99999999999998664 8999999999999986                  9999999999999999998765432   


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ....|+..|+|||++.+ ..++.++|||||||++|+|++|..||..... ...........+.++...++.++.+++.+|
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC  238 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHH
Confidence            22348899999998865 4578999999999999999999999987652 222222222233333334789999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |..||++||++.+++.+-+.
T Consensus       239 l~~~p~~R~~~~~il~~~~~  258 (277)
T cd06917         239 LDEEPKERLSAEELLKSKWI  258 (277)
T ss_pred             cCCCcccCcCHHHHhhChHh
Confidence            99999999999999987543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.4e-35  Score=285.96  Aligned_cols=225  Identities=16%  Similarity=0.241  Sum_probs=192.2

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccC-CchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc--eEEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHI-YHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE--MILI  207 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~--~~lv  207 (464)
                      .++..+||+|+|-+||+|.+.  |-.||.-.++... .......++|..| .+|+.|+|||||++|+++.+...  +-+|
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            455679999999999999984  7788866655322 2345667899999 99999999999999999998655  7899


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------hhcccCC-CceeEecchhhhhhcccCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------NLLQDEG-DHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------Nill~~~-~~~kl~DFG~a~~~~~~~~  266 (464)
                      +|++..|+|+.|+++++.++...+..|++||++                    ||+++.+ |.|||+|+|+|+.......
T Consensus       122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a  201 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA  201 (632)
T ss_pred             eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence            999999999999999999999999999999987                    9999765 8899999999999886655


Q ss_pred             CC-cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          267 NQ-ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~-~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      .. .|||.|||||+.. ..|+..+||||||+.|.||+|+.+||....  .++...+..+.+|.-...--.+++++||.+|
T Consensus       202 ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekC  280 (632)
T KOG0584|consen  202 KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKC  280 (632)
T ss_pred             ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHH
Confidence            44 5999999999887 889999999999999999999999998876  4555555556555443333478999999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~  360 (464)
                      |.. .+.|||+.|+|.+
T Consensus       281 l~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  281 LAT-KSERLSAKELLKD  296 (632)
T ss_pred             hcC-chhccCHHHHhhC
Confidence            999 9999999999987

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.7e-34  Score=269.60  Aligned_cols=229  Identities=19%  Similarity=0.268  Sum_probs=185.0

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCc-------hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYH-------PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-------~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      +|.+.+.||+|+||.||+|..  +++.||+|.++.....       .....+.+..| .++++++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            577889999999999999987  4889999998642111       11233567788 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..++||||+++|+|.+++++.+.+++..+..++.|++.                  ||+++.++.+||+|||+++.....
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            99999999999999999988888999999999999986                  999999999999999999865432


Q ss_pred             -----CCCCcCCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc-ccCCCCccC---CCC
Q 039021          265 -----HPNQENSQRNDNSSIASNVL--DDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS-VNFEPKFQI---SRC  332 (464)
Q Consensus       265 -----~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~-~~~~~~~~~---~~~  332 (464)
                           .....|+..|+|||++....  ++.++|+||||+++|+|++|..||.... ........ ....+.++.   ..+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence                 12334889999999987654  7899999999999999999999997654 22121111 111222211   346


Q ss_pred             cHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.++.+++.+||..+|++|||+.++++|.
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~  270 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQHP  270 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence            89999999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1e-33  Score=268.12  Aligned_cols=224  Identities=23%  Similarity=0.345  Sum_probs=179.5

Q ss_pred             cccccceeeeeEEeEEe--Cc--eEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEec
Q 039021          138 SMVEQGVFGESQTAKWR--GT--WVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +.||+|+||.||+|++.  +.  .+++|.++..  ........+.+| ++++++ +||||+++++++...+.+++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            36899999999999984  33  5688888743  223445577888 999999 8999999999999999999999999


Q ss_pred             CCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          212 PKGNLKGILSKKV----------------RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       212 ~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                      ++|+|.+++....                .+++..++.++.|++.                  |||+++++.+||+|||+
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence            9999999997532                4788999999999986                  99999999999999999


Q ss_pred             hhhhcccCC--CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCc
Q 039021          258 QMFYEQIHP--NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       258 a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~  333 (464)
                      ++.......  ....+..|+|||++....++.++|||||||++|||++ |..||..... ..............+ ..++
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~  237 (270)
T cd05047         159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP-LNCD  237 (270)
T ss_pred             ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCC-CcCC
Confidence            864332111  1224667999999988889999999999999999997 9999977652 222222222222222 4578


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .++.+++.+||..||.+|||+.+++..|..+
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         238 DEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            8999999999999999999999999998776

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=8.7e-34  Score=268.11  Aligned_cols=228  Identities=17%  Similarity=0.248  Sum_probs=186.7

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCc---hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYH---PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~---~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|+..+.||+|+||.||++..  +++.||+|++......   .......+..| ..+++++||||+++++++.+.+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            367788999999999999987  4889999999754321   12345678889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~--  265 (464)
                      ||||+++++|.+++.+.+++++..+..++.|++.                  ||+++.++ .+||+|||++.......  
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            9999999999999988888999999999999987                  99998776 59999999998765331  


Q ss_pred             -----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhcccc-ccCCCCccCCCCcHH
Q 039021          266 -----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKS-VNFEPKFQISRCPNR  335 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~  335 (464)
                           ....|+..|+|||++.+..++.++||||||+++|+|++|..||.....    ....... ....+..+ ..++++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  239 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIP-EHLSPG  239 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCc-hhhCHH
Confidence                 123478899999999888899999999999999999999999975441    1111111 11122222 457899


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+++.+||..+|++|||+.+++.|-
T Consensus       240 ~~~~i~~~l~~~p~~R~~~~~ll~~~  265 (268)
T cd06630         240 LRDVTLRCLELQPEDRPPSRELLKHP  265 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhcCc
Confidence            99999999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=6.8e-34  Score=266.99  Aligned_cols=224  Identities=25%  Similarity=0.369  Sum_probs=186.0

Q ss_pred             ccccccccceeeeeEEeEEeC------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          135 LHSSMVEQGVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+.+.||+|+||.||++++..      ..||+|++.....  ......+..| ..++.++||||+++++++.+.+..+++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence            567899999999999999853      7899999976422  2256678889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccC--CCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC
Q 039021          208 TEYLPKGNLKGILSKKVR--LDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN  267 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~--l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~  267 (464)
                      |||+++++|.+++.....  +++..+..++.|++.                  ||++++++.+||+|||+++........
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            999999999999976543  999999999999976                  999999999999999999876643211


Q ss_pred             ----CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHH
Q 039021          268 ----QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       268 ----~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                          ..+++.|+|||.+.+..++.++||||||+++|+|++ |..||.... ............... +..++.++.+++.
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  238 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK-PENCPPEIYKLML  238 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC-CCcCCHHHHHHHH
Confidence                227789999999988889999999999999999998 889998765 233333322223332 3558999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +||..||++|||+.++++.|
T Consensus       239 ~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      239 QCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHCcCChhhCcCHHHHHhhC
Confidence            99999999999999998753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.2e-34  Score=289.54  Aligned_cols=224  Identities=17%  Similarity=0.154  Sum_probs=175.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-------  201 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-------  201 (464)
                      .+|++++.||+|+||.||+|.+.  ++.||+|.+....       ....+| .+|+.++|||||++++++...       
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence            46999999999999999999984  7899999886531       123467 999999999999999887532       


Q ss_pred             -CceEEEEEecCCCChHHHHh----hccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchh
Q 039021          202 -EEMILITEYLPKGNLKGILS----KKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWV  257 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~  257 (464)
                       ..+++||||+++ +|.+++.    ....+++..++.++.||++                  |||++.++ .+||+|||+
T Consensus       139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence             246799999985 7777664    3467999999999999986                  99998665 699999999


Q ss_pred             hhhhcccC--CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--cC--------
Q 039021          258 QMFYEQIH--PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--NF--------  323 (464)
Q Consensus       258 a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~~--------  323 (464)
                      |+......  ....||+.|+|||++.+ ..|+.++|||||||++|||++|..||.+.. .+....+..  +.        
T Consensus       218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  297 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE  297 (440)
T ss_pred             chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            98765322  23458999999999876 468999999999999999999999998765 111111100  00        


Q ss_pred             ------CCCc-----------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 ------EPKF-----------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 ------~~~~-----------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                            ...+           .+...|+++.+||.+||++||.+|||+.+++.|.+.
T Consensus       298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f  354 (440)
T PTZ00036        298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF  354 (440)
T ss_pred             hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhH
Confidence                  0000           013467899999999999999999999999999764

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=8.7e-34  Score=270.38  Aligned_cols=230  Identities=13%  Similarity=0.219  Sum_probs=182.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+++++  |..||+|.++...... ...+.+.+. ..++.++||||+++++++..++..++|||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            5788899999999999999984  8899999998653222 222333333 45777899999999999999999999999


Q ss_pred             ecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          210 YLPKGNLKGILSK----KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      |++ |+|.+++..    ...+++..+..++.|++.                   ||+++.++.+||+|||+++...... 
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  159 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA  159 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            997 588877753    357899999999999986                   9999999999999999998765332 


Q ss_pred             -CCCcCCCCccccccccc----CCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcHHHHH
Q 039021          266 -PNQENSQRNDNSSIASN----VLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                       ....|+..|+|||++.+    ..++.++|+|||||++|+|++|+.||....  .+..........+..+...+|+++.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  239 (283)
T cd06617         160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQD  239 (283)
T ss_pred             cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHH
Confidence             22458899999998865    456889999999999999999999997543  22222223333344444568999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|.+||..+|++||++.+++.|-+..
T Consensus       240 li~~~l~~~p~~Rp~~~~il~~~~~~  265 (283)
T cd06617         240 FVNKCLKKNYKERPNYPELLQHPFFE  265 (283)
T ss_pred             HHHHHccCChhhCcCHHHHhcCchhh
Confidence            99999999999999999999986544

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.5e-33  Score=266.69  Aligned_cols=224  Identities=19%  Similarity=0.237  Sum_probs=179.6

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +.....||+|+||.||+|.++  +..|++|.+....   ....+.+.+| .++++++||||+++++++..++..++||||
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence            334468999999999999974  7789999987642   3345678889 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc-cCC--CHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhhhhcccC---
Q 039021          211 LPKGNLKGILSKK-VRL--DLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~l--~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~~~~~~~---  265 (464)
                      +++++|.+++..+ ..+  ++..+..++.||+.                  ||+++. ++.+||+|||++.......   
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  166 (268)
T cd06624          87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT  166 (268)
T ss_pred             CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc
Confidence            9999999999764 455  78888888889876                  999976 6789999999997664322   


Q ss_pred             CCCcCCCCcccccccccC--CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcc--ccccCCCCccCCCCcHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNV--LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHL--KSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~li  340 (464)
                      ....|++.|+|||++...  .++.++||||||+++|+|++|..||..... .....  ......+.++ ..+++++.+|+
T Consensus       167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  245 (268)
T cd06624         167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIP-ESLSAEAKNFI  245 (268)
T ss_pred             ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCC-cccCHHHHHHH
Confidence            223488999999998654  378899999999999999999999976441 11111  1112222332 45789999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+||+.+|++|||+.+++.|.
T Consensus       246 ~~~l~~~p~~Rpt~~~ll~~~  266 (268)
T cd06624         246 LRCFEPDPDKRASAHDLLQDP  266 (268)
T ss_pred             HHHcCCCchhCCCHHHHHhCC
Confidence            999999999999999999874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.1e-33  Score=267.87  Aligned_cols=221  Identities=22%  Similarity=0.279  Sum_probs=171.5

Q ss_pred             cccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          138 SMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      +.||+|+||.||+|.+.    +..+|+|.++....  ......+.+| .++++++||||+++++++.+....++||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence            36899999999999863    45789998876432  2233467788 99999999999999999999999999999999


Q ss_pred             CCChHHHHhhc-----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          213 KGNLKGILSKK-----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       213 ~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      +|+|.++++..     ..+++..++.++.|+++                  ||+++.++.+||+|||+++......    
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            99999999643     24567778888888876                  9999999999999999997544221    


Q ss_pred             -CCCcCCCCcccccccccC-------CCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCcc----CCC
Q 039021          266 -PNQENSQRNDNSSIASNV-------LDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQ----ISR  331 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~----~~~  331 (464)
                       ....++..|+|||++.+.       .++.++||||||+++|||++ |..||.... .+.............+    ...
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05087         159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLP  238 (269)
T ss_pred             CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCC
Confidence             123477889999988642       35789999999999999996 999997655 2222221111111111    134


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .++.+.+++.+|| .+|++|||+++|++.|
T Consensus       239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l  267 (269)
T cd05087         239 LSDRWYEVMQFCW-LQPEQRPSAEEVHLLL  267 (269)
T ss_pred             CChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence            6789999999999 6899999999999775

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=8.9e-34  Score=269.92  Aligned_cols=224  Identities=16%  Similarity=0.176  Sum_probs=177.1

Q ss_pred             ccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-H---HHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          139 MVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-C---KLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~---~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      .||+|+||.||++.+.  ++.||+|.+.............+.+| .   ++...+||||+++++++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999984  88999999976543322222233334 3   3344579999999999999999999999999


Q ss_pred             CCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-CCCcCCCC
Q 039021          213 KGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-PNQENSQR  273 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-~~~~gt~~  273 (464)
                      +|+|.+++..++.+++..+..++.|++.                  |||+++++.+||+|||++....... ....|+..
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  160 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcC
Confidence            9999999988888999999999999986                  9999999999999999987654322 23459999


Q ss_pred             cccccccc-cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          274 NDNSSIAS-NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       274 y~aPE~~~-~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      |+|||++. +..++.++|||||||++|+|++|..||.....   .............. +..+++++.++|.+||..||+
T Consensus       161 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~  239 (279)
T cd05633         161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL-PDSFSPELKSLLEGLLQRDVS  239 (279)
T ss_pred             ccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC-ccccCHHHHHHHHHHhcCCHH
Confidence            99999986 46689999999999999999999999975431   11111111112222 255789999999999999999


Q ss_pred             CCC-----CHHHHHHHHHH
Q 039021          350 KRP-----TFAAVIITLEE  363 (464)
Q Consensus       350 ~Rp-----t~~~i~~~l~~  363 (464)
                      +||     |++++++|.+.
T Consensus       240 ~R~~~~~~~~~~~~~h~~~  258 (279)
T cd05633         240 KRLGCLGRGAQEVKEHVFF  258 (279)
T ss_pred             HhcCCCCCCHHHHHhCccc
Confidence            999     59999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.3e-33  Score=266.06  Aligned_cols=225  Identities=17%  Similarity=0.304  Sum_probs=178.3

Q ss_pred             cccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-CCceEEEEEe
Q 039021          138 SMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-GEEMILITEY  210 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~  210 (464)
                      +.||+|+||.||+|.+.     +..||+|.+...  ........+.+| .+++.++||||+++++++.. ++..++||||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            46899999999999863     357999988642  223445677788 99999999999999997764 5568999999


Q ss_pred             cCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------
Q 039021          211 LPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------  265 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------  265 (464)
                      +++|+|.+++.+. ..+++..+..++.|++.                  |||+++++.+||+|||+++......      
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  158 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN  158 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence            9999999999763 45678888888889876                  9999999999999999997653211      


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                       ....++..|+|||.+.+..++.++|||||||++|||++ |..||.... .+..........+.. +..+|+.+.+++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  237 (262)
T cd05058         159 HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ-PEYCPDPLYEVMLS  237 (262)
T ss_pred             cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC-CCcCCHHHHHHHHH
Confidence             12236778999999988889999999999999999999 566776655 232222222222222 24578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ||..+|++||++.+++..|+.+.
T Consensus       238 cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         238 CWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HcCCChhhCCCHHHHHHHHHHHh
Confidence            99999999999999999998763

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-33  Score=263.89  Aligned_cols=222  Identities=22%  Similarity=0.326  Sum_probs=182.6

Q ss_pred             cccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCC
Q 039021          138 SMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGN  215 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~  215 (464)
                      +.||+|+||.||++.+. ++.|++|.+.....  ......+.+| +++++++||||+++++++.+....++||||+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            47999999999999986 89999999886533  2455678889 99999999999999999999999999999999999


Q ss_pred             hHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-----CCcCC
Q 039021          216 LKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-----NQENS  271 (464)
Q Consensus       216 L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-----~~~gt  271 (464)
                      |.+++.. ...+++..+..++.|++.                  |||++.++.+||+|||+++.......     ...++
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP  158 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence            9999965 456889999999988875                  99999999999999999986542211     12245


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchh-ccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFM-HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      ..|+|||++.+..++.++|||||||++|+|++ |..||........ ........... +..+|.++.+++.+||..+|+
T Consensus       159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~  237 (251)
T cd05041         159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPA-PQLCPEEIYRLMLQCWAYDPE  237 (251)
T ss_pred             eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCC-CccCCHHHHHHHHHHhccChh
Confidence            67999999988899999999999999999999 8899977652222 22222222222 256789999999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039021          350 KRPTFAAVIITLE  362 (464)
Q Consensus       350 ~Rpt~~~i~~~l~  362 (464)
                      +|||+.++++.|.
T Consensus       238 ~Rp~~~ell~~l~  250 (251)
T cd05041         238 NRPSFSEIYNELQ  250 (251)
T ss_pred             hCcCHHHHHHHhh
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=6.4e-34  Score=268.54  Aligned_cols=229  Identities=16%  Similarity=0.233  Sum_probs=191.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++.++  ++.||+|.+.....  ......+.+| +++++++||||+++++.+...+.+++|||
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME   79 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence            5777899999999999999985  88999999986532  3445677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CCCC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~~  268 (464)
                      |+++++|.+++... ..+++..+..++.|++.                   ||++++++.+||+|||.+...... ....
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  159 (265)
T cd06605          80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF  159 (265)
T ss_pred             ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence            99999999999875 78999999999999986                   999999999999999998876532 2235


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc------cchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS------FDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      .++..|+|||++.+..++.++||||||+++|+|++|+.||....      .+..........+..+...+++++.++|.+
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (265)
T cd06605         160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNL  239 (265)
T ss_pred             cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHH
Confidence            68999999999998999999999999999999999999997652      122222222223333323378999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||..||++|||+.+++.+-+.
T Consensus       240 ~l~~~p~~Rpt~~~ll~~~~~  260 (265)
T cd06605         240 CLIKDPRERPSYKELLEHPFI  260 (265)
T ss_pred             HcCCCchhCcCHHHHhhCchh
Confidence            999999999999999988653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=277.81  Aligned_cols=234  Identities=18%  Similarity=0.209  Sum_probs=200.0

Q ss_pred             ccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .......|+.-++||+||||+||-++.+  |+.+|.|.+.+..+...+......+| .+|.+++.++||.+-..|++.+.
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA  259 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence            3444556888899999999999999874  99999999987766555666667788 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          204 MILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      +++||..|+||||.-+|.+.+  .++++.++.|+.+|+.                  |||||+.|+++|+|.|+|..+..
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~  339 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE  339 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence            999999999999998887755  8999999999999986                  99999999999999999998875


Q ss_pred             cCC--CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccCCCCccCCCCcHHHH
Q 039021          264 IHP--NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       264 ~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ..+  ...||.+|||||++.+..|+...|+|||||++|||+.|+.||....    .+.+..........++ ..+|++++
T Consensus       340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~-~kFS~eak  418 (591)
T KOG0986|consen  340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS-DKFSEEAK  418 (591)
T ss_pred             CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc-cccCHHHH
Confidence            543  3469999999999999999999999999999999999999998764    2233333344445555 77999999


Q ss_pred             HHHHHHcccCCCCCCC-----HHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPT-----FAAVIITL  361 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt-----~~~i~~~l  361 (464)
                      +|.+.+|.+||.+|..     +.++.+|.
T Consensus       419 slc~~LL~Kdp~~RLGcrg~ga~evk~Hp  447 (591)
T KOG0986|consen  419 SLCEGLLTKDPEKRLGCRGEGAQEVKEHP  447 (591)
T ss_pred             HHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence            9999999999999974     56787773

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.5e-33  Score=265.54  Aligned_cols=226  Identities=19%  Similarity=0.273  Sum_probs=186.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~~lv  207 (464)
                      +|++.+.||.|+||.||++.+.  +..||+|.+...... ....+.+.+| +++++++||||+++++++..  ....+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence            4778899999999999999874  789999999764433 3445667888 99999999999999998764  4568999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh-----------------------hhcccCCCceeEecchhhhh
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR-----------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~-----------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      |||+++++|.+++..    ..++++..++.++.|++.                       ||+++.++.+||+|||++..
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence            999999999999965    367899999999888873                       99999999999999999988


Q ss_pred             hcccC---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCCCcHHH
Q 039021          261 YEQIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       261 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      .....   ....+++.|+|||++.+..++.++||||||+++|+|++|..||...... ..........+.. +...+..+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  238 (265)
T cd08217         160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRI-PYRYSSEL  238 (265)
T ss_pred             ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCC-ccccCHHH
Confidence            76433   2335899999999999888999999999999999999999999877622 2222222222222 25678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .+++.+||+.+|++|||+.+|++|
T Consensus       239 ~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         239 NEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHHHccCCcccCCCHHHHhhC
Confidence            999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=3.3e-34  Score=292.39  Aligned_cols=232  Identities=16%  Similarity=0.141  Sum_probs=178.7

Q ss_pred             cccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC------CCceeeeecee
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR------HPNILQFLGSI  198 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~------hpnIv~~~~~~  198 (464)
                      +....+|++.+.||+|+||+||+|.+.  ++.||||+++..    ......+..| .+++.++      |++|++++++|
T Consensus       125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            344567999999999999999999984  789999999742    1222334455 6666654      45699999988


Q ss_pred             eeC-CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCC----------
Q 039021          199 VLG-EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGD----------  248 (464)
Q Consensus       199 ~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~----------  248 (464)
                      ... .+++||||++ +++|.+++.+++.+++..+..++.||+.                   |||++.++          
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~  279 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA  279 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence            764 5789999988 6799999988889999999999999976                   99998765          


Q ss_pred             ------ceeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc-
Q 039021          249 ------HLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS-  320 (464)
Q Consensus       249 ------~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~-  320 (464)
                            .+||+|||.+...........||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.. .+....+. 
T Consensus       280 ~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~  359 (467)
T PTZ00284        280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK  359 (467)
T ss_pred             cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence                  4999999998765555556679999999999999999999999999999999999999998655 11111100 


Q ss_pred             --ccC-----------------------CCCcc--------------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          321 --VNF-----------------------EPKFQ--------------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       321 --~~~-----------------------~~~~~--------------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                        ...                       .+...              .....+.+.+||.+||+.||++|||+.|+++|.
T Consensus       360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp  439 (467)
T PTZ00284        360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHP  439 (467)
T ss_pred             HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCc
Confidence              000                       00000              001145678999999999999999999999997


Q ss_pred             HHH
Q 039021          362 EEV  364 (464)
Q Consensus       362 ~~~  364 (464)
                      +..
T Consensus       440 ~~~  442 (467)
T PTZ00284        440 YVL  442 (467)
T ss_pred             ccc
Confidence            643

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.1e-34  Score=272.74  Aligned_cols=227  Identities=23%  Similarity=0.294  Sum_probs=184.8

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |++++.||+|+||+||+++..  ++.||+|++........ ......+| .++++++||||+++++++.+....++||||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccccc
Confidence            678899999999999999995  66899999997543222 22233457 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh---cccCCCCc
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY---EQIHPNQE  269 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~---~~~~~~~~  269 (464)
                      +.+++|.+++...+.+++..+..++.|+++                  ||+++.++.+||+|||.+...   ........
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  159 (260)
T PF00069_consen   80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV  159 (260)
T ss_dssp             ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999997789999999999999987                  999999999999999999753   22333455


Q ss_pred             CCCCcccccccc-cCCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccC-CCCc-cCCCCcHHHHHHHHH
Q 039021          270 NSQRNDNSSIAS-NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNF-EPKF-QISRCPNRLKQLIAQ  342 (464)
Q Consensus       270 gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~  342 (464)
                      ++..|+|||++. +..++.++||||+|+++|+|++|..||....    ........... .... .....++++.++|.+
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  239 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKK  239 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHH
Confidence            899999999998 7889999999999999999999999998872    11111111100 0000 012235899999999


Q ss_pred             HcccCCCCCCCHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ||+.||++|||+.++++|.
T Consensus       240 ~l~~~p~~R~~~~~l~~~~  258 (260)
T PF00069_consen  240 MLSKDPEQRPSAEELLKHP  258 (260)
T ss_dssp             HSSSSGGGSTTHHHHHTSG
T ss_pred             HccCChhHCcCHHHHhcCC
Confidence            9999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-33  Score=265.89  Aligned_cols=224  Identities=20%  Similarity=0.213  Sum_probs=178.7

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-H-HHHhcCCCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-C-KLRELRHPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~-~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.||+|+||.||+|.++  ++.||+|++.............+..| . .....+||||+++++++..++.+|+||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999984  88999999976433223333344445 3 44556899999999999999999999999999


Q ss_pred             CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCCCCcc
Q 039021          214 GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND  275 (464)
Q Consensus       214 g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~  275 (464)
                      ++|.+++...+.+++..+..++.|++.                  ||++++++.+||+|||+++.... .....|+..|+
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~  160 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-NKKFVGTPDYL  160 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-cccCCCCcCcc
Confidence            999999988788999999999999986                  99999999999999999886543 23445889999


Q ss_pred             cccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCc---cCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          276 NSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF---QISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       276 aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      +||++.+..++.++||||||+++|+|++|..||..................+   ....+++++.+++.+||+.+|++||
T Consensus       161 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  240 (260)
T cd05611         161 APETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRL  240 (260)
T ss_pred             ChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHcc
Confidence            9999988889999999999999999999999998766322221111111111   1235789999999999999999999


Q ss_pred             CH---HHHHHHHH
Q 039021          353 TF---AAVIITLE  362 (464)
Q Consensus       353 t~---~~i~~~l~  362 (464)
                      ++   .|++.|.+
T Consensus       241 ~~~~~~~~l~~~~  253 (260)
T cd05611         241 GANGYQEIKSHPF  253 (260)
T ss_pred             CCCcHHHHHcChH
Confidence            65   57766643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.2e-33  Score=268.25  Aligned_cols=229  Identities=22%  Similarity=0.262  Sum_probs=186.6

Q ss_pred             cccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|.+...||+|+||.||+|+++       ...|++|.+....  .......+.+| +++++++||||+++++++.+.+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   82 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP   82 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence            46888999999999999999963       4578999887532  23345678889 99999999999999999999899


Q ss_pred             eEEEEEecCCCChHHHHhhcc---------CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecch
Q 039021          204 MILITEYLPKGNLKGILSKKV---------RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~---------~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG  256 (464)
                      .++||||+++|+|.+++....         .+++..+..++.|++.                  ||+++.++.+||+|||
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~  162 (275)
T cd05046          83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS  162 (275)
T ss_pred             ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc
Confidence            999999999999999997654         6899999999999986                  9999999999999999


Q ss_pred             hhhhhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchhccccccCCCCc-cCC
Q 039021          257 VQMFYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFEPKF-QIS  330 (464)
Q Consensus       257 ~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~-~~~  330 (464)
                      +++......    ....++..|+|||.+.+..++.++||||||+++|+|++ |..||..................+ ...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  242 (275)
T cd05046         163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPE  242 (275)
T ss_pred             cccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCC
Confidence            987653221    12236778999999988888999999999999999999 888997655222222221111111 224


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+|+.+.+++.+||+.+|++|||+.+++..|+
T Consensus       243 ~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         243 GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            58899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-35  Score=257.44  Aligned_cols=226  Identities=13%  Similarity=0.196  Sum_probs=182.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +.+++..||.|..|.|++++++  |...|||.+.+..  +.+...++... +++.+. +.|+||+.+|+|..+..++|.|
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM  170 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM  170 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence            4566789999999999999996  6899999999753  34444555555 554444 5899999999999999999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccC--C
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIH--P  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~--~  266 (464)
                      |.|.- -+..++++ ++++++..+-++...+.+                   |||+|+.|++||||||++..+-+..  .
T Consensus       171 elMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht  249 (391)
T KOG0983|consen  171 ELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT  249 (391)
T ss_pred             HHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence            99853 33444433 468888887777777654                   9999999999999999998877554  3


Q ss_pred             CCcCCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC-CCCcHHHHHHH
Q 039021          267 NQENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI-SRCPNRLKQLI  340 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~li  340 (464)
                      ...|-+.|||||-+.   ...|+.++|||||||+++||.||.+||.+..  .+.+..+....+|.++. ..+++.+.+|+
T Consensus       250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv  329 (391)
T KOG0983|consen  250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFV  329 (391)
T ss_pred             cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHH
Confidence            445999999999884   3578999999999999999999999999965  55565565555655554 34899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ..||.+|+.+||...++++|-
T Consensus       330 ~~CL~kd~r~RP~Y~~Ll~h~  350 (391)
T KOG0983|consen  330 KDCLTKDHRKRPKYNKLLEHP  350 (391)
T ss_pred             HHHhhcCcccCcchHHHhcCc
Confidence            999999999999999999873

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.3e-33  Score=267.74  Aligned_cols=229  Identities=23%  Similarity=0.350  Sum_probs=183.5

Q ss_pred             ccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--Cc
Q 039021          133 NTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~  203 (464)
                      -|++.+.||+|+||.||++++      .+..||+|.++...  .......+.+| .++++++||||+++++++...  ..
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            478889999999999999985      27789999987542  23445678889 999999999999999998875  56


Q ss_pred             eEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 MILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .++||||++|++|.+++.+. ..+++..+..++.|++.                  ||+++.++.+||+|||+++.....
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  162 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence            89999999999999999654 46899999999999986                  999999999999999999876532


Q ss_pred             C------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----------------hhcccccc
Q 039021          265 H------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----------------FMHLKSVN  322 (464)
Q Consensus       265 ~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----------------~~~~~~~~  322 (464)
                      .      ....++..|+|||++.+..++.++|||||||++|||+++..|+......                .......+
T Consensus       163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05079         163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG  242 (284)
T ss_pred             ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence            1      2334777899999998888999999999999999999987664322100                00001111


Q ss_pred             CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       323 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ...+. +..+++.+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus       243 ~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         243 KRLPR-PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ccCCC-CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            11221 255889999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.5e-33  Score=271.57  Aligned_cols=233  Identities=16%  Similarity=0.266  Sum_probs=186.8

Q ss_pred             ccccccccccccceeeeeEEeEEe--Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      +.+|+..+.||+|+||.||+|.+.  +.    .||+|.+.....  ......+.+| .+++.++||||+++++++... .
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~   82 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T   82 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence            446888899999999999999973  43    578888875422  3334467888 999999999999999988754 5


Q ss_pred             eEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 MILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .++++||+++|+|.+++..+ ..+++..+..++.|++.                  |||++.++.+||+|||+++.....
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~  162 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD  162 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence            67999999999999999764 46899999999999986                  999999999999999999876532


Q ss_pred             CC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHH
Q 039021          265 HP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       265 ~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ..     ...++..|+|||++.+..++.++|||||||++|||++ |..||.+.. .........+..+.. +..++..+.
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  241 (303)
T cd05110         163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ-PPICTIDVY  241 (303)
T ss_pred             ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCHHHH
Confidence            21     2225678999999998999999999999999999997 999998765 222222222222222 245788999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +++.+||..+|++||+++++++.|+.+...
T Consensus       242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         242 MVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.5e-35  Score=268.62  Aligned_cols=224  Identities=23%  Similarity=0.290  Sum_probs=181.8

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--C--
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--E--  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~--  202 (464)
                      .+..|...+.+|.|+||.||+|...  +..||||....+.       +.-..| ++|++++|||||++.-+|...  .  
T Consensus        22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~   94 (364)
T KOG0658|consen   22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDE   94 (364)
T ss_pred             eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence            3456888899999999999999985  7899999987542       133568 999999999999999888742  2  


Q ss_pred             -ceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhh
Q 039021          203 -EMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQ  258 (464)
Q Consensus       203 -~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a  258 (464)
                       ...+||||++. +|.++++.    +..++...+..|.+||.+                  |+|+|.+ |.+||||||.|
T Consensus        95 ~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen   95 VYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             hHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence             35689999997 99999974    578999999999999987                  9999987 89999999999


Q ss_pred             hhhcccCCCCc--CCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc--ccC---------
Q 039021          259 MFYEQIHPNQE--NSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS--VNF---------  323 (464)
Q Consensus       259 ~~~~~~~~~~~--gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~--~~~---------  323 (464)
                      +.+....+...  -|..|+|||.+.+ ..|+.+.||||.||++.||+-|++-|++.+ .+.+..+.  .+.         
T Consensus       174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            99876655543  8999999999987 789999999999999999999999999876 21111110  000         


Q ss_pred             C--------CCc--------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          324 E--------PKF--------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       324 ~--------~~~--------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .        +.+        -....++++.+|+.++|..+|.+|.++.+++.|-
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~  307 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP  307 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence            0        110        1144789999999999999999999999999883

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=2.8e-33  Score=271.57  Aligned_cols=230  Identities=16%  Similarity=0.167  Sum_probs=189.7

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|...+.||+|+||.||++++  .+..||+|.+........+....+.+| +++++++|||++++++++.+++..++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            377889999999999999998  378999999986544444556678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      |+.| +|.+.+.. ..++++.++..++.|++.                  ||+++.++.+||+|||++..... .....|
T Consensus       106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-~~~~~~  183 (317)
T cd06635         106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-ANSFVG  183 (317)
T ss_pred             CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-cccccC
Confidence            9975 88777754 567999999999999986                  99999999999999999876543 224458


Q ss_pred             CCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          271 SQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       271 t~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ++.|+|||++.   ...++.++|||||||++|+|++|..||.... ............+......+++.+.+++.+||+.
T Consensus       184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  263 (317)
T cd06635         184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQK  263 (317)
T ss_pred             CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccC
Confidence            99999999974   4568899999999999999999999997765 2323333333333444456789999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|.+||++.+++.+++..
T Consensus       264 ~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         264 IPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             CcccCcCHHHHHhChhhh
Confidence            999999999999998765

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.1e-33  Score=267.75  Aligned_cols=222  Identities=23%  Similarity=0.337  Sum_probs=179.4

Q ss_pred             cccccceeeeeEEeEEeC--------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          138 SMVEQGVFGESQTAKWRG--------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +.||+|+||.||+|++..        ..||+|.+....  .......+.+| .+++.++||||+++++++...+..++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence            368999999999998742        579999887532  12335567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc-------cCCCHHHHHHHHHHHHh------------------hhcccCCC-----ceeEecchhh
Q 039021          209 EYLPKGNLKGILSKK-------VRLDLPTALRYALDIAR------------------NLLQDEGD-----HLKIGEYWVQ  258 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~------------------Nill~~~~-----~~kl~DFG~a  258 (464)
                      ||+++|+|.+++...       ..+++.+++.++.|++.                  ||+++.++     .+||+|||++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            999999999999642       34788999999999875                  99998877     8999999999


Q ss_pred             hhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCC
Q 039021          259 MFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISR  331 (464)
Q Consensus       259 ~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~  331 (464)
                      +......     ....++..|+|||++.+..++.++|||||||++|+|++ |+.||.... .+....+........ +..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~  237 (269)
T cd05044         159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQK-PEN  237 (269)
T ss_pred             cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCC-ccc
Confidence            7654221     12235788999999999999999999999999999998 999997665 333222222222222 255


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +|+.+.+++.+||..+|.+||++.++++.|.
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         238 CPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             chHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            7899999999999999999999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.4e-33  Score=269.69  Aligned_cols=227  Identities=19%  Similarity=0.237  Sum_probs=174.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHh---cCCCceeeeeceeeeC-----
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE---LRHPNILQFLGSIVLG-----  201 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~---l~hpnIv~~~~~~~~~-----  201 (464)
                      +|++.+.||+|+||.||+|+++  ++.||+|.++...... .....+.+| .+++.   ++||||+++++++...     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            4778899999999999999984  8899999987543221 111233445 55554   4799999999988652     


Q ss_pred             CceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      ..+++||||+.+ +|.+++...  ..+++..+..++.|++.                  |||++.++.+||+|||+++..
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence            458999999985 899888653  45899999999999986                  999999999999999999876


Q ss_pred             cccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc------------------
Q 039021          262 EQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS------------------  320 (464)
Q Consensus       262 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~------------------  320 (464)
                      ....  ....||..|+|||++.+..++.++|||||||++|+|++|+.||..... .......                  
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence            5332  234589999999999988999999999999999999999999976541 1110000                  


Q ss_pred             -ccCCCC------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          321 -VNFEPK------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       321 -~~~~~~------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                       ....+.      ...+.+++++.+++.+||+.||++|||+.+++.|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp  286 (288)
T cd07863         239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP  286 (288)
T ss_pred             ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence             000000      00134678899999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.2e-33  Score=269.87  Aligned_cols=228  Identities=14%  Similarity=0.191  Sum_probs=183.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|+++  ++.||+|++...... ....+.+.+| .++++++||||+++++++..+...++|||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            5788899999999999999984  889999998754321 2233457788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |++++.|..++.....+++..++.++.|+++                  ||+++.++.+||+|||++.......   ...
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence            9999988888877778999999999999986                  9999999999999999998765432   223


Q ss_pred             cCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--------------------c-CCC
Q 039021          269 ENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--------------------N-FEP  325 (464)
Q Consensus       269 ~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--------------------~-~~~  325 (464)
                      .++..|+|||++.+ ..++.++||||||+++|+|++|+.||.+... +.......                    . ..+
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP  240 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence            47889999999876 5678999999999999999999999986541 11110000                    0 000


Q ss_pred             Cc--------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          326 KF--------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       326 ~~--------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ..        ....++..+.+|+.+||+.+|++|||+.+++.|.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~  284 (286)
T cd07847         241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP  284 (286)
T ss_pred             CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence            00        0134678899999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=3e-33  Score=264.66  Aligned_cols=230  Identities=15%  Similarity=0.220  Sum_probs=184.4

Q ss_pred             ccccccccccceeeeeEEeEEe---CceEEEEEeeccCC-------chHHHHHhHHHH-HHHH-hcCCCceeeeeceeee
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIY-------HPVKMVLSAKDN-CKLR-ELRHPNILQFLGSIVL  200 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~-------~~~~~~~~~~~e-~~l~-~l~hpnIv~~~~~~~~  200 (464)
                      +|++.+.||+|+||.||+|.++   +..+|+|.+.....       ........+..| .+++ .++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4778899999999999999985   57899999864321       122334556667 6665 4799999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchh
Q 039021          201 GEEMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~  257 (464)
                      ++..++||||+++++|.+++..    ...+++..++.++.|++.                   ||+++.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            9999999999999999988743    357899999999999876                   99999999999999999


Q ss_pred             hhhhcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcH
Q 039021          258 QMFYEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       258 a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      +.......  ....|+..|++||++.+..++.++||||||+++|+|++|+.||..... ............+.....+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSE  240 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCH
Confidence            98765432  233489999999999988899999999999999999999999976652 222222222222222235789


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ++.+++.+||+.||++||++.++..++.
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            9999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.5e-33  Score=270.89  Aligned_cols=227  Identities=17%  Similarity=0.222  Sum_probs=184.7

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |.....||+|+||.||++.+.  ++.||+|.+....   ......+.+| .+++.++||||+++++++..++..++||||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence            334558999999999999874  8899999987532   2234567788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCc
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQE  269 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~  269 (464)
                      +++++|.+++.. ..+++..+..++.|++.                  ||+++.++.+||+|||+++......   ....
T Consensus       100 ~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~  178 (297)
T cd06659         100 LQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV  178 (297)
T ss_pred             CCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccccccee
Confidence            999999988765 47899999999999986                  9999999999999999997654322   2344


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCc-cCCCCcHHHHHHHHHHcccC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~d  347 (464)
                      |+..|+|||++.+..++.++|||||||++|||++|+.||.... .+..........+.. ....+++.+.++|.+||+.+
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~  258 (297)
T cd06659         179 GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTRE  258 (297)
T ss_pred             cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCC
Confidence            8999999999998889999999999999999999999997665 222222211111111 12457889999999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEEV  364 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~~  364 (464)
                      |++||++.++++|.+..
T Consensus       259 P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         259 PQERATAQELLDHPFLL  275 (297)
T ss_pred             cccCcCHHHHhhChhhc
Confidence            99999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2.4e-33  Score=268.86  Aligned_cols=228  Identities=19%  Similarity=0.231  Sum_probs=187.5

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||++..  ++..||+|.+....   ....+.+.+| .++++++||||+++++++...+..++|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            4688889999999999999987  47889999986432   2234567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++++|.+++.+. .+++.++..++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus        96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~  174 (293)
T cd06647          96 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  174 (293)
T ss_pred             ecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence            999999999998764 6889999999999986                  9999999999999999987654322   22


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCcc-CCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~  345 (464)
                      ..|++.|++||++....++.++|||||||++|+|++|+.||...+. ...........+.+. ...++..+.+++.+||+
T Consensus       175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  254 (293)
T cd06647         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE  254 (293)
T ss_pred             ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHcc
Confidence            3488899999999888899999999999999999999999987652 222222222222222 23468899999999999


Q ss_pred             cCCCCCCCHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~  363 (464)
                      .+|++||++.+++.|-+.
T Consensus       255 ~~p~~Rp~~~~il~h~~~  272 (293)
T cd06647         255 MDVEKRGSAKELLQHPFL  272 (293)
T ss_pred             CChhhCcCHHHHhcCHHH
Confidence            999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=2.6e-33  Score=266.60  Aligned_cols=224  Identities=15%  Similarity=0.176  Sum_probs=178.7

Q ss_pred             ccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH----HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          139 MVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN----CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e----~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      .||+|+||.||+|.+.  ++.||+|.+.............+..|    ..++..+||||+++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999874  78999999986543322222223333    34455689999999999999999999999999


Q ss_pred             CCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-CCCcCCCC
Q 039021          213 KGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-PNQENSQR  273 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-~~~~gt~~  273 (464)
                      ||+|.+++...+.+++..+..++.|+++                  ||+++.++.+||+|||+++...... ....|+..
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcC
Confidence            9999999988888999999999999986                  9999999999999999998664322 23459999


Q ss_pred             ccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc---cchhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          274 NDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       274 y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      |+|||++.+ ..++.++|||||||++|+|++|+.||....   ............+.++ ..+++++.+++.+||..+|.
T Consensus       161 y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~li~~~l~~~p~  239 (278)
T cd05606         161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP-DSFSPELRSLLEGLLQRDVN  239 (278)
T ss_pred             CcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCC-CcCCHHHHHHHHHHhhcCHH
Confidence            999999875 468999999999999999999999998763   1111222222233333 45789999999999999999


Q ss_pred             CCC-----CHHHHHHHHHH
Q 039021          350 KRP-----TFAAVIITLEE  363 (464)
Q Consensus       350 ~Rp-----t~~~i~~~l~~  363 (464)
                      +||     ++.++++|.+.
T Consensus       240 ~R~~~~~~~~~~ll~~~~~  258 (278)
T cd05606         240 RRLGCLGRGAQEVKEHPFF  258 (278)
T ss_pred             hccCCCCCCHHHHHhCccc
Confidence            999     99999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-33  Score=266.78  Aligned_cols=227  Identities=16%  Similarity=0.240  Sum_probs=182.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCC----
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGE----  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~----  202 (464)
                      ..+|++.+.||+|+||.||+|.++  ++.|++|++....    .....+.+| .+++++ +||||+++++++....    
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            347899999999999999999984  7889999988642    234567888 999998 7999999999997654    


Q ss_pred             --ceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          203 --EMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       203 --~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                        .+++||||+++++|.+++..    +..+++..+..++.|++.                  ||+++.++.+||+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence              48999999999999998864    357999999999999986                  999999999999999998


Q ss_pred             hhhcccC---CCCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccC
Q 039021          259 MFYEQIH---PNQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQI  329 (464)
Q Consensus       259 ~~~~~~~---~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~  329 (464)
                      .......   ....|+..|+|||++..     ..++.++|||||||++|+|++|..||.... ............+....
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  240 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS  240 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCc
Confidence            7654322   23348999999998753     346789999999999999999999997654 22222222222222222


Q ss_pred             -CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          330 -SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       330 -~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                       ..+++++.+|+.+||..||++|||+.++++|-
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~  273 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLEHP  273 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence             33678999999999999999999999998763

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.6e-33  Score=269.10  Aligned_cols=229  Identities=19%  Similarity=0.254  Sum_probs=181.9

Q ss_pred             cccccccccccceeeeeEEeEEe------------------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCcee
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR------------------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNIL  192 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~------------------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv  192 (464)
                      .+|++.+.||+|+||.||++.+.                  +..||+|++....  .......+.+| .+++.++||||+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence            46889999999999999998643                  3368999987542  23445678889 999999999999


Q ss_pred             eeeceeeeCCceEEEEEecCCCChHHHHhhcc-----------CCCHHHHHHHHHHHHh------------------hhc
Q 039021          193 QFLGSIVLGEEMILITEYLPKGNLKGILSKKV-----------RLDLPTALRYALDIAR------------------NLL  243 (464)
Q Consensus       193 ~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------~l~~~~~~~~~~qi~~------------------Nil  243 (464)
                      ++++++...+..++||||+++|+|.+++....           .+++..+..++.|++.                  |||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil  162 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL  162 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence            99999999999999999999999999997532           3667789999999976                  999


Q ss_pred             ccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCCCCcc-ch
Q 039021          244 QDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE--GKHLQTNNSF-DF  315 (464)
Q Consensus       244 l~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~--g~~p~~~~~~-~~  315 (464)
                      +++++.+||+|||+++......     ....+++.|++||+.....++.++|||||||++|||++  |..||..... +.
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~  242 (296)
T cd05095         163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV  242 (296)
T ss_pred             EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHH
Confidence            9999999999999998654321     11224678999999888889999999999999999998  7789876552 21


Q ss_pred             hcccc-----ccCCCC-ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          316 MHLKS-----VNFEPK-FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       316 ~~~~~-----~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .....     ...... ..+..+++.+.+|+.+||+.||++||++.+|++.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         243 IENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11110     000111 112457899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.7e-33  Score=265.51  Aligned_cols=218  Identities=17%  Similarity=0.220  Sum_probs=173.0

Q ss_pred             cccccceeeeeEEeEEe--------------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          138 SMVEQGVFGESQTAKWR--------------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      +.||+|+||.||+|++.              ...|++|++...   .......+.+| .+++.++||||+++++++....
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            36899999999999852              235888887653   23344567788 9999999999999999999988


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCc-------eeEecch
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDH-------LKIGEYW  256 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~-------~kl~DFG  256 (464)
                      ..++||||+++|+|..++.. ...+++..++.++.||++                  |||++.++.       +|++|||
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            99999999999999998875 467999999999999987                  999987664       8999999


Q ss_pred             hhhhhcccCCCCcCCCCcccccccc-cCCCCCcccchhHHHHHHHHH-hCCCCCCCCccchhccccccCCCCccCCCCcH
Q 039021          257 VQMFYEQIHPNQENSQRNDNSSIAS-NVLDDTKKDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       257 ~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~el~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ++...... ....++..|+|||++. +..++.++|||||||++|||+ .|..||................ .. ....++
T Consensus       158 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~  234 (262)
T cd05077         158 IPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQC-ML-VTPSCK  234 (262)
T ss_pred             CCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCc-cC-CCCChH
Confidence            98765422 2334788999999887 467899999999999999998 5888887655222211111111 11 123568


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ++.+||.+||+.||++||++.+|+++|
T Consensus       235 ~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         235 ELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.2e-33  Score=266.55  Aligned_cols=217  Identities=19%  Similarity=0.230  Sum_probs=171.8

Q ss_pred             ccccceeeeeEEeEEe--------------------------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCce
Q 039021          139 MVEQGVFGESQTAKWR--------------------------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNI  191 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~--------------------------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnI  191 (464)
                      .||+|+||.||+|...                          ...|++|++...   .......+.+| .++++++||||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence            6999999999999752                          235889988753   23344567778 99999999999


Q ss_pred             eeeeceeeeCCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCC----
Q 039021          192 LQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGD----  248 (464)
Q Consensus       192 v~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~----  248 (464)
                      +++++++.+....++||||+++|+|..+++. .+.+++..+..++.||++                  |||+++.+    
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999999965 567899999999999986                  99997644    


Q ss_pred             ---ceeEecchhhhhhcccCCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHH-hCCCCCCCCccchhccccccC
Q 039021          249 ---HLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNF  323 (464)
Q Consensus       249 ---~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~-~g~~p~~~~~~~~~~~~~~~~  323 (464)
                         .+|++|||++...... ....++..|+|||++.+ ..++.++|||||||++|||+ +|+.||............. .
T Consensus       159 ~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~  236 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYE-K  236 (274)
T ss_pred             ccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHH-h
Confidence               3899999998654322 23347889999998876 56889999999999999995 6999998765222111111 1


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ....+ ...++.+.++|.+||+.+|++|||+.+|+++|
T Consensus       237 ~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         237 KHRLP-EPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             ccCCC-CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            11222 23467899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.1e-33  Score=272.36  Aligned_cols=228  Identities=18%  Similarity=0.240  Sum_probs=181.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|+++  ++.||+|.+.....  ......+.+| .++++++||||+++++++..++..++|||
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            6889999999999999999984  78999999875422  2223356678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |++ ++|.+++.. ...+++..+..++.|+++                  |||+++++.+||+|||+++......   ..
T Consensus        85 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (301)
T cd07873          85 YLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN  163 (301)
T ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence            997 599988865 457899999999999986                  9999999999999999998654322   22


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---------------------ccCC
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---------------------VNFE  324 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---------------------~~~~  324 (464)
                      ..+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+. +......                     ....
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T cd07873         164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY  243 (301)
T ss_pred             cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence            347899999998865 4578899999999999999999999986551 1110000                     0000


Q ss_pred             CCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          325 PKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       325 ~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +..       ....+++.+.+||.+||+.||.+|||+.++++|.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f  289 (301)
T cd07873         244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF  289 (301)
T ss_pred             CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            100       013468899999999999999999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-33  Score=281.99  Aligned_cols=225  Identities=13%  Similarity=0.142  Sum_probs=182.7

Q ss_pred             ccccccccccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      ..+|.+.+.||+|+||.||+|...    +..||+|.+...        ....+| ++|++++|||||++++++......+
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~  162 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC  162 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence            346999999999999999999863    567999988753        134568 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      +||||+. ++|.+++...+.+++.+++.++.||+.                  |||++.++.+||+|||+++......  
T Consensus       163 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~  241 (392)
T PHA03207        163 MVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT  241 (392)
T ss_pred             EEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccc
Confidence            9999996 599999977788999999999999986                  9999999999999999998665322  


Q ss_pred             ---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccc-------------------
Q 039021          266 ---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLK-------------------  319 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~-------------------  319 (464)
                         ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....    .+..+                   
T Consensus       242 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~  321 (392)
T PHA03207        242 PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL  321 (392)
T ss_pred             ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence               1335999999999999999999999999999999999999999764311    00000                   


Q ss_pred             -------cccCCCCccC------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          320 -------SVNFEPKFQI------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       320 -------~~~~~~~~~~------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                             ....++.+..      ..++.++.++|.+||..||++|||+.+++.|.+..
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~  379 (392)
T PHA03207        322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT  379 (392)
T ss_pred             HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence                   0000111111      23567889999999999999999999999997654

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=3.9e-33  Score=266.49  Aligned_cols=229  Identities=18%  Similarity=0.272  Sum_probs=191.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|...+.||+|+||.||+|.++  +..|++|++.....    ....+.+| +.+++++|+||+++++++...+..++|+
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            45888899999999999999985  88999999986422    45567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          209 EYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      ||+++++|.+++..+. .+++..+..++.|++.                  ||+++.++.+||+|||++.......   .
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  174 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN  174 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence            9999999999998876 8999999999999986                  9999999999999999987655322   2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccC-CCCcHHHHHHHHHHc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCT  344 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl  344 (464)
                      ...++..|++||++.+..++.++|||||||++|+|++|+.||..... ...........+.... ..++.++.++|.+||
T Consensus       175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  254 (286)
T cd06614         175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCL  254 (286)
T ss_pred             cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHh
Confidence            33478899999999888899999999999999999999999987652 2222222222222222 337899999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.+|.+|||+.+++.+.+..
T Consensus       255 ~~~p~~Rpt~~~il~~~~~~  274 (286)
T cd06614         255 VKDPEKRPSAEELLQHPFLK  274 (286)
T ss_pred             ccChhhCcCHHHHhhChHhh
Confidence            99999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=6.1e-34  Score=280.35  Aligned_cols=228  Identities=21%  Similarity=0.246  Sum_probs=187.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-C-----CceeeeeceeeeCCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-H-----PNILQFLGSIVLGEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-h-----pnIv~~~~~~~~~~~  203 (464)
                      +|.+.+.||+|.||.|.+|.+.  ++.||||+++..    .....+...| .+|..|+ |     -|+|+++++|...++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H  262 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH  262 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence            6899999999999999999984  889999999964    5556677778 9999886 4     389999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCC--ceeEecchhhhhh
Q 039021          204 MILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGD--HLKIGEYWVQMFY  261 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~--~~kl~DFG~a~~~  261 (464)
                      +|||+|.+.. +|+++|+.+  ..++...++.++.||+.                  ||||.+.+  .|||+|||.|.+.
T Consensus       263 lciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  263 LCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             eeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            9999999976 999999865  56899999999999986                  99997654  5999999999998


Q ss_pred             cccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc--------------------
Q 039021          262 EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS--------------------  320 (464)
Q Consensus       262 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~--------------------  320 (464)
                      .....+...+..|+|||++.+.+|+.+.|+||||||+.||++|.+.|++.+ .+.+..+.                    
T Consensus       342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kf  421 (586)
T KOG0667|consen  342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKF  421 (586)
T ss_pred             CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccccee
Confidence            877777779999999999999999999999999999999999998888765 11111100                    


Q ss_pred             --c-cC----------------------------CCCcc-C--------C-CCcHHHHHHHHHHcccCCCCCCCHHHHHH
Q 039021          321 --V-NF----------------------------EPKFQ-I--------S-RCPNRLKQLIAQCTNKDPSKRPTFAAVII  359 (464)
Q Consensus       321 --~-~~----------------------------~~~~~-~--------~-~~~~~~~~li~~cl~~dp~~Rpt~~~i~~  359 (464)
                        . ..                            ....+ .        . .-...+.+||++||..||.+|+|..+.++
T Consensus       422 f~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~  501 (586)
T KOG0667|consen  422 FTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN  501 (586)
T ss_pred             hhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence              0 00                            00000 0        0 11247899999999999999999999999


Q ss_pred             HHHHHH
Q 039021          360 TLEEVS  365 (464)
Q Consensus       360 ~l~~~~  365 (464)
                      |-+.-.
T Consensus       502 Hpfl~~  507 (586)
T KOG0667|consen  502 HPFLTG  507 (586)
T ss_pred             Cccccc
Confidence            976543

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.9e-33  Score=262.17  Aligned_cols=228  Identities=19%  Similarity=0.250  Sum_probs=192.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|++|.||+|++.  +..|++|.+.....  ......+.+| ..+++++||||+++++++..++..++|||
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence            5778899999999999999984  88999999886532  2445678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccCC---C
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIHP---N  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~~---~  267 (464)
                      |+++++|.+++.....+++..+..++.|+++                   ||+++.++.+||+|||++........   .
T Consensus        80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~  159 (264)
T cd06623          80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT  159 (264)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence            9999999999988788999999999999986                   99999999999999999987654332   2


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ..++..|+|||.+....++.++||||||+++|+|++|..||....    .+..........+..+...+++.+.+++.+|
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (264)
T cd06623         160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC  239 (264)
T ss_pred             eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHH
Confidence            348899999999998999999999999999999999999997763    2222222222233333232789999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |..+|++|||+.+++++-+
T Consensus       240 l~~~p~~R~~~~~ll~~~~  258 (264)
T cd06623         240 LQKDPKKRPSAAELLQHPF  258 (264)
T ss_pred             ccCChhhCCCHHHHHhCHH
Confidence            9999999999999998743

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.7e-33  Score=269.73  Aligned_cols=226  Identities=17%  Similarity=0.235  Sum_probs=184.8

Q ss_pred             cccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |.....||+|+||.||++..  ++..||+|.+...   .......+.+| .+++.++||||+++++.+..++..++||||
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~  100 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF  100 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence            44557899999999999987  4889999998753   23345567888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCc
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQE  269 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~  269 (464)
                      +++++|.+++.. +.+++.+++.++.||+.                  ||++++++.+||+|||++.......   ....
T Consensus       101 ~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~  179 (292)
T cd06658         101 LEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV  179 (292)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceee
Confidence            999999998854 47899999999999986                  9999999999999999997654322   2234


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHcccC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~d  347 (464)
                      |+..|+|||++.+..++.++||||||+++|||++|+.||.... ............+... ....++.+.+++.+||..|
T Consensus       180 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  259 (292)
T cd06658         180 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVRE  259 (292)
T ss_pred             cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCC
Confidence            8999999999988889999999999999999999999998765 2222222111122111 1346889999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEE  363 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~  363 (464)
                      |.+|||+.+++++-+.
T Consensus       260 P~~Rpt~~~il~~~~~  275 (292)
T cd06658         260 PSQRATAQELLQHPFL  275 (292)
T ss_pred             hhHCcCHHHHhhChhh
Confidence            9999999999988543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.4e-34  Score=278.31  Aligned_cols=230  Identities=17%  Similarity=0.172  Sum_probs=182.6

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~  202 (464)
                      .+|.+.+.||+|+||.||+|.+.  +..||+|.+...... ......+.+| .+|++++||||+++++++...      .
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            46999999999999999999974  789999999754221 2234456678 999999999999999988643      3


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..|++||++ +++|.++++. +.+++..+..++.||+.                  |||++.++.+||+|||+++.....
T Consensus        94 ~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~  171 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE  171 (343)
T ss_pred             cEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence            479999998 6799888764 47999999999999986                  999999999999999999887665


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc---------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV---------------------  321 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~---------------------  321 (464)
                      .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... +.......                     
T Consensus       172 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07878         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKY  251 (343)
T ss_pred             cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHH
Confidence            555679999999999877 5788999999999999999999999976541 11110000                     


Q ss_pred             -cCCCCcc-------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          322 -NFEPKFQ-------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       322 -~~~~~~~-------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                       ...+..+       ....++.+.+|+.+||..||++|||+.+++.|-+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~  302 (343)
T cd07878         252 IQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS  302 (343)
T ss_pred             hhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence             0000000       023567789999999999999999999999996644

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.1e-33  Score=278.80  Aligned_cols=228  Identities=16%  Similarity=0.134  Sum_probs=179.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~  202 (464)
                      .+|++.+.||+|+||.||++.+.  ++.||+|.+...... ......+.+| .+++.++||||+++++++...      .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            37899999999999999999874  889999999754322 3334566778 999999999999999988653      3


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..|+||||+++ +|.+.+..  .+++..+..++.|+++                  |||++.++.+||+|||+++.....
T Consensus        96 ~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~  172 (355)
T cd07874          96 DVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  172 (355)
T ss_pred             eeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence            47999999976 77777754  5889999999999986                  999999999999999999876543


Q ss_pred             C--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--------------------
Q 039021          265 H--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--------------------  321 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--------------------  321 (464)
                      .  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+... ........                    
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (355)
T cd07874         173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY  252 (355)
T ss_pred             cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHH
Confidence            2  234589999999999999999999999999999999999999986541 11000000                    


Q ss_pred             -cCCCC--------------c-----cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          322 -NFEPK--------------F-----QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       322 -~~~~~--------------~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                       ...+.              +     .....+.++.+||.+||+.||++|||+.|+++|.+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~  314 (355)
T cd07874         253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI  314 (355)
T ss_pred             HhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence             00000              0     001235678999999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.8e-33  Score=266.81  Aligned_cols=230  Identities=21%  Similarity=0.361  Sum_probs=186.6

Q ss_pred             cccccccccccceeeeeEEeEEe------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GE  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~  202 (464)
                      ..|++.+.||+|+||.||+|.+.      +..||+|++......  .....+.+| ++++.++||||+++++++..  ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence            35778899999999999999863      678999999865322  346678889 99999999999999999887  55


Q ss_pred             ceEEEEEecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ..++||||+++++|.+++.... .+++..+..++.|++.                  ||+++.++.+||+|||++.....
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            7899999999999999997643 6999999999999976                  99999999999999999987763


Q ss_pred             cCC------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhc----------------cccc
Q 039021          264 IHP------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMH----------------LKSV  321 (464)
Q Consensus       264 ~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~----------------~~~~  321 (464)
                      ...      ...++..|++||.+.+..++.++||||||+++|||++|..||.........                ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE  241 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence            221      123566799999998889999999999999999999999998654311110                1111


Q ss_pred             cCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       322 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ...... +..++.++.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       242 ~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         242 GERLPR-PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CCcCCC-CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            111111 245789999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.7e-34  Score=274.76  Aligned_cols=235  Identities=17%  Similarity=0.120  Sum_probs=182.3

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL  200 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~  200 (464)
                      ...+.+....|++++.||+||.++||++... .+-||+|.+.... .+.....-+++| ..|.+| .|.+||++|+|-..
T Consensus       353 ~~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~  431 (677)
T KOG0596|consen  353 NEIIKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT  431 (677)
T ss_pred             CeeEEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc
Confidence            3456666777999999999999999999974 5566766665432 346678889999 999999 58999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhccCC-CHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKKVRL-DLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~~~l-~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      ++.+||||||-+. ||.++|+++... +.-.++.|..|++.                  |.|+- .|.+||+|||+|..+
T Consensus       432 d~~lYmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  432 DGYLYMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAI  509 (677)
T ss_pred             CceEEEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence            9999999998765 999999876443 33477778888875                  77764 578999999999988


Q ss_pred             cccC-----CCCcCCCCcccccccccCC-----------CCCcccchhHHHHHHHHHhCCCCCCCCccchhcc--cc-cc
Q 039021          262 EQIH-----PNQENSQRNDNSSIASNVL-----------DDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL--KS-VN  322 (464)
Q Consensus       262 ~~~~-----~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~--~~-~~  322 (464)
                      ....     ...+||+.||+||-+....           .+.+|||||+|||||+|+.|+.||......+...  +. .+
T Consensus       510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~  589 (677)
T KOG0596|consen  510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPN  589 (677)
T ss_pred             CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCC
Confidence            7543     3455999999999876443           3578999999999999999999998765222222  21 11


Q ss_pred             CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       323 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ...+|+...-+.++.++|+.||+.||.+|||+.++|+|.
T Consensus       590 ~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp  628 (677)
T KOG0596|consen  590 HEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP  628 (677)
T ss_pred             ccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence            223444322234599999999999999999999999873

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=9.8e-34  Score=270.45  Aligned_cols=228  Identities=18%  Similarity=0.244  Sum_probs=182.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.++  ++.||+|.+....... .....+.+| ++++.++||||+++++++..++..++|||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            5788899999999999999984  7899999987643322 334567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++++|..+......+++..++.++.|+++                  ||++++++.+||+|||+++......   ...
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            9999999888877667999999999999986                  9999999999999999988764322   123


Q ss_pred             cCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------ccC-CC
Q 039021          269 ENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------VNF-EP  325 (464)
Q Consensus       269 ~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~~~-~~  325 (464)
                      .++..|+|||++.+ ..++.++||||||+++|||++|+.||..... +......                    ... .+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence            47889999999875 4578899999999999999999999975441 1000000                    000 00


Q ss_pred             Cc--------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          326 KF--------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       326 ~~--------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ..        ..+.++..+.+|+.+||..+|++||++.++++|-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~  284 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE  284 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence            00        0135688999999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.1e-33  Score=263.63  Aligned_cols=227  Identities=20%  Similarity=0.291  Sum_probs=185.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||++.++  |..||+|.+...... ......+.+| .+++.++||||+++++.+...+..++|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence            4778899999999999999984  789999998764322 2334567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccCC--
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~~--  266 (464)
                      |+++++|.+++...  ..+++..+..++.|++.                  ||++++++ .+||+|||.+........  
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~  159 (257)
T cd08225          80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA  159 (257)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence            99999999999654  35789999999999976                  99998886 479999999987654321  


Q ss_pred             -CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          267 -NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       267 -~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                       ...|++.|+|||+..+..++.++|+||||+++|+|++|..||.... ............... .+.++.++.+++.+||
T Consensus       160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l  238 (257)
T cd08225         160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPI-SPNFSRDLRSLISQLF  238 (257)
T ss_pred             cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCC-CCCCCHHHHHHHHHHh
Confidence             2248999999999988889999999999999999999999998765 222222222222222 2457899999999999


Q ss_pred             ccCCCCCCCHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITL  361 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l  361 (464)
                      ..+|++|||+.+++++.
T Consensus       239 ~~~p~~Rpt~~~ll~~~  255 (257)
T cd08225         239 KVSPRDRPSITSILKRP  255 (257)
T ss_pred             ccChhhCcCHHHHhhCC
Confidence            99999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.4e-33  Score=265.97  Aligned_cols=224  Identities=19%  Similarity=0.289  Sum_probs=184.1

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |...+.||+|++|.||++.+.  ++.|++|.+...   .......+.+| .+++.++||||+++++++...+..++|+||
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence            445579999999999999874  789999998642   22334557788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCc
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQE  269 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~  269 (464)
                      +++++|.+++.. .++++.++..++.|++.                  ||+++.++.+||+|||++.......   ....
T Consensus        98 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  176 (285)
T cd06648          98 LEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV  176 (285)
T ss_pred             cCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence            999999999987 57999999999999986                  9999999999999999987665332   2234


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHcccC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~d  347 (464)
                      |++.|+|||++.+..++.++|||||||++|+|++|..||...+ ............+... ...+++.+.+++.+||..+
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  256 (285)
T cd06648         177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRD  256 (285)
T ss_pred             CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccC
Confidence            8999999999988889999999999999999999999997765 2222222222122221 1337899999999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039021          348 PSKRPTFAAVIITL  361 (464)
Q Consensus       348 p~~Rpt~~~i~~~l  361 (464)
                      |++|||+.++++|-
T Consensus       257 p~~Rpt~~~il~~~  270 (285)
T cd06648         257 PAQRATAAELLNHP  270 (285)
T ss_pred             hhhCcCHHHHccCc
Confidence            99999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=3.2e-33  Score=272.28  Aligned_cols=227  Identities=13%  Similarity=0.189  Sum_probs=178.0

Q ss_pred             cccccccc--eeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          136 HSSMVEQG--VFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       136 ~~~~lg~G--~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +++.||+|  +|++||++.++  |+.||+|.+...... ......+.+| ++++.++||||+++++++..++..++||||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            46789999  78999999984  889999999864332 3345567778 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc------
Q 039021          211 LPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI------  264 (464)
Q Consensus       211 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~------  264 (464)
                      +++|+|.+++..+  ..+++..+..++.|++.                  |||++.++.+|++|||.+......      
T Consensus        81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (327)
T cd08227          81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV  160 (327)
T ss_pred             cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence            9999999999653  46899999999999986                  999999999999999875543211      


Q ss_pred             ----CCCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCC-------------
Q 039021          265 ----HPNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFE-------------  324 (464)
Q Consensus       265 ----~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~-------------  324 (464)
                          .....++..|+|||++.+  ..++.++|||||||++|||++|+.||..... ...........             
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (327)
T cd08227         161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE  240 (327)
T ss_pred             cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence                112236788999999976  4689999999999999999999999975431 10000000000             


Q ss_pred             ------------------------CCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          325 ------------------------PKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       325 ------------------------~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                              +..       ....+++++.+|+.+||+.||++|||++++++|.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f  310 (327)
T cd08227         241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  310 (327)
T ss_pred             cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence                                    000       012356789999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=5.3e-33  Score=263.07  Aligned_cols=221  Identities=21%  Similarity=0.253  Sum_probs=170.9

Q ss_pred             cccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          138 SMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      +.||+|+||+||+|...    ...+++|.+....  .......+.+| .+++.++||||+++++.+.+.+.+++||||++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP   78 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence            36999999999999753    3467888776432  23445567788 99999999999999999999999999999999


Q ss_pred             CCChHHHHhhc-----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----
Q 039021          213 KGNLKGILSKK-----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----  264 (464)
Q Consensus       213 ~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----  264 (464)
                      +|+|.+++...     ...++..++.++.||++                  |||+++++.+||+|||+++.....     
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            99999999753     23467778889999976                  999999999999999998754321     


Q ss_pred             CCCCcCCCCccccccccc-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCc----cCCC
Q 039021          265 HPNQENSQRNDNSSIASN-------VLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKF----QISR  331 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~----~~~~  331 (464)
                      .....+++.|+|||++..       ..++.++|||||||++|||++ |..||.... .+.............    ....
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLK  238 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccccc
Confidence            122236778999998743       456789999999999999999 888997765 222222222222111    1245


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +++.+.+++..|| .||++|||+++|++.|
T Consensus       239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         239 YSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             CCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            7889999999999 5999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-34  Score=286.62  Aligned_cols=236  Identities=19%  Similarity=0.291  Sum_probs=199.4

Q ss_pred             cccccccccccccceeeeeEEeEE--e----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKW--R----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~--~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      .|...+..++||+|+||+||+|.|  +    .-+||+|++....  ..+...++.+| -+|.+++|||+++++++|....
T Consensus       694 kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~  771 (1177)
T KOG1025|consen  694 KETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST  771 (1177)
T ss_pred             hhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch
Confidence            344566778999999999999999  2    4589999998652  24445678888 9999999999999999998766


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                       +.||++|+++|.|.+|++. +..+-.+..+.|+.|||+                  |+|+.+-.++||.|||+|+.+..
T Consensus       772 -~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  772 -LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             -HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence             8899999999999999986 578999999999999987                  99999999999999999998875


Q ss_pred             cCCCC-----cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHH
Q 039021          264 IHPNQ-----ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       264 ~~~~~-----~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      .....     .-.+.|||-|.+....|+.++|||||||++||++| |..||.+.. .++......+.+.. +++.++-.+
T Consensus       851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLs-qPpiCtiDV  929 (1177)
T KOG1025|consen  851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLS-QPPICTIDV  929 (1177)
T ss_pred             ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCC-CCCCccHHH
Confidence            43222     14568999999999999999999999999999999 999999988 44444455555533 457799999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      +.+|.+||..|++.||+|+++...+.++.+...
T Consensus       930 y~~mvkCwmid~~~rp~fkel~~~fs~~ardpq  962 (1177)
T KOG1025|consen  930 YMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ  962 (1177)
T ss_pred             HHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence            999999999999999999999999888765443

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.9e-33  Score=277.98  Aligned_cols=228  Identities=15%  Similarity=0.118  Sum_probs=179.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~  202 (464)
                      .+|.+.+.||+|+||.||+|.+.  ++.||+|++...... ......+.+| .+++.++||||+++++++...      .
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            47999999999999999999984  889999999754322 2334566778 999999999999999988643      3


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+|+||||+++ +|.+.+..  .+++..+..++.|+++                  |||++.++.+||+|||+++.....
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  179 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  179 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence            57999999975 78777754  5889999999999986                  999999999999999999876543


Q ss_pred             C--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--------------------
Q 039021          265 H--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--------------------  321 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--------------------  321 (464)
                      .  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+ .........                    
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (364)
T cd07875         180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY  259 (364)
T ss_pred             CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHH
Confidence            2  23458999999999999999999999999999999999999998654 111111000                    


Q ss_pred             -cCCCCcc-------------------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          322 -NFEPKFQ-------------------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       322 -~~~~~~~-------------------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                       ...+.+.                   ....+.++.+||.+||+.||.+|||+.++++|.+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~  321 (364)
T cd07875         260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI  321 (364)
T ss_pred             HhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence             0000000                   01134678999999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.2e-33  Score=267.85  Aligned_cols=226  Identities=20%  Similarity=0.233  Sum_probs=178.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|+++  +..||+|.++..... ......+.+| .++++++||||+++++++.+++.+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE   79 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence            4778899999999999999984  889999998754221 2233567778 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc---cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          210 YLPKGNLKGILSKK---VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |++ ++|.+++...   ..+++..++.++.|+++                  ||+++.++.+||+|||++.......   
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  158 (285)
T cd07861          80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY  158 (285)
T ss_pred             cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence            998 5898888542   56899999999999987                  9999999999999999997654221   


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc-c----------------ccCC--
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK-S----------------VNFE--  324 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~-~----------------~~~~--  324 (464)
                      ....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+... ...... .                ....  
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence            22347899999998865 4578899999999999999999999976541 100000 0                0000  


Q ss_pred             --------CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          325 --------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       325 --------~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                              .......+++++.++|.+||+.||++|||+.+|+.|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                    000113478999999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=9.2e-34  Score=266.64  Aligned_cols=218  Identities=21%  Similarity=0.220  Sum_probs=172.9

Q ss_pred             cccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          138 SMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +.||+|+||.||+|.++         ...|++|.+...   .....+.+.+| .+++.++||||+++++++..++..++|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            36999999999999874         234788887642   23445567778 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCc--------eeEecchhhhh
Q 039021          208 TEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDH--------LKIGEYWVQMF  260 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~--------~kl~DFG~a~~  260 (464)
                      |||+++|+|.++++.+ ..+++..++.++.||+.                  ||+++.++.        +|++|||++..
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            9999999999999764 46899999999999986                  999987664        69999999876


Q ss_pred             hcccCCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhC-CCCCCCCccchhccccccCCCCccCCCCcHHHHH
Q 039021          261 YEQIHPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEG-KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       261 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      .... ....+++.|+|||++.+ ..++.++|||||||++|+|++| ..||............. .....+ ...+.++.+
T Consensus       158 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~  234 (258)
T cd05078         158 VLPK-EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-DRHQLP-APKWTELAN  234 (258)
T ss_pred             cCCc-hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-ccccCC-CCCcHHHHH
Confidence            5432 23458899999999987 4578999999999999999998 46666554222111111 122222 346689999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      |+.+||+.||++|||+++|++.|
T Consensus       235 li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         235 LINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHhccChhhCCCHHHHHHhc
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=8.4e-33  Score=264.81  Aligned_cols=228  Identities=15%  Similarity=0.188  Sum_probs=181.1

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeC----
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLG----  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~----  201 (464)
                      ...+|.+.+.||+|+||.||++...  ++.+|+|++....    .....+.+| .+++++ +||||+++++++...    
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~   95 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV   95 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence            3457899999999999999999983  8899999987532    223456677 888888 899999999998754    


Q ss_pred             -CceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          202 -EEMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                       +..++||||+++|+|.++++.    ...+++..++.++.|++.                  ||++++++.+||+|||++
T Consensus        96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~  175 (291)
T cd06639          96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS  175 (291)
T ss_pred             CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence             358999999999999998853    357899999999999986                  999999999999999999


Q ss_pred             hhhcccC---CCCcCCCCcccccccccC-----CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc-c
Q 039021          259 MFYEQIH---PNQENSQRNDNSSIASNV-----LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF-Q  328 (464)
Q Consensus       259 ~~~~~~~---~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~  328 (464)
                      .......   ....|+..|+|||++...     .++.++|||||||++|||++|+.||..... ...........+.. .
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  255 (291)
T cd06639         176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLH  255 (291)
T ss_pred             hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCc
Confidence            8765322   234588999999987543     367899999999999999999999987652 22222222212221 1


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +..++..+.++|.+||+.+|++||++.++++|-
T Consensus       256 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~  288 (291)
T cd06639         256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP  288 (291)
T ss_pred             ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence            234678899999999999999999999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-33  Score=260.59  Aligned_cols=229  Identities=18%  Similarity=0.222  Sum_probs=186.1

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccC--CchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--Cce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHI--YHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~  204 (464)
                      .+|++.+.||+|+||.||+|.+  .+..||+|.+....  .........+.+| +++++++||||+++++++.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            3688899999999999999997  38899999986421  1223455678889 999999999999999998764  458


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--  264 (464)
                      ++||||+++++|.+++...+.+++..+..++.|++.                  ||+++.++.+||+|||+++.....  
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            899999999999999988778999999999999986                  999999999999999999865421  


Q ss_pred             ----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHH
Q 039021          265 ----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       265 ----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                          .....|+..|+|||++.+..++.++|||||||++|+|++|+.||.... ................+..+++++.++
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  241 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDF  241 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHH
Confidence                112348899999999998889999999999999999999999998765 222222222212222236688999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+||. +|..||++.+++.|.
T Consensus       242 i~~~l~-~~~~r~~~~~~~~~~  262 (264)
T cd06653         242 LKQIFV-EEKRRPTAEFLLRHP  262 (264)
T ss_pred             HHHHhc-CcccCccHHHHhcCC
Confidence            999999 579999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-35  Score=299.24  Aligned_cols=234  Identities=17%  Similarity=0.128  Sum_probs=193.8

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|.+.+.||+|+||+|.+++.+  ++.||+|++++...........|++| .+|.--+.+-|++++-.|+++.++|+
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            3447999999999999999999985  78999999987543334455679999 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||||++||||-.++.+..++++.-++.|+..|+-                  |||||..|++||+|||.+-......   
T Consensus       153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~  232 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR  232 (1317)
T ss_pred             EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence            9999999999999998889999999999998864                  9999999999999999987766322   


Q ss_pred             -CCCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcccccc--CCCCcc-CCCCcHHH
Q 039021          266 -PNQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN--FEPKFQ-ISRCPNRL  336 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~  336 (464)
                       ....|||.|.+||++..     +.|+..+|+||+||++|||+.|..||...+....+-++.+  ....|| ...+|+++
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeea  312 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEA  312 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHH
Confidence             23349999999999853     5688999999999999999999999988772222222211  133333 24589999


Q ss_pred             HHHHHHHcccCCCCCCC---HHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPT---FAAVIITLEEV  364 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt---~~~i~~~l~~~  364 (464)
                      ++||.+.+ -+|+.|..   +.++..|....
T Consensus       313 kdLI~~ll-~~~e~RLgrngiedik~HpFF~  342 (1317)
T KOG0612|consen  313 KDLIEALL-CDREVRLGRNGIEDIKNHPFFE  342 (1317)
T ss_pred             HHHHHHHh-cChhhhcccccHHHHHhCcccc
Confidence            99999998 46889987   99999986543

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.8e-33  Score=264.54  Aligned_cols=229  Identities=15%  Similarity=0.193  Sum_probs=183.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv  207 (464)
                      +|...+.||.|++|.||++.+.  ++.||+|.+.....  ......+.+| +++++++||||++++++|.+.  +.+++|
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence            5777899999999999999983  78999999985422  2445667888 999999999999999988653  468999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||+++++|.+++..    ...+++..+..++.|++.                  ||+++.++.+||+|||++.......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  159 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL  159 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence            999999999988753    356889999999999976                  9999999999999999987654322


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc------cchhccccccCCCCccC-----CCCc
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS------FDFMHLKSVNFEPKFQI-----SRCP  333 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~-----~~~~  333 (464)
                       ....++..|+|||.+.+..++.++|||||||++|+|++|..||....      .+..........+....     ..++
T Consensus       160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd06621         160 AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWS  239 (287)
T ss_pred             cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchH
Confidence             23458889999999999999999999999999999999999998652      11122111111111110     2357


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +.+.+++.+||..+|++|||+.|++.|-+.
T Consensus       240 ~~~~~li~~~l~~~p~~Rpt~~eil~~~~~  269 (287)
T cd06621         240 EEFKDFIKQCLEKDPTRRPTPWDMLEHPWI  269 (287)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence            899999999999999999999999998654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.3e-33  Score=266.80  Aligned_cols=227  Identities=21%  Similarity=0.248  Sum_probs=190.3

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|.+.+.||+|+||.||+|.+  .+..||+|++.............+.+| .++++++ ||||+++++++..++..++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            688889999999999999998  488999999986544444445677888 9999998 999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----  266 (464)
                      ||+++++|.+++.+.+.+++..++.++.|++.                  ||+++.++.++|+|||++........    
T Consensus        82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~  161 (280)
T cd05581          82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN  161 (280)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccC
Confidence            99999999999988888999999999999986                  99999999999999999987653221    


Q ss_pred             -------------------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCC
Q 039021          267 -------------------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPK  326 (464)
Q Consensus       267 -------------------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~  326 (464)
                                         ...++..|+|||+.....++.++||||||+++|++++|..||..... ....... .....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~  240 (280)
T cd05581         162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL-KLEYS  240 (280)
T ss_pred             CCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-hcCCC
Confidence                               12378899999999888899999999999999999999999987662 2111111 11222


Q ss_pred             ccCCCCcHHHHHHHHHHcccCCCCCCCH----HHHHHHH
Q 039021          327 FQISRCPNRLKQLIAQCTNKDPSKRPTF----AAVIITL  361 (464)
Q Consensus       327 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~----~~i~~~l  361 (464)
                      ++ ..+++.+.+++.+||..+|++|||+    .+++.|.
T Consensus       241 ~~-~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~  278 (280)
T cd05581         241 FP-PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHP  278 (280)
T ss_pred             CC-CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCC
Confidence            22 4578999999999999999999999    8888763

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=7.5e-33  Score=264.73  Aligned_cols=228  Identities=17%  Similarity=0.199  Sum_probs=180.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|...+.||+|+||.||++.++  ++.||+|.+.....  ......+.+| .++.++. ||||+++++++..++..+++|
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            5667789999999999999984  78999999876432  2344567778 8888885 999999999999999999999


Q ss_pred             EecCCCChHHHH---h--hccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc
Q 039021          209 EYLPKGNLKGIL---S--KKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       209 E~~~~g~L~~~l---~--~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ||+.. +|.++.   .  ..+.+++..+..++.|++.                   ||+++.++.+||+|||+++.....
T Consensus        83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            99875 655433   2  2367999999999998875                   999999999999999999876543


Q ss_pred             C--CCCcCCCCcccccccccC---CCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC---CCCcH
Q 039021          265 H--PNQENSQRNDNSSIASNV---LDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI---SRCPN  334 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~---~~~~~  334 (464)
                      .  ....|++.|+|||++...   .++.++|||||||++|+|++|+.||....  .+..........+....   ..+++
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd06616         162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSP  241 (288)
T ss_pred             CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCH
Confidence            2  233589999999998765   68899999999999999999999997654  12222222222222222   24789


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ++.+|+.+||+.+|++|||+.+|+.+-+.
T Consensus       242 ~l~~li~~~l~~~p~~Rpt~~~i~~~~~~  270 (288)
T cd06616         242 SFVNFINLCLIKDESKRPKYKELLEHPFI  270 (288)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence            99999999999999999999999998553

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.6e-33  Score=268.83  Aligned_cols=227  Identities=17%  Similarity=0.222  Sum_probs=178.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  |..||+|.++.... .......+.+| .++++++||||+++++++.+.+.+++|+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence            4778899999999999999984  88999999975422 12233456678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+.+ +|.+++.. .+.+++..++.++.||++                  ||+++.++.+||+|||+++......   ..
T Consensus        80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (284)
T cd07839          80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA  158 (284)
T ss_pred             cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence            9975 88888764 567999999999999986                  9999999999999999998665322   22


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCC-Cccc-hhcccc-------------------ccCCC
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTN-NSFD-FMHLKS-------------------VNFEP  325 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~-~~~~-~~~~~~-------------------~~~~~  325 (464)
                      ..+++.|+|||++.+ ..++.++|||||||++|+|++|..||.. .+.. ......                   ....+
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence            347899999999876 4578999999999999999999888643 2211 100000                   00000


Q ss_pred             Ccc--------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          326 KFQ--------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       326 ~~~--------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .++        .+.+++++.+||.+||+.||.+|||+.+++.|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~  282 (284)
T cd07839         239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP  282 (284)
T ss_pred             CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence            000        134688999999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.1e-32  Score=257.50  Aligned_cols=225  Identities=20%  Similarity=0.299  Sum_probs=189.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||++.++  +..|++|++.....   .....+.+| +.+++++||||+++++++..+...++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence            3677899999999999999985  88999999986422   345678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~  268 (464)
                      |+++++|.+++... ..+++..+..++.|++.                  ||++++++.+||+|||.+.......  ...
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  157 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTM  157 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccce
Confidence            99999999999775 68999999999999986                  9999999999999999998876543  445


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccC-CCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~  346 (464)
                      .++..|++||++.+..++.++||||||+++|+|++|..||.... ............+..+. ..++..+.+++.+||+.
T Consensus       158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  237 (253)
T cd05122         158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQK  237 (253)
T ss_pred             ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccC
Confidence            58999999999988889999999999999999999999998764 22222222222222222 22489999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 039021          347 DPSKRPTFAAVIIT  360 (464)
Q Consensus       347 dp~~Rpt~~~i~~~  360 (464)
                      ||++|||+.+++.|
T Consensus       238 ~p~~R~t~~~~l~~  251 (253)
T cd05122         238 NPEKRPTAEQLLKH  251 (253)
T ss_pred             ChhhCCCHHHHhcC
Confidence            99999999999876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-35  Score=306.26  Aligned_cols=226  Identities=19%  Similarity=0.261  Sum_probs=196.9

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +..-+..||.|.||.||.|..  +|.-.|+|-++..... ........+| .++..++|||+|++||+-.+.+.++|.||
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence            455678999999999999997  5888999998865433 4555667888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-----
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-----  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-----  266 (464)
                      ||++|+|.+.+...+..++.....|..|++.                  ||+|+.+|.+|++|||.|..+.....     
T Consensus      1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred             HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence            9999999999988777888888888889876                  99999999999999999998875432     


Q ss_pred             --CCcCCCCcccccccccC---CCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcHHHHHH
Q 039021          267 --NQENSQRNDNSSIASNV---LDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       267 --~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                        ...||+.|||||++.+.   ....++||||+||+..||+||+.||...+  .+++..+..+..|.+|.. ++++-.+|
T Consensus      1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~-ls~~g~dF 1473 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER-LSSEGRDF 1473 (1509)
T ss_pred             HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh-hhHhHHHH
Confidence              23399999999999763   45578999999999999999999998876  677888888888888744 99999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      |.+||+.||.+|.++.||++|
T Consensus      1474 le~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1474 LEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HHHHHhcCchhhhHHHHHHHh
Confidence            999999999999999999887

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.9e-32  Score=256.94  Aligned_cols=227  Identities=19%  Similarity=0.271  Sum_probs=191.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv  207 (464)
                      +|...+.||+|++|.||+|.++  +..|++|++...... ....+.+.+| .++++++||||+++++.+.+.  ...++|
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence            3667789999999999999985  889999999865322 3456778889 999999999999999999988  889999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      |||+++++|.+++.....+++..+..++.|+++                  ||+++.++.+||+|||.+.......    
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  159 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG  159 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence            999999999999988779999999999999986                  9999999999999999998776543    


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccc-cCCCCccCCCCcHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSV-NFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~li~  341 (464)
                       ....++..|++||.+.+..++.++||||||+++|+|++|..||....  ......... ...+.. +..++..+.+++.
T Consensus       160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~  238 (260)
T cd06606         160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEI-PEHLSEEAKDFLR  238 (260)
T ss_pred             ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCC-CcccCHHHHHHHH
Confidence             33458999999999988889999999999999999999999998765  222222211 122222 2556899999999


Q ss_pred             HHcccCCCCCCCHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +||..+|++||++.+++.|-
T Consensus       239 ~~l~~~p~~Rp~~~~ll~~~  258 (260)
T cd06606         239 KCLRRDPKKRPTADELLQHP  258 (260)
T ss_pred             HhCcCChhhCCCHHHHhhCC
Confidence            99999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-33  Score=266.58  Aligned_cols=227  Identities=18%  Similarity=0.213  Sum_probs=183.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.++  ++.||+|.++.... .......+.+| +++++++||||+++++++..++..++|||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            5888899999999999999984  78999999875432 23344678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~~  267 (464)
                      |++++.+..+......+++.++..++.|++.                  ||++++++.+||+|||++.......    ..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            9998777777766677999999999999987                  9999999999999999998776433    23


Q ss_pred             CcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------cc-CC
Q 039021          268 QENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------VN-FE  324 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~~-~~  324 (464)
                      ..++..|+|||++.+. .++.++||||||+++|+|++|+.||..... +......                    .. ..
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            3478899999999887 889999999999999999999999976431 1000000                    00 00


Q ss_pred             CC---------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          325 PK---------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       325 ~~---------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      +.         ..+..+++++.+||++||..+|++|||+++++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            00         0112358899999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=8.7e-33  Score=266.95  Aligned_cols=232  Identities=19%  Similarity=0.180  Sum_probs=188.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +..|...+.||+|+||.||+|++.  +..||+|.+.............+.+| ++++.++|||++++++++......++|
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   93 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence            335778899999999999999984  78899999875433334445667788 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCC
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQ  268 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~  268 (464)
                      |||+. |+|.+++.. ..++++.++..++.|++.                  ||+++.++.+||+|||++...... ...
T Consensus        94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-~~~  171 (308)
T cd06634          94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NXF  171 (308)
T ss_pred             EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-ccc
Confidence            99997 588877753 457899999999999975                  999999999999999998765432 344


Q ss_pred             cCCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          269 ENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       269 ~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      .+++.|+|||++.   ...++.++|||||||++|+|++|..||.... ............+......++..+.+||.+||
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  251 (308)
T cd06634         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL  251 (308)
T ss_pred             cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHh
Confidence            5889999999874   3567889999999999999999999997755 22223233333344444568899999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ..+|++||++.+++.+.+..
T Consensus       252 ~~~P~~Rp~~~~ll~~~~~~  271 (308)
T cd06634         252 QKIPQDRPTSEVLLKHRFVL  271 (308)
T ss_pred             hCCcccCCCHHHHhhCcccc
Confidence            99999999999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.5e-32  Score=265.86  Aligned_cols=227  Identities=17%  Similarity=0.172  Sum_probs=185.1

Q ss_pred             cccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |...+.||+|+||.||+|++  .+..|++|.+.............+.+| ++++.++||||+++++++.+....++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            66667899999999999997  488999999986544444555677888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      +. |+|.+++.. ..++++.+++.++.|++.                  ||+++.++.+||+|||++..... .....|+
T Consensus       103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-~~~~~~~  180 (313)
T cd06633         103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-ANSFVGT  180 (313)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-CCCcccc
Confidence            96 488877754 467899999999999976                  99999999999999999865432 2344589


Q ss_pred             CCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          272 QRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       272 ~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..|+|||++.   ...++.++|||||||++|+|++|..||.... ............+......++..+.+|+.+||+.+
T Consensus       181 ~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  260 (313)
T cd06633         181 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKI  260 (313)
T ss_pred             ccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCC
Confidence            9999999984   4568889999999999999999999997765 23222222223333333557889999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLE  362 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~  362 (464)
                      |.+||++.+++.|-+
T Consensus       261 P~~Rp~~~~~l~~~~  275 (313)
T cd06633         261 PQERPASAELLRHDF  275 (313)
T ss_pred             hhhCcCHHHHhcCcc
Confidence            999999999998743

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.4e-33  Score=273.77  Aligned_cols=223  Identities=17%  Similarity=0.188  Sum_probs=175.4

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||+|++.  +..||+|+....         ....| .++++++||||+++++++...+..++
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence            3347999999999999999999985  678999986542         22457 89999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--C
Q 039021          207 ITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--H  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~  265 (464)
                      ||||+. |+|.+++.. ...+++..++.++.||+.                  |||++.++.+||+|||+++.....  .
T Consensus       135 v~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  213 (357)
T PHA03209        135 VLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF  213 (357)
T ss_pred             EEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence            999996 588888865 467999999999999986                  999999999999999999864322  2


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC-CCCCccc-----------hhcccc--ccCCCCc----
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL-QTNNSFD-----------FMHLKS--VNFEPKF----  327 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p-~~~~~~~-----------~~~~~~--~~~~~~~----  327 (464)
                      ....||+.|+|||++.+..++.++|||||||++|||+++..| |......           ......  ...+..+    
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  293 (357)
T PHA03209        214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP  293 (357)
T ss_pred             ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence            334599999999999999999999999999999999985544 3332100           000000  0000000    


Q ss_pred             -------------------------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 -------------------------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 -------------------------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                               ....++..+.+||.+||+.||++|||+.|+++|-+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~  353 (357)
T PHA03209        294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPM  353 (357)
T ss_pred             ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCch
Confidence                                     01235677888999999999999999999999854

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=6.2e-33  Score=266.61  Aligned_cols=229  Identities=19%  Similarity=0.198  Sum_probs=182.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc--hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH--PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~--~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +|++.+.||+|+||.||+|.++  ++.||+|.+......  .......+..| +++++++||||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            3677889999999999999984  789999999865432  12234456678 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          208 TEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |||+ +|+|.+++.... .+++..+..++.||++                  ||+++.++.+||+|||+++......   
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence            9999 889999998765 7999999999999986                  9999999999999999998765432   


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc----------------------c
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS----------------------V  321 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~----------------------~  321 (464)
                      ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||..... .......                      .
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T cd07841         160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF  239 (298)
T ss_pred             cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence            22337888999998855 5678999999999999999999887765441 1110000                      0


Q ss_pred             cCCCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          322 NFEPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       322 ~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ...+..+    ....+.++.++|.+||+.||++|||+.+++.|-+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~  284 (298)
T cd07841         240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY  284 (298)
T ss_pred             cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence            0000000    1335788999999999999999999999998744

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=8.2e-33  Score=260.55  Aligned_cols=221  Identities=20%  Similarity=0.226  Sum_probs=182.7

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|+||.||++.+.  |+.|++|++.............+.+| +++++++||||+++++.+..+...|+||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999985  88999999986544344556778888 999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----------CC
Q 039021          217 KGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----------PN  267 (464)
Q Consensus       217 ~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----------~~  267 (464)
                      .+++.+.+.+++..+..++.|++.                  ||++++++.+||+|||++.......           ..
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            999988778999999999999986                  9999999999999999988654321           12


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccC-CCCcHHHHHHHHHHccc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~  346 (464)
                      ..++..|++||+.....++.++||||||+++|+|++|..||..................++. ..+++.+.+++.+||+.
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  240 (265)
T cd05579         161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVP  240 (265)
T ss_pred             cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcC
Confidence            34788999999998888999999999999999999999999876633222222111222221 22489999999999999


Q ss_pred             CCCCCCCH---HHHHHH
Q 039021          347 DPSKRPTF---AAVIIT  360 (464)
Q Consensus       347 dp~~Rpt~---~~i~~~  360 (464)
                      +|++|||+   .+++++
T Consensus       241 ~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         241 DPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             CHhhcCCCccHHHHhcC
Confidence            99999999   666655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.6e-32  Score=260.20  Aligned_cols=229  Identities=18%  Similarity=0.303  Sum_probs=183.2

Q ss_pred             cccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-----
Q 039021          134 TLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-----  202 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-----  202 (464)
                      |++.+.||+|+||.||+|.++     +..||+|++..+.... ...+.+.+| +++++++||||+++++++....     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence            567789999999999999863     5789999998654333 345667888 9999999999999999887532     


Q ss_pred             -ceEEEEEecCCCChHHHHhhc------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          203 -EMILITEYLPKGNLKGILSKK------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       203 -~~~lv~E~~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                       ..++++||+.+|+|.+++...      ..+++..++.++.|++.                  ||+++.++.+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074          80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence             247899999999999887431      25788999999999986                  99999999999999999


Q ss_pred             hhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCC
Q 039021          258 QMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQIS  330 (464)
Q Consensus       258 a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~  330 (464)
                      ++......     ....+++.|++||.+....++.++|||||||++|+|++ |+.||..... ..............+ .
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~  238 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP-P  238 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCC-C
Confidence            98664321     12235678999999998889999999999999999999 8999977652 222222222222222 4


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+++.+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       239 ~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         239 DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5789999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-32  Score=256.30  Aligned_cols=226  Identities=21%  Similarity=0.304  Sum_probs=190.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||++++.  ++.|++|.+...... ......+.+| +++++++||||+++++++.+.+..++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence            4778899999999999999884  789999999875432 2455678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC---CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP---NQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~---~~  268 (464)
                      |+++++|.+++.....+++..+..++.|++.                  ||+++.++.+||+|||++........   ..
T Consensus        80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (254)
T cd06627          80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV  159 (254)
T ss_pred             cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence            9999999999988789999999999999986                  99999999999999999988765433   34


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .++..|+|||...+..++.++||||||+++|+|++|..||..... ...........+.+ +..+++.+.+++.+||..+
T Consensus       160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~  238 (254)
T cd06627         160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPL-PEGISPELKDFLMQCFQKD  238 (254)
T ss_pred             ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCC-CCCCCHHHHHHHHHHHhCC
Confidence            589999999999888889999999999999999999999976552 22222222222333 2567899999999999999


Q ss_pred             CCCCCCHHHHHHH
Q 039021          348 PSKRPTFAAVIIT  360 (464)
Q Consensus       348 p~~Rpt~~~i~~~  360 (464)
                      |++|||+.+++.+
T Consensus       239 p~~R~~~~~~l~~  251 (254)
T cd06627         239 PNLRPTAKQLLKH  251 (254)
T ss_pred             hhhCcCHHHHhcC
Confidence            9999999999865

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=9.5e-33  Score=258.99  Aligned_cols=226  Identities=18%  Similarity=0.240  Sum_probs=189.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+++++  +..+++|.+...... ......+.+| .++++++||||+++++++.+....++|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence            4778899999999999999874  789999999864433 3345567778 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-C
Q 039021          210 YLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-~  266 (464)
                      |+++++|.+++..    ...+++..+..++.|++.                  ||++++++.+||+|||+++...... .
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~  159 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK  159 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence            9999999999865    357899999999999986                  9999999999999999998876442 2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...+++.|++||.+.+..++.++|+||||+++|+|++|+.||...+.. ..........+..+ ..++.++.+++.+||.
T Consensus       160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~  238 (256)
T cd08530         160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP-PIYSQDLQNFIRSMLQ  238 (256)
T ss_pred             cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc-hhhCHHHHHHHHHHcC
Confidence            334889999999999999999999999999999999999999877632 22223333333333 4678999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 039021          346 KDPSKRPTFAAVIIT  360 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~  360 (464)
                      .+|++|||+.++++|
T Consensus       239 ~~p~~Rp~~~~~l~~  253 (256)
T cd08530         239 VKPKLRPNCDKILAS  253 (256)
T ss_pred             CCcccCCCHHHHhcC
Confidence            999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=7.8e-33  Score=268.40  Aligned_cols=219  Identities=19%  Similarity=0.218  Sum_probs=167.1

Q ss_pred             ccccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCceEEEEE
Q 039021          137 SSMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEMILITE  209 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~~lv~E  209 (464)
                      +++||+|+||+||+|+++    ++.||+|.+.....     ...+.+| .+|++++||||+++++++..  +..+++|||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence            468999999999999963    57899999876422     2345678 99999999999999999864  456899999


Q ss_pred             ecCCCChHHHHhhc---------cCCCHHHHHHHHHHHHh------------------hhcc----cCCCceeEecchhh
Q 039021          210 YLPKGNLKGILSKK---------VRLDLPTALRYALDIAR------------------NLLQ----DEGDHLKIGEYWVQ  258 (464)
Q Consensus       210 ~~~~g~L~~~l~~~---------~~l~~~~~~~~~~qi~~------------------Nill----~~~~~~kl~DFG~a  258 (464)
                      |+.+ +|.+++...         ..+++..+..++.|++.                  |||+    +..+.+||+|||++
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            9965 888887532         35899999999999986                  9999    45678999999999


Q ss_pred             hhhcccC------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccchh----------ccc--
Q 039021          259 MFYEQIH------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM----------HLK--  319 (464)
Q Consensus       259 ~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~----------~~~--  319 (464)
                      +......      ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........          ..+  
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  239 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence            8765321      23348999999999877 5689999999999999999999999965331100          000  


Q ss_pred             cccCC-----------C------------C-----------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          320 SVNFE-----------P------------K-----------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       320 ~~~~~-----------~------------~-----------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ..+.+           +            .           ......+.++.+||.+||+.||.+|||+.|+++|-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp  315 (317)
T cd07868         240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP  315 (317)
T ss_pred             hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence            00000           0            0           00012346788999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.1e-32  Score=259.23  Aligned_cols=215  Identities=22%  Similarity=0.263  Sum_probs=172.3

Q ss_pred             cccccceeeeeEEeEEeCc------------eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          138 SMVEQGVFGESQTAKWRGT------------WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~------------~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      +.||+|+||.||+|.+.+.            .|++|.+....    .....+.+| .++++++||||+++++++.. ...
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            4689999999999998532            37788776532    115677888 99999999999999999988 778


Q ss_pred             EEEEEecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCC-------ceeEecchhh
Q 039021          205 ILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGD-------HLKIGEYWVQ  258 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~-------~~kl~DFG~a  258 (464)
                      ++||||+++|+|.+++.... .+++..++.++.||+.                  |||++.++       .+||+|||++
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999999998755 7999999999999986                  99999887       7999999999


Q ss_pred             hhhcccCCCCcCCCCcccccccccC--CCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcH
Q 039021          259 MFYEQIHPNQENSQRNDNSSIASNV--LDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       259 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      +.... .....++..|+|||++...  .++.++|||||||++|+|++ |..||..... ........  ....+ .....
T Consensus       156 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~--~~~~~-~~~~~  231 (259)
T cd05037         156 ITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD--QHRLP-MPDCA  231 (259)
T ss_pred             ccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc--CCCCC-CCCch
Confidence            87654 2234477889999998876  78899999999999999999 6788876642 11111111  11111 11247


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+.+++.+||..+|++|||+.++++.|
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2e-32  Score=256.80  Aligned_cols=226  Identities=19%  Similarity=0.296  Sum_probs=190.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||.|+||.||++.+.  +..|++|++...... ......+.+| +++++++|||++++++.+..++..++|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence            4778899999999999999985  889999999864332 3445567888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          210 YLPKGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |+++++|.+++...    ..+++..+..++.|++.                  ||+++.++.+||+|||++.......  
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  159 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL  159 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence            99999999999763    68999999999999986                  9999999999999999998765432  


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                       ....|++.|+|||...+..++.++|+||||+++|+|++|+.||.... ............+.. +..++.++.+++.+|
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~  238 (258)
T cd08215         160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI-PSQYSSELRNLVSSL  238 (258)
T ss_pred             ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHH
Confidence             23348899999999988889999999999999999999999998766 222222222222222 246889999999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~  360 (464)
                      |..+|++|||+.+++.+
T Consensus       239 l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         239 LQKDPEERPSIAQILQS  255 (258)
T ss_pred             cCCChhhCcCHHHHhcC
Confidence            99999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=8.5e-33  Score=263.75  Aligned_cols=227  Identities=22%  Similarity=0.300  Sum_probs=179.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||.|+||.||+|++.  ++.||+|.+...... ......+.+| +++++++||||+++++++.+++..++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence            4778899999999999999984  889999998754322 2233567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          210 YLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |+. ++|.+++..  ...+++..++.++.|++.                  ||++++++.+||+|||+++......   .
T Consensus        80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  158 (284)
T cd07860          80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT  158 (284)
T ss_pred             ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence            996 589988865  357899999999999986                  9999999999999999998765322   2


Q ss_pred             CCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcc-ccc-cCC------------------
Q 039021          267 NQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHL-KSV-NFE------------------  324 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~-~~~-~~~------------------  324 (464)
                      ...+++.|+|||++.+. .++.++|||||||++|+|++|+.||..... ..... ... +.+                  
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence            23478899999988764 468899999999999999999999976541 11100 000 000                  


Q ss_pred             CCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          325 PKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       325 ~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+       ....+++++.++|.+||+.||++|||+.+++.|-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  282 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHP  282 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCC
Confidence            000       0134678999999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=2.6e-32  Score=258.28  Aligned_cols=220  Identities=22%  Similarity=0.274  Sum_probs=168.0

Q ss_pred             cccccceeeeeEEeEEe-C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          138 SMVEQGVFGESQTAKWR-G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      +.||+|+||+||++.+. +   ..+++|.+....  .......+.+| .+++.++||||+++++.+.+....++||||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE   78 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence            36999999999999863 3   245566655432  23345678888 99999999999999999999999999999999


Q ss_pred             CCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc-----cC
Q 039021          213 KGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ-----IH  265 (464)
Q Consensus       213 ~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~-----~~  265 (464)
                      +|+|.+++++.    ..+++..+..++.||++                  |||++.++.+||+|||++.....     ..
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            99999999753    34566777888888875                  99999999999999999864321     12


Q ss_pred             CCCcCCCCccccccccc-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccC-----CCCccCCC
Q 039021          266 PNQENSQRNDNSSIASN-------VLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNF-----EPKFQISR  331 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~-----~~~~~~~~  331 (464)
                      ....++..|+|||++..       ..++.++|||||||++|||++ |..||.... .+.........     .+... ..
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  237 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE-LP  237 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC-CC
Confidence            23458899999998743       345789999999999999997 677887655 22222221111     12222 34


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +++.+.+++..|| .+|++||++++|++.|
T Consensus       238 ~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         238 YSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             CcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence            7889999999999 6799999999998876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-33  Score=263.84  Aligned_cols=229  Identities=19%  Similarity=0.187  Sum_probs=184.4

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchH----HHHHhHHHH-HHHHhcCCCceeeeeceeee-CCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPV----KMVLSAKDN-CKLRELRHPNILQFLGSIVL-GEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~----~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~~  203 (464)
                      .+|-++..||+|||++||+|.+  ..+.||+|+-........    .......+| +|.+.|+||-||++|++|.- .+.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            3688899999999999999997  488999999765433322    233446678 99999999999999999975 467


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------hhcccCC---CceeEecchhhhh
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------NLLQDEG---DHLKIGEYWVQMF  260 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------Nill~~~---~~~kl~DFG~a~~  260 (464)
                      +|-|+|||+|.+|.-||+.+..+++.+++.|+.||+.                    ||||...   |.+||.|||+++.
T Consensus       543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI  622 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI  622 (775)
T ss_pred             ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence            8999999999999999999999999999999999975                    9998654   6799999999998


Q ss_pred             hcccCCC----------CcCCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccc--ccc
Q 039021          261 YEQIHPN----------QENSQRNDNSSIASNV----LDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLK--SVN  322 (464)
Q Consensus       261 ~~~~~~~----------~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~--~~~  322 (464)
                      ..+....          ..||..|++||.+.-.    ..+.|+||||+|||+|+.+.|+.||....  .+++...  ...
T Consensus       623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA  702 (775)
T KOG1151|consen  623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA  702 (775)
T ss_pred             ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence            7643322          2399999999987533    45789999999999999999999998765  2222221  111


Q ss_pred             CCCCccC-CCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          323 FEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       323 ~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ....||+ +.++.++++||++||++..++|....++..+
T Consensus       703 tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  703 TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence            2233333 5689999999999999999999988888765

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.2e-32  Score=261.06  Aligned_cols=228  Identities=19%  Similarity=0.231  Sum_probs=182.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.+.  |+.||+|++...... ......+.+| .++++++||||+++++++..+...++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence            4788899999999999999984  889999999865322 2334567888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----C
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~  266 (464)
                      |+ +++|.+++.. ...+++.+++.++.||++                  ||+++.++.+||+|||++.......    .
T Consensus        80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (286)
T cd07832          80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS  158 (286)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence            99 9999999865 467999999999999986                  9999999999999999998765432    2


Q ss_pred             CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc----------------------c
Q 039021          267 NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV----------------------N  322 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~----------------------~  322 (464)
                      ...|+..|+|||++.+ ..++.++||||||+++|+|++|..||..... ........                      .
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07832         159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT  238 (286)
T ss_pred             cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence            3458999999999865 4568999999999999999999888865431 11100000                      0


Q ss_pred             CC--CC--c--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 FE--PK--F--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 ~~--~~--~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ..  ..  +  ..+..+.++.+++.+||..+|++|||+++++.|.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~  284 (286)
T cd07832         239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY  284 (286)
T ss_pred             CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence            00  00  0  01345789999999999999999999999998743

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=2.9e-32  Score=261.77  Aligned_cols=229  Identities=12%  Similarity=0.173  Sum_probs=180.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|.++....  ......+..| .++.++ +||||+++++++.++...|+|
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            36888999999999999999996  89999999986432  2223344445 555555 599999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |||+.+ +|.+++.. ...+++..+..++.|+++                   ||++++++.+||+|||++.......  
T Consensus        93 ~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~  171 (296)
T cd06618          93 MELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK  171 (296)
T ss_pred             eeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc
Confidence            999864 77777654 457899999999999876                   9999999999999999998765332  


Q ss_pred             CCCcCCCCcccccccccCC----CCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC-CCCcHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVL----DDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI-SRCPNRLKQ  338 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~  338 (464)
                      ....++..|+|||++....    ++.++||||||+++|+|++|+.||....  .+..........+..+. ..+++++.+
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  251 (296)
T cd06618         172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCS  251 (296)
T ss_pred             cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence            2234788999999987543    7889999999999999999999997643  22222222222222222 247899999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |+.+||..||++||++.+++.+.+.
T Consensus       252 li~~~l~~~p~~Rp~~~~il~~~~~  276 (296)
T cd06618         252 FVDLCLTKDHRKRPKYRELLQHPFI  276 (296)
T ss_pred             HHHHHccCChhhCCCHHHHhcChhh
Confidence            9999999999999999999998653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-32  Score=256.49  Aligned_cols=220  Identities=22%  Similarity=0.249  Sum_probs=185.4

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|+||.||++.+.  ++.|++|++.............+..| .++++++||||+++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999984  88999999987654444566678888 999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCCcCCCCcc
Q 039021          217 KGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQENSQRND  275 (464)
Q Consensus       217 ~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~  275 (464)
                      .+++.....+++..+..++.|++.                  ||+++.++.+||+|||++......   .....++..|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL  160 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence            999988778999999999999986                  999999999999999999876543   23345899999


Q ss_pred             cccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCH-
Q 039021          276 NSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTF-  354 (464)
Q Consensus       276 aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-  354 (464)
                      +||.+.+...+.++|+||||+++|+|++|..||..................++ ...+..+.+++++||..||++||++ 
T Consensus       161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP-EFLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence            99999888889999999999999999999999977653222222222233333 4468999999999999999999999 


Q ss_pred             --HHHHHH
Q 039021          355 --AAVIIT  360 (464)
Q Consensus       355 --~~i~~~  360 (464)
                        .+++.|
T Consensus       240 ~~~~l~~~  247 (250)
T cd05123         240 GAEEIKAH  247 (250)
T ss_pred             cHHHHHhC
Confidence              666655

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.5e-32  Score=261.68  Aligned_cols=225  Identities=17%  Similarity=0.263  Sum_probs=183.6

Q ss_pred             ccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          135 LHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      .....||+|+||.||++..  ++..||+|.+...   .......+.+| .+++.++||||+++++.+...+..++||||+
T Consensus        23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   99 (292)
T cd06657          23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL   99 (292)
T ss_pred             hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence            3346899999999999988  4889999988642   23345568888 9999999999999999999999999999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCcC
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQEN  270 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~g  270 (464)
                      ++++|.+++.. ..+++..++.++.|++.                  ||++++++.+||+|||++.......   ....|
T Consensus       100 ~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  178 (292)
T cd06657         100 EGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG  178 (292)
T ss_pred             CCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence            99999998754 47899999999999976                  9999999999999999987654322   12348


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHcccCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp  348 (464)
                      ++.|++||++.+..++.++||||||+++|+|++|..||.... ...........+..+. ...+++.+.+++.+||+.+|
T Consensus       179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P  258 (292)
T cd06657         179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDP  258 (292)
T ss_pred             CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCc
Confidence            899999999988888999999999999999999999998765 2222222222222221 24578999999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEE  363 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~  363 (464)
                      .+||++.+++.|-+.
T Consensus       259 ~~R~~~~~ll~~~~~  273 (292)
T cd06657         259 AQRATAAELLKHPFL  273 (292)
T ss_pred             ccCcCHHHHhcChHH
Confidence            999999999998543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.8e-32  Score=257.94  Aligned_cols=221  Identities=16%  Similarity=0.213  Sum_probs=175.1

Q ss_pred             cccccccc--ccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHHHHHHh-cCCCceeeeeceeeeCCceEEE
Q 039021          133 NTLHSSMV--EQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-LRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~l--g~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~l~~-l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +|.+.+.+  |+|+||.||+++.+  +..+|+|.+.......      ... ..... .+||||++++++|...+..++|
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~-~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEP-MVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhH-HHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            34555555  99999999999974  7889999987632211      111 12221 2799999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccCCCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIHPNQ  268 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~~~~  268 (464)
                      |||+++|+|.+++.....+++.++..++.|+++                  ||+++.++ .+||+|||+++..... ...
T Consensus        88 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-~~~  166 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-SCY  166 (267)
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-ccC
Confidence            999999999999988779999999999999986                  99999988 9999999998866432 234


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh---cccc-ccCCCCccCCCCcHHHHHHHHHHc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM---HLKS-VNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      .|+..|+|||++.+..++.++|||||||++|+|++|..||.....+..   .... ...... ....+++.+.+||.+||
T Consensus       167 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l  245 (267)
T PHA03390        167 DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLP-FIKNVSKNANDFVQSML  245 (267)
T ss_pred             CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCC-cccccCHHHHHHHHHHh
Confidence            589999999999988999999999999999999999999985542211   1111 111222 22468999999999999


Q ss_pred             ccCCCCCCC-HHHHHHHHH
Q 039021          345 NKDPSKRPT-FAAVIITLE  362 (464)
Q Consensus       345 ~~dp~~Rpt-~~~i~~~l~  362 (464)
                      +.+|.+||+ ++++++|-+
T Consensus       246 ~~~p~~R~~~~~~~l~h~~  264 (267)
T PHA03390        246 KYNINYRLTNYNEIIKHPF  264 (267)
T ss_pred             ccChhhCCchHHHHhcCCc
Confidence            999999995 699998743

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-34  Score=270.63  Aligned_cols=232  Identities=17%  Similarity=0.118  Sum_probs=204.3

Q ss_pred             ccccccccccceeeeeEEeEEeCce--EEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTW--VVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +++.+..||-|+||.|-+++.+++.  +|+|++++....+.++.+.+..| ++|..++.|+||++|-.|.+...+|+.||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            5677889999999999999987554  89999998887788888889999 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~~  269 (464)
                      -|-||.|+..++.++.++...+..|+..+++                  |+++|.+|-+||.|||+|+.+....  -++|
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFc  580 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFC  580 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeec
Confidence            9999999999999999999999999888875                  9999999999999999999998654  3577


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccccc-CCCCccCCCCcHHHHHHHHHHcccC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVN-FEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      |||.|.|||++.++..+.++|.|||||++|||++|.+||.+.+. .....+..+ ....+| ..++....+||+++...+
T Consensus       581 GTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P-r~I~k~a~~Lik~LCr~~  659 (732)
T KOG0614|consen  581 GTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP-RRITKTATDLIKKLCRDN  659 (732)
T ss_pred             CCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc-cccchhHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999883 322233222 233444 668899999999999999


Q ss_pred             CCCCCC-----HHHHHHHHHHHH
Q 039021          348 PSKRPT-----FAAVIITLEEVS  365 (464)
Q Consensus       348 p~~Rpt-----~~~i~~~l~~~~  365 (464)
                      |.+|..     +.+|.+|.|...
T Consensus       660 P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  660 PTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             cHhhhccccCChHHHHhhhhhhc
Confidence            999975     789999988653

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=2e-32  Score=265.46  Aligned_cols=219  Identities=19%  Similarity=0.223  Sum_probs=166.4

Q ss_pred             ccccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCceEEEEE
Q 039021          137 SSMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEMILITE  209 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~~lv~E  209 (464)
                      +.+||+|+||+||+|+++    +..||+|.+.....     ...+.+| .++++++||||+++++++..  +...++|||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence            468999999999999973    46899999876422     2346678 99999999999999999864  467899999


Q ss_pred             ecCCCChHHHHhhc---------cCCCHHHHHHHHHHHHh------------------hhcc----cCCCceeEecchhh
Q 039021          210 YLPKGNLKGILSKK---------VRLDLPTALRYALDIAR------------------NLLQ----DEGDHLKIGEYWVQ  258 (464)
Q Consensus       210 ~~~~g~L~~~l~~~---------~~l~~~~~~~~~~qi~~------------------Nill----~~~~~~kl~DFG~a  258 (464)
                      |+.+ +|.+++...         ..+++..+..++.|++.                  |||+    +.++.+||+|||++
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            9975 888877421         35888999999999986                  9999    55678999999999


Q ss_pred             hhhcccC------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcc-----------cc
Q 039021          259 MFYEQIH------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL-----------KS  320 (464)
Q Consensus       259 ~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~-----------~~  320 (464)
                      +......      ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....+....           ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS  239 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence            8765322      22348999999999876 458899999999999999999999997533110000           00


Q ss_pred             -cc-----------CCCC------------c-----------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          321 -VN-----------FEPK------------F-----------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       321 -~~-----------~~~~------------~-----------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                       .+           ..+.            .           .....+..+.+|+.+||+.||.+|||+.|+++|.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp  315 (317)
T cd07867         240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP  315 (317)
T ss_pred             hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCC
Confidence             00           0000            0           0012346788999999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.3e-32  Score=252.14  Aligned_cols=227  Identities=19%  Similarity=0.252  Sum_probs=181.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc-eeeeeceeeeCC------
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN-ILQFLGSIVLGE------  202 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn-Iv~~~~~~~~~~------  202 (464)
                      .|...++||+|+||+||+|+.+  |+.||+|.+...... +..-....+| .+|+.|+|+| ||++++++.+.+      
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            4777788999999999999984  899999999864321 1222345667 9999999999 999999999877      


Q ss_pred             ceEEEEEecCCCChHHHHhhcc----CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          203 EMILITEYLPKGNLKGILSKKV----RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      .+++|+||++. +|.+++....    .++...+..+++||++                  |||++++|.+||+|||+|+.
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence            79999999986 9999997643    5788899999999987                  99999999999999999998


Q ss_pred             hcccC---CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccc-c--------------
Q 039021          261 YEQIH---PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLK-S--------------  320 (464)
Q Consensus       261 ~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~-~--------------  320 (464)
                      ..-..   ....+|..|.|||++.+. .|+..+||||+|||+.||++++.-|.+.. .+....+ .              
T Consensus       170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~  249 (323)
T KOG0594|consen  170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS  249 (323)
T ss_pred             hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence            76322   334489999999999885 79999999999999999999999998876 1111110 0              


Q ss_pred             --ccCCCCcc----C-------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          321 --VNFEPKFQ----I-------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       321 --~~~~~~~~----~-------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                        ......++    +       +...+...+++.+||+.+|.+|.|++.++.|-
T Consensus       250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~  303 (323)
T KOG0594|consen  250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP  303 (323)
T ss_pred             ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence              00011111    1       22335889999999999999999999999983

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-32  Score=261.37  Aligned_cols=226  Identities=19%  Similarity=0.251  Sum_probs=176.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|+++  ++.||+|.+......  .....+.+| +++++++||||+++++++.+.+..++|||
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            6888999999999999999984  889999999754221  122345678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+.+ +|.+++... ..+++..+..++.|++.                  ||++++++.+||+|||+++......   ..
T Consensus        84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (291)
T cd07844          84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN  162 (291)
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence            9985 999988653 57899999999999986                  9999999999999999987653211   12


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhcccc---c-------------------c
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKS---V-------------------N  322 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~---~-------------------~  322 (464)
                      ..++..|+|||++.+ ..++.++|||||||++|+|++|+.||....  .+......   .                   .
T Consensus       163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence            237889999999876 568899999999999999999999996543  11100000   0                   0


Q ss_pred             CC----CCc--cCCCCc--HHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          323 FE----PKF--QISRCP--NRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       323 ~~----~~~--~~~~~~--~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ..    ...  ....++  .++.+++.+||+.+|++|||+.+++.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~  289 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP  289 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence            00    000  001233  7889999999999999999999998763

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=3.3e-32  Score=260.58  Aligned_cols=228  Identities=18%  Similarity=0.227  Sum_probs=183.3

Q ss_pred             ccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCc-hHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYH-PVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~  204 (464)
                      +|++.+.||+|+||.||++++     +|..||+|+++..... .....+.+.+| .+++++ +||||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            367889999999999999987     4789999999753221 12334567788 999999 699999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+++++|.+++.....+++..+..++.|+++                  |||++.++.+||+|||+++...... 
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            999999999999999988888999999999999986                  9999999999999999998764322 


Q ss_pred             ---CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccCCCCccCCCCcHHH
Q 039021          266 ---PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                         ....|+..|+|||++..  ..++.++||||||+++|+|++|..||....    ............++++ ..+++.+
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  239 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP-QEMSALA  239 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCC-ccCCHHH
Confidence               12348999999999875  356789999999999999999999997433    1111111111223333 4578999


Q ss_pred             HHHHHHHcccCCCCCC-----CHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRP-----TFAAVIITL  361 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rp-----t~~~i~~~l  361 (464)
                      .+++.+||+.||++||     ++.+++.|-
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~  269 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKKHP  269 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHcCc
Confidence            9999999999999997     778887764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-32  Score=275.57  Aligned_cols=222  Identities=16%  Similarity=0.166  Sum_probs=176.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|.+.+.||+|+||.||+|.+.  ++.||+|....         ..+.+| ++|++++|||||++++++..++..++|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv  238 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV  238 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            346899999999999999999985  78899996432         235678 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          208 TEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      ||++. ++|.+++... ..+++.+++.++.|+++                  |||++.++.+||+|||+++......   
T Consensus       239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~  317 (461)
T PHA03211        239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP  317 (461)
T ss_pred             EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence            99995 6999888653 57999999999999986                  9999999999999999998764321   


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---------cchhcccccc------------
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---------FDFMHLKSVN------------  322 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---------~~~~~~~~~~------------  322 (464)
                        ....||+.|+|||++.+..++.++|||||||++|||++|..|+....         .+....+...            
T Consensus       318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~  397 (461)
T PHA03211        318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG  397 (461)
T ss_pred             cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence              13459999999999999999999999999999999999876543211         0111110000            


Q ss_pred             --------------CCCCccC------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 --------------FEPKFQI------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 --------------~~~~~~~------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                    ..+.+..      ..++..+.+||.+||+.||.+|||+.|+++|-+
T Consensus       398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~  457 (461)
T PHA03211        398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL  457 (461)
T ss_pred             hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence                          0000000      124568899999999999999999999999854

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=4.4e-32  Score=260.13  Aligned_cols=226  Identities=19%  Similarity=0.224  Sum_probs=179.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv  207 (464)
                      +|++.+.||+|+||.||+|.++  ++.|++|.++..... ......+.+| .++++++||||+++++++...  +..|+|
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            6888999999999999999985  789999999864322 2223345678 999999999999999999877  889999


Q ss_pred             EEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          208 TEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |||+.+ +|.+++... ..+++..++.++.|++.                  ||+++.++.+||+|||+++......   
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  163 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY  163 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence            999985 999988764 45899999999999987                  9999999999999999998765432   


Q ss_pred             CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------c--
Q 039021          266 PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------V--  321 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~--  321 (464)
                      ....+++.|+|||.+.+. .++.++||||||+++|+|++|..||..... .......                    .  
T Consensus       164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (293)
T cd07843         164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK  243 (293)
T ss_pred             ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccc
Confidence            223478899999988764 468899999999999999999999976541 1100000                    0  


Q ss_pred             --------cCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          322 --------NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       322 --------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                              .....++...+++.+.++|.+||+.||++|||+.|++.|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         244 TFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             ccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                    000111111158889999999999999999999999876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=4e-32  Score=260.13  Aligned_cols=227  Identities=18%  Similarity=0.204  Sum_probs=176.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|.++  +..||+|++.....  ......+.+| .+++.++|+||+++++++.+++..++||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            46888999999999999999874  88999999975422  1222345678 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      ||+. ++|.+++.. ...+++..+..++.|++.                  |||++.++.+||+|||+++......   .
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  161 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS  161 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence            9996 577777654 456888899999999976                  9999999999999999998654321   2


Q ss_pred             CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhcccc-----------------ccCCCC
Q 039021          267 NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLKS-----------------VNFEPK  326 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~~-----------------~~~~~~  326 (464)
                      ...+++.|+|||++.+ ..++.++|||||||++|+|++|..||.....  +......                 ....+.
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            2347899999999876 4578899999999999999999999976541  1100000                 000000


Q ss_pred             c-------------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          327 F-------------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       327 ~-------------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +             .....++++.+++.+||+.||.+|||+.+++.|-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~  289 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP  289 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCC
Confidence            0             0012367899999999999999999999998763

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=4e-32  Score=258.69  Aligned_cols=224  Identities=19%  Similarity=0.224  Sum_probs=174.3

Q ss_pred             cccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeC--CceEEE
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLG--EEMILI  207 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~--~~~~lv  207 (464)
                      |++.+.||+|+||.||+|.+  +++.||+|.++..... ..... ..+| .+++++. ||||+++++++.+.  +.+++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~-~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS-LEQVN-NLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV   78 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC-chhhh-HHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence            56788999999999999998  4889999998764322 22222 3356 7888885 99999999999987  889999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--C
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--P  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~  266 (464)
                      |||+++ +|.+.+.. ...+++.+++.++.|++.                  ||+++. +.+||+|||+++......  .
T Consensus        79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~  156 (282)
T cd07831          79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT  156 (282)
T ss_pred             EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence            999974 88888865 457899999999999986                  999999 999999999998765432  2


Q ss_pred             CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---------------c--cCCCCc
Q 039021          267 NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---------------V--NFEPKF  327 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---------------~--~~~~~~  327 (464)
                      ...++..|+|||++.. ..++.++|||||||++|||++|..||...+. +......               .  .....+
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07831         157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF  236 (282)
T ss_pred             CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence            3348899999997644 5678899999999999999999999976541 1110000               0  000000


Q ss_pred             c----------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          328 Q----------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       328 ~----------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +          ...++.++.+||.+||+.+|++|||+.++++|-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~  280 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP  280 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence            0          134689999999999999999999999999873

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=4.5e-32  Score=258.68  Aligned_cols=225  Identities=19%  Similarity=0.250  Sum_probs=179.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|++|.||+|++.  |..||+|.++....  ......+.+| .++++++||||+++++++.+.+..++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence            4778899999999999999984  88999999986432  2223456678 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc---cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          210 YLPKGNLKGILSKK---VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |+++ +|.+++...   ..+++..+..++.|++.                  ||++++++.+||+|||+++......   
T Consensus        79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~  157 (284)
T cd07836          79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF  157 (284)
T ss_pred             cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence            9985 898888653   46899999999999986                  9999999999999999998664321   


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhcccc-----------------ccCCCC
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKS-----------------VNFEPK  326 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~-----------------~~~~~~  326 (464)
                      ....++..|++||++.+ ..++.++|||||||++|+|++|+.||.+.+.. ......                 ......
T Consensus       158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd07836         158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT  237 (284)
T ss_pred             ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence            23347889999998866 45788999999999999999999999865511 111000                 000000


Q ss_pred             cc----------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          327 FQ----------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       327 ~~----------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ++          .+.+++.+.+++.+||+.||++||++.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00          12457889999999999999999999999876

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-32  Score=259.21  Aligned_cols=226  Identities=21%  Similarity=0.254  Sum_probs=179.0

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |++.+.||.|++|.||+|.++  |..||+|++...... ......+.+| ++++.++||||+++++++.+++..++||||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~   79 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF   79 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence            567789999999999999984  899999999754321 2233457778 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          211 LPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       211 ~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ++ ++|.+++....  .+++..+..++.|+++                  ||+++.++.+||+|||+++......   ..
T Consensus        80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~  158 (283)
T cd07835          80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH  158 (283)
T ss_pred             cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence            95 59999997654  7899999999999986                  9999999999999999997654221   22


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc-c-----------------------c
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK-S-----------------------V  321 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~-~-----------------------~  321 (464)
                      ..++..|+|||++.+ ..++.++||||||+++|+|++|+.||..... ...... .                       .
T Consensus       159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07835         159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP  238 (283)
T ss_pred             cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence            346889999998866 4578999999999999999999999976541 100000 0                       0


Q ss_pred             cCC---CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          322 NFE---PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       322 ~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ...   .......+++.+.+++.+||+.||++|||+.+++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~  281 (283)
T cd07835         239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP  281 (283)
T ss_pred             cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCC
Confidence            000   0001144678999999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=4.4e-32  Score=259.46  Aligned_cols=227  Identities=16%  Similarity=0.189  Sum_probs=180.8

Q ss_pred             ccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCc-hHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYH-PVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~  204 (464)
                      +|++.+.||+|+||.||++++     ++..||+|+++..... .......+.+| .+++++ +||||+++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            367789999999999999986     3678999999853221 12334567788 999999 699999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+++|+|.+++.....+++..+..++.|+++                  ||+++.++.+||+|||+++...... 
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            999999999999999987778999999999999986                  9999999999999999988754322 


Q ss_pred             ---CCCcCCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCCCc-----cchhccccccCCCCccCCCCcHH
Q 039021          266 ---PNQENSQRNDNSSIASNVL--DDTKKDICSFGYIFYQMLEGKHLQTNNS-----FDFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                         ....|+..|++||.+.+..  .+.++||||||+++|+|++|..||....     ......... ..+..+ ..++..
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~  238 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-SKPPFP-KTMSAE  238 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-cCCCCC-cccCHH
Confidence               1234889999999987654  7889999999999999999999996432     111111111 122222 457899


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +.+++.+||+.||++|||+.++...|
T Consensus       239 l~~li~~~l~~~p~~R~t~~~~~~~l  264 (288)
T cd05583         239 ARDFIQKLLEKDPKKRLGANGADEIK  264 (288)
T ss_pred             HHHHHHHHhcCCHhhccCcchHHHHh
Confidence            99999999999999999976664433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.98  E-value=7.4e-32  Score=265.53  Aligned_cols=228  Identities=17%  Similarity=0.155  Sum_probs=179.4

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~  202 (464)
                      .+|++.+.||+|+||.||+|.+  .++.||+|.+...... ......+.+| .++++++||||++++++|...      .
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN-VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC-hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            3688999999999999999998  4889999998753222 2334556678 999999999999999988643      3


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..|+||||+.+ +|.+.+...  +++..+..++.|+++                  ||+++.++.+||+|||+++.....
T Consensus        95 ~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  171 (353)
T cd07850          95 DVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  171 (353)
T ss_pred             cEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence            57999999975 888888653  899999999999986                  999999999999999999876543


Q ss_pred             C--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---------------------
Q 039021          265 H--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---------------------  320 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---------------------  320 (464)
                      .  ....++..|+|||++.+..++.++|||||||++|+|++|+.||...+. .......                     
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (353)
T cd07850         172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNY  251 (353)
T ss_pred             CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHH
Confidence            2  223488999999999999999999999999999999999999976541 1000000                     


Q ss_pred             ccCCCC--------------cc------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 VNFEPK--------------FQ------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 ~~~~~~--------------~~------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ....+.              ++      ....++++.++|.+||+.||++|||+.+++.|-+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~  314 (353)
T cd07850         252 VENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYI  314 (353)
T ss_pred             hhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhH
Confidence            000000              00      11346778999999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.98  E-value=7.3e-32  Score=260.65  Aligned_cols=229  Identities=19%  Similarity=0.205  Sum_probs=179.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv  207 (464)
                      +|++.+.||+|+||.||+|.++  |+.||+|.++...... .....+.+| .++++++||||+++++++...  +.+++|
T Consensus         8 ~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845           8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             ceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence            6889999999999999999984  8899999997543221 122244568 999999999999999998765  568999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |||+.+ +|.+++.. ...+++.++..++.|+++                  ||+++.++.+||+|||+++......   
T Consensus        87 ~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~  165 (309)
T cd07845          87 MEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM  165 (309)
T ss_pred             EecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence            999975 88888865 467999999999999986                  9999999999999999998765332   


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccccc------------------CCC
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVN------------------FEP  325 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~------------------~~~  325 (464)
                      ....+++.|+|||++.+ ..++.++|||||||++|||++|..||...+ .+........                  ...
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (309)
T cd07845         166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF  245 (309)
T ss_pred             CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccc
Confidence            12236788999999865 567899999999999999999999998665 1111110000                  000


Q ss_pred             Ccc----------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          326 KFQ----------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       326 ~~~----------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ...          ....++++.++|.+||+.||++|||+.+++.|.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f  293 (309)
T cd07845         246 TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF  293 (309)
T ss_pred             cccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence            000          02257889999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.98  E-value=5.1e-32  Score=254.97  Aligned_cols=227  Identities=21%  Similarity=0.250  Sum_probs=180.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc--hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH--PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~--~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +|.+.+.||+|+||.||++++.  +..+++|+++.....  .......+..| .++++++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            4778899999999999999985  455667776642211  12233456677 899999999999999999999999999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||+++++|.+++..    ...+++..++.++.|+++                  ||++++ +.+||+|||+++......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999988853    357899999999999986                  888875 569999999987764322


Q ss_pred             ---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 ---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                         ....|++.|+|||...+..++.++|+||||+++|+|++|..||.... .........+..+.. +..++.++.++|.
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  238 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL-PETYSRQLNSIMQ  238 (260)
T ss_pred             ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC-cchhcHHHHHHHH
Confidence               23348899999999988889999999999999999999999997655 222222222223333 2567899999999


Q ss_pred             HHcccCCCCCCCHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +||..+|++||++.++++|-
T Consensus       239 ~~l~~~p~~Rp~~~~il~~~  258 (260)
T cd08222         239 SMLNKDPSLRPSAAEILRNP  258 (260)
T ss_pred             HHhcCChhhCcCHHHHhhCC
Confidence            99999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=6.5e-33  Score=247.83  Aligned_cols=219  Identities=16%  Similarity=0.124  Sum_probs=180.3

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HH-HHhcCCCceeeeeceeee----CCceEEEEE
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CK-LRELRHPNILQFLGSIVL----GEEMILITE  209 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~-l~~l~hpnIv~~~~~~~~----~~~~~lv~E  209 (464)
                      ++||-|-.|+|..|.++  |+.+|+|++...        ...++| ++ +..-.|||||+++++|++    ...+.+|||
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE  139 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME  139 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence            68999999999999885  889999999852        245666 44 344489999999999985    356889999


Q ss_pred             ecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhc--cc
Q 039021          210 YLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYE--QI  264 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~--~~  264 (464)
                      .++||+|++.|..++  .+++.++..|+.||+.                  |+|....   -.+||+|||+|+...  ..
T Consensus       140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~  219 (400)
T KOG0604|consen  140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGD  219 (400)
T ss_pred             cccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCcc
Confidence            999999999998764  5999999999999975                  8887653   469999999999876  34


Q ss_pred             CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccCCCCccC---CCCcHHHH
Q 039021          265 HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKFQI---SRCPNRLK  337 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~  337 (464)
                      ..+.+-||+|.|||++....|+..+|+||+||++|-|++|.+||....    ..-+...+......|+.   +.+|+..+
T Consensus       220 L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aK  299 (400)
T KOG0604|consen  220 LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAK  299 (400)
T ss_pred             ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHH
Confidence            456779999999999999999999999999999999999999997654    22223333333344443   45789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ++|+.+|..+|.+|.|+.++++|.|-.
T Consensus       300 dlIR~LLkt~PteRlTI~~~m~hpwi~  326 (400)
T KOG0604|consen  300 DLIRKLLKTEPTERLTIEEVMDHPWIN  326 (400)
T ss_pred             HHHHHHhcCCchhheeHHHhhcCchhc
Confidence            999999999999999999999998744

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.98  E-value=7.9e-32  Score=261.05  Aligned_cols=228  Identities=17%  Similarity=0.162  Sum_probs=177.5

Q ss_pred             ccccccccccceeeeeEEeEE----eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW----RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~  205 (464)
                      +|.+.+.||+|+||.||+|.+    .+..||+|.+.............+.+| .++++++||||+++++++.+.  ..++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            377889999999999999998    368999999987432223334556778 999999999999999999988  7899


Q ss_pred             EEEEecCCCChHHHHhhc-----cCCCHHHHHHHHHHHHh------------------hhcccC----CCceeEecchhh
Q 039021          206 LITEYLPKGNLKGILSKK-----VRLDLPTALRYALDIAR------------------NLLQDE----GDHLKIGEYWVQ  258 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~------------------Nill~~----~~~~kl~DFG~a  258 (464)
                      +||||+++ +|.+++...     ..+++..+..++.|++.                  ||+++.    ++.+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999975 777776432     36899999999999986                  999999    899999999999


Q ss_pred             hhhcccCC------CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccchh---------------
Q 039021          259 MFYEQIHP------NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM---------------  316 (464)
Q Consensus       259 ~~~~~~~~------~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~---------------  316 (464)
                      +.......      ...+++.|+|||++.+ ..++.++|||||||++|+|++|+.||........               
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            87653221      2347889999998876 4578999999999999999999999976542210               


Q ss_pred             --------------------ccccccCCCCcc--------C--CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          317 --------------------HLKSVNFEPKFQ--------I--SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       317 --------------------~~~~~~~~~~~~--------~--~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                                          ..........++        .  ...+.++.+++.+||+.||++|||+.+++.|-
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~  314 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHP  314 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCC
Confidence                                000000000111        0  14567899999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.98  E-value=8e-32  Score=257.11  Aligned_cols=226  Identities=18%  Similarity=0.270  Sum_probs=179.8

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILIT  208 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv~  208 (464)
                      |++.+.||+|+||.||+|.+.  ++.+|+|.+.... ........+.+| +++++++||||+++++++.+.  +..++||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   79 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF   79 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence            567789999999999999985  7899999998753 223334567788 999999999999999999988  8899999


Q ss_pred             EecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          209 EYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      ||+++ +|.+++... ..+++..++.++.|+++                  ||++++++.+||+|||+++......    
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~  158 (287)
T cd07840          80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY  158 (287)
T ss_pred             ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence            99985 999888765 68999999999999986                  9999999999999999998776432    


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccc--------------------cC
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSV--------------------NF  323 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~--------------------~~  323 (464)
                      ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .......                    ..
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07840         159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL  238 (287)
T ss_pred             cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence            23347889999998765 56789999999999999999999999765511 1110000                    00


Q ss_pred             CC--Ccc------CCC-CcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          324 EP--KFQ------ISR-CPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       324 ~~--~~~------~~~-~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+  ..+      ... +++++.+++++||..+|++||++.+++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~  285 (287)
T cd07840         239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE  285 (287)
T ss_pred             cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence            00  000      012 388999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.98  E-value=8.6e-32  Score=258.25  Aligned_cols=227  Identities=19%  Similarity=0.218  Sum_probs=176.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCc-----
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEE-----  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~-----  203 (464)
                      +|++.+.||+|+||.||+|.+.  ++.||+|.+...... ......+.+| .++++++ ||||+++++++...+.     
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            5788899999999999999984  889999998754221 2233456778 9999995 6999999999987665     


Q ss_pred             eEEEEEecCCCChHHHHhhc-----cCCCHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhh
Q 039021          204 MILITEYLPKGNLKGILSKK-----VRLDLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQM  259 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~  259 (464)
                      .|+||||+++ +|.+++...     ..+++..++.++.||+.                  ||+++. ++.+||+|||+++
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            8999999986 898888542     35799999999999986                  999998 8899999999998


Q ss_pred             hhcccC---CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccc-cc------------
Q 039021          260 FYEQIH---PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLK-SV------------  321 (464)
Q Consensus       260 ~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~-~~------------  321 (464)
                      ......   ....+++.|+|||++.+ ..++.++||||||+++|+|++|..||.+.. ....... ..            
T Consensus       160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (295)
T cd07837         160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV  239 (295)
T ss_pred             ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence            654221   22347889999998865 567899999999999999999999997654 1111000 00            


Q ss_pred             ------cCCCCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          322 ------NFEPKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       322 ------~~~~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                            ...+.+       ..+.+++++.+||.+||..||.+||++.+++.|-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~  292 (295)
T cd07837         240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP  292 (295)
T ss_pred             hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence                  000000       0134788999999999999999999999999873

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.98  E-value=1e-33  Score=249.06  Aligned_cols=225  Identities=16%  Similarity=0.215  Sum_probs=177.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +.+..+.||.|+||+|++-.++  |+..|||.++....  ++...++..|  .+++.-+.||||++||.+..++..+|.|
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCM  142 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICM  142 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeH
Confidence            5666789999999999999986  89999999997644  4445566666  6677778999999999999999999999


Q ss_pred             EecCCCChHHHHh-----hccCCCHHHHHHHHHHH----------Hh---------hhcccCCCceeEecchhhhhhccc
Q 039021          209 EYLPKGNLKGILS-----KKVRLDLPTALRYALDI----------AR---------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       209 E~~~~g~L~~~l~-----~~~~l~~~~~~~~~~qi----------~~---------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      |+|.- ||..+.+     .+..++++-+..|....          ++         |||++..|.+||||||++..+.+.
T Consensus       143 ELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S  221 (361)
T KOG1006|consen  143 ELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS  221 (361)
T ss_pred             HHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence            99974 7655442     23466666544433222          22         999999999999999999887754


Q ss_pred             CC--CCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC----CCCcH
Q 039021          265 HP--NQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI----SRCPN  334 (464)
Q Consensus       265 ~~--~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~----~~~~~  334 (464)
                      -.  ...|-..|||||-+..  ..|+.+||||||||+|||+.||+.||...+  .+.+..+..+.+|.+..    -.++.
T Consensus       222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~  301 (361)
T KOG1006|consen  222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSF  301 (361)
T ss_pred             HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCH
Confidence            32  3349999999998843  569999999999999999999999999877  44444454454444332    23688


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .+..+|.-||.+|-+.||...++..+
T Consensus       302 ~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  302 SMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHHHHHHHhhcccccCcchhhhhcC
Confidence            99999999999999999999999876

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.98  E-value=5.8e-32  Score=264.25  Aligned_cols=231  Identities=16%  Similarity=0.178  Sum_probs=183.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee----CCce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL----GEEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~----~~~~  204 (464)
                      .+|++.+.||+|+||.||+|.+.  +..||+|.+...... ......+.+| .+|++++||||+++++++..    ...+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            46888899999999999999974  889999999864322 2234566678 99999999999999998863    3468


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+. |+|.+++...+.+++..+..++.||++                  ||++++++.+||+|||+++...... 
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  162 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT  162 (334)
T ss_pred             EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence            99999996 599999987778999999999999987                  9999999999999999997654321 


Q ss_pred             ------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccc------------------
Q 039021          266 ------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLK------------------  319 (464)
Q Consensus       266 ------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~------------------  319 (464)
                            ....|+..|+|||++.+ ..++.++|||||||++|+|++|+.||...... .....                  
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  242 (334)
T cd07855         163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD  242 (334)
T ss_pred             CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence                  12358899999998865 56889999999999999999999999765411 00000                  


Q ss_pred             -----c--ccCCCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          320 -----S--VNFEPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       320 -----~--~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                           .  .......+    ....++++.++|.+||+.+|++|||+.+++.|.+.-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~  298 (334)
T cd07855         243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA  298 (334)
T ss_pred             hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence                 0  00000100    134688999999999999999999999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.98  E-value=1.2e-31  Score=262.28  Aligned_cols=228  Identities=16%  Similarity=0.188  Sum_probs=178.5

Q ss_pred             ccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHH-----------HHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          135 LHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVK-----------MVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~-----------~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      .+.+.||+|+||.||+|.+.  ++.||+|.++........           ....+.+| +++++++||||+++++++..
T Consensus        12 ~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   91 (335)
T PTZ00024         12 QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE   91 (335)
T ss_pred             hhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence            35678999999999999974  889999998754222100           01235678 99999999999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          201 GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      .+..++||||+. |+|.+++.....+++.....++.|++.                  ||+++.++.+||+|||+++...
T Consensus        92 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024         92 GDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             CCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence            999999999997 599999988788999999999999976                  9999999999999999997655


Q ss_pred             c-----------------cCCCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---
Q 039021          263 Q-----------------IHPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---  320 (464)
Q Consensus       263 ~-----------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---  320 (464)
                      .                 ......+++.|+|||++.+. .++.++|||||||++|+|++|..||..... +....+.   
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~  250 (335)
T PTZ00024        171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELL  250 (335)
T ss_pred             cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            1                 01122368899999998764 468999999999999999999999987651 1111000   


Q ss_pred             c-cC--------------------CCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 V-NF--------------------EPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 ~-~~--------------------~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      . ..                    +...  .....+.++.+++.+||+.+|++|||+.+++.|.+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        251 GTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             CCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            0 00                    0000  013457889999999999999999999999988654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=3.4e-32  Score=273.91  Aligned_cols=224  Identities=17%  Similarity=0.279  Sum_probs=186.7

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee-----CCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL-----GEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~-----~~~  203 (464)
                      -+++.+.||.|.+|.||+++.  +++.+|+|++....    +..+++..| ++|+.+ +|||++.+||+|..     ++.
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            367778999999999999987  48999999998653    333456667 888877 79999999999974     567


Q ss_pred             eEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          204 MILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ++||||||.||+..|++++  ..++.|+.+..|++.+++                  |||++.++.|||+|||++..+..
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds  175 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS  175 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence            9999999999999999975  468899999999999886                  99999999999999999987764


Q ss_pred             c---CCCCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCc
Q 039021          264 I---HPNQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCP  333 (464)
Q Consensus       264 ~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~  333 (464)
                      .   ..+..||+.|||||++..     .-|+.++|+|||||+..||.-|.+|+.+.. ...+..+..+.+|... +..++
T Consensus       176 T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs  255 (953)
T KOG0587|consen  176 TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWS  255 (953)
T ss_pred             ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHH
Confidence            3   234559999999999864     346789999999999999999999998877 4444455455444443 36689


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      +++.+||..||.+|-++||++.++++|
T Consensus       256 ~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  256 KKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             HHHHHHHHHHHhhccccCcchhhhccC
Confidence            999999999999999999999998876

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=9.8e-32  Score=262.94  Aligned_cols=229  Identities=17%  Similarity=0.171  Sum_probs=181.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~~  204 (464)
                      +|.+.+.||+|+||.||+|++.  +..||+|.+...... ......+.+| .+++.++||||+++++++...     ...
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN-RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            6888999999999999999984  889999998754222 2233456678 999999999999999988754     358


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--  264 (464)
                      |+||||+. ++|.+++...+.+++..+..++.|++.                  ||+++.++.+||+|||+++.....  
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  163 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD  163 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence            99999996 699999988888999999999999986                  999999999999999999876532  


Q ss_pred             -CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhc---------------c--------
Q 039021          265 -HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMH---------------L--------  318 (464)
Q Consensus       265 -~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~---------------~--------  318 (464)
                       .....++..|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.. ...               .        
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (337)
T cd07858         164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARR  243 (337)
T ss_pred             cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhH
Confidence             123348889999998865 56889999999999999999999999764310 000               0        


Q ss_pred             ----ccccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          319 ----KSVNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       319 ----~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                          ......+.+  ..+.+++++.++|++||+.+|++|||+.++++|.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~  294 (337)
T cd07858         244 YIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL  294 (337)
T ss_pred             HHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence                000000000  114578999999999999999999999999999553

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-31  Score=262.36  Aligned_cols=227  Identities=19%  Similarity=0.257  Sum_probs=177.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~  203 (464)
                      .+|.+.+.||+|+||.||+|.+.  |+.||+|.+...  ........+.+| .++++++||||+++++++...     ..
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            36889999999999999999984  889999998742  123344567778 999999999999999987654     35


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      .++||||+.+ +|.+++.. ..+++..+..++.|++.                  ||+++.++.+||+|||+++......
T Consensus        83 ~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          83 VYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             EEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence            7999999975 88888754 47999999999999986                  9999999999999999998754321


Q ss_pred             ------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc---------------c--
Q 039021          266 ------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK---------------S--  320 (464)
Q Consensus       266 ------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~---------------~--  320 (464)
                            ....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+. ......               .  
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL  240 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence                  12348899999998754 5688999999999999999999999976541 100000               0  


Q ss_pred             ------c--cCCC--Cc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 ------V--NFEP--KF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 ------~--~~~~--~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                            .  ...+  .+  ..+..++++.++|.+||+.+|++|||+.++++|-+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~  294 (336)
T cd07849         241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY  294 (336)
T ss_pred             hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence                  0  0000  00  01345788999999999999999999999999844

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=5.1e-31  Score=256.90  Aligned_cols=226  Identities=13%  Similarity=0.134  Sum_probs=175.3

Q ss_pred             cccccc--eeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          138 SMVEQG--VFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G--~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      ..||+|  +||+||++++  .|+.||+|++....... +..+.+.+| .+++.++||||++++++|..++..++||||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            456666  9999999998  48999999998653332 345678888 88999999999999999999999999999999


Q ss_pred             CCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-------
Q 039021          213 KGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-------  265 (464)
Q Consensus       213 ~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-------  265 (464)
                      +|+|.+++...  ..+++..+..++.|++.                  |||++.++.+|++|||.+.......       
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY  162 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence            99999999764  35899999999999986                  9999999999999998654332111       


Q ss_pred             ---CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC----------------
Q 039021          266 ---PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF----------------  323 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~----------------  323 (464)
                         ....++..|+|||++.+  ..++.++|||||||++|+|++|+.||..... ..........                
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (328)
T cd08226         163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR  242 (328)
T ss_pred             cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence               01125667999999976  3478999999999999999999999976541 1110000000                


Q ss_pred             ----------------------------CCCc-cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          324 ----------------------------EPKF-QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       324 ----------------------------~~~~-~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                                                  .... ....+++.+.+|+++||+.||++|||+.++++|.+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~  312 (328)
T cd08226         243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK  312 (328)
T ss_pred             hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence                                        0000 0123567899999999999999999999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.7e-31  Score=260.57  Aligned_cols=229  Identities=18%  Similarity=0.170  Sum_probs=185.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-----ce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-----EM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-----~~  204 (464)
                      +|++.+.||+|+||.||+|++.  +..||+|.+.... ........+.+| .+++.++||||+++++++....     .+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence            4788899999999999999984  7899999987642 123345667888 9999999999999999998775     78


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      |+||||+.+ +|.+++.....+++..++.++.|++.                  |||++.++.+||+|||++....... 
T Consensus        80 ~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          80 YIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             EEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence            999999984 89999988779999999999999986                  9999999999999999998766432 


Q ss_pred             -----CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccc--c--------------
Q 039021          266 -----PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSV--N--------------  322 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~--~--------------  322 (464)
                           ....++..|+|||++.+. .++.++||||||+++|+|++|..||...... .......  +              
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  238 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK  238 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence                 123478899999999887 8899999999999999999999999765511 1110000  0              


Q ss_pred             ---------C--CCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          323 ---------F--EPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       323 ---------~--~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                               .  ...+  ..+.+++++.++|.+||+.+|++|||+.+++.|.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~  292 (330)
T cd07834         239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL  292 (330)
T ss_pred             hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccH
Confidence                     0  0000  013368899999999999999999999999998643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=2e-31  Score=255.63  Aligned_cols=228  Identities=21%  Similarity=0.216  Sum_probs=177.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.++  ++.||+|.+...... ......+.+| +++++++||||+++++++.+++..++|||
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            5888899999999999999984  789999998754321 2334567778 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhhhhcccC---
Q 039021          210 YLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |++ ++|.+++....  .+++..+..++.||+.                  ||+++. ++.+||+|||+++......   
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~  160 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF  160 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence            996 48888886543  3577888889999976                  999985 4579999999998654321   


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--------------------cC
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--------------------NF  323 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--------------------~~  323 (464)
                      ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||.... .+.......                    ..
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
T PLN00009        161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSA  240 (294)
T ss_pred             ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhh
Confidence            23347899999998866 467899999999999999999999997654 111110000                    00


Q ss_pred             CCCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          324 EPKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       324 ~~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+.+       ..+..++++.+++.+||+.+|++||++.+++.|-+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~  286 (294)
T PLN00009        241 FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEY  286 (294)
T ss_pred             cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence            0000       01346889999999999999999999999998754

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-31  Score=253.74  Aligned_cols=225  Identities=20%  Similarity=0.251  Sum_probs=176.2

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      |++.+.||+|+||+||+|++.  ++.|++|.+...... . ......+| ..+++++ ||||+++++++.+++..++|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-W-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-h-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            567789999999999999984  788999998764322 1 12233456 8899998 9999999999999999999999


Q ss_pred             ecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CC
Q 039021          210 YLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~  267 (464)
                      |+ +|+|.+++....  .+++..+..++.|+++                  ||++++++.+||+|||+++......  ..
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  157 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD  157 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence            99 789999997654  7899999999999986                  9999999999999999998765432  23


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------c--cC
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------V--NF  323 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~--~~  323 (464)
                      ..++..|+|||++.. ..++.++|+||||+++|+|++|+.||..... .......                    .  ..
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07830         158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF  237 (283)
T ss_pred             CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence            348899999998854 5678999999999999999999999976541 1110000                    0  00


Q ss_pred             C----CC--ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          324 E----PK--FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       324 ~----~~--~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .    ..  ......+..+.+++++||+.||++|||+.|++.+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~  281 (283)
T cd07830         238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP  281 (283)
T ss_pred             cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCC
Confidence            0    00  00022368899999999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=3.7e-31  Score=253.83  Aligned_cols=233  Identities=14%  Similarity=0.123  Sum_probs=171.6

Q ss_pred             cccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCch--HH-H-----HHhHHHH-HHHHhcCCCceee
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHP--VK-M-----VLSAKDN-CKLRELRHPNILQ  193 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~--~~-~-----~~~~~~e-~~l~~l~hpnIv~  193 (464)
                      ++...+|.+.+.||+|+||.||+|.+.     +..+|+|+........  +. .     ......+ ..+..++|+||++
T Consensus         8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~   87 (294)
T PHA02882          8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK   87 (294)
T ss_pred             ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence            344457999999999999999999985     3466777644321110  00 0     0011122 4456779999999


Q ss_pred             eeceeeeCC----ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          194 FLGSIVLGE----EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       194 ~~~~~~~~~----~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      +++++....    ..++++|++.. ++.+.+......++..+..++.|+++                  |||++.++.+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~  166 (294)
T PHA02882         88 YYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY  166 (294)
T ss_pred             EEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEE
Confidence            999776543    34788898754 77777766556788889999999987                  99999999999


Q ss_pred             Eecchhhhhhccc----------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhcc-
Q 039021          252 IGEYWVQMFYEQI----------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHL-  318 (464)
Q Consensus       252 l~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~-  318 (464)
                      |+|||+|+.....          .....||+.|+|||++.+..++.++|||||||++|||++|+.||....  ...... 
T Consensus       167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~  246 (294)
T PHA02882        167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA  246 (294)
T ss_pred             EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence            9999999865321          112349999999999999999999999999999999999999998763  111111 


Q ss_pred             ----ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          319 ----KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       319 ----~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                          ...-.........+++++.+++..||..+|++||++.+|++.|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        247 KCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence                0000112223356789999999999999999999999998765

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=4.1e-31  Score=257.42  Aligned_cols=230  Identities=22%  Similarity=0.220  Sum_probs=180.8

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-CCceE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-GEEMI  205 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~~~~  205 (464)
                      ...+|++.+.||+|+||.||+|.+.  ++.||+|.+...... ......+..| .++++++||||++++++|.. ....+
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            4457999999999999999999974  889999988654322 2334567778 99999999999999999876 56789


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN  267 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~  267 (464)
                      +||||+ +++|.++++. ..+++..+..++.|+++                  ||++++++.+||+|||+++........
T Consensus        87 lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  164 (328)
T cd07856          87 FVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG  164 (328)
T ss_pred             EEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCC
Confidence            999999 4689888864 46888888889999876                  999999999999999999876544444


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hh---c------------------------c
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FM---H------------------------L  318 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~---~------------------------~  318 (464)
                      ..++..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ..   .                        .
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS  244 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh
Confidence            568889999998766 67899999999999999999999999765410 00   0                        0


Q ss_pred             ccccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          319 KSVNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       319 ~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .......+.  ..+.+++++.++|.+||+.+|++|||+.+++.+-+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~  290 (328)
T cd07856         245 LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY  290 (328)
T ss_pred             ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCc
Confidence            000000000  01346789999999999999999999999988753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.3e-31  Score=274.66  Aligned_cols=231  Identities=15%  Similarity=0.145  Sum_probs=170.1

Q ss_pred             cccccccccccceeeeeEEeEEe---CceEEEEE--------------eeccCCchHHHHHhHHHH-HHHHhcCCCceee
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR---GTWVVKTV--------------IKSHIYHPVKMVLSAKDN-CKLRELRHPNILQ  193 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~--------------~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~  193 (464)
                      .+|++++.||+|+||+||+|.++   +..+++|.              +.+...........+.+| .+|++++|||||+
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            46999999999999999999864   22222221              111111122344567889 9999999999999


Q ss_pred             eeceeeeCCceEEEEEecCCCChHHHHhhc-----cCCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          194 FLGSIVLGEEMILITEYLPKGNLKGILSKK-----VRLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       194 ~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      +++++.+.+..|+|+|++. ++|.+++...     ......+++.++.|++.                  |||++.++.+
T Consensus       228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~v  306 (501)
T PHA03210        228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKI  306 (501)
T ss_pred             EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence            9999999999999999996 4888777532     23345677888999976                  9999999999


Q ss_pred             eEecchhhhhhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC-CCCCc----cchhcccc-
Q 039021          251 KIGEYWVQMFYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL-QTNNS----FDFMHLKS-  320 (464)
Q Consensus       251 kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p-~~~~~----~~~~~~~~-  320 (464)
                      ||+|||+++.+....    ....||..|+|||++.+..++.++|||||||++|||++|..+ |....    .+....+. 
T Consensus       307 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~  386 (501)
T PHA03210        307 VLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDS  386 (501)
T ss_pred             EEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHh
Confidence            999999998765332    234599999999999999999999999999999999998754 43221    11110000 


Q ss_pred             -----ccC------------------C-----CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 -----VNF------------------E-----PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 -----~~~------------------~-----~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                           ...                  .     ..+....++..+.+++.+||+.||.+|||+.|++.|.+.
T Consensus       387 ~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f  457 (501)
T PHA03210        387 LSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF  457 (501)
T ss_pred             cccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence                 000                  0     000112356778889999999999999999999998664

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=4.7e-31  Score=251.92  Aligned_cols=225  Identities=19%  Similarity=0.212  Sum_probs=175.2

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc---CCCceeeeeceeeeCCc----
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL---RHPNILQFLGSIVLGEE----  203 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l---~hpnIv~~~~~~~~~~~----  203 (464)
                      |++.+.||+|+||.||+|+++  +..||+|.++..... ......+.+| .+++++   +||||+++++++...+.    
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            567789999999999999985  789999999854322 2223345556 666555   69999999999998776    


Q ss_pred             -eEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          204 -MILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       204 -~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                       ++++|||+.+ +|.+++...  ..+++..++.++.|++.                  ||+++.++.+||+|||++....
T Consensus        80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838          80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence             9999999985 899988763  35899999999999986                  9999999999999999998765


Q ss_pred             ccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccccc-----------------
Q 039021          263 QIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVN-----------------  322 (464)
Q Consensus       263 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~-----------------  322 (464)
                      ...  ....++..|+|||++.+..++.++|||||||++|+|++|..||..... +....+...                 
T Consensus       159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07838         159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR  238 (287)
T ss_pred             CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence            332  233478899999999998999999999999999999999999976551 111100000                 


Q ss_pred             --CC----CCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          323 --FE----PKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       323 --~~----~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                        ..    ...  ..+..++.+.+++.+||+.||++||++.+++.|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence              00    000  002356788999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=4.6e-31  Score=278.74  Aligned_cols=127  Identities=20%  Similarity=0.304  Sum_probs=115.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|.+.  ++.||+|+++............+..| .+++.++||||+++++++...+.+|||||
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE   84 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME   84 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence            6888999999999999999986  88999999986544445556778888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      |+.+++|.+++...+.+++..++.|+.||+.                  |||++.++.+||+|||+++
T Consensus        85 y~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          85 YLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            9999999999988788999999999999986                  9999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=6.9e-31  Score=253.69  Aligned_cols=227  Identities=17%  Similarity=0.183  Sum_probs=174.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-------
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-------  202 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-------  202 (464)
                      +|++.+.||+|+||.||+|.++  ++.||+|.+...... ......+.+| .++++++||||+++++++...+       
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            6889999999999999999984  889999998754221 1222344567 9999999999999999987654       


Q ss_pred             -ceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          203 -EMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       203 -~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                       ..++||||+.+ +|.+++... ..+++.++..++.|++.                  ||+++.++.+||+|||++....
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence             35999999975 888888654 47899999999999986                  9999999999999999998664


Q ss_pred             ccC-------CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccc-h---hccccccCC------
Q 039021          263 QIH-------PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-F---MHLKSVNFE------  324 (464)
Q Consensus       263 ~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~---~~~~~~~~~------  324 (464)
                      ...       ....++..|+|||++.+. .++.++||||||+++|+|++|..||...... .   +.......+      
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (310)
T cd07865         171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG  250 (310)
T ss_pred             CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence            322       123378899999988664 4788999999999999999999999765411 0   000000000      


Q ss_pred             ------------C---------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          325 ------------P---------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       325 ------------~---------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                                  +         .......+..+.+||.+||..||++|||++++++|-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~  308 (310)
T cd07865         251 VDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD  308 (310)
T ss_pred             ccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence                        0         000111356788999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.9e-31  Score=259.25  Aligned_cols=228  Identities=17%  Similarity=0.163  Sum_probs=181.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||++.+.  +..||+|.+.... ........+.+| .+|++++||||+++++++..+.      
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence            35888999999999999999874  8899999986532 223334567788 9999999999999999987654      


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+++||||+ +++|.+++.. ..+++..++.++.|+++                  ||+++.++.+||+|||++......
T Consensus        94 ~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  171 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE  171 (343)
T ss_pred             eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence            358999999 6799888864 57999999999999986                  999999999999999999877655


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccc--c------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSV--N------------------  322 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~--~------------------  322 (464)
                      .....+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||...... .......  .                  
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNY  251 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHH
Confidence            555568999999999876 45789999999999999999999999865411 1000000  0                  


Q ss_pred             --CCCCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 --FEPKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 --~~~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                        ..+..       ....+++.+.++|.+||+.||++|||+.+++.|-+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~  300 (343)
T cd07880         252 VKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY  300 (343)
T ss_pred             HHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence              00000       01356788999999999999999999999998754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=4.1e-31  Score=255.97  Aligned_cols=230  Identities=15%  Similarity=0.151  Sum_probs=179.2

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      .+.+++.+|.|+++.|+++..+++.||+|+++..... ......+.+| +++++++||||+++++++.+.+..+++|||+
T Consensus         3 ~~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~   81 (314)
T cd08216           3 LTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLM   81 (314)
T ss_pred             hhhhhHhhcCCceEEEEEecCCCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEecc
Confidence            4556677777777777777778999999999864322 3455678899 9999999999999999999999999999999


Q ss_pred             CCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------
Q 039021          212 PKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------  265 (464)
Q Consensus       212 ~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------  265 (464)
                      ++|+|.+++...  ..+++..+..++.|++.                  ||+++.++.+||+|||.+.......      
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~  161 (314)
T cd08216          82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV  161 (314)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence            999999999753  46899999999999986                  9999999999999999886543211      


Q ss_pred             ----CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCC--------------
Q 039021          266 ----PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFE--------------  324 (464)
Q Consensus       266 ----~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~--------------  324 (464)
                          ....++..|+|||++..  ..++.++|||||||++|||++|+.||..... ........+..              
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (314)
T cd08216         162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED  241 (314)
T ss_pred             ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence                12237788999999876  4588999999999999999999999986541 11000000000              


Q ss_pred             ------------------CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          325 ------------------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       325 ------------------~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                        .......+++++.+|+.+||..||++|||++++++|.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~  298 (314)
T cd08216         242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFF  298 (314)
T ss_pred             CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchH
Confidence                              000002245788999999999999999999999998664

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=5.8e-31  Score=257.55  Aligned_cols=228  Identities=17%  Similarity=0.183  Sum_probs=178.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeC--CceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLG--EEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~--~~~~  205 (464)
                      .+|++.+.||+|+||.||+|.+.  +..||+|.+...... ......+..| .+++++ +||||+++++++...  ..++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc-chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            36889999999999999999984  789999988653222 2233456678 999999 999999999998653  3689


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      +||||+.+ +|.+++... .+++..+..++.||+.                  ||+++.++.+||+|||+++......  
T Consensus        86 lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~  163 (337)
T cd07852          86 LVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN  163 (337)
T ss_pred             EEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence            99999974 999998765 8899999999999986                  9999999999999999998765322  


Q ss_pred             ------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc------------------
Q 039021          266 ------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK------------------  319 (464)
Q Consensus       266 ------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~------------------  319 (464)
                            ....|+..|+|||++.+ ..++.++||||||+++|+|++|+.||.+... ......                  
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (337)
T cd07852         164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP  243 (337)
T ss_pred             ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence                  12348899999998765 5678999999999999999999999976441 110000                  


Q ss_pred             ---------cccCCC--CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          320 ---------SVNFEP--KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       320 ---------~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                               ......  ....+.++.++.++|.+||+.||++|||+.+++++-+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~  297 (337)
T cd07852         244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPY  297 (337)
T ss_pred             hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChh
Confidence                     000000  0011336889999999999999999999999998743

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=5e-31  Score=253.84  Aligned_cols=227  Identities=18%  Similarity=0.240  Sum_probs=177.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|.++..... ......+.+| +++++++||||+++++++.+..      
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~   85 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK   85 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence            46888999999999999999984  889999999754221 1223456678 9999999999999999987654      


Q ss_pred             ----ceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          203 ----EMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       203 ----~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                          .+++||||+++ +|.+.+... ..+++..+..++.|++.                  ||++++++.+||+|||++.
T Consensus        86 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~  164 (302)
T cd07864          86 KDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR  164 (302)
T ss_pred             ccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence                78999999986 777777653 57899999999999986                  9999999999999999998


Q ss_pred             hhcccC----CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccc---cccCC----C-
Q 039021          260 FYEQIH----PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLK---SVNFE----P-  325 (464)
Q Consensus       260 ~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~---~~~~~----~-  325 (464)
                      ......    ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.... .......   .....    + 
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD  244 (302)
T ss_pred             cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence            765332    12236788999998865 457889999999999999999999997654 1111000   00000    0 


Q ss_pred             --------------------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          326 --------------------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       326 --------------------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                                          ......+|..+.+++.+||+.||++|||+.+++.+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                                00012468999999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.1e-31  Score=260.06  Aligned_cols=228  Identities=19%  Similarity=0.187  Sum_probs=182.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc-----
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE-----  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~-----  203 (464)
                      .+|.+.+.||+|+||.||+|++.  +..||+|++...... ......+.+| .++++++||||+++++++...+.     
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            46889999999999999999984  789999998754222 2334556778 99999999999999998876654     


Q ss_pred             -eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 -MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 -~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                       .++|+||+ +++|.+++.. ..+++..+..++.|+++                  ||++++++.+||+|||++......
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE  171 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence             89999999 5699998875 47999999999999986                  999999999999999999877655


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc---------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV---------------------  321 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~---------------------  321 (464)
                      .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... .....+..                     
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07851         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY  251 (343)
T ss_pred             ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHH
Confidence            445568999999998865 4678999999999999999999999976541 11111000                     


Q ss_pred             ------cCCCCcc--CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          322 ------NFEPKFQ--ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       322 ------~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                            .....+.  ....++++.++|.+||..||++|||+.+|+.|-+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~  300 (343)
T cd07851         252 IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY  300 (343)
T ss_pred             HHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence                  0000000  0235889999999999999999999999998854

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.1e-31  Score=259.04  Aligned_cols=226  Identities=18%  Similarity=0.207  Sum_probs=177.7

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|.+.+.||+|+||.||+|.+  +|+.||+|.+...... ......+.+| .++++++||||+++++++....      
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            3688889999999999999997  4889999998754222 2233456778 9999999999999999987543      


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+++||||+.. +|.+++.  ..+++..+..++.|+++                  ||+++.++.+||+|||+++.....
T Consensus        94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~  170 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE  170 (342)
T ss_pred             eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence            46999999974 7777653  36899999999999976                  999999999999999999876544


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc---------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV---------------------  321 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~---------------------  321 (464)
                      .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+ .........                     
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (342)
T cd07879         171 MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSY  250 (342)
T ss_pred             CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHH
Confidence            444558899999999876 568899999999999999999999998754 111111000                     


Q ss_pred             -cCCCCcc-------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          322 -NFEPKFQ-------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       322 -~~~~~~~-------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                       ...+..+       .+..++++.+||.+||+.||++||++.+++.|-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~  298 (342)
T cd07879         251 IKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP  298 (342)
T ss_pred             HhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence             0000011       124678899999999999999999999999883

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=4.2e-31  Score=251.55  Aligned_cols=226  Identities=23%  Similarity=0.255  Sum_probs=180.8

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |+..+.||+|+||.||+|+..  ++.||+|.+.... ........+..| .++++++||||+++++++.+.+..++||||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   79 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY   79 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence            456688999999999999984  8899999998653 123334566778 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          211 LPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      ++ ++|.+++... ..+++..+..++.|+++                  ||++++++.+||+|||+++......   ...
T Consensus        80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (282)
T cd07829          80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE  158 (282)
T ss_pred             cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence            98 4999999875 68999999999999987                  9999999999999999998765432   223


Q ss_pred             cCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------ccCCCC
Q 039021          269 ENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------VNFEPK  326 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~~~~~~  326 (464)
                      .++..|+|||++.+. .++.++|||||||++|||++|..||..... .......                    ....+.
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd07829         159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK  238 (282)
T ss_pred             ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence            367889999998776 889999999999999999999999976541 1100000                    000000


Q ss_pred             c-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          327 F-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       327 ~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +       ..+..+..+.+++++||..||++||++.+++.|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p  280 (282)
T cd07829         239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP  280 (282)
T ss_pred             cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence            0       0123578999999999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=6e-31  Score=250.66  Aligned_cols=226  Identities=19%  Similarity=0.222  Sum_probs=181.0

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |.+.+.||+|++|.||+|.+.  ++.+++|.+...... ......+.+| .++++++||||+++++++.+++..++||||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence            566789999999999999984  889999998765432 2334567778 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      +++ +|.+++.. ...+++..+..++.|++.                  ||+++.++.+||+|||.+.......   ...
T Consensus        80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~  158 (283)
T cd05118          80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY  158 (283)
T ss_pred             cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence            975 88888866 468999999999999986                  9999999999999999998775432   123


Q ss_pred             cCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccccc------------------------
Q 039021          269 ENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVN------------------------  322 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~------------------------  322 (464)
                      .++..|+|||++.+. .++.++||||||+++|+|++|+.||...+. +........                        
T Consensus       159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05118         159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP  238 (283)
T ss_pred             cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence            478899999998776 788999999999999999999999976551 111000000                        


Q ss_pred             --CCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          323 --FEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       323 --~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                        .....  ..+.++.++.++|.+||+.||.+||++.+++.|-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~  281 (283)
T cd05118         239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP  281 (283)
T ss_pred             cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence              00000  0134678999999999999999999999998764

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=1.3e-30  Score=242.10  Aligned_cols=205  Identities=15%  Similarity=0.151  Sum_probs=168.9

Q ss_pred             ceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCChHHH
Q 039021          143 GVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGI  219 (464)
Q Consensus       143 G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L~~~  219 (464)
                      |.||.||+++++  ++.||+|.+....        .+..| ..+....||||+++++++.+.+..++||||+++|+|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            899999999984  8899999997631        22344 555666899999999999999999999999999999999


Q ss_pred             HhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCCCCcccccccc
Q 039021          220 LSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIAS  281 (464)
Q Consensus       220 l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~  281 (464)
                      +.+...+++..+..++.|++.                  ||+++.++.+||+|||.+...........++..|+|||++.
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~  155 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG  155 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence            988778999999999999986                  99999999999999999887765555556788899999998


Q ss_pred             cCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCH-----HH
Q 039021          282 NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTF-----AA  356 (464)
Q Consensus       282 ~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~  356 (464)
                      +..++.++||||+|+++|||++|..|+..........    .....+ ..+++.+.++|.+||+.||++||++     .+
T Consensus       156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~  230 (237)
T cd05576         156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGINTH----TTLNIP-EWVSEEARSLLQQLLQFNPTERLGAGVAGVED  230 (237)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccc----cccCCc-ccCCHHHHHHHHHHccCCHHHhcCCCccchHH
Confidence            8889999999999999999999998876433111100    111222 4578999999999999999999996     66


Q ss_pred             HHHH
Q 039021          357 VIIT  360 (464)
Q Consensus       357 i~~~  360 (464)
                      ++.|
T Consensus       231 ~~~h  234 (237)
T cd05576         231 IKSH  234 (237)
T ss_pred             HHcC
Confidence            6554

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=7.5e-31  Score=257.19  Aligned_cols=226  Identities=18%  Similarity=0.167  Sum_probs=175.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-------  201 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-------  201 (464)
                      .+|.+.+.||.|+||.||+|.++  +..||+|.+.....   ...+.+.+| +++++++||||+++++++...       
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            47889999999999999999984  88999999876432   334567788 999999999999999877654       


Q ss_pred             -------CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccC-CCceeEecc
Q 039021          202 -------EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDE-GDHLKIGEY  255 (464)
Q Consensus       202 -------~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DF  255 (464)
                             ...++||||++ ++|.+++.. +.+++..+..++.||+.                  ||+++. ++.+||+||
T Consensus        82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df  159 (342)
T cd07854          82 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF  159 (342)
T ss_pred             cccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence                   35799999997 499888864 47999999999999986                  999974 457899999


Q ss_pred             hhhhhhcccC------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc-------
Q 039021          256 WVQMFYEQIH------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS-------  320 (464)
Q Consensus       256 G~a~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~-------  320 (464)
                      |+++......      ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||..... .......       
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (342)
T cd07854         160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR  239 (342)
T ss_pred             ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            9997653221      12247889999998754 5678899999999999999999999976541 1110000       


Q ss_pred             -----------------ccCCCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 -----------------VNFEPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 -----------------~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                       ....+..+    ...++.++.+||.+||+.||.+|||+.+++.|-+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~  302 (342)
T cd07854         240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY  302 (342)
T ss_pred             hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCc
Confidence                             00000000    1346789999999999999999999999998854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=6.4e-32  Score=257.52  Aligned_cols=224  Identities=18%  Similarity=0.171  Sum_probs=187.9

Q ss_pred             cccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          136 HSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       136 ~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      -.+.||+|.||+||-|+++  |+.||||++.+..... +....+++| .||++++||.||.+--.|++.+.+++|||-+.
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCCC-chHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence            3689999999999999985  9999999998766543 345789999 99999999999999999999999999999996


Q ss_pred             CCChHHHHh--hccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcccCC--C
Q 039021          213 KGNLKGILS--KKVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQIHP--N  267 (464)
Q Consensus       213 ~g~L~~~l~--~~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~~~~--~  267 (464)
                      | |..+.|-  ++++|++.....++.||+.                  |+|+.+.   -.+||||||+|+.+++...  .
T Consensus       647 G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs  725 (888)
T KOG4236|consen  647 G-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS  725 (888)
T ss_pred             c-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence            5 7777773  4689999999899999975                  8888654   3599999999999986543  4


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ..|||.|+|||++..+.|+..-|+||.|||+|--++|..||....  .+.+... ....|+-+...+++++.+||..+|+
T Consensus       726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA-aFMyPp~PW~eis~~AidlIn~LLq  804 (888)
T KOG4236|consen  726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA-AFMYPPNPWSEISPEAIDLINNLLQ  804 (888)
T ss_pred             hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcc-ccccCCCchhhcCHHHHHHHHHHHH
Confidence            459999999999999999999999999999999999999997644  2222221 1123333446789999999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLE  362 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~  362 (464)
                      ..-.+|.|..+.+.|.|
T Consensus       805 Vkm~kRysvdk~lsh~W  821 (888)
T KOG4236|consen  805 VKMRKRYSVDKSLSHPW  821 (888)
T ss_pred             HHHHHhcchHhhccchh
Confidence            99999999999888865

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-31  Score=248.34  Aligned_cols=226  Identities=21%  Similarity=0.330  Sum_probs=175.2

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHh--cCCCceeeeeceeeeCC----ceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE--LRHPNILQFLGSIVLGE----EMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~--l~hpnIv~~~~~~~~~~----~~~  205 (464)
                      +..+.+.||+|.||+||+|+|+|..||||++...     ++ +...+| ++.+.  |+|+||+.+++.-..++    .++
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr-----dE-~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR-----DE-RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             eeEEEEEecCccccceeeccccCCceEEEEeccc-----ch-hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            4677899999999999999999999999999852     22 344555 77765  59999999999776543    589


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------------hhcccCCCceeEecchhhh
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      ||++|-+.|||+|||.+ ..++.+..++++..+|.                          |||+.+++..-|+|+|+|.
T Consensus       286 LvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv  364 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  364 (513)
T ss_pred             EeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence            99999999999999987 48999999888888875                          9999999999999999997


Q ss_pred             hhcccC-------CCCcCCCCcccccccccCCC-----C-CcccchhHHHHHHHHHhC----------CCCCCCCc----
Q 039021          260 FYEQIH-------PNQENSQRNDNSSIASNVLD-----D-TKKDICSFGYIFYQMLEG----------KHLQTNNS----  312 (464)
Q Consensus       260 ~~~~~~-------~~~~gt~~y~aPE~~~~~~~-----~-~~~DvwSlGv~l~el~~g----------~~p~~~~~----  312 (464)
                      ......       ....||.+|||||++.+...     + ..+||||||.++||++..          ..||.+..    
T Consensus       365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP  444 (513)
T KOG2052|consen  365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP  444 (513)
T ss_pred             EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence            665432       23449999999999976432     1 358999999999999753          25776532    


Q ss_pred             -cchhcccc--ccCCCCccCCC----CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          313 -FDFMHLKS--VNFEPKFQISR----CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       313 -~~~~~~~~--~~~~~~~~~~~----~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                       .+.+..+.  ...+|..+...    +-..+.++|+.||..+|..|.|+=-|.+.|.++.
T Consensus       445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence             33333322  23344444321    2246778999999999999999988888887764

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.2e-30  Score=256.01  Aligned_cols=230  Identities=19%  Similarity=0.201  Sum_probs=180.6

Q ss_pred             ccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------  201 (464)
                      ..+|.+.+.||+|+||.||+|.+  .++.||+|.+...... ......+.+| .++++++||||+++++++...      
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   94 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence            35799999999999999999987  3889999999754222 2234557778 999999999999999988643      


Q ss_pred             CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          202 EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ...++++|++ +++|.+++..+ .+++..+..++.|+++                  ||++++++.+||+|||+++....
T Consensus        95 ~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877          95 NDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  172 (345)
T ss_pred             ccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence            3478888887 67998887654 6999999999999986                  99999999999999999987655


Q ss_pred             cCCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--------------------
Q 039021          264 IHPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--------------------  321 (464)
Q Consensus       264 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--------------------  321 (464)
                      ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||..... ........                    
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (345)
T cd07877         173 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN  252 (345)
T ss_pred             cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHH
Confidence            5445568999999998866 5688999999999999999999999976441 11000000                    


Q ss_pred             -----cCCC--Ccc--CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          322 -----NFEP--KFQ--ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       322 -----~~~~--~~~--~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                           ...+  .+.  ....++++.++|.+||+.||.+|||+.+++.|-+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f  303 (345)
T cd07877         253 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF  303 (345)
T ss_pred             HHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhh
Confidence                 0000  000  02357889999999999999999999999999653

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=2.6e-30  Score=286.67  Aligned_cols=222  Identities=22%  Similarity=0.282  Sum_probs=173.0

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+...+.||+|+||.||+|++  .+..||+|.+.....       ....| +.+++++|||||+++++|.+.+..++|||
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            466678999999999999997  488999999875321       12345 78999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh---------------------hhcccCCCceeEecchhhhhhcccCCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR---------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~---------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~  268 (464)
                      |+++|+|.++++   .+++.++..++.|+++                     ||+++.++..++. ||.+...... ...
T Consensus       764 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-~~~  838 (968)
T PLN00113        764 YIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-TKC  838 (968)
T ss_pred             CCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-CCc
Confidence            999999999996   4899999999999986                     9999988887775 6665543322 233


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---cchhcccc---ccC------CCCcc-----CCC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLKS---VNF------EPKFQ-----ISR  331 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~~---~~~------~~~~~-----~~~  331 (464)
                      .||+.|||||++.+..++.++|||||||++|||++|+.||....   .....+..   ...      .+...     ...
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  918 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQN  918 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHH
Confidence            58899999999999999999999999999999999999985432   11111100   000      01110     011


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ...++.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       919 ~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        919 EIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            23467789999999999999999999999988743

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-31  Score=241.27  Aligned_cols=228  Identities=13%  Similarity=0.186  Sum_probs=192.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|.+...||+|+|++|.+++..  .+.+|+|++++...++.+.......| .+..+. +||++|-++.+|+....+++|
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            36889999999999999999974  78999999999888877778888888 777665 799999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~  266 (464)
                      .||++||+|--++++...++++.++.|...|+-                  |+|+|..|++||.|+|+++.--   +...
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~ts  409 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTS  409 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccc
Confidence            999999999877777789999999999888864                  9999999999999999998643   4456


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--------cchhccccccCCCCccCCCCcHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--------FDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      +.+|||.|.|||++.+..|.+.+|+|+|||+|+||+.|+.||.-..        .+.+..++.......| ..++-.+..
T Consensus       410 tfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqirip-rslsvkas~  488 (593)
T KOG0695|consen  410 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIP-RSLSVKASH  488 (593)
T ss_pred             cccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccc-ceeehhhHH
Confidence            7789999999999999999999999999999999999999996321        2233333333233333 557888899


Q ss_pred             HHHHHcccCCCCCCC------HHHHHHH
Q 039021          339 LIAQCTNKDPSKRPT------FAAVIIT  360 (464)
Q Consensus       339 li~~cl~~dp~~Rpt------~~~i~~~  360 (464)
                      +++.-|.+||.+|..      ++++..|
T Consensus       489 vlkgflnkdp~erlgc~~~~g~~dik~h  516 (593)
T KOG0695|consen  489 VLKGFLNKDPKERLGCRPQTGFSDIKSH  516 (593)
T ss_pred             HHHHhhcCCcHHhcCCCcccchhhhhcc
Confidence            999999999999953      5666554

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=7.1e-31  Score=255.21  Aligned_cols=226  Identities=15%  Similarity=0.170  Sum_probs=184.6

Q ss_pred             cccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |..++.||-|+||+|.+++.  ....+|.|.+.+.......+....+.| .||...+.+-||+||..|++.+.+|+||||
T Consensus       631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdY  710 (1034)
T KOG0608|consen  631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY  710 (1034)
T ss_pred             eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEec
Confidence            67789999999999999985  467899999998665566777888999 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--------
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--------  264 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--------  264 (464)
                      ++|||+-.+|-+.+.|++..++.|+..+..                  |||||.+|++||.||||++-+...        
T Consensus       711 IPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~  790 (1034)
T KOG0608|consen  711 IPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQE  790 (1034)
T ss_pred             cCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccC
Confidence            999999999988899999999999998875                  999999999999999998643210        


Q ss_pred             -------------------------------------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC
Q 039021          265 -------------------------------------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL  307 (464)
Q Consensus       265 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p  307 (464)
                                                           .....||+.|+|||++....|+..+|+||.|||||||+.|+.|
T Consensus       791 gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~p  870 (1034)
T KOG0608|consen  791 GDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPP  870 (1034)
T ss_pred             CCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCC
Confidence                                                 0011299999999999999999999999999999999999999


Q ss_pred             CCCCccchhccccccCCC--Ccc-CCCCcHHHHHHHHHHcccCCCCCCC---HHHHHHH
Q 039021          308 QTNNSFDFMHLKSVNFEP--KFQ-ISRCPNRLKQLIAQCTNKDPSKRPT---FAAVIIT  360 (464)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~li~~cl~~dp~~Rpt---~~~i~~~  360 (464)
                      |..........+..+.+-  .++ ...+++++.++|.++. .+++.|..   +++|-.|
T Consensus       871 f~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaH  928 (1034)
T KOG0608|consen  871 FLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAH  928 (1034)
T ss_pred             ccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcC
Confidence            988763322222222221  111 2568999999998765 35677763   4556665

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.6e-31  Score=239.50  Aligned_cols=226  Identities=19%  Similarity=0.173  Sum_probs=183.0

Q ss_pred             cccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEec
Q 039021          136 HSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       136 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      ..+.||+|+|+.|-.|..  .|..+|||++.+..   .....++.+| +++.++ .|+||++++++|+++..+|||||-+
T Consensus        82 t~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm  158 (463)
T KOG0607|consen   82 TSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKM  158 (463)
T ss_pred             HHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecc
Confidence            357899999999999986  59999999998752   3334566667 888888 6999999999999999999999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC---ceeEecchhhhhhcc-------
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD---HLKIGEYWVQMFYEQ-------  263 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~---~~kl~DFG~a~~~~~-------  263 (464)
                      .||+|..+|.++..+++.++.+++.+|+.                  |||-.+..   -+|||||.+..-+..       
T Consensus       159 ~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa  238 (463)
T KOG0607|consen  159 RGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA  238 (463)
T ss_pred             cCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence            99999999999999999999999999986                  99976554   389999988754331       


Q ss_pred             ---cCCCCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc---------------cchhcccc
Q 039021          264 ---IHPNQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---------------FDFMHLKS  320 (464)
Q Consensus       264 ---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---------------~~~~~~~~  320 (464)
                         ...+.+|+..|||||+..     ...|+.++|.||||||||-|++|..||.+.-               .+.+...+
T Consensus       239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI  318 (463)
T KOG0607|consen  239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI  318 (463)
T ss_pred             CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence               112345999999999763     2578999999999999999999999998642               11122223


Q ss_pred             ccCCCCccC---CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          321 VNFEPKFQI---SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       321 ~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ......||.   ..+|.+.++++..+|..|+.+|.++.++++|.|.-
T Consensus       319 QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~  365 (463)
T KOG0607|consen  319 QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ  365 (463)
T ss_pred             hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence            333455554   44789999999999999999999999999987643

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=3e-30  Score=249.34  Aligned_cols=228  Identities=22%  Similarity=0.300  Sum_probs=174.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|.+....... .....+.+| +++++++||||+++++++.+..      
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            47999999999999999999984  7899999987543221 112345678 9999999999999999886533      


Q ss_pred             --ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          203 --EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       203 --~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                        .+++||||+.+ +|...+.. ...+++..+..++.|+++                  ||++++++.+||+|||+++..
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence              46999999975 77777754 457999999999999986                  999999999999999999865


Q ss_pred             cccCC--------------CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---c-
Q 039021          262 EQIHP--------------NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---V-  321 (464)
Q Consensus       262 ~~~~~--------------~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---~-  321 (464)
                      .....              ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+. .......   . 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT  245 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            43211              1126788999998765 4588999999999999999999999976541 1100000   0 


Q ss_pred             ----------------------cCCCCcc--CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          322 ----------------------NFEPKFQ--ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       322 ----------------------~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                                            ..++...  ....++.+.+++.+||+.||++|||+.+++.|-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~  309 (311)
T cd07866         246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP  309 (311)
T ss_pred             CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence                                  0000000  023457889999999999999999999998763

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=6.2e-30  Score=249.71  Aligned_cols=228  Identities=17%  Similarity=0.149  Sum_probs=177.2

Q ss_pred             ccccccccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeC----C
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLG----E  202 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~----~  202 (464)
                      +|++.+.||+|+||.||++++.    +..||+|.+.... ........+.+| ++++++ +||||+++++.+...    .
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            4778899999999999999984    5689999987532 122234556778 899998 599999999975432    4


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .++++|||+. ++|.+++.....+++..++.++.||+.                  |||++.++.+||+|||+++.....
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            5789999986 599999988788999999999999986                  999999999999999999865422


Q ss_pred             C-------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc----------------
Q 039021          265 H-------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK----------------  319 (464)
Q Consensus       265 ~-------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~----------------  319 (464)
                      .       ....|+..|+|||++.+ ..++.++|||||||++|+|++|+.||...+. ......                
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG  238 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence            1       12348999999998765 5689999999999999999999999976541 100000                


Q ss_pred             -----------cccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          320 -----------SVNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       320 -----------~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                 .......+  .....+..+.+|+.+||+.||++|||+.+++.+-+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~  294 (332)
T cd07857         239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY  294 (332)
T ss_pred             hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence                       00000111  11335789999999999999999999999998854

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.9e-31  Score=258.17  Aligned_cols=222  Identities=18%  Similarity=0.185  Sum_probs=186.6

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHH-HhcCCCceeeeeceeeeCCceEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKL-RELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l-~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...|.+...+|.|+|+.|..+.+.  ++..++|++.+..       ..-.+| .++ ..-+||||+++.+++.++.+.|+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~  393 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL  393 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceeee
Confidence            345888889999999999999984  8899999998741       123345 444 44489999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcc-cCCCceeEecchhhhhhcccCCC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQ-DEGDHLKIGEYWVQMFYEQIHPN  267 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill-~~~~~~kl~DFG~a~~~~~~~~~  267 (464)
                      |||++.||-|.+.+.....+. .++..|+.||+.                  |||+ ++.++++|+|||.++.......+
T Consensus       394 v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~t  472 (612)
T KOG0603|consen  394 VMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDT  472 (612)
T ss_pred             eehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcc
Confidence            999999999998888765555 788889999976                  9999 58899999999999998877666


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      .+-|..|.|||++....||.++||||||++||+|++|..||.....+ .+...+  ..+.+. ..+|.++++|+.+||+.
T Consensus       473 p~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i--~~~~~s-~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  473 PALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI--QMPKFS-ECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             cchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh--cCCccc-cccCHHHHHHHHHhccC
Confidence            67899999999999999999999999999999999999999876633 222221  233333 66899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEE  363 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~  363 (464)
                      ||.+||++.++..|-|.
T Consensus       550 dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  550 DPALRLGADEIGAHPWF  566 (612)
T ss_pred             ChhhCcChhhhccCcch
Confidence            99999999999999876

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-30  Score=245.31  Aligned_cols=227  Identities=21%  Similarity=0.275  Sum_probs=179.2

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHh--cCCCceeeeeceeeeCC----ceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE--LRHPNILQFLGSIVLGE----EMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~--l~hpnIv~~~~~~~~~~----~~~  205 (464)
                      ...+.+.||+|+||.||+|+.+++.||||++..      ...+.+.+| +|.+.  ++|+||++++++-....    .++
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             chhhHHHhhcCccceeehhhccCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            366778999999999999999999999999984      556788999 88775  48999999999877655    789


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh---------------------------hhcccCCCceeEecchhh
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR---------------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~---------------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ||+||-+.|+|.+||+.+ .++|.+..+++..+++                           |||+..+++.-|+|||+|
T Consensus       285 LVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             EEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            999999999999999876 7999999999888876                           999999999999999999


Q ss_pred             hhhcccCC-----CCcCCCCcccccccccCC-CC-----CcccchhHHHHHHHHHhCCC------------CCCCC---c
Q 039021          259 MFYEQIHP-----NQENSQRNDNSSIASNVL-DD-----TKKDICSFGYIFYQMLEGKH------------LQTNN---S  312 (464)
Q Consensus       259 ~~~~~~~~-----~~~gt~~y~aPE~~~~~~-~~-----~~~DvwSlGv~l~el~~g~~------------p~~~~---~  312 (464)
                      ..+.....     ...||.+|||||++.+.. +.     .+.||||+|.+||||+++..            ||...   .
T Consensus       364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h  443 (534)
T KOG3653|consen  364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH  443 (534)
T ss_pred             EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence            88764322     344999999999987632 22     36899999999999998643            23211   0


Q ss_pred             --cchhcc--ccccCCCCccC----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          313 --FDFMHL--KSVNFEPKFQI----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       313 --~~~~~~--~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                        .+.+..  .....+|.++.    ..-..-+++.+..||+.||+.|.|+.-+.++++.+..
T Consensus       444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence              111111  11223444432    2234578899999999999999999999998887743

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=9.2e-29  Score=229.28  Aligned_cols=215  Identities=25%  Similarity=0.306  Sum_probs=177.9

Q ss_pred             eeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCChHHHH
Q 039021          144 VFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL  220 (464)
Q Consensus       144 ~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L~~~l  220 (464)
                      +||.||+|.+.  ++.+++|++........  ...+.+| +.+++++|+||+++++.+......+++|||+++++|.+++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            58999999985  68999999986432211  5678889 9999999999999999999999999999999999999999


Q ss_pred             hhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCcCCCCccccccc
Q 039021          221 SKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQENSQRNDNSSIA  280 (464)
Q Consensus       221 ~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~  280 (464)
                      .....+++..+..++.++++                  ||+++.++.++|+|||.+......  .....++..|++||.+
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~  158 (244)
T smart00220       79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVL  158 (244)
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHH
Confidence            87666899999999999976                  999999999999999999887653  3344589999999999


Q ss_pred             ccCCCCCcccchhHHHHHHHHHhCCCCCCC-CccchhccccccCCCCccCC--CCcHHHHHHHHHHcccCCCCCCCHHHH
Q 039021          281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQIS--RCPNRLKQLIAQCTNKDPSKRPTFAAV  357 (464)
Q Consensus       281 ~~~~~~~~~DvwSlGv~l~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~cl~~dp~~Rpt~~~i  357 (464)
                      .+..++.++||||||+++|+|++|..||.. ....................  .++.++.+++.+||..+|++||++.++
T Consensus       159 ~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  238 (244)
T smart00220      159 LGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEA  238 (244)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHH
Confidence            988899999999999999999999999977 33222222222222222211  178999999999999999999999999


Q ss_pred             HHH
Q 039021          358 IIT  360 (464)
Q Consensus       358 ~~~  360 (464)
                      +++
T Consensus       239 ~~~  241 (244)
T smart00220      239 LQH  241 (244)
T ss_pred             hhC
Confidence            875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-29  Score=210.57  Aligned_cols=227  Identities=19%  Similarity=0.250  Sum_probs=180.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|.-.++||+|.||+|++|+.+  ++.||+|.++.+... +..-....+| .+|+.++|+|||+++++...+..+.+|+|
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd-egvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC-CCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            4556689999999999999974  789999999865322 3334456677 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCC---
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN---  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~---  267 (464)
                      ||.. +|..+... ++.++.+.++.++.|+++                  |+|++.+|.+||+|||+|+.++-....   
T Consensus        82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysa  160 (292)
T KOG0662|consen   82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA  160 (292)
T ss_pred             HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence            9976 89888865 689999999999999987                  999999999999999999988744322   


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHh-CCCCCCCCc--cchhcccc-ccC-----C------------C
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLE-GKHLQTNNS--FDFMHLKS-VNF-----E------------P  325 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~--~~~~~~~~-~~~-----~------------~  325 (464)
                      ..-|..|.+|.++.+ +.|+...|+||-||++.|+.. |++.|++.+  .+...... .+.     .            |
T Consensus       161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp  240 (292)
T KOG0662|consen  161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP  240 (292)
T ss_pred             eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence            237899999999887 678999999999999999997 888888876  22211111 000     0            1


Q ss_pred             CccC--------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          326 KFQI--------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       326 ~~~~--------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .++.        +.++..-++++.++|.-+|.+|.++++.++|.
T Consensus       241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp  284 (292)
T KOG0662|consen  241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP  284 (292)
T ss_pred             CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence            1111        22334567899999999999999999998874

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.6e-30  Score=237.77  Aligned_cols=229  Identities=15%  Similarity=0.154  Sum_probs=182.0

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-C-C----ceeeeeceee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-H-P----NILQFLGSIV  199 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-h-p----nIv~~~~~~~  199 (464)
                      ....+|.+...+|+|.||.|-.+.++  +..||+|+++.-    .+..+..+-| ++|+++. + |    -+|++.++|.
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd  161 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD  161 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence            33568999999999999999999985  789999999852    4445556667 8899883 2 2    3888999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccC-------------
Q 039021          200 LGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDE-------------  246 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~-------------  246 (464)
                      -.++.+||+|.+ |-|+++++.++  .+++...++.+++|+++                  |||+.+             
T Consensus       162 yrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~  240 (415)
T KOG0671|consen  162 YRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV  240 (415)
T ss_pred             ccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence            999999999988 55999999875  57899999999999987                  888632             


Q ss_pred             -------CCceeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cc---h
Q 039021          247 -------GDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FD---F  315 (464)
Q Consensus       247 -------~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~---~  315 (464)
                             +..+||+|||.|++..+.......|..|.|||++.+-+++.++||||+||||+|+.+|...|...+ .+   .
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaM  320 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAM  320 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHH
Confidence                   234899999999999888878889999999999999999999999999999999999999887654 11   1


Q ss_pred             hccccccC-----------------CCCccC------------------------CCCcHHHHHHHHHHcccCCCCCCCH
Q 039021          316 MHLKSVNF-----------------EPKFQI------------------------SRCPNRLKQLIAQCTNKDPSKRPTF  354 (464)
Q Consensus       316 ~~~~~~~~-----------------~~~~~~------------------------~~~~~~~~~li~~cl~~dp~~Rpt~  354 (464)
                      +..+....                 +..|+.                        +.--.++.+||++||..||.+|+|+
T Consensus       321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl  400 (415)
T KOG0671|consen  321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL  400 (415)
T ss_pred             HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence            11111000                 111110                        0011368899999999999999999


Q ss_pred             HHHHHHHH
Q 039021          355 AAVIITLE  362 (464)
Q Consensus       355 ~~i~~~l~  362 (464)
                      +|++.|..
T Consensus       401 ~EAL~HpF  408 (415)
T KOG0671|consen  401 REALSHPF  408 (415)
T ss_pred             HHHhcCHH
Confidence            99999864

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=7.3e-30  Score=229.42  Aligned_cols=229  Identities=16%  Similarity=0.159  Sum_probs=178.4

Q ss_pred             ccccccccccceeeeeEEeEEe------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-CCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-GEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~~~  204 (464)
                      .|+..+.||+|.||.||+|..+      ...+|+|.++..... ........+| .+++.++|||||.+..+|.. +..+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~-tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG-TGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC-CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            5889999999999999999652      347899999865321 2233456778 99999999999999999988 7889


Q ss_pred             EEEEEecCCCChHHHHhhc-----cCCCHHHHHHHHHHHHh------------------hhcccCC----CceeEecchh
Q 039021          205 ILITEYLPKGNLKGILSKK-----VRLDLPTALRYALDIAR------------------NLLQDEG----DHLKIGEYWV  257 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~------------------Nill~~~----~~~kl~DFG~  257 (464)
                      ++++||.++ ||.++|+-+     ..++...+..+++||+.                  |||+..+    |.|||+|||+
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence            999999998 999999632     57899999999999986                  9999777    8999999999


Q ss_pred             hhhhcccCCC------CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcc----------c-
Q 039021          258 QMFYEQIHPN------QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL----------K-  319 (464)
Q Consensus       258 a~~~~~~~~~------~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~----------~-  319 (464)
                      ++.+.+....      ..-|+.|+|||.+.+ ..|+.+.||||.|||..||++-++.|.+........          + 
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf  262 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF  262 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence            9998764322      236899999999988 779999999999999999999988776543111000          0 


Q ss_pred             -cccCC-----------CCcc------------C----------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          320 -SVNFE-----------PKFQ------------I----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       320 -~~~~~-----------~~~~------------~----------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                       ..+.+           |.++            .          ..-++...+|+.++|..||.+|.|+.+.++|.-.
T Consensus       263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF  340 (438)
T KOG0666|consen  263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF  340 (438)
T ss_pred             HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence             00000           1110            0          1123458899999999999999999999998643

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.96  E-value=2.2e-29  Score=261.42  Aligned_cols=223  Identities=20%  Similarity=0.223  Sum_probs=169.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--------  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--------  200 (464)
                      .+|+.++.||+||||.||+++.+  |+.||||.|....  .......+.+| ..|++|+|||||++|..+.+        
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            35788899999999999999984  9999999998754  45556677788 99999999999998732210        


Q ss_pred             ----------------------------------------------------------------------C---------
Q 039021          201 ----------------------------------------------------------------------G---------  201 (464)
Q Consensus       201 ----------------------------------------------------------------------~---------  201 (464)
                                                                                            +         
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                  0         


Q ss_pred             --------------------------------CceEEEEEecCCCChHHHHhhccCC-CHHHHHHHHHHHHh--------
Q 039021          202 --------------------------------EEMILITEYLPKGNLKGILSKKVRL-DLPTALRYALDIAR--------  240 (464)
Q Consensus       202 --------------------------------~~~~lv~E~~~~g~L~~~l~~~~~l-~~~~~~~~~~qi~~--------  240 (464)
                                                      -.+||-||||+.-.|.++++.+... .....+++++||+.        
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~  716 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ  716 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence                                            1258899999997777887765444 47788999999987        


Q ss_pred             ----------hhcccCCCceeEecchhhhhhc----c-----------------cCCCCcCCCCcccccccccC---CCC
Q 039021          241 ----------NLLQDEGDHLKIGEYWVQMFYE----Q-----------------IHPNQENSQRNDNSSIASNV---LDD  286 (464)
Q Consensus       241 ----------Nill~~~~~~kl~DFG~a~~~~----~-----------------~~~~~~gt~~y~aPE~~~~~---~~~  286 (464)
                                ||++|+++.|||+|||+|+...    .                 ..+...||..|+|||++.+.   .|+
T Consensus       717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn  796 (1351)
T KOG1035|consen  717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN  796 (1351)
T ss_pred             ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence                      9999999999999999998822    0                 11223399999999999774   599


Q ss_pred             CcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCc---cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          287 TKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKF---QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       287 ~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .|+|+|||||+++||+.   ||....  ...+.....+.-|..   ..+.+ +.-..+|+++++.||++|||+.|++..
T Consensus       797 ~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~-~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  797 SKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEH-PEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             chhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccc-hHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence            99999999999999985   565433  233333332222221   21333 345789999999999999999998864

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.96  E-value=2.5e-29  Score=248.80  Aligned_cols=228  Identities=17%  Similarity=0.220  Sum_probs=173.2

Q ss_pred             cccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------ceEE
Q 039021          136 HSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------EMIL  206 (464)
Q Consensus       136 ~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------~~~l  206 (464)
                      ..+.||+|+||.||+++.+  |+.||||.++...  .....+....| ++|++|+|||||+++++-++..      ...+
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            3478999999999999975  9999999998753  23345667788 9999999999999999776543      4689


Q ss_pred             EEEecCCCChHHHHhh---ccCCCHHHHHHHHHHHHh------------------hhccc--CCC--ceeEecchhhhhh
Q 039021          207 ITEYLPKGNLKGILSK---KVRLDLPTALRYALDIAR------------------NLLQD--EGD--HLKIGEYWVQMFY  261 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~------------------Nill~--~~~--~~kl~DFG~a~~~  261 (464)
                      |||||.||||+.++++   ...|++.+.+.++.+++.                  ||++-  .+|  .-||+|||.|+.+
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel  174 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL  174 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence            9999999999999975   367999999999999975                  88873  333  3899999999999


Q ss_pred             cccC--CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-----cchhcccc-------------
Q 039021          262 EQIH--PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-----FDFMHLKS-------------  320 (464)
Q Consensus       262 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-----~~~~~~~~-------------  320 (464)
                      .+..  ....||..|.+||+... ..|+..+|.|||||++|+.+||..||....     .+.+....             
T Consensus       175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~  254 (732)
T KOG4250|consen  175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQE  254 (732)
T ss_pred             CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeec
Confidence            8655  34459999999999984 889999999999999999999999996543     11222111             


Q ss_pred             -ccCCCCc----cC-CCCc----HHHHHHHHHHcccCCCCCC--CHHHHHHHHHHHH
Q 039021          321 -VNFEPKF----QI-SRCP----NRLKQLIAQCTNKDPSKRP--TFAAVIITLEEVS  365 (464)
Q Consensus       321 -~~~~~~~----~~-~~~~----~~~~~li~~cl~~dp~~Rp--t~~~i~~~l~~~~  365 (464)
                       .+.+..+    |. ...+    ..+...+..+|..+|.+|-  .+.+....+..+.
T Consensus       255 ~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL  311 (732)
T KOG4250|consen  255 EENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL  311 (732)
T ss_pred             ccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence             1111111    11 1122    2344566778888999998  6766666666654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=6e-29  Score=229.79  Aligned_cols=239  Identities=21%  Similarity=0.294  Sum_probs=196.4

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeecee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSI  198 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~  198 (464)
                      +.....+++....+-+|.||.||+|.|+       .+.|.+|.++..  ..+-+...+..| -.+..+.|||+..+.+++
T Consensus       279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            4444456778888999999999999774       456778888764  335566778888 889999999999999988


Q ss_pred             eeC-CceEEEEEecCCCChHHHHhh--------ccCCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          199 VLG-EEMILITEYLPKGNLKGILSK--------KVRLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       199 ~~~-~~~~lv~E~~~~g~L~~~l~~--------~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      .++ ...++++.++.-|+|..+|..        .+.++..+...++.|++.                  |++||+.-.+|
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk  436 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK  436 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence            765 567888999999999999972        145667777888888864                  99999999999


Q ss_pred             EecchhhhhhcccCCC-----CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCC
Q 039021          252 IGEYWVQMFYEQIHPN-----QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFE  324 (464)
Q Consensus       252 l~DFG~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~  324 (464)
                      |+|=.+++.+-.....     ......||+||-+....|+.++|||||||+||||+| |+.||...+ .+...+...+.+
T Consensus       437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR  516 (563)
T KOG1024|consen  437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR  516 (563)
T ss_pred             eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce
Confidence            9999999987644332     225779999999999999999999999999999999 999999888 555566666666


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .. ++-+||.++..+|..||+..|++||+++++..-|..+...+
T Consensus       517 la-QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql  559 (563)
T KOG1024|consen  517 LA-QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL  559 (563)
T ss_pred             ec-CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence            55 44789999999999999999999999999999888775443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=3.4e-29  Score=245.27  Aligned_cols=225  Identities=18%  Similarity=0.234  Sum_probs=187.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|+++.++|.|.||.||++++.  +...|+|+++-.-   .+...-+.+| -+++..+|||||-++|.+...+.++|.||
T Consensus        16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             chhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            6889999999999999999984  8999999998632   3445566778 88999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~  268 (464)
                      ||.||+|.+..+-.+++++.++...++..++                  |||+++.|.+|++|||.+..+...   ...+
T Consensus        93 ycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krksf  172 (829)
T KOG0576|consen   93 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSF  172 (829)
T ss_pred             ecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcc
Confidence            9999999999988899999999888888765                  999999999999999999877643   2345


Q ss_pred             cCCCCccccccc---ccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc-cC-CCCcc-CCCCcHHHHHHHH
Q 039021          269 ENSQRNDNSSIA---SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV-NF-EPKFQ-ISRCPNRLKQLIA  341 (464)
Q Consensus       269 ~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~-~~-~~~~~-~~~~~~~~~~li~  341 (464)
                      .||++|||||+.   ..+.|+.++|||++|++..|+---+.|-.... .+....... ++ +|... ...+++.+.+|++
T Consensus       173 iGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK  252 (829)
T KOG0576|consen  173 IGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVK  252 (829)
T ss_pred             cCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHH
Confidence            599999999986   35789999999999999999988777755544 333333322 11 22222 2557899999999


Q ss_pred             HHcccCCCCCCCHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .+|-++|.+|||+..++.|
T Consensus       253 ~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  253 GALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             HHhcCCCccCCChhhheec
Confidence            9999999999999888775

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=2.8e-29  Score=219.56  Aligned_cols=230  Identities=17%  Similarity=0.193  Sum_probs=175.6

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--------
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--------  201 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--------  201 (464)
                      .|.-...||+|.||+||+|+.+  |+.||+|.+--+.-. +..-....+| .+|..|+|+|++.++.+|...        
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            4777789999999999999984  778888776532111 1122234566 999999999999999988642        


Q ss_pred             CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      ..+|+||.+|++ ||.-+|... .+++..++..++.++..                  |+||+.+|.+||+|||+++.+.
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs  175 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS  175 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence            348999999998 999999765 78999999999998865                  9999999999999999998765


Q ss_pred             ccCC-------CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc---ccC-C-----
Q 039021          263 QIHP-------NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS---VNF-E-----  324 (464)
Q Consensus       263 ~~~~-------~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~---~~~-~-----  324 (464)
                      ....       ...-|..|++||.+.+ ..|+.+.|||.-||++.||.+|.+-+.+.. .+.+..+.   ... +     
T Consensus       176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~  255 (376)
T KOG0669|consen  176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN  255 (376)
T ss_pred             cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence            3321       1124899999999877 789999999999999999999998887665 22221110   000 0     


Q ss_pred             ------------CCccC------------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          325 ------------PKFQI------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       325 ------------~~~~~------------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                                  ++.+.            -.-.++..+|+.++|..||.+|+++++++.|-...
T Consensus       256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence                        00110            01135788999999999999999999999997655

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=4.8e-28  Score=205.96  Aligned_cols=204  Identities=12%  Similarity=0.180  Sum_probs=159.2

Q ss_pred             ccccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCC
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ++..+.+...+..||+|+||.|-+-++  .|...|+|.+..... ...+ .+...|  -+++...+|++|.+||.....+
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q-~r~L~dldi~~r~~~CPf~V~FyGa~~reg  118 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQ-KRLLMDLDIIMRTVDCPFTVHFYGALFREG  118 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHH-HHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence            556666777889999999999988887  499999999986532 2333 344445  5666778999999999999999


Q ss_pred             ceEEEEEecCCCChHHHH----hhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhh
Q 039021          203 EMILITEYLPKGNLKGIL----SKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l----~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      .++|.||.|.- ||..+.    +..+.+++..+-+|+..+.+                   |||++.+|++||||||++.
T Consensus       119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG  197 (282)
T ss_pred             cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence            99999999975 776554    34578888888888887765                   9999999999999999999


Q ss_pred             hhcccCCC--CcCCCCccccccccc----CCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCC
Q 039021          260 FYEQIHPN--QENSQRNDNSSIASN----VLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISR  331 (464)
Q Consensus       260 ~~~~~~~~--~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~  331 (464)
                      .+.+....  ..|-..|||||.+..    ..|+.||||||||+++.||.++++||....  .+.+..+.....|.++...
T Consensus       198 ~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp~~~  277 (282)
T KOG0984|consen  198 YLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLPADT  277 (282)
T ss_pred             eehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCcccc
Confidence            88765433  348899999998753    478999999999999999999999998765  4444444444444444333


Q ss_pred             Cc
Q 039021          332 CP  333 (464)
Q Consensus       332 ~~  333 (464)
                      +|
T Consensus       278 FS  279 (282)
T KOG0984|consen  278 FS  279 (282)
T ss_pred             cC
Confidence            33

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.3e-26  Score=231.86  Aligned_cols=234  Identities=13%  Similarity=0.029  Sum_probs=161.7

Q ss_pred             cccccccccccccceeeeeEEeEE------------------eCceEEEEEeeccCCchHH-----------HHHhHHHH
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKW------------------RGTWVVKTVIKSHIYHPVK-----------MVLSAKDN  180 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~------------------~~~~vavK~~~~~~~~~~~-----------~~~~~~~e  180 (464)
                      ...+|.+.++||+|+||.||+|.+                  .++.||||.+........+           ..+....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            344799999999999999999964                  2467999998753211000           01112234


Q ss_pred             -HHHHhcCCCce-----eeeeceeee--------CCceEEEEEecCCCChHHHHhhc-----------------------
Q 039021          181 -CKLRELRHPNI-----LQFLGSIVL--------GEEMILITEYLPKGNLKGILSKK-----------------------  223 (464)
Q Consensus       181 -~~l~~l~hpnI-----v~~~~~~~~--------~~~~~lv~E~~~~g~L~~~l~~~-----------------------  223 (464)
                       ..+.+++|.++     ++++++|..        .+..+|||||+++|+|.++++..                       
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence             55666766544     677777753        35689999999999999988642                       


Q ss_pred             -cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----CCcCCCCccccccc
Q 039021          224 -VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----NQENSQRNDNSSIA  280 (464)
Q Consensus       224 -~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----~~~gt~~y~aPE~~  280 (464)
                       ..+++..+..++.|++.                  |||++.++.+||+|||+++.......    ...+|+.|+|||++
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence             12356677888888875                  99999999999999999976543211    12258899999987


Q ss_pred             ccCC--------------------CC--CcccchhHHHHHHHHHhCCC-CCCCCc---cchh------c-c-ccccCCCC
Q 039021          281 SNVL--------------------DD--TKKDICSFGYIFYQMLEGKH-LQTNNS---FDFM------H-L-KSVNFEPK  326 (464)
Q Consensus       281 ~~~~--------------------~~--~~~DvwSlGv~l~el~~g~~-p~~~~~---~~~~------~-~-~~~~~~~~  326 (464)
                      ....                    |+  .+.||||+||++|+|++|.. ||....   .+..      . + ........
T Consensus       383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~  462 (507)
T PLN03224        383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD  462 (507)
T ss_pred             cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence            5322                    12  34799999999999999875 775432   0000      0 0 01111222


Q ss_pred             cc-CCCCcHHHHHHHHHHcccCC---CCCCCHHHHHHHHHH
Q 039021          327 FQ-ISRCPNRLKQLIAQCTNKDP---SKRPTFAAVIITLEE  363 (464)
Q Consensus       327 ~~-~~~~~~~~~~li~~cl~~dp---~~Rpt~~~i~~~l~~  363 (464)
                      +. ....++...+|+.++|..+|   .+|+|++|+++|.+.
T Consensus       463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f  503 (507)
T PLN03224        463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF  503 (507)
T ss_pred             cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence            22 24578999999999999876   689999999999764

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=1.5e-26  Score=238.73  Aligned_cols=228  Identities=15%  Similarity=0.035  Sum_probs=150.2

Q ss_pred             cccccccccccccceeeeeEEeEEe------CceEEEEEeeccCCchHHHHHhHHHHHHHHhcCCCceeeeece------
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR------GTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS------  197 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~l~~l~hpnIv~~~~~------  197 (464)
                      ...+|.+.+.||+|+||.||+|++.      +..||+|.+.....     .+...++ .++...+.++..++..      
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~l~~~~~~~~~~~~~~~~~~~~  203 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-RVRRACPNSCADFVYGFLEPVS  203 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-HHHhhchhhHHHHHHhhhcccc
Confidence            3347999999999999999999983      67999998865321     1111111 2222223333332222      


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhccC--------------------CCHHHHHHHHHHHHh-----------------
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKKVR--------------------LDLPTALRYALDIAR-----------------  240 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~--------------------l~~~~~~~~~~qi~~-----------------  240 (464)
                      ...+..++|||||+.+++|.+++.....                    .....+..++.|++.                 
T Consensus       204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP  283 (566)
T PLN03225        204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP  283 (566)
T ss_pred             cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence            2345679999999999999999865321                    112335567888875                 


Q ss_pred             -hhcccC-CCceeEecchhhhhhccc----CCCCcCCCCcccccccccC----------------------CCCCcccch
Q 039021          241 -NLLQDE-GDHLKIGEYWVQMFYEQI----HPNQENSQRNDNSSIASNV----------------------LDDTKKDIC  292 (464)
Q Consensus       241 -Nill~~-~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dvw  292 (464)
                       |||++. ++.+||+|||+|+.....    .....+++.|||||.+...                      .++.++|||
T Consensus       284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw  363 (566)
T PLN03225        284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY  363 (566)
T ss_pred             HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence             999986 578999999999865422    2344589999999965322                      234567999


Q ss_pred             hHHHHHHHHHhCCCCCCCCccchhcccccc----------CCCCcc--------C-CCCcHHHHHHHHHHcccCCCCCCC
Q 039021          293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVN----------FEPKFQ--------I-SRCPNRLKQLIAQCTNKDPSKRPT  353 (464)
Q Consensus       293 SlGv~l~el~~g~~p~~~~~~~~~~~~~~~----------~~~~~~--------~-~~~~~~~~~li~~cl~~dp~~Rpt  353 (464)
                      ||||++|||+++..|+..............          ......        . ...+....+||.+||++||++|||
T Consensus       364 SlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        364 SAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            999999999998776654321111100000          000000        0 112334568999999999999999


Q ss_pred             HHHHHHHHHH
Q 039021          354 FAAVIITLEE  363 (464)
Q Consensus       354 ~~~i~~~l~~  363 (464)
                      +.++++|.+.
T Consensus       444 a~e~L~Hpff  453 (566)
T PLN03225        444 AKAALAHPYF  453 (566)
T ss_pred             HHHHhCCcCc
Confidence            9999998653

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=7.4e-28  Score=229.66  Aligned_cols=226  Identities=22%  Similarity=0.264  Sum_probs=176.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC------CCceeeeeceeeeC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR------HPNILQFLGSIVLG  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~------hpnIv~~~~~~~~~  201 (464)
                      ..+|.+....|+|-|+.|.+|.+.  |..||||+|...    +-....=..| ++|++|+      --|+++|+-.|...
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk  506 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK  506 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence            346999999999999999999984  889999999964    3344455667 9999994      34899999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc---cCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhhh
Q 039021          202 EEMILITEYLPKGNLKGILSKK---VRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQM  259 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a~  259 (464)
                      +++|||+|-+.- +|.++|++.   -.|....+..|+.|+.-                  |||+++. ..+||||||.|.
T Consensus       507 nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~  585 (752)
T KOG0670|consen  507 NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSAS  585 (752)
T ss_pred             ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccc
Confidence            999999999864 999999874   35778888888888843                  9999876 469999999999


Q ss_pred             hhcccCCCCc-CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc-----------------
Q 039021          260 FYEQIHPNQE-NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS-----------------  320 (464)
Q Consensus       260 ~~~~~~~~~~-gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~-----------------  320 (464)
                      +......+.. -+..|.|||++.+..|+...|+||.||+||||.||+..|++.. .+.+.+..                 
T Consensus       586 ~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~  665 (752)
T KOG0670|consen  586 FASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK  665 (752)
T ss_pred             ccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence            8875543322 5678999999999999999999999999999999999998765 22211110                 


Q ss_pred             ---------------------------ccCCCC------------ccC--CCCcHHHHHHHHHHcccCCCCCCCHHHHHH
Q 039021          321 ---------------------------VNFEPK------------FQI--SRCPNRLKQLIAQCTNKDPSKRPTFAAVII  359 (464)
Q Consensus       321 ---------------------------~~~~~~------------~~~--~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~  359 (464)
                                                 ....|.            ++.  ...-..+.+|+.+||..||++|.|..+.|.
T Consensus       666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                                       000010            000  001136889999999999999999999998


Q ss_pred             HH
Q 039021          360 TL  361 (464)
Q Consensus       360 ~l  361 (464)
                      |.
T Consensus       746 Hp  747 (752)
T KOG0670|consen  746 HP  747 (752)
T ss_pred             CC
Confidence            74

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.94  E-value=2.6e-27  Score=237.82  Aligned_cols=221  Identities=17%  Similarity=0.168  Sum_probs=166.9

Q ss_pred             cccccccccceee-eeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFG-ESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g-~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |...+++|.|+-| .||+|.+.|+.||||.+-.      +......+| ..|+.- +|||||++|+.-.+....||..|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL  584 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence            5556789999998 5899999999999999874      344566778 888877 699999999988899999999999


Q ss_pred             cCCCChHHHHhhc-cC---CCHHHHHHHHHHHHh------------------hhcccC---C--CceeEecchhhhhhcc
Q 039021          211 LPKGNLKGILSKK-VR---LDLPTALRYALDIAR------------------NLLQDE---G--DHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~---l~~~~~~~~~~qi~~------------------Nill~~---~--~~~kl~DFG~a~~~~~  263 (464)
                      |.. +|.+++... ..   ......+....|+++                  ||||+.   +  ..++|+|||+++.+..
T Consensus       585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~  663 (903)
T KOG1027|consen  585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG  663 (903)
T ss_pred             hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence            986 999999763 11   111223444445443                  999976   3  4599999999998864


Q ss_pred             cC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchhccccccCCCCccCCCCcHHH
Q 039021          264 IH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       264 ~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ..      .+..||-+|+|||++.+...+.++||||+||++|+.++ |..||...-.........+.......+.-..++
T Consensus       664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA  743 (903)
T KOG1027|consen  664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEA  743 (903)
T ss_pred             CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHH
Confidence            32      23349999999999999888899999999999999999 599998755222222111111100001111289


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+||.+|+..+|..||++.+|+.|.
T Consensus       744 ~dLI~~ml~~dP~~RPsa~~VL~HP  768 (903)
T KOG1027|consen  744 KDLISRMLNPDPQLRPSATDVLNHP  768 (903)
T ss_pred             HHHHHHhcCCCcccCCCHHHHhCCC
Confidence            9999999999999999999999983

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.93  E-value=2.3e-26  Score=222.06  Aligned_cols=188  Identities=16%  Similarity=0.148  Sum_probs=158.1

Q ss_pred             CCcccccccc-ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHH-----hHHHH-HHHHhcC---CCc
Q 039021          123 NEVNFDISEL-NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVL-----SAKDN-CKLRELR---HPN  190 (464)
Q Consensus       123 ~~~~i~~~~~-~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~-----~~~~e-~~l~~l~---hpn  190 (464)
                      ..|+...... +|...+.+|+|+||.|++|.++  ...|++|.+.+...-..-..+     .+.-| +||..|+   |+|
T Consensus       551 ~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N  630 (772)
T KOG1152|consen  551 IGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN  630 (772)
T ss_pred             ccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc
Confidence            3444444443 5999999999999999999985  678999999876543222222     24457 8999997   999


Q ss_pred             eeeeeceeeeCCceEEEEEec-CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          191 ILQFLGSIVLGEEMILITEYL-PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       191 Iv~~~~~~~~~~~~~lv~E~~-~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      |+|++++|++++++||+||-- +|-+|+++|..+..+++.++..|++|++.                  |+.++.+|-+|
T Consensus       631 IlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~k  710 (772)
T KOG1152|consen  631 ILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVK  710 (772)
T ss_pred             hhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEE
Confidence            999999999999999999964 45689999999999999999999999986                  99999999999


Q ss_pred             EecchhhhhhcccC-CCCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCC
Q 039021          252 IGEYWVQMFYEQIH-PNQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTN  310 (464)
Q Consensus       252 l~DFG~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~  310 (464)
                      |+|||.|....... ....||..|.|||++.+..| ...-|||++||+||-++..+.||.+
T Consensus       711 lidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  711 LIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             EeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            99999998876543 45569999999999999887 4678999999999999999999854

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=1.1e-24  Score=196.99  Aligned_cols=188  Identities=26%  Similarity=0.394  Sum_probs=165.6

Q ss_pred             cccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecCCCCh
Q 039021          140 VEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL  216 (464)
Q Consensus       140 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L  216 (464)
                      ||+|++|.||++...  ++.+++|++.......  ....+.+| +.++.++|++|+++++++......+++|||+++++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            689999999999996  8999999998643211  35678889 999999999999999999999999999999999999


Q ss_pred             HHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhhhhccc---CCCCcCCCC
Q 039021          217 KGILSKK-VRLDLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQMFYEQI---HPNQENSQR  273 (464)
Q Consensus       217 ~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~~~~~~---~~~~~gt~~  273 (464)
                      .+++... ..+++..+..++.++++                  ||+++. ++.++|+|||.+......   .....+...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  158 (215)
T cd00180          79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA  158 (215)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence            9999765 57899999999999976                  999998 899999999999877654   233458899


Q ss_pred             cccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          274 NDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       274 y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      |++||.+... .++.++|+|++|+++|+|                                +.+.+++.+||..+|++||
T Consensus       159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------~~~~~~l~~~l~~~p~~R~  206 (215)
T cd00180         159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------PELKDLIRKMLQKDPEKRP  206 (215)
T ss_pred             ccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------HHHHHHHHHHhhCCcccCc
Confidence            9999999877 888999999999999999                                7789999999999999999


Q ss_pred             CHHHHHHHH
Q 039021          353 TFAAVIITL  361 (464)
Q Consensus       353 t~~~i~~~l  361 (464)
                      ++.++++++
T Consensus       207 ~~~~l~~~~  215 (215)
T cd00180         207 SAKEILEHL  215 (215)
T ss_pred             CHHHHhhCC
Confidence            999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.92  E-value=4.1e-24  Score=195.97  Aligned_cols=175  Identities=23%  Similarity=0.276  Sum_probs=152.8

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |.+.+.||+|++|.||++...  +..+++|.+......  .....+.+| +.+++++|+|++++++.+......++++||
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence            456789999999999999985  689999999865322  246678889 999999999999999999998999999999


Q ss_pred             cCCCChHHHHhhccC-CCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----CC
Q 039021          211 LPKGNLKGILSKKVR-LDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----PN  267 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~-l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~~  267 (464)
                      +++++|.+++..... +++..+..++.|++.                  ||+++.++.++|+|||.+.......    ..
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (225)
T smart00221       79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT  158 (225)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence            999999999987655 899999999999876                  9999999999999999998876543    34


Q ss_pred             CcCCCCccccccc-ccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 039021          268 QENSQRNDNSSIA-SNVLDDTKKDICSFGYIFYQMLEGKHLQTN  310 (464)
Q Consensus       268 ~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~el~~g~~p~~~  310 (464)
                      ..++..|++||++ ....++.++|||+||+++|+|++|+.||..
T Consensus       159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            4588899999998 667788899999999999999999999977

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.92  E-value=4.7e-25  Score=190.57  Aligned_cols=223  Identities=16%  Similarity=0.154  Sum_probs=176.2

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeC--CceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLG--EEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~--~~~~  205 (464)
                      .+|++.+++|+|.|++|+.|..  +++.+++|+++.      -....+.+| .+|+.|. |||||+++++..++  ....
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa  111 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS  111 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence            3699999999999999999995  588899999985      234578889 9999996 99999999999875  4578


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccCC
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~~  266 (464)
                      ||+||+.+-+...+..   .|+..+++.++.++++                  |+++|... .++|+|+|+|.+......
T Consensus       112 LiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e  188 (338)
T KOG0668|consen  112 LIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE  188 (338)
T ss_pred             hHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence            9999999977665543   6888899999999986                  99999764 599999999999876554


Q ss_pred             CCc--CCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc---cchhccc----------------c----
Q 039021          267 NQE--NSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLK----------------S----  320 (464)
Q Consensus       267 ~~~--gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~----------------~----  320 (464)
                      ...  .+..|--||.+-. ..|+..-|+|||||++..|+..+-||....   .+.....                +    
T Consensus       189 YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp  268 (338)
T KOG0668|consen  189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDP  268 (338)
T ss_pred             eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCCh
Confidence            433  7888999998865 778999999999999999999998985432   2211110                0    


Q ss_pred             -------ccCCCCcc-------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 -------VNFEPKFQ-------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 -------~~~~~~~~-------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                             ...+..+.       ..-+++++.+|+.++|..|-.+|+|++|.+.|...
T Consensus       269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF  325 (338)
T KOG0668|consen  269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYF  325 (338)
T ss_pred             hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchH
Confidence                   00000110       12257899999999999999999999999998543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=1.1e-24  Score=192.44  Aligned_cols=149  Identities=15%  Similarity=0.145  Sum_probs=117.9

Q ss_pred             CChHHHHhh-ccCCCHHHHHHHHHHHHh------------hhcccCCCceeEecchhhhhhcccCCCCcCCCCccccccc
Q 039021          214 GNLKGILSK-KVRLDLPTALRYALDIAR------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIA  280 (464)
Q Consensus       214 g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~  280 (464)
                      |+|.++++. ...+++.+++.++.|+++            |||++.++.+|+  ||+++.....  ...||+.|||||++
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~--~~~g~~~y~aPE~~   76 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPE--QSRVDPYFMAPEVI   76 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeeccc--cCCCcccccChHHh
Confidence            699999986 456999999999999987            999999999999  9998876543  23689999999999


Q ss_pred             ccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCc-----cCCCCcH--HHHHHHHHHcccCCCCC
Q 039021          281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKF-----QISRCPN--RLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       281 ~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~--~~~~li~~cl~~dp~~R  351 (464)
                      .+..++.++|||||||++|||++|+.||....  ...............     ....+++  ++.+++.+||..+|++|
T Consensus        77 ~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~R  156 (176)
T smart00750       77 QGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRR  156 (176)
T ss_pred             cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccc
Confidence            99999999999999999999999999997654  111111111111110     1122333  69999999999999999


Q ss_pred             CCHHHHHHHHHHHHH
Q 039021          352 PTFAAVIITLEEVSA  366 (464)
Q Consensus       352 pt~~~i~~~l~~~~~  366 (464)
                      |++.++++|++....
T Consensus       157 p~~~~ll~~~~~~~~  171 (176)
T smart00750      157 EAANHYLAHCRALFA  171 (176)
T ss_pred             cCHHHHHHHHHHHHH
Confidence            999999999987643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4.5e-24  Score=202.81  Aligned_cols=227  Identities=17%  Similarity=0.166  Sum_probs=174.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-----C---Cceeeeeceeee
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-----H---PNILQFLGSIVL  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-----h---pnIv~~~~~~~~  200 (464)
                      .+|.+.++||=|.|++||+|.+.  .+.||+|+.+..    ....+....| .+|++++     |   .+||+|++.|..
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh  153 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH  153 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence            57999999999999999999995  789999999953    4556667788 8998873     3   379999999985


Q ss_pred             ----CCceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh----------------------------------
Q 039021          201 ----GEEMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR----------------------------------  240 (464)
Q Consensus       201 ----~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~----------------------------------  240 (464)
                          +.+++||+|++ |-+|..+|..  .+.++...+..|++|++.                                  
T Consensus       154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~  232 (590)
T KOG1290|consen  154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDA  232 (590)
T ss_pred             cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhh
Confidence                45799999999 5589999865  367999999999999964                                  


Q ss_pred             --------------------------------------------------------------------------------
Q 039021          241 --------------------------------------------------------------------------------  240 (464)
Q Consensus       241 --------------------------------------------------------------------------------  240 (464)
                                                                                                      
T Consensus       233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~  312 (590)
T KOG1290|consen  233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN  312 (590)
T ss_pred             hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence                                                                                            


Q ss_pred             --------------------h--------------------------------------------hcc-------cCCCc
Q 039021          241 --------------------N--------------------------------------------LLQ-------DEGDH  249 (464)
Q Consensus       241 --------------------N--------------------------------------------ill-------~~~~~  249 (464)
                                          |                                            -++       ..+-.
T Consensus       313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~  392 (590)
T KOG1290|consen  313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR  392 (590)
T ss_pred             ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence                                0                                            111       01124


Q ss_pred             eeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-----cc---hhccc--
Q 039021          250 LKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-----FD---FMHLK--  319 (464)
Q Consensus       250 ~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-----~~---~~~~~--  319 (464)
                      +||+|||-|-......+....|..|+|||++.+..|+..+||||++|++|||+||.+.|...+     .+   +...+  
T Consensus       393 vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~EL  472 (590)
T KOG1290|consen  393 VKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMEL  472 (590)
T ss_pred             EEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHH
Confidence            899999999988777667779999999999999999999999999999999999999886432     11   11000  


Q ss_pred             --------cccC-----------------C-CCccC-------CCC----cHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          320 --------SVNF-----------------E-PKFQI-------SRC----PNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       320 --------~~~~-----------------~-~~~~~-------~~~----~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                              ..+.                 + ..|+.       -.+    ..++.+|+.-||+.+|++|||+.+.++|.|
T Consensus       473 LG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPw  552 (590)
T KOG1290|consen  473 LGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPW  552 (590)
T ss_pred             HhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCcc
Confidence                    0000                 0 00110       112    246888999999999999999999999977


Q ss_pred             H
Q 039021          363 E  363 (464)
Q Consensus       363 ~  363 (464)
                      .
T Consensus       553 L  553 (590)
T KOG1290|consen  553 L  553 (590)
T ss_pred             c
Confidence            4

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=5.6e-26  Score=201.01  Aligned_cols=229  Identities=19%  Similarity=0.225  Sum_probs=174.8

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-----ce
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-----EM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-----~~  204 (464)
                      +.+-.+.||-|+||.||-+.+  +|+.||+|.+..-... -.....+-+| .+|.-++|.|++..+++..-..     .+
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~-L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN-LASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHH-HHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            344557999999999999998  4999999988742211 1223445566 8999999999999998776432     47


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      |+|+|++.. ||+.+|-..+.++...+.-+++||++                  |+|++++-.+||||||+|+.-+....
T Consensus       133 YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~  211 (449)
T KOG0664|consen  133 YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR  211 (449)
T ss_pred             HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence            899999975 99999988889999999999999987                  88899999999999999997663322


Q ss_pred             ----CCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccc---------------------
Q 039021          267 ----NQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLK---------------------  319 (464)
Q Consensus       267 ----~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~---------------------  319 (464)
                          ...-|.+|+|||++.+ ..|+.+.||||.||++.||+-.+..|...+ .+....+                     
T Consensus       212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~  291 (449)
T KOG0664|consen  212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN  291 (449)
T ss_pred             hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence                2237889999999988 779999999999999999999988887655 1111111                     


Q ss_pred             ---cccC-CCCccC-------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          320 ---SVNF-EPKFQI-------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       320 ---~~~~-~~~~~~-------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                         .... .|.++.       ..-..+...++.+++..||++|.+..+.+.|+..
T Consensus       292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence               0011 111111       1123467788899999999999999999888643

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.89  E-value=7e-24  Score=191.98  Aligned_cols=227  Identities=16%  Similarity=0.126  Sum_probs=174.7

Q ss_pred             cccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----  201 (464)
                      ...+|.-.+.+|.|.- .|.-+.+  .+++||+|.+...... ....++..+| ..+..+.|+||++++.+|+-.     
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~   92 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE   92 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence            3456777788999888 6666666  4899999998765322 3334566778 999999999999999999743     


Q ss_pred             -CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 -EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                       ...|+||||+.. +|.+.+..  .++...+..++.|+++                  ||++..+..+||.|||+|+...
T Consensus        93 ~~e~y~v~e~m~~-nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   93 FQEVYLVMELMDA-NLCQVILM--ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHhHHHHHHhhhh-HHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence             357999999975 99999884  6888999999999986                  9999999999999999998765


Q ss_pred             cc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhcccc------------------
Q 039021          263 QI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKS------------------  320 (464)
Q Consensus       263 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~------------------  320 (464)
                      ..  ......|..|.|||++.+..|...+||||+||++.||++|+..|.+.+  .+......                  
T Consensus       170 ~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r  249 (369)
T KOG0665|consen  170 TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR  249 (369)
T ss_pred             cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence            43  223348899999999999889999999999999999999999888654  11110000                  


Q ss_pred             -----------ccCCCCccC---------C-CCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          321 -----------VNFEPKFQI---------S-RCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       321 -----------~~~~~~~~~---------~-~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                                 ......++.         + .-...+.+++.+||..||++|.+++++++|.
T Consensus       250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence                       000001111         0 1134678999999999999999999999984

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.3e-23  Score=183.44  Aligned_cols=226  Identities=15%  Similarity=0.171  Sum_probs=167.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HH-HHhcCCCceeeeec-eeeeCCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CK-LRELRHPNILQFLG-SIVLGEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~-l~~l~hpnIv~~~~-~~~~~~~~~lv  207 (464)
                      .|.+.+.||+|.||.+-++.++  .+.+++|.+....    -..++|.+| .. +---.|.||+.-|+ .|+..+.++++
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            5999999999999999999997  6789999998653    345567777 33 33336899999887 45667888899


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc--CCCceeEecchhhhhhcccCCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD--EGDHLKIGEYWVQMFYEQIHPN  267 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~--~~~~~kl~DFG~a~~~~~~~~~  267 (464)
                      |||++.|||.+-+... .+-+.....++.|++.                  |||+-  +...+||||||+.+..+.....
T Consensus       101 qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~  179 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY  179 (378)
T ss_pred             eccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence            9999999999888664 5677777788888875                  88873  2347999999999887765555


Q ss_pred             CcCCCCcccccccccC-----CCCCcccchhHHHHHHHHHhCCCCCCCCc---cchhccc--cccCCCCccC--CCCcHH
Q 039021          268 QENSQRNDNSSIASNV-----LDDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLK--SVNFEPKFQI--SRCPNR  335 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~--~~~~~~~~~~--~~~~~~  335 (464)
                      ..-+-.|.+||.....     ..++.+|||.|||++|.+++|+.||....   .....+.  .....+..|.  ..+++.
T Consensus       180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~  259 (378)
T KOG1345|consen  180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEK  259 (378)
T ss_pred             hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHH
Confidence            5567789999976543     23578999999999999999999998554   1111111  1111222221  457899


Q ss_pred             HHHHHHHHcccCCCCCC---CHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRP---TFAAVIITLEE  363 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rp---t~~~i~~~l~~  363 (464)
                      +..+.++-|..+|++|-   +++.....+|.
T Consensus       260 a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  260 ALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             HHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence            99999999999999994   44554444443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.85  E-value=3.3e-22  Score=216.51  Aligned_cols=177  Identities=12%  Similarity=0.103  Sum_probs=129.1

Q ss_pred             HHhcCC-Cceeeeecee-------eeCCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh-------------
Q 039021          183 LRELRH-PNILQFLGSI-------VLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR-------------  240 (464)
Q Consensus       183 l~~l~h-pnIv~~~~~~-------~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~-------------  240 (464)
                      .+.++| +||++++++|       .....++.+|||+ +++|+++|.. ...+++.+++.++.||++             
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHr  104 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVH  104 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            345566 6888888888       2334678889988 4599999975 456999999999999987             


Q ss_pred             -----hhcccC-------------------CCceeEecchhhhhhccc-------------------CCCCcCCCCcccc
Q 039021          241 -----NLLQDE-------------------GDHLKIGEYWVQMFYEQI-------------------HPNQENSQRNDNS  277 (464)
Q Consensus       241 -----Nill~~-------------------~~~~kl~DFG~a~~~~~~-------------------~~~~~gt~~y~aP  277 (464)
                           |||++.                   ++.+||+|||+++.....                   .....||+.||||
T Consensus       105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP  184 (793)
T PLN00181        105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP  184 (793)
T ss_pred             cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence                 999953                   456778888887643210                   0012378899999


Q ss_pred             cccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHH
Q 039021          278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV  357 (464)
Q Consensus       278 E~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i  357 (464)
                      |++.+..|+.++|||||||+||||++|..|+............. ..+... ....+....++.+||+++|.+||++.++
T Consensus       185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~ei  262 (793)
T PLN00181        185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR-VLPPQI-LLNWPKEASFCLWLLHPEPSCRPSMSEL  262 (793)
T ss_pred             hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHh-hcChhh-hhcCHHHHHHHHHhCCCChhhCcChHHH
Confidence            99999999999999999999999999998876543111111111 111111 1124566789999999999999999999


Q ss_pred             HHHHH
Q 039021          358 IITLE  362 (464)
Q Consensus       358 ~~~l~  362 (464)
                      ++|.+
T Consensus       263 l~h~~  267 (793)
T PLN00181        263 LQSEF  267 (793)
T ss_pred             hhchh
Confidence            88743

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=6.8e-21  Score=157.94  Aligned_cols=104  Identities=28%  Similarity=0.332  Sum_probs=67.9

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~-ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      ++.|+.|+||||.||..|+.++|+.|+.+ |+|+|+.+..|.||||+|+..|+.+|+++|++.|+.++.+|..|.||||-
T Consensus        66 ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHR  145 (226)
T KOG4412|consen   66 DDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHR  145 (226)
T ss_pred             CCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHH
Confidence            44466666666666666666666666666 66666666666666666666666666666666666666666666666666


Q ss_pred             HHhcCchHHHHHHhcccCccccccC
Q 039021           88 ARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+..|...++++|+..|+..+..+.
T Consensus       146 AAavGklkvie~Li~~~a~~n~qDk  170 (226)
T KOG4412|consen  146 AAAVGKLKVIEYLISQGAPLNTQDK  170 (226)
T ss_pred             HHhccchhhHHHHHhcCCCCCcccc
Confidence            6666666666666666665555444

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=1.5e-20  Score=155.90  Aligned_cols=109  Identities=26%  Similarity=0.291  Sum_probs=104.4

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..+..|.|+|||||..|.++++++|+++|+.++.+|..|.||||.|+..|.++++++|+..|+.+|.+|+.|+|
T Consensus        95 ~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~T  174 (226)
T KOG4412|consen   95 SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFT  174 (226)
T ss_pred             CCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCcc
Confidence            37888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||.|...|+.++..+|+++|++....+.
T Consensus       175 pL~~al~e~~~d~a~lLV~~gAd~~~edk  203 (226)
T KOG4412|consen  175 PLHHALAEGHPDVAVLLVRAGADTDREDK  203 (226)
T ss_pred             HHHHHHhccCchHHHHHHHhccceeeccc
Confidence            99999999999999999999998776665

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.82  E-value=1.3e-20  Score=176.94  Aligned_cols=223  Identities=15%  Similarity=0.184  Sum_probs=170.0

Q ss_pred             ccccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCc
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEE  203 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~  203 (464)
                      ...|.+.++||+|.|++||++.+     +++.||+|.+....     .-..+.+| +.|..+ .+.||+++.+++...+.
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            34688999999999999999986     36789999998632     23457888 999888 68999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhhhhhcc-
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQMFYEQ-  263 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a~~~~~-  263 (464)
                      ..+||||+++-+..+++.   .++..++..|++.+.+                  |+|.+.. +.-.|.|||+|..... 
T Consensus       110 v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~  186 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY  186 (418)
T ss_pred             eEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence            999999999988888876   4778899999998876                  8887654 5678999999972110 


Q ss_pred             -------c---------C------------------------------CCCcCCCCccccccccc-CCCCCcccchhHHH
Q 039021          264 -------I---------H------------------------------PNQENSQRNDNSSIASN-VLDDTKKDICSFGY  296 (464)
Q Consensus       264 -------~---------~------------------------------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv  296 (464)
                             .         .                              ....||++|.|||++.. ...+.++||||.||
T Consensus       187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV  266 (418)
T KOG1167|consen  187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV  266 (418)
T ss_pred             hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence                   0         0                              00119999999999976 45688999999999


Q ss_pred             HHHHHHhCCCCCCCCccc------hhcc--------------c---cc-cC-------------------CC-C---cc-
Q 039021          297 IFYQMLEGKHLQTNNSFD------FMHL--------------K---SV-NF-------------------EP-K---FQ-  328 (464)
Q Consensus       297 ~l~el~~g~~p~~~~~~~------~~~~--------------~---~~-~~-------------------~~-~---~~-  328 (464)
                      ++.-++++.+||.....+      +...              .   .. ..                   .. .   .. 
T Consensus       267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~  346 (418)
T KOG1167|consen  267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER  346 (418)
T ss_pred             eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence            999999999998643211      0000              0   00 00                   00 0   00 


Q ss_pred             ---CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          329 ---ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       329 ---~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                         ....|..+.+|+.+||..||.+|.|+++.|+|.
T Consensus       347 ~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp  382 (418)
T KOG1167|consen  347 EIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP  382 (418)
T ss_pred             ccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence               022456899999999999999999999999984

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.5e-21  Score=190.70  Aligned_cols=207  Identities=19%  Similarity=0.209  Sum_probs=166.9

Q ss_pred             ccccceeeeeEEeEE-----eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEEec
Q 039021          139 MVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      .+|+|.||.|++++-     .|.-+|.|++++......... ....| .++..++ ||.+|++...|+.+...+++++|.
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            379999999998763     378899999987544333222 55667 8888886 999999999999999999999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCCCC
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQR  273 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~  273 (464)
                      .||+|+..+.+...+++.....+...++-                  ||+++.+|++|+.|||+++..-..... +||..
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-cgt~e  158 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-CGTYE  158 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-ccchh
Confidence            99999999988777776666555554432                  999999999999999999987655544 99999


Q ss_pred             cccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCC
Q 039021          274 NDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT  353 (464)
Q Consensus       274 y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt  353 (464)
                      |||||++.  .....+|.||||++++||++|..||..   +.+..+.. ..+..+ ..++..+.+++..++..+|.+|.-
T Consensus       159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~Il~-~~~~~p-~~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKRILK-AELEMP-RELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HHHHHHhh-hccCCc-hhhhHHHHHHHHHHHhhCHHHHhc
Confidence            99999998  677899999999999999999999988   23333222 123333 557889999999999999999974


Q ss_pred             H
Q 039021          354 F  354 (464)
Q Consensus       354 ~  354 (464)
                      .
T Consensus       232 ~  232 (612)
T KOG0603|consen  232 A  232 (612)
T ss_pred             c
Confidence            3

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=1.7e-19  Score=164.43  Aligned_cols=236  Identities=14%  Similarity=0.103  Sum_probs=187.3

Q ss_pred             cccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCc
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEE  203 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~  203 (464)
                      -+....|+++++||+|.||+++.|+.  ++++||||.-...     ...-+++.| +..+.|. .++|..+|-+..++-+
T Consensus        24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~   98 (449)
T KOG1165|consen   24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY   98 (449)
T ss_pred             eEecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccch
Confidence            34456799999999999999999986  7999999997653     223467888 8888885 6999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCC-----ceeEecchhhh
Q 039021          204 MILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGD-----HLKIGEYWVQM  259 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~-----~~kl~DFG~a~  259 (464)
                      -.||||++ |.+|.|+..- ...++..++..++.|++.                  |.||...+     .+.|+|||+|+
T Consensus        99 NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen   99 NILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            99999988 6799988863 468999999999999976                  99997543     48999999999


Q ss_pred             hhcccCC----------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---cchhccccccCCCC
Q 039021          260 FYEQIHP----------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLKSVNFEPK  326 (464)
Q Consensus       260 ~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~~~~~~~~  326 (464)
                      .+.+..+          ...||.+||+-....+...+.+-|.=|||-++++.+-|..||.+..   ......++...+..
T Consensus       178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~  257 (449)
T KOG1165|consen  178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS  257 (449)
T ss_pred             hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc
Confidence            8875443          2339999999999999999999999999999999999999999865   11222222222222


Q ss_pred             cc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          327 FQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       327 ~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      .+    -..+|.++..-|+-.-..+-.+-|..+=+...+..+...+.
T Consensus       258 T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g  304 (449)
T KOG1165|consen  258 TPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLG  304 (449)
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcC
Confidence            22    25689999999998888888899988777766666655443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.80  E-value=3.5e-18  Score=165.22  Aligned_cols=226  Identities=19%  Similarity=0.225  Sum_probs=180.1

Q ss_pred             cccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCC-ceeeeeceeeeCCceEEEEEec
Q 039021          134 TLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHP-NILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hp-nIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      |.+.+.||.|+||.||++.+. ..+++|.+.............+.+| .+++.+.|+ +|+++++.+......++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            667789999999999999988 8889999987644433356778888 999999988 7999999997777789999999


Q ss_pred             CCCChHHHHhhcc---CCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccC----
Q 039021          212 PKGNLKGILSKKV---RLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       212 ~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~----  265 (464)
                      .++++.+++....   .++......++.|++.                  ||+++..+ .+|++|||+++......    
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~  160 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSS  160 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcccc
Confidence            9999998887664   7999999999999985                  99999988 69999999998655322    


Q ss_pred             -----CCCcCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-----chhccccccCCC--CccC-
Q 039021          266 -----PNQENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-----DFMHLKSVNFEP--KFQI-  329 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-----~~~~~~~~~~~~--~~~~-  329 (464)
                           ....||..|++||.+.+   ..++...|+||+|++++++++|..||.....     ...........+  .... 
T Consensus       161 ~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (384)
T COG0515         161 IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLS  240 (384)
T ss_pred             ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccC
Confidence                 34459999999999987   5788899999999999999999999776542     222222211111  1111 


Q ss_pred             CCC----cHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          330 SRC----PNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       330 ~~~----~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ...    ...+.+++..++..+|..|.+..+...+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         241 PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            111    2578999999999999999998887766

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=5.1e-20  Score=189.89  Aligned_cols=228  Identities=19%  Similarity=0.188  Sum_probs=173.1

Q ss_pred             ccccccccceeeeeEEeEEe--CceEEEEEeec---cCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          135 LHSSMVEQGVFGESQTAKWR--GTWVVKTVIKS---HIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~---~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .....+|.|++|.|+.+...  ...++.|....   ......+....+..| .+-..+.|||++..+..+.+....+-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            45678999999988877763  33334333321   111222222336667 7888899999999988888776666669


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----  265 (464)
                      |||++ ||+.++...+.++..++..++.|+++                  |+++..+|.+||+|||.+.......     
T Consensus       401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~  479 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH  479 (601)
T ss_pred             hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence            99999 99999988788999999999999985                  9999999999999999998765322     


Q ss_pred             --CCCcCCCCcccccccccCCCCC-cccchhHHHHHHHHHhCCCCCCCCccchh---cccc-----ccCCCCccCCCCcH
Q 039021          266 --PNQENSQRNDNSSIASNVLDDT-KKDICSFGYIFYQMLEGKHLQTNNSFDFM---HLKS-----VNFEPKFQISRCPN  334 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlGv~l~el~~g~~p~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~  334 (464)
                        ...+|+-.|+|||++.+..|+. ..||||.||++..|++|+.||.......-   ....     ....+......+|.
T Consensus       480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~  559 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPR  559 (601)
T ss_pred             hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchh
Confidence              3445999999999999999985 58999999999999999999987652211   1110     00011111255788


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +.+.+|.++|+.||.+|.|+.+|++.-|.
T Consensus       560 ~~~~~~~~~l~~~P~~R~ti~~i~~d~W~  588 (601)
T KOG0590|consen  560 ETRIIIYRMLQLDPTKRITIEQILNDEWI  588 (601)
T ss_pred             hHHHHHHHHccCChhheecHHHHhhChHh
Confidence            99999999999999999999999987553

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.75  E-value=2.9e-18  Score=169.15  Aligned_cols=183  Identities=29%  Similarity=0.426  Sum_probs=144.2

Q ss_pred             HHhcCCCceeeeeceeeeCCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh-------------------hh
Q 039021          183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR-------------------NL  242 (464)
Q Consensus       183 l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~-------------------Ni  242 (464)
                      |+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ...+++.-...++++|++                   |+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            4678999999999999999999999999999999999976 467788777788888876                   99


Q ss_pred             cccCCCceeEecchhhhhhccc-----CCCCcCCCCcccccccccCC-------CCCcccchhHHHHHHHHHhCCCCCCC
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQI-----HPNQENSQRNDNSSIASNVL-------DDTKKDICSFGYIFYQMLEGKHLQTN  310 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlGv~l~el~~g~~p~~~  310 (464)
                      ++|....+||.|||+.......     .....-...|.|||.+.+..       -+.+.||||||++++|+++.+.||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            9999999999999998877531     11222556899999987642       35679999999999999999999987


Q ss_pred             Cc--c---chhccccccC----CCCccC-CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          311 NS--F---DFMHLKSVNF----EPKFQI-SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       311 ~~--~---~~~~~~~~~~----~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ..  .   +.+..+..+.    +|.... ..+++++..++.+||..+|++||++++|...++.+.
T Consensus       161 ~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~  225 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN  225 (484)
T ss_pred             ccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence            54  1   2333322212    222221 245678999999999999999999999988776653

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.74  E-value=2.3e-18  Score=141.90  Aligned_cols=100  Identities=21%  Similarity=0.150  Sum_probs=89.3

Q ss_pred             CCCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCC
Q 039021            2 EGDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ   81 (464)
Q Consensus         2 ~~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g   81 (464)
                      ..+++..|..|.+|.||||.|+++|++++++.|+..||+++++...||||||-||.....+++.+||++|+|+|+.....
T Consensus        84 ~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~  163 (228)
T KOG0512|consen   84 SEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGL  163 (228)
T ss_pred             HhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccccccc
Confidence            35677789999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             CCHHHHHHhcCch-HHHHHHh
Q 039021           82 RTPLTDARLYGHR-DICRILE  101 (464)
Q Consensus        82 ~tpl~~A~~~g~~-~iv~~L~  101 (464)
                      .||||+|+..... ..+++|+
T Consensus       164 ltpLhlaa~~rn~r~t~~~Ll  184 (228)
T KOG0512|consen  164 LTPLHLAAGNRNSRDTLELLL  184 (228)
T ss_pred             chhhHHhhcccchHHHHHHHh
Confidence            9999999976544 4566655

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.73  E-value=1.1e-17  Score=145.73  Aligned_cols=109  Identities=21%  Similarity=0.141  Sum_probs=94.4

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHH---HHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhc-cCCCcccc
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVG---LNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQ-YKANLNLK   77 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~---~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~   77 (464)
                      .+++..+..|..|+||||+|+..|+.+.   ++.|+..|+++|.+| ..|+||||+|+..|+.+++++|+. .|++++.+
T Consensus        45 ~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~  124 (166)
T PHA02743         45 GDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAI  124 (166)
T ss_pred             hcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCc
Confidence            3455567778899999999999887554   788999999999998 589999999999999999999995 79999999


Q ss_pred             cCCCCCHHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           78 DRWQRTPLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        78 d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      |..|.||||+|+..++.+++++|+.+|++....+
T Consensus       125 d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  158 (166)
T PHA02743        125 NYQHETAYHIAYKMRDRRMMEILRANGAVCDDPL  158 (166)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence            9999999999999999999999999998664443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=1.8e-17  Score=160.66  Aligned_cols=152  Identities=11%  Similarity=0.062  Sum_probs=108.8

Q ss_pred             cccccccccccccceeeeeEEeEEe---CceEEEEEeeccCC--chHHHHHhHHHH-HHHHhcCCCceee-eeceeeeCC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIY--HPVKMVLSAKDN-CKLRELRHPNILQ-FLGSIVLGE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~--~~~~~~~~~~~e-~~l~~l~hpnIv~-~~~~~~~~~  202 (464)
                      ...+|.+.+.||+|+||+||+|+++   ++.||+|.+.....  ........+.+| ++|++++|+||+. +++.    +
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~   91 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G   91 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence            3446999999999999999999873   67789998763211  123345678999 9999999999984 5542    4


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ..||||||++|++|... ...   ..   ..++.|+++                   |||++.++.+||+|||+|+....
T Consensus        92 ~~~LVmE~~~G~~L~~~-~~~---~~---~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188         92 KDGLVRGWTEGVPLHLA-RPH---GD---PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             CcEEEEEccCCCCHHHh-Ccc---ch---HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence            58999999999999732 211   11   234445443                   99999999999999999986543


Q ss_pred             cC-----------CCCcCCCCcccccccccCCC------CCcccch
Q 039021          264 IH-----------PNQENSQRNDNSSIASNVLD------DTKKDIC  292 (464)
Q Consensus       264 ~~-----------~~~~gt~~y~aPE~~~~~~~------~~~~Dvw  292 (464)
                      ..           .+..+++.|+|||.+.....      +..+|-|
T Consensus       165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             CcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            21           23348889999998864322      2346766

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.73  E-value=7.3e-18  Score=152.03  Aligned_cols=159  Identities=12%  Similarity=0.104  Sum_probs=117.8

Q ss_pred             cccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHh------HHHH-HHHHhcCCCceeeeeceeeeC-
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLS------AKDN-CKLRELRHPNILQFLGSIVLG-  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e-~~l~~l~hpnIv~~~~~~~~~-  201 (464)
                      .+.+|++.+.||.|+||.||+...++..+|+|++.......+.....      +.+| ..+.++.||+|..+.+++... 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            44579999999999999999987777789999998765444444444      5677 899999999999999987643 


Q ss_pred             -------CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------hhcccCCCceeEecchhhhh
Q 039021          202 -------EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       202 -------~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------Nill~~~~~~kl~DFG~a~~  260 (464)
                             +..+|||||++|.+|.++.    .+++.....+...+..              |++++.+| ++|+|||..+.
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~  183 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMP----EISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRC  183 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhh----hccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCccc
Confidence                   3589999999999998874    2344333333332222              99999988 99999998765


Q ss_pred             hcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHH
Q 039021          261 YEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQML  302 (464)
Q Consensus       261 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~  302 (464)
                      ......         ...++....|+.++|+||||+++..+.
T Consensus       184 ~~e~~a---------~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        184 TAQRKA---------KDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ccchhh---------HHHHHHHhHhcccccccceeEeehHHH
Confidence            432111         111456667888999999999887653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.72  E-value=1.5e-16  Score=154.33  Aligned_cols=231  Identities=13%  Similarity=0.124  Sum_probs=175.1

Q ss_pred             ccccccccccceeeeeEEeEEeC---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC----CCceeeeecee-eeCCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRG---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR----HPNILQFLGSI-VLGEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~----hpnIv~~~~~~-~~~~~  203 (464)
                      +|.+.+.||+|+||.||++.+..   ..+|+|+........   ...+..| .++..+.    .+++.++++.+ ..+..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence            78899999999999999999853   468998887632111   1156667 7777776    26899999988 47778


Q ss_pred             eEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCC-----CceeEecchhh
Q 039021          204 MILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEG-----DHLKIGEYWVQ  258 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~-----~~~kl~DFG~a  258 (464)
                      .+|||+.+ |.+|.++....  +.++..+++.++.|++.                  |+++...     ..+.|.|||+|
T Consensus        96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99999988 67999988543  68999999999999975                  9998765     45999999999


Q ss_pred             hhhc---cc----------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhccccccC
Q 039021          259 MFYE---QI----------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLKSVNF  323 (464)
Q Consensus       259 ~~~~---~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~~~~~  323 (464)
                      +...   ..          .....||..|.++....+...+.+.|+||++-++.+++.|..||.....  ..........
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~  254 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR  254 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence            8322   11          1123399999999999999999999999999999999999999977652  1111111111


Q ss_pred             CCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          324 EPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       324 ~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      ....  .....+.++..++..+-..+...+|....+...++.....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            1111  1133568888888888889999999999999888776443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.71  E-value=8.4e-17  Score=140.76  Aligned_cols=231  Identities=15%  Similarity=0.146  Sum_probs=177.5

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC-CceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH-PNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h-pnIv~~~~~~~~~~~~~lv~  208 (464)
                      .|.++++||.|+||.+|.|..  .|..||+|+-+....     ..++.-| .+.+.|+| ..|..+..++.+...-.+||
T Consensus        16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            589999999999999999997  599999999876432     2356667 88888875 67888888888889999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcccCC
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~~~~  266 (464)
                      |++ |.+|.++..- ...++..+++-.+-|++.                  |.|..-+   ..+-|+|||+|+.+.+..+
T Consensus        91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence            988 7799988853 468999999999999976                  7776433   4588999999998765432


Q ss_pred             ----------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-------hhccccccCCCCccC
Q 039021          267 ----------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-------FMHLKSVNFEPKFQI  329 (464)
Q Consensus       267 ----------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~  329 (464)
                                ...||..|.+-.-..+...+.+-|+=|+|-+|.++.-|..||.+....       .+..+....++...-
T Consensus       170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC  249 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLC  249 (341)
T ss_pred             cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHh
Confidence                      223999999887777777788999999999999999999999986511       111111222222222


Q ss_pred             CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       330 ~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      ..+|.++.-.+..|-..--++-|...=+.+.+..+...+.
T Consensus       250 ~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln  289 (341)
T KOG1163|consen  250 KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN  289 (341)
T ss_pred             CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence            6689999999999998888888987666666555544443

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.70  E-value=3e-17  Score=161.40  Aligned_cols=112  Identities=26%  Similarity=0.257  Sum_probs=104.2

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      +.+.+..|.+|.|+|||||.++++++++.|+++|||+|..+ ..+.||||+||.+|+..+|.+|+++|||++++|..|.+
T Consensus        68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~  147 (600)
T KOG0509|consen   68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLT  147 (600)
T ss_pred             CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCc
Confidence            67788999999999999999999999999999999999999 66889999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccCCccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQPLTV  116 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~p~~~  116 (464)
                      |+|+|+..|+..++-+++.++++....|.....
T Consensus       148 ~lHla~~~~~~~~vayll~~~~d~d~~D~~grT  180 (600)
T KOG0509|consen  148 PLHLAAQFGHTALVAYLLSKGADIDLRDNNGRT  180 (600)
T ss_pred             HHHHHHHhCchHHHHHHHHhcccCCCcCCCCCC
Confidence            999999999999999999999887777764443

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.69  E-value=1.4e-16  Score=123.73  Aligned_cols=88  Identities=33%  Similarity=0.402  Sum_probs=82.5

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHH
Q 039021           19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICR   98 (464)
Q Consensus        19 l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~   98 (464)
                      ||+|+..|+.++++.|++.|.+++.    |+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            7999999999999999999999987    899999999999999999999999999999999999999999999999999


Q ss_pred             HHhcccCccccc
Q 039021           99 ILEVNGGKDFIH  110 (464)
Q Consensus        99 ~L~~~g~~~~~~  110 (464)
                      +|+++|++.+.+
T Consensus        77 ~Ll~~g~~~~~~   88 (89)
T PF12796_consen   77 LLLEHGADVNIR   88 (89)
T ss_dssp             HHHHTTT-TTSS
T ss_pred             HHHHcCCCCCCc
Confidence            999999977654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.69  E-value=2.7e-17  Score=140.71  Aligned_cols=108  Identities=25%  Similarity=0.243  Sum_probs=102.9

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      .+-.|..|+.|.|||.||+..|++.+|+.||+.|||++...+...|+|.+|+..|..++|++||.++.|+|..|.+|.||
T Consensus       150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp  229 (296)
T KOG0502|consen  150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP  229 (296)
T ss_pred             hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |-+|+..+|..|++.|+..|++.+..+.
T Consensus       230 LlyAvrgnhvkcve~Ll~sGAd~t~e~d  257 (296)
T KOG0502|consen  230 LLYAVRGNHVKCVESLLNSGADVTQEDD  257 (296)
T ss_pred             eeeeecCChHHHHHHHHhcCCCcccccc
Confidence            9999999999999999999998776655

>PHA02791 ankyrin-like protein; Provisional

Probab=99.69  E-value=1.4e-16  Score=149.86  Aligned_cols=107  Identities=12%  Similarity=0.027  Sum_probs=89.4

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-hHhHHHHHcCCHHHHHHhhccCCCccccc-CCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKR-TALHLAASEGHAPIVELLLQYKANLNLKD-RWQ   81 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~-t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g   81 (464)
                      .+++.+..|.+|.||||+|+..|+.++++.|+.+|+++|.++..|+ ||||+|+..|+.+++++|+++|.+.  .| ..|
T Consensus        83 ~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g  160 (284)
T PHA02791         83 SGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAIL  160 (284)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccC
Confidence            3566677888899999999999999999999999999988888886 7888888888888888888876543  23 257


Q ss_pred             CCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           82 RTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        82 ~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .||||+|+..|+.+++++|+++|++.+..+.
T Consensus       161 ~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~  191 (284)
T PHA02791        161 LSCIHITIKNGHVDMMILLLDYMTSTNTNNS  191 (284)
T ss_pred             ccHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            8999999999999999999999998776654

>PHA02791 ankyrin-like protein; Provisional

Probab=99.67  E-value=2.8e-16  Score=147.73  Aligned_cols=101  Identities=17%  Similarity=0.091  Sum_probs=94.3

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      +..|.+|.||||+|+..|+.++++.|++.|+++|.++  |+||||+|+..|+.+++++|+.+|++++.+|..|.||||+|
T Consensus        24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~A  101 (284)
T PHA02791         24 FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYA  101 (284)
T ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            4678899999999999999999999999999998875  78999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHhcccCcccccc
Q 039021           89 RLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      +..|+.+++++|+.+|++.+..+
T Consensus       102 a~~g~~eivk~Ll~~gadin~~~  124 (284)
T PHA02791        102 VDSGNMQTVKLFVKKNWRLMFYG  124 (284)
T ss_pred             HHcCCHHHHHHHHHCCCCcCccC
Confidence            99999999999999998765443

>PHA02741 hypothetical protein; Provisional

Probab=99.66  E-value=3.6e-16  Score=136.79  Aligned_cols=102  Identities=22%  Similarity=0.151  Sum_probs=92.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCC----HHHHHHHHHcCCCCCCcCC-CCChHhHHHHHcCCHHHHHHhhc-cCCCccccc
Q 039021            5 AAASGDFDMQVIGNFLSFASRGD----RVGLNQMLREGTSPNVQDY-DKRTALHLAASEGHAPIVELLLQ-YKANLNLKD   78 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~----~~~~~~ll~~ga~~n~~d~-~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~d   78 (464)
                      ++..+..|..|.||||+|+..|+    .++++.|+..|+++|.+|. .|+||||+|+..++.+++++|+. .|++++.+|
T Consensus        50 ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n  129 (169)
T PHA02741         50 AAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCN  129 (169)
T ss_pred             hhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCC
Confidence            45667889999999999999998    5888999999999999985 89999999999999999999997 599999999


Q ss_pred             CCCCCHHHHHHhcCchHHHHHHhcccCc
Q 039021           79 RWQRTPLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        79 ~~g~tpl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      ..|.||||+|...++.+++++|...++.
T Consensus       130 ~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741        130 ADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999987653

>PHA02741 hypothetical protein; Provisional

Probab=99.66  E-value=2e-16  Score=138.41  Aligned_cols=106  Identities=18%  Similarity=0.143  Sum_probs=94.4

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCChHhHHHHHcCC----HHHHHHhhccCCCccc
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLR------EGTSPNVQDYDKRTALHLAASEGH----APIVELLLQYKANLNL   76 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~------~ga~~n~~d~~g~t~lh~A~~~g~----~~~v~~Ll~~ga~~~~   76 (464)
                      ..+..|.+|.|+||+|+..|+.++++.|+.      .|+++|.+|..|+||||+|+..|+    .+++++|+.+|++++.
T Consensus        13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~   92 (169)
T PHA02741         13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA   92 (169)
T ss_pred             HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC
Confidence            345678899999999999999999999864      368999999999999999999999    5899999999999999


Q ss_pred             ccC-CCCCHHHHHHhcCchHHHHHHhc-ccCccccccC
Q 039021           77 KDR-WQRTPLTDARLYGHRDICRILEV-NGGKDFIHDQ  112 (464)
Q Consensus        77 ~d~-~g~tpl~~A~~~g~~~iv~~L~~-~g~~~~~~~~  112 (464)
                      +|. .|.||||+|+..++.+++++|+. .+++.+..+.
T Consensus        93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~  130 (169)
T PHA02741         93 QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA  130 (169)
T ss_pred             CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence            985 99999999999999999999997 5777655543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.66  E-value=1.8e-16  Score=136.71  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=89.0

Q ss_pred             CCCcccchHHHHHHHcCCHH---HHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhc-cCCCcccccCCCCCH
Q 039021           10 DFDMQVIGNFLSFASRGDRV---GLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQ-YKANLNLKDRWQRTP   84 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~---~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tp   84 (464)
                      ..|.+|.||||+|+..|+.+   +++.|++.|+++|.+| ..|+||||+|+..|+.+++++|+. .|++++.+|..|.||
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tp  129 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTP  129 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCH
Confidence            45778999999999888764   5788999999999998 589999999999999999999997 599999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCcc
Q 039021           85 LTDARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      ||+|+..|+.+++++|+.+|+..
T Consensus       130 L~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736        130 YYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCC
Confidence            99999999999999999998754

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.66  E-value=1.9e-16  Score=155.91  Aligned_cols=109  Identities=28%  Similarity=0.338  Sum_probs=99.3

Q ss_pred             CCccCCCCCC-cccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCC
Q 039021            3 GDAAASGDFD-MQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ   81 (464)
Q Consensus         3 ~~~~~~~~~d-~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g   81 (464)
                      +-+|+.|..+ .-+-|||||||.+|++.+|++|+++|||++.+|.+|-+|||+|+..|+.-+|.+||..|+++|.+|..|
T Consensus        99 ~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~g  178 (600)
T KOG0509|consen   99 SHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNG  178 (600)
T ss_pred             HcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCC
Confidence            4567777777 568999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           82 RTPLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        82 ~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      +||||+|+..|+...++.|+..++.....+
T Consensus       179 rTpLmwAaykg~~~~v~~LL~f~a~~~~~d  208 (600)
T KOG0509|consen  179 RTPLMWAAYKGFALFVRRLLKFGASLLLTD  208 (600)
T ss_pred             CCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence            999999999999887888888887544433

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.66  E-value=1.1e-16  Score=151.29  Aligned_cols=103  Identities=24%  Similarity=0.297  Sum_probs=97.0

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ++.+|+....--|||.-||..|+++++++|+++|+|++..|+.|.|+||+||.+||.+|+++|++.|||+|.++..|+|+
T Consensus       107 ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTA  186 (615)
T KOG0508|consen  107 GASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTA  186 (615)
T ss_pred             cCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchH
Confidence            46667666667799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCcc
Q 039021           85 LTDARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      ||.|+..|+.+++++|+.+|+..
T Consensus       187 LH~caEsG~vdivq~Ll~~ga~i  209 (615)
T KOG0508|consen  187 LHDCAESGSVDIVQLLLKHGAKI  209 (615)
T ss_pred             HHhhhhcccHHHHHHHHhCCcee
Confidence            99999999999999999999854

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.65  E-value=3.5e-16  Score=145.40  Aligned_cols=212  Identities=14%  Similarity=0.134  Sum_probs=134.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC----------Cceeeeeceee
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH----------PNILQFLGSIV  199 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h----------pnIv~~~~~~~  199 (464)
                      .+..++.||.|+|+.||.+++.  ++++|+|+............+.+++| -....+.+          -.++.-++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            4667889999999999999994  79999999876554455566777777 33333222          11222222221


Q ss_pred             ---------eCC--------ceEEEEEecCCCChHHHHhh---ccC----CCHHHHHHHHHHHHh---------------
Q 039021          200 ---------LGE--------EMILITEYLPKGNLKGILSK---KVR----LDLPTALRYALDIAR---------------  240 (464)
Q Consensus       200 ---------~~~--------~~~lv~E~~~~g~L~~~l~~---~~~----l~~~~~~~~~~qi~~---------------  240 (464)
                               ...        +.+++|.-+. +||.+++..   ...    +.....+.+..|+++               
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence                     111        3477888885 499887642   222    223334555566665               


Q ss_pred             ---hhcccCCCceeEecchhhhhhcccCCCCcCCCCccccccccc--------CCCCCcccchhHHHHHHHHHhCCCCCC
Q 039021          241 ---NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN--------VLDDTKKDICSFGYIFYQMLEGKHLQT  309 (464)
Q Consensus       241 ---Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~el~~g~~p~~  309 (464)
                         |++++.+|.++|+||+.....+........+..|.+||....        ..++.+.|.|+||+++|.|.||..||.
T Consensus       172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~  251 (288)
T PF14531_consen  172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG  251 (288)
T ss_dssp             SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred             ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence               999999999999999887776654443446688999997744        346889999999999999999999998


Q ss_pred             CCccchhccc-cccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          310 NNSFDFMHLK-SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       310 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      .......... ....      ..+|+.++.||+.+|+.||.+|
T Consensus       252 ~~~~~~~~~~~f~~C------~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  252 LSSPEADPEWDFSRC------RDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             CCGGGSTSGGGGTTS------S---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCccccccccchhc------CCcCHHHHHHHHHHccCCcccC
Confidence            7663322221 1111      2579999999999999999988

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.65  E-value=1.1e-16  Score=165.68  Aligned_cols=209  Identities=14%  Similarity=0.151  Sum_probs=148.9

Q ss_pred             CccccCcCCCCCccccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHHHHHHhcCCCc
Q 039021          113 PLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPN  190 (464)
Q Consensus       113 p~~~~~~~~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~l~~l~hpn  190 (464)
                      |.........+.+.....+.+|..++.|..|+||.||..+++  .+.+|+|+ ++..+       .++  .++.....|.
T Consensus        64 p~~~~s~~~~~as~~~p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-------ilR--nilt~a~npf  133 (1205)
T KOG0606|consen   64 PMTDESPESRGASRRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-------ILR--NILTFAGNPF  133 (1205)
T ss_pred             CCCCCCcccccccccCCCccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-------hhh--ccccccCCcc
Confidence            333333444455677788889999999999999999999886  77888844 33211       011  1333334444


Q ss_pred             eeeeeceeeeCCceEEEEEecCCCChHHHHhhccCCCHHH--HHHHHHHHHh--------hhcccCCCceeEecchhhhh
Q 039021          191 ILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPT--ALRYALDIAR--------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       191 Iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~--~~~~~~qi~~--------Nill~~~~~~kl~DFG~a~~  260 (464)
                      +|                     ||-...++.-++++..-  +..|+.....        |++|+.-|++|+.|||+++.
T Consensus       134 vv---------------------gDc~tllk~~g~lPvdmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~  192 (1205)
T KOG0606|consen  134 VV---------------------GDCATLLKNIGPLPVDMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKK  192 (1205)
T ss_pred             ee---------------------chhhhhcccCCCCcchhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhh
Confidence            44                     56666676655555544  3334333321        99999999999999999876


Q ss_pred             hcc------------------cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcccccc
Q 039021          261 YEQ------------------IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN  322 (464)
Q Consensus       261 ~~~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~  322 (464)
                      .-.                  .....+||+.|.|||++....|...+|+|++|+++||.+.|..||.+...+.+.-....
T Consensus       193 GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis  272 (1205)
T KOG0606|consen  193 GLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS  272 (1205)
T ss_pred             hhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh
Confidence            421                  11234599999999999999999999999999999999999999999874444333322


Q ss_pred             CCCCccC--CCCcHHHHHHHHHHcccCCCCCC
Q 039021          323 FEPKFQI--SRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       323 ~~~~~~~--~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      ....|+.  ...++++++++.++|+.+|..|-
T Consensus       273 d~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  273 DDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            2333332  44789999999999999999995

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.65  E-value=3.9e-16  Score=159.81  Aligned_cols=108  Identities=23%  Similarity=0.221  Sum_probs=101.2

Q ss_pred             CccCCCCCCcc-cchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            4 DAAASGDFDMQ-VIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~-g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .|++.+..|.. |.||||+|+..|+.++++.|++.|+++|.+|..|+||||.|+..|+.+++++|++.|++++.+|..|.
T Consensus       156 ~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~  235 (477)
T PHA02878        156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGN  235 (477)
T ss_pred             cCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCC
Confidence            46777888888 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc-CchHHHHHHhcccCcccccc
Q 039021           83 TPLTDARLY-GHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        83 tpl~~A~~~-g~~~iv~~L~~~g~~~~~~~  111 (464)
                      ||||+|+.. ++.+++++|+++|++.+..+
T Consensus       236 TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~  265 (477)
T PHA02878        236 TPLHISVGYCKDYDILKLLLEHGVDVNAKS  265 (477)
T ss_pred             CHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence            999999975 68999999999999876543

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.65  E-value=7.6e-16  Score=139.41  Aligned_cols=104  Identities=15%  Similarity=0.103  Sum_probs=81.1

Q ss_pred             CCCCcccchHHHHHHHc--CCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHc---CCHHHHHHhhccCCCcccccCCCC
Q 039021            9 GDFDMQVIGNFLSFASR--GDRVGLNQMLREGTSPNVQD-YDKRTALHLAASE---GHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~--g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      +..|..|.||||+|+..  |+.++++.|+++|+++|.++ ..|+||||+|+..   ++.+++++|+++|+++|.+|..|.
T Consensus        45 n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~  124 (209)
T PHA02859         45 NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGK  124 (209)
T ss_pred             hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCC
Confidence            45677888888888875  47888888888888888886 4788888887754   367888888888888888888888


Q ss_pred             CHHHHHHh--cCchHHHHHHhcccCccccccC
Q 039021           83 TPLTDARL--YGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        83 tpl~~A~~--~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||||+|+.  .++.+++++|+.+|++.+..+.
T Consensus       125 TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~  156 (209)
T PHA02859        125 NLLHMYMCNFNVRINVIKLLIDSGVSFLNKDF  156 (209)
T ss_pred             CHHHHHHHhccCCHHHHHHHHHcCCCcccccC
Confidence            88888764  4577888888888887655543

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.65  E-value=6.5e-16  Score=155.41  Aligned_cols=103  Identities=25%  Similarity=0.285  Sum_probs=92.3

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      +..+.+|.||||+|+..|+.++++.|+++|+|+|.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus        96 ~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A  175 (413)
T PHA02875         96 DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA  175 (413)
T ss_pred             ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence            34466789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHhcccCcccccc
Q 039021           89 RLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      +..|+.+++++|+++|++.+..+
T Consensus       176 ~~~g~~eiv~~Ll~~ga~~n~~~  198 (413)
T PHA02875        176 MAKGDIAICKMLLDSGANIDYFG  198 (413)
T ss_pred             HHcCCHHHHHHHHhCCCCCCcCC
Confidence            99999999999999998776544

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.63  E-value=7.9e-16  Score=166.80  Aligned_cols=110  Identities=22%  Similarity=0.157  Sum_probs=98.3

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHH-------------------------
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAAS-------------------------   57 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~-------------------------   57 (464)
                      ..|++.+..|.+|.||||+||..|+.++++.|+++|+|+|.+|.+|+||||.|+.                         
T Consensus       546 ~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~  625 (823)
T PLN03192        546 KAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDL  625 (823)
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchH
Confidence            3567789999999999999999999999999999999999999999999886555                         


Q ss_pred             ------cCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           58 ------EGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        58 ------~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                            .|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       626 L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~  686 (823)
T PLN03192        626 LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANT  686 (823)
T ss_pred             HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCC
Confidence                  4555667778889999999999999999999999999999999999998766554

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.63  E-value=1.6e-15  Score=137.33  Aligned_cols=109  Identities=16%  Similarity=0.110  Sum_probs=90.2

Q ss_pred             CccCCCCCC-cccchHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHH--cCCHHHHHHhhccCCCcccc
Q 039021            4 DAAASGDFD-MQVIGNFLSFASR---GDRVGLNQMLREGTSPNVQDYDKRTALHLAAS--EGHAPIVELLLQYKANLNLK   77 (464)
Q Consensus         4 ~~~~~~~~d-~~g~t~l~~a~~~---g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~--~g~~~~v~~Ll~~ga~~~~~   77 (464)
                      -+++.+..| ..|.||||+|+..   ++.++++.|+++|+|+|.+|.+|.||||+|+.  .++.+++++|+++|++++.+
T Consensus        75 ~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~  154 (209)
T PHA02859         75 NGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK  154 (209)
T ss_pred             CCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc
Confidence            456667776 4799999988753   47899999999999999999999999998875  46789999999999999999


Q ss_pred             cCCCCCHHHH-HHhcCchHHHHHHhcccCccccccC
Q 039021           78 DRWQRTPLTD-ARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        78 d~~g~tpl~~-A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |..|.||||. |...++.+++++|+++|++.+..+.
T Consensus       155 d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~  190 (209)
T PHA02859        155 DFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK  190 (209)
T ss_pred             cCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Confidence            9999999985 5567888999999999987765554

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.63  E-value=1.5e-15  Score=153.58  Aligned_cols=108  Identities=21%  Similarity=0.257  Sum_probs=101.2

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..|..|.|
T Consensus       113 ~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~t  192 (434)
T PHA02874        113 CGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGES  192 (434)
T ss_pred             CcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence            35667788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      |||+|+..|+.+++++|+++|++....+
T Consensus       193 pL~~A~~~g~~~iv~~Ll~~g~~i~~~~  220 (434)
T PHA02874        193 PLHNAAEYGDYACIKLLIDHGNHIMNKC  220 (434)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCcCCC
Confidence            9999999999999999999998755443

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.62  E-value=2e-15  Score=142.00  Aligned_cols=102  Identities=23%  Similarity=0.197  Sum_probs=81.1

Q ss_pred             CCcccchHH-HHHHHcCCHHHHHHHHHcCCCCCCcC----CCCChHhHHHHHcCCHHHHHHhhccCCCcccc-cCCCCCH
Q 039021           11 FDMQVIGNF-LSFASRGDRVGLNQMLREGTSPNVQD----YDKRTALHLAASEGHAPIVELLLQYKANLNLK-DRWQRTP   84 (464)
Q Consensus        11 ~d~~g~t~l-~~a~~~g~~~~~~~ll~~ga~~n~~d----~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~tp   84 (464)
                      .|..|.|++ |.|+..|+.++++.|+++|||+|.++    ..|.||||+|+..++.+++++|+++||++|.+ +..|.||
T Consensus        28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~Tp  107 (300)
T PHA02884         28 KNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP  107 (300)
T ss_pred             cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCH
Confidence            455666654 44555588888888888888888874    57888888888888888888888888888886 4578888


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||.|+..++.+++++|+.+|++.+..+.
T Consensus       108 Lh~Aa~~~~~eivklLL~~GAdin~kd~  135 (300)
T PHA02884        108 LYISVLHGCLKCLEILLSYGADINIQTN  135 (300)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence            8888888888888888888887766543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.61  E-value=8.6e-17  Score=166.81  Aligned_cols=224  Identities=20%  Similarity=0.182  Sum_probs=164.4

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCC--chHHHHHhHHHHHHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIY--HPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      ++...+.||++.|=+|.+|+++...|+||++-+...  .-....+++.+++ ...++|||.+.+.-+......-|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            466678999999999999999866699999876531  1122223333334 6667999999998887778888999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh--cccCC----
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY--EQIHP----  266 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~--~~~~~----  266 (464)
                      +.+ +|+|.|.-+.-+..-+...|+.|+++                  |||++.-.-+-|+||..-+-.  ....+    
T Consensus       103 vkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~  181 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFT  181 (1431)
T ss_pred             Hhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccce
Confidence            987 99999998888899999999999986                  999999888999999755422  22221    


Q ss_pred             ----CCcCCCCcccccccccCC-----------CCCcccchhHHHHHHHHHh-CCCCCCCCccchhcccccc-CCCCccC
Q 039021          267 ----NQENSQRNDNSSIASNVL-----------DDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVN-FEPKFQI  329 (464)
Q Consensus       267 ----~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~~~~~~~-~~~~~~~  329 (464)
                          +...-..|.|||-+....           .+++.||||+||++.||++ |.+||.-..  ...+...+ ..+....
T Consensus       182 fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ--L~aYr~~~~~~~e~~L  259 (1431)
T KOG1240|consen  182 FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ--LLAYRSGNADDPEQLL  259 (1431)
T ss_pred             EEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH--HHhHhccCccCHHHHH
Confidence                112345799999775421           4578999999999999998 888886433  11111111 1111100


Q ss_pred             CC-CcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          330 SR-CPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       330 ~~-~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      .. -+..++.||..|++.||++|.++++.++.
T Consensus       260 e~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  260 EKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            11 14578999999999999999999999987

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.61  E-value=5.2e-16  Score=142.36  Aligned_cols=105  Identities=25%  Similarity=0.215  Sum_probs=87.5

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCh------------------------------------
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREG-TSPNVQDYDKRT------------------------------------   50 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~g-a~~n~~d~~g~t------------------------------------   50 (464)
                      .|-.|.+|+|+||||+..+|.++|..||..| +|+|.+|+.|.|                                    
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~g  340 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHG  340 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhc
Confidence            4667888999999999999999999999886 578877775554                                    


Q ss_pred             --HhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHhcccC-ccccccC
Q 039021           51 --ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG-KDFIHDQ  112 (464)
Q Consensus        51 --~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~-~~~~~~~  112 (464)
                        +|++|+.+|+.++|+.||.+|||+|.+|..|.|+|++|+.+||.+|+++|+.... +..+.+.
T Consensus       341 QTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~  405 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDV  405 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecC
Confidence              4777899999999999999999999999999999999999999999999987644 3444444

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.61  E-value=1.8e-15  Score=134.71  Aligned_cols=123  Identities=17%  Similarity=0.104  Sum_probs=90.6

Q ss_pred             ccccccceeeeeEEeEE-eCceEEEEEeeccCCchHHH-----------------------HHhHHHH-HHHHhcCCCce
Q 039021          137 SSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYHPVKM-----------------------VLSAKDN-CKLRELRHPNI  191 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~-----------------------~~~~~~e-~~l~~l~hpnI  191 (464)
                      .+.||+|+||.||+|.. +|+.||+|+++.........                       ......| ++|.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            47899999999999998 49999999998643211110                       1122348 89999988776


Q ss_pred             eeeeceeeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeE
Q 039021          192 LQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKI  252 (464)
Q Consensus       192 v~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl  252 (464)
                      .....+ .. ...+|||||++|+++.......+.++..++..++.|++.                   |||++ ++.++|
T Consensus        82 ~~p~~~-~~-~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~L  158 (190)
T cd05147          82 PCPEPI-LL-KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYI  158 (190)
T ss_pred             CCCcEE-Ee-cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEE
Confidence            443322 22 223899999999887665444568999999999888765                   99998 478999


Q ss_pred             ecchhhhhhc
Q 039021          253 GEYWVQMFYE  262 (464)
Q Consensus       253 ~DFG~a~~~~  262 (464)
                      +|||+|....
T Consensus       159 iDFG~a~~~~  168 (190)
T cd05147         159 IDVSQSVEHD  168 (190)
T ss_pred             EEccccccCC
Confidence            9999997653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PHA02946 ankyin-like protein; Provisional

Probab=99.61  E-value=2.5e-15  Score=151.33  Aligned_cols=108  Identities=19%  Similarity=0.164  Sum_probs=89.9

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC--HHHHHHhhccCCCccc-ccCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH--APIVELLLQYKANLNL-KDRW   80 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~--~~~v~~Ll~~ga~~~~-~d~~   80 (464)
                      -|++.+..|.+|.||||+|+..|+.++++.||++|+|+|.+|..|+||||+|+..++  .+++++|+++|++++. .|..
T Consensus        61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~  140 (446)
T PHA02946         61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEE  140 (446)
T ss_pred             CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCC
Confidence            466778888889999999999999999999999999999999999999998887664  6888999999999885 6888


Q ss_pred             CCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           81 QRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        81 g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |.|||| |+..++.+++++|+.+|++.+..+.
T Consensus       141 g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~  171 (446)
T PHA02946        141 GCGPLL-ACTDPSERVFKKIMSIGFEARIVDK  171 (446)
T ss_pred             CCcHHH-HHHCCChHHHHHHHhccccccccCC
Confidence            889987 5566888888888888886655443

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.60  E-value=3.1e-15  Score=150.54  Aligned_cols=107  Identities=20%  Similarity=0.197  Sum_probs=100.6

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC-
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR-   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-   82 (464)
                      -|++.+..|.+|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..+..|. 
T Consensus       124 ~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~  203 (413)
T PHA02875        124 RGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCV  203 (413)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCc
Confidence            4677888899999999999999999999999999999999999999999999999999999999999999999998885 


Q ss_pred             CHHHHHHhcCchHHHHHHhcccCccccc
Q 039021           83 TPLTDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      ||+|+|+..|+.+++++|+++|++.+..
T Consensus       204 t~l~~A~~~~~~~iv~~Ll~~gad~n~~  231 (413)
T PHA02875        204 AALCYAIENNKIDIVRLFIKRGADCNIM  231 (413)
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence            7899999999999999999999987643

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.60  E-value=2.3e-15  Score=124.32  Aligned_cols=98  Identities=29%  Similarity=0.279  Sum_probs=91.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTS-PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRD   95 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~-~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~   95 (464)
                      .-+++|+..+.++.|+.||+..++ +|.+|.+|.||||.|+.+||.+||+.|+..||+.+++...|+||||.|+.+.+.+
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            457899999999999999999887 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCccccccCCc
Q 039021           96 ICRILEVNGGKDFIHDQPL  114 (464)
Q Consensus        96 iv~~L~~~g~~~~~~~~p~  114 (464)
                      ++-+|+++|++.+......
T Consensus       145 va~~LLqhgaDVnA~t~g~  163 (228)
T KOG0512|consen  145 VAGRLLQHGADVNAQTKGL  163 (228)
T ss_pred             HHHHHHhccCccccccccc
Confidence            9999999999987665533

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.60  E-value=2.8e-15  Score=130.60  Aligned_cols=107  Identities=19%  Similarity=0.128  Sum_probs=92.7

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCH----HHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHH---HHHhhccCCCcccc
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDR----VGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI---VELLLQYKANLNLK   77 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~----~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~---v~~Ll~~ga~~~~~   77 (464)
                      +.+.+..|.++.++||+||..|++    ++++.|++.|+++|.+|..|+||||+|+..|+.+.   +++|+.+|+++|.+
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~   89 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR   89 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC
Confidence            344566788899999999999998    45556778899999999999999999999998654   89999999999999


Q ss_pred             c-CCCCCHHHHHHhcCchHHHHHHhc-ccCcccccc
Q 039021           78 D-RWQRTPLTDARLYGHRDICRILEV-NGGKDFIHD  111 (464)
Q Consensus        78 d-~~g~tpl~~A~~~g~~~iv~~L~~-~g~~~~~~~  111 (464)
                      | ..|.||||+|+..++.+++++|+. .|++....+
T Consensus        90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d  125 (166)
T PHA02743         90 ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN  125 (166)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC
Confidence            8 589999999999999999999995 788765544

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.59  E-value=6.2e-15  Score=138.67  Aligned_cols=100  Identities=18%  Similarity=0.173  Sum_probs=90.4

Q ss_pred             CccCCCCC----CcccchHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCChHhHHHHHcCCHHHHHHhhccCCCccccc
Q 039021            4 DAAASGDF----DMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQ-DYDKRTALHLAASEGHAPIVELLLQYKANLNLKD   78 (464)
Q Consensus         4 ~~~~~~~~----d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~-d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d   78 (464)
                      -|++.+..    |..|.||||+|+..|+.++++.|+++|||+|.+ +..|.||||.|+..|+.+++++|+.+|++++.+|
T Consensus        55 ~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd  134 (300)
T PHA02884         55 LGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQT  134 (300)
T ss_pred             CCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence            45666665    458999999999999999999999999999986 4689999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHhcCchHHHHHHhcc
Q 039021           79 RWQRTPLTDARLYGHRDICRILEVN  103 (464)
Q Consensus        79 ~~g~tpl~~A~~~g~~~iv~~L~~~  103 (464)
                      ..|.||+|+|+..++.+++.++...
T Consensus       135 ~~G~TpL~~A~~~~~~~~~~~~~~~  159 (300)
T PHA02884        135 NDMVTPIELALMICNNFLAFMICDN  159 (300)
T ss_pred             CCCCCHHHHHHHhCChhHHHHhcCC
Confidence            9999999999998988888777643

>PHA02798 ankyrin-like protein; Provisional

Probab=99.59  E-value=3.3e-15  Score=153.27  Aligned_cols=109  Identities=19%  Similarity=0.146  Sum_probs=99.5

Q ss_pred             CCccCCCCCCcccchHHHHHHHc-----CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcC---CHHHHHHhhccCCCc
Q 039021            3 GDAAASGDFDMQVIGNFLSFASR-----GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEG---HAPIVELLLQYKANL   74 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~-----g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g---~~~~v~~Ll~~ga~~   74 (464)
                      ..|++.+..|..|.||||.|+.+     +..++++.|+++|+|+|.+|..|+||||+|+..+   +.+++++|+++|+++
T Consensus        59 ~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv  138 (489)
T PHA02798         59 NLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT  138 (489)
T ss_pred             HCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc
Confidence            45778889999999999998864     6789999999999999999999999999999986   689999999999999


Q ss_pred             ccccCCCCCHHHHHHhcCc---hHHHHHHhcccCcccccc
Q 039021           75 NLKDRWQRTPLTDARLYGH---RDICRILEVNGGKDFIHD  111 (464)
Q Consensus        75 ~~~d~~g~tpl~~A~~~g~---~~iv~~L~~~g~~~~~~~  111 (464)
                      +.+|..|.||||+|+..++   .+++++|+++|++.+..+
T Consensus       139 n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~  178 (489)
T PHA02798        139 TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHN  178 (489)
T ss_pred             cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccccc
Confidence            9999999999999999987   899999999999876543

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.59  E-value=4.2e-15  Score=155.02  Aligned_cols=81  Identities=16%  Similarity=0.203  Sum_probs=41.4

Q ss_pred             CCCCC-CcccchHHHHHHHc--CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC--HHHHHHhhccCCCcccccCCC
Q 039021            7 ASGDF-DMQVIGNFLSFASR--GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH--APIVELLLQYKANLNLKDRWQ   81 (464)
Q Consensus         7 ~~~~~-d~~g~t~l~~a~~~--g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~--~~~v~~Ll~~ga~~~~~d~~g   81 (464)
                      +.+.. |..|.||||+|+..  ++.++++.|+++|+|+|.+|..|+||||+|+..|+  .++|++|+++||++|.+|..|
T Consensus       168 DIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G  247 (764)
T PHA02716        168 NLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNG  247 (764)
T ss_pred             CcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            33443 44555555554332  34455555555555555555555555555555553  245555555555555555555


Q ss_pred             CCHHHH
Q 039021           82 RTPLTD   87 (464)
Q Consensus        82 ~tpl~~   87 (464)
                      .||||+
T Consensus       248 ~TPLh~  253 (764)
T PHA02716        248 MSPIMT  253 (764)
T ss_pred             CCHHHH
Confidence            555553

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.58  E-value=3.9e-15  Score=109.82  Aligned_cols=95  Identities=34%  Similarity=0.420  Sum_probs=88.1

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI   96 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i   96 (464)
                      -.+.|+.++|..+.|+..+..|.|+|.+- .|++|||+|+..|.++++++|+..||+++.+|+.|.|||..|...||..+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            45789999999999999999999998775 89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCccccccC
Q 039021           97 CRILEVNGGKDFIHDQ  112 (464)
Q Consensus        97 v~~L~~~g~~~~~~~~  112 (464)
                      +++|++.|++...+.+
T Consensus        83 VklLL~~GAdrt~~~P   98 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAP   98 (117)
T ss_pred             HHHHHHcCcccceeCC
Confidence            9999999998765544

>PHA03095 ankyrin-like protein; Provisional

Probab=99.58  E-value=5.9e-15  Score=151.15  Aligned_cols=110  Identities=20%  Similarity=0.152  Sum_probs=101.2

Q ss_pred             CCccCCCCCCcccchHHHHHHHcC---CHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcC-CHHHHHHhhccCCCccccc
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRG---DRVGLNQMLREGTSPNVQDYDKRTALHLAASEG-HAPIVELLLQYKANLNLKD   78 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g---~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g-~~~~v~~Ll~~ga~~~~~d   78 (464)
                      ..|++.+..|..|.||||+|+..|   +.++++.|++.|+|+|.+|..|+||||+|+..| +.+++++|+++|++++.+|
T Consensus        35 ~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~  114 (471)
T PHA03095         35 AAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD  114 (471)
T ss_pred             HcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence            346777888999999999999998   999999999999999999999999999999999 5999999999999999999


Q ss_pred             CCCCCHHHHHH--hcCchHHHHHHhcccCccccccC
Q 039021           79 RWQRTPLTDAR--LYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        79 ~~g~tpl~~A~--~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ..|.||||+|+  ..++.+++++|+++|++.+..+.
T Consensus       115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~  150 (471)
T PHA03095        115 KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDL  150 (471)
T ss_pred             CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCC
Confidence            99999999999  56688999999999998765544

>PHA03095 ankyrin-like protein; Provisional

Probab=99.58  E-value=6.3e-15  Score=150.93  Aligned_cols=102  Identities=20%  Similarity=0.114  Sum_probs=56.5

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCH--HHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDR--VGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~--~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      |++++..|..|.||||+||..|+.  ..++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus       212 g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~  291 (471)
T PHA03095        212 GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGN  291 (471)
T ss_pred             CCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence            344455555555555555555542  344455555555555555555555555555555555555555555555555555


Q ss_pred             CHHHHHHhcCchHHHHHHhcccCc
Q 039021           83 TPLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      ||||+|+..|+.++++.++.++++
T Consensus       292 tpl~~A~~~~~~~~v~~LL~~~~~  315 (471)
T PHA03095        292 TPLSLMVRNNNGRAVRAALAKNPS  315 (471)
T ss_pred             CHHHHHHHhCCHHHHHHHHHhCCC
Confidence            555555555555555555555543

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.58  E-value=7.6e-15  Score=150.29  Aligned_cols=107  Identities=18%  Similarity=0.133  Sum_probs=98.7

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHc-CCHHHHHHhhccCCCcccccC-CC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASE-GHAPIVELLLQYKANLNLKDR-WQ   81 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~-g~~~~v~~Ll~~ga~~~~~d~-~g   81 (464)
                      -|++.+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+.. ++.+++++|+++|++++.++. .|
T Consensus       190 ~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g  269 (477)
T PHA02878        190 YGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILG  269 (477)
T ss_pred             CCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCC
Confidence            4677788999999999999999999999999999999999999999999999976 789999999999999999886 79


Q ss_pred             CCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           82 RTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        82 ~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .||||+|  .++.+++++|+++|++.+..+.
T Consensus       270 ~TpLh~A--~~~~~~v~~Ll~~gadin~~d~  298 (477)
T PHA02878        270 LTALHSS--IKSERKLKLLLEYGADINSLNS  298 (477)
T ss_pred             CCHHHHH--ccCHHHHHHHHHCCCCCCCcCC
Confidence            9999999  5678999999999998876654

>PHA02795 ankyrin-like protein; Provisional

Probab=99.57  E-value=7.2e-15  Score=143.70  Aligned_cols=95  Identities=22%  Similarity=-0.038  Sum_probs=82.9

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcC-
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG-   92 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g-   92 (464)
                      .|.|++|.|+..++.++++.|+.+|||+|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..| 
T Consensus       187 ~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~  266 (437)
T PHA02795        187 IQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS  266 (437)
T ss_pred             hccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence            4677888888888889999999999999999999999999999999999999999999999999999999999998887 


Q ss_pred             -------chHHHHHHhcccCccc
Q 039021           93 -------HRDICRILEVNGGKDF  108 (464)
Q Consensus        93 -------~~~iv~~L~~~g~~~~  108 (464)
                             +.+++++|+++|++..
T Consensus       267 ~~~~~~~~~eIvelLL~~gadI~  289 (437)
T PHA02795        267 VIARRETHLKILEILLREPLSID  289 (437)
T ss_pred             cccccccHHHHHHHHHhCCCCCC
Confidence                   4689999988887554

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.57  E-value=4.3e-15  Score=136.40  Aligned_cols=100  Identities=30%  Similarity=0.317  Sum_probs=91.0

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhcc-CCCcccccCCCCCH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTP   84 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tp   84 (464)
                      +.+.+.--.|+|+|+.|+..|.+++|+.||..|||||.+|.+|.|+|+.||.+||.+++++||.. ++|+.+.|.+|.|+
T Consensus       331 nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTA  410 (452)
T KOG0514|consen  331 DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTA  410 (452)
T ss_pred             CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchh
Confidence            33334444799999999999999999999999999999999999999999999999999999965 89999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccC
Q 039021           85 LTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~  105 (464)
                      |.+|...||.+|.-+|..+..
T Consensus       411 l~IAleagh~eIa~mlYa~~n  431 (452)
T KOG0514|consen  411 LSIALEAGHREIAVMLYAHMN  431 (452)
T ss_pred             hhhHHhcCchHHHHHHHHHHH
Confidence            999999999999999876654

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.57  E-value=4.5e-15  Score=157.87  Aligned_cols=102  Identities=27%  Similarity=0.226  Sum_probs=96.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ++.....+..|.||||.|+..|++.+|+.||++|||++.+|+.|+||||.||..|+.+|+.+|+++||++|..|.+|.||
T Consensus       530 ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~Tp  609 (1143)
T KOG4177|consen  530 GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTP  609 (1143)
T ss_pred             CCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcch
Confidence            44456667789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCc
Q 039021           85 LTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      |++|...|+.++++.+...++.
T Consensus       610 L~iA~~lg~~~~~k~l~~~~~~  631 (1143)
T KOG4177|consen  610 LHIAVRLGYLSVVKLLKVVTAT  631 (1143)
T ss_pred             hHHHHHhcccchhhHHHhccCc
Confidence            9999999999999999998886

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.57  E-value=8.3e-15  Score=150.43  Aligned_cols=107  Identities=24%  Similarity=0.266  Sum_probs=81.7

Q ss_pred             CccCCCCCCcccchHHHHHH--HcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcC--CHHHHHHhhccCCCcccccC
Q 039021            4 DAAASGDFDMQVIGNFLSFA--SRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEG--HAPIVELLLQYKANLNLKDR   79 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~--~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g--~~~~v~~Ll~~ga~~~~~d~   79 (464)
                      .|++.+..|..|.||||+|+  ..|+.++++.|+++|++++.+|..|+||||.|+..|  +.+++++|+++|++++.+|.
T Consensus        95 ~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~  174 (480)
T PHA03100         95 YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNR  174 (480)
T ss_pred             CCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccC
Confidence            34555677777777887777  777777777777777777777777778888877777  77777777777777777777


Q ss_pred             CCCCHHHHHHhcCchHHHHHHhcccCccccc
Q 039021           80 WQRTPLTDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        80 ~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      .|.||||+|+..|+.+++++|+++|++....
T Consensus       175 ~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  205 (480)
T PHA03100        175 YGYTPLHIAVEKGNIDVIKFLLDNGADINAG  205 (480)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCccCC
Confidence            7777888777777777777777777765544

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.55  E-value=1.6e-14  Score=148.38  Aligned_cols=105  Identities=22%  Similarity=0.258  Sum_probs=56.6

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC------ChHhHHHHHcCC--HHHHHHhhccCCCcccc
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDK------RTALHLAASEGH--APIVELLLQYKANLNLK   77 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g------~t~lh~A~~~g~--~~~v~~Ll~~ga~~~~~   77 (464)
                      ++.+..|..|.||||+|+..|+.++++.|+++|++++..+..|      .||||.|+..|+  .+++++|+++|++++.+
T Consensus       167 ~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~  246 (480)
T PHA03100        167 VDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIK  246 (480)
T ss_pred             CCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCC
Confidence            3334444455555555555555555555555555555555555      455555555555  55555555555555555


Q ss_pred             cCCCCCHHHHHHhcCchHHHHHHhcccCccccc
Q 039021           78 DRWQRTPLTDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        78 d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      |..|.||||+|+..|+.+++++|+++|++.+..
T Consensus       247 d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~  279 (480)
T PHA03100        247 DVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLV  279 (480)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence            555555555555555555555555555544433

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.55  E-value=3.5e-14  Score=126.83  Aligned_cols=123  Identities=13%  Similarity=0.082  Sum_probs=92.2

Q ss_pred             ccccccceeeeeEEeEEe-CceEEEEEeeccCCchH-----------------------HHHHhHHHH-HHHHhcCCCce
Q 039021          137 SSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPV-----------------------KMVLSAKDN-CKLRELRHPNI  191 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~-----------------------~~~~~~~~e-~~l~~l~hpnI  191 (464)
                      .+.||+|+||.||+|.+. |+.||+|+++.......                       .....+..| +.+.++.|++|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            578999999999999985 99999999986532100                       012234577 89999999987


Q ss_pred             eeeeceeeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeE
Q 039021          192 LQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKI  252 (464)
Q Consensus       192 v~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl  252 (464)
                      .....+...  ..+|||||++|+++.........++..++..++.|++.                   |||++ ++.++|
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~l  158 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYI  158 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEE
Confidence            544433332  24899999998866544333457888899899999876                   99998 789999


Q ss_pred             ecchhhhhhc
Q 039021          253 GEYWVQMFYE  262 (464)
Q Consensus       253 ~DFG~a~~~~  262 (464)
                      +|||+|+...
T Consensus       159 iDFG~a~~~~  168 (190)
T cd05145         159 IDVSQAVELD  168 (190)
T ss_pred             EEcccceecC
Confidence            9999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.54  E-value=2.3e-15  Score=146.08  Aligned_cols=154  Identities=18%  Similarity=0.192  Sum_probs=115.0

Q ss_pred             ceEEEEEecCCCChHHHHhhc---cCCCHHHHHHHHHHHHh---------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKK---VRLDLPTALRYALDIAR---------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~---------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+||.|++|...+|.++|+.+   ...++...+.++.|++.               ||+...+..+||.|||+.......
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~  409 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKD  409 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecccC
Confidence            589999999999999999754   35677788888999983               999988899999999998776533


Q ss_pred             C---------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchhccccccCCC-CccCCCCc
Q 039021          265 H---------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFEP-KFQISRCP  333 (464)
Q Consensus       265 ~---------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~  333 (464)
                      .         ....||..||+||++.+..|+.|+||||||++|+|++. -..+|....  ....+..+..| .+. .+. 
T Consensus       410 ~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~--t~~d~r~g~ip~~~~-~d~-  485 (516)
T KOG1033|consen  410 ETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA--TLTDIRDGIIPPEFL-QDY-  485 (516)
T ss_pred             CcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH--hhhhhhcCCCChHHh-hcC-
Confidence            3         23349999999999999999999999999999999997 444443221  11112222222 221 223 


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ++-+.|+.+++...|.+||++.+...+
T Consensus       486 p~e~~ll~~lls~~p~~RP~~~~~~~~  512 (516)
T KOG1033|consen  486 PEEYTLLQQLLSPSPEERPSAIEVALH  512 (516)
T ss_pred             cHHHHHHHHhcCCCcccCchHHHHhhh
Confidence            345799999999999999966555433

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.54  E-value=2e-14  Score=150.06  Aligned_cols=85  Identities=21%  Similarity=0.176  Sum_probs=47.0

Q ss_pred             cCCHHHHHHHHHcC-CCCCCc-CCCCChHhHHHHHc--CCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCc--hHHHH
Q 039021           25 RGDRVGLNQMLREG-TSPNVQ-DYDKRTALHLAASE--GHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH--RDICR   98 (464)
Q Consensus        25 ~g~~~~~~~ll~~g-a~~n~~-d~~g~t~lh~A~~~--g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~--~~iv~   98 (464)
                      .++.++++.|+++| +|+|.+ |..|+||||.|+..  ++.+++++|+++|+++|.+|..|.||||+|+..|+  .++++
T Consensus       152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk  231 (764)
T PHA02716        152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK  231 (764)
T ss_pred             CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence            35555555555555 555555 55555555555432  34555555555555555555555555555555553  25555


Q ss_pred             HHhcccCcccc
Q 039021           99 ILEVNGGKDFI  109 (464)
Q Consensus        99 ~L~~~g~~~~~  109 (464)
                      +|+++|++.+.
T Consensus       232 lLLe~GADVN~  242 (764)
T PHA02716        232 KIIELGGDMDM  242 (764)
T ss_pred             HHHHcCCCCCC
Confidence            55555555443

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.54  E-value=1.3e-14  Score=145.86  Aligned_cols=101  Identities=30%  Similarity=0.292  Sum_probs=94.3

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhc-cC-CCcccccCCCCCHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ-YK-ANLNLKDRWQRTPL   85 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~-~g-a~~~~~d~~g~tpl   85 (464)
                      .++.|.+|.||||+||..|+.+.++.|+..|+++|.++.++.||||.||..|+.++|+-||+ .| ...|..|..|.|||
T Consensus       266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpL  345 (929)
T KOG0510|consen  266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPL  345 (929)
T ss_pred             hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCch
Confidence            47889999999999999999999999999999999999999999999999999999999998 44 44788999999999


Q ss_pred             HHHHhcCchHHHHHHhcccCccc
Q 039021           86 TDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      |.|+..||..++++|++.|+...
T Consensus       346 Hlaa~~gH~~v~qlLl~~GA~~~  368 (929)
T KOG0510|consen  346 HLAAKSGHDRVVQLLLNKGALFL  368 (929)
T ss_pred             hhhhhcCHHHHHHHHHhcChhhh
Confidence            99999999999999999999654

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.54  E-value=5e-15  Score=140.19  Aligned_cols=104  Identities=24%  Similarity=0.233  Sum_probs=97.1

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHh
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL   90 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   90 (464)
                      ..-+|-+||.-|+..|++++|+.|+.+||++|.......|||--||.-||.++|++|+++|+|++..|+.|.|.||+|+.
T Consensus        80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~y  159 (615)
T KOG0508|consen   80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACY  159 (615)
T ss_pred             cccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeec
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHhcccCccccccCCc
Q 039021           91 YGHRDICRILEVNGGKDFIHDQPL  114 (464)
Q Consensus        91 ~g~~~iv~~L~~~g~~~~~~~~p~  114 (464)
                      .||.+|+++|++.|++.+.++...
T Consensus       160 kGh~~I~qyLle~gADvn~ks~kG  183 (615)
T KOG0508|consen  160 KGHVDIAQYLLEQGADVNAKSYKG  183 (615)
T ss_pred             cCchHHHHHHHHhCCCcchhcccC
Confidence            999999999999999887766543

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.52  E-value=4.8e-14  Score=142.66  Aligned_cols=108  Identities=19%  Similarity=0.167  Sum_probs=87.0

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCC------------
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA------------   72 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga------------   72 (464)
                      +...+..+.+|.||||.|+..|+.++++.|++.|+++|..+..|.||||.|+..|+.+++++|+++|+            
T Consensus        25 ~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~  104 (434)
T PHA02874         25 GNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEK  104 (434)
T ss_pred             CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCH
Confidence            44456667788888888888888888888888888888888888888888888888888888876654            


Q ss_pred             -----------CcccccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           73 -----------NLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        73 -----------~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                                 +++.+|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~  155 (434)
T PHA02874        105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDD  155 (434)
T ss_pred             HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCC
Confidence                       4566788888888888888888888888888887655543

>PHA02917 ankyrin-like protein; Provisional

Probab=99.52  E-value=3.2e-14  Score=149.08  Aligned_cols=107  Identities=13%  Similarity=0.152  Sum_probs=93.3

Q ss_pred             CccCCCCCCcccchHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcC---------------------
Q 039021            4 DAAASGDFDMQVIGNFLSFASR---GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEG---------------------   59 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~---g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g---------------------   59 (464)
                      +++..+..|.+|.||||+|+..   |+.++++.||+.|++++.+|..|+||||.|+..|                     
T Consensus        21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~  100 (661)
T PHA02917         21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI  100 (661)
T ss_pred             ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC
Confidence            5667777899999999997554   8899999999999999999999999999887644                     


Q ss_pred             --------------CHHHHHHhhccCCCcccccCCCCCHHHHHH--hcCchHHHHHHhcccCccccc
Q 039021           60 --------------HAPIVELLLQYKANLNLKDRWQRTPLTDAR--LYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        60 --------------~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~--~~g~~~iv~~L~~~g~~~~~~  110 (464)
                                    +.++|++|+++|+++|.+|..|.||||.|+  ..|+.+++++|+++|++.+..
T Consensus       101 ~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~  167 (661)
T PHA02917        101 NDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYE  167 (661)
T ss_pred             CCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccc
Confidence                          457788999999999999999999999543  578999999999999987644

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.52  E-value=4.4e-14  Score=151.00  Aligned_cols=109  Identities=25%  Similarity=0.148  Sum_probs=82.3

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC-HHHHHHhhccCCCcccccCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH-APIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~-~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|++++..+..|.||||+|+..+. ..++++|+++|+++|.+|..|.
T Consensus       364 ~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~  443 (682)
T PHA02876        364 LGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLS  443 (682)
T ss_pred             cCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCC
Confidence            355666777777777777777777777777777777777777777777777776554 4567778888888888888888


Q ss_pred             CHHHHHHhcC-chHHHHHHhcccCccccccC
Q 039021           83 TPLTDARLYG-HRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        83 tpl~~A~~~g-~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||||+|+..+ +.+++++|+++|++.+..+.
T Consensus       444 TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~  474 (682)
T PHA02876        444 TPLHYACKKNCKLDVIEMLLDNGADVNAINI  474 (682)
T ss_pred             hHHHHHHHhCCcHHHHHHHHHCCCCCCCCCC
Confidence            8888888765 56888888888887665554

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=9.2e-14  Score=130.11  Aligned_cols=170  Identities=18%  Similarity=0.255  Sum_probs=124.4

Q ss_pred             CCCceeeeeceeeeC---------------------------CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHH
Q 039021          187 RHPNILQFLGSIVLG---------------------------EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA  239 (464)
Q Consensus       187 ~hpnIv~~~~~~~~~---------------------------~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~  239 (464)
                      +|||||++.++|.+.                           ..+|+||...+. +|..++-.+ ..+....+-++.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHH
Confidence            699999999988641                           237999998876 999999654 566667777888887


Q ss_pred             h------------------hhcc--cCCC--ceeEecchhhhhhcc---------cCCCCcCCCCcccccccccCC----
Q 039021          240 R------------------NLLQ--DEGD--HLKIGEYWVQMFYEQ---------IHPNQENSQRNDNSSIASNVL----  284 (464)
Q Consensus       240 ~------------------Nill--~~~~--~~kl~DFG~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~----  284 (464)
                      +                  |||+  |+++  .+.|+|||.+-....         ......|...-||||+....+    
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a  431 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA  431 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence            6                  9997  4444  488999998643321         222334888899999886432    


Q ss_pred             -CC-CcccchhHHHHHHHHHhCCCCCCCCc---cchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHH
Q 039021          285 -DD-TKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVII  359 (464)
Q Consensus       285 -~~-~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~  359 (464)
                       .+ .|+|.|+.|.+.||++....||....   .+... ......|..+ ..+|+.+.+++...|+.||++|++..-...
T Consensus       432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp-~~vpp~~rqlV~~lL~r~pskRvsp~iAAN  509 (598)
T KOG4158|consen  432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-YQESQLPALP-SRVPPVARQLVFDLLKRDPSKRVSPNIAAN  509 (598)
T ss_pred             eeccchhhhhhhhhhHHHHhccCCcccccchheechhh-hhhhhCCCCc-ccCChHHHHHHHHHhcCCccccCCccHHHh
Confidence             12 58999999999999999999997743   12222 2222334444 679999999999999999999998655444


Q ss_pred             H
Q 039021          360 T  360 (464)
Q Consensus       360 ~  360 (464)
                      .
T Consensus       510 v  510 (598)
T KOG4158|consen  510 V  510 (598)
T ss_pred             H
Confidence            3

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.51  E-value=6.2e-14  Score=123.96  Aligned_cols=172  Identities=13%  Similarity=0.094  Sum_probs=117.6

Q ss_pred             cccccccceeeeeEEeEEeCceEEEEEeeccCCchHH-HHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEEecC
Q 039021          136 HSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVK-MVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       136 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      +...|++|+||+||.+...+..++.+.+......... ....+.+| ++|++|+ |++|++++++    +..+++|||+.
T Consensus         6 ~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             cceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            4578999999999988877888988887754221111 12257889 9999995 5889999886    34699999999


Q ss_pred             CCChHHHHhhccCCC-HHHHHHHHHHHHh------------hhcccCCCceeEecchhhhhhcccCC-------------
Q 039021          213 KGNLKGILSKKVRLD-LPTALRYALDIAR------------NLLQDEGDHLKIGEYWVQMFYEQIHP-------------  266 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~-~~~~~~~~~qi~~------------Nill~~~~~~kl~DFG~a~~~~~~~~-------------  266 (464)
                      |.+|.+.+... .+. ..++...+.++-+            |||++.++.++|+|||+|........             
T Consensus        82 G~~L~~~~~~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~l  160 (218)
T PRK12274         82 GAAMYQRPPRG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHL  160 (218)
T ss_pred             CccHHhhhhhh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHH
Confidence            99997654321 111 1111222222211            99999999999999999985442221             


Q ss_pred             ---CCcCCCCccccccccc-CCCC-CcccchhHHHHHHHHHhCCCCCCCCc
Q 039021          267 ---NQENSQRNDNSSIASN-VLDD-TKKDICSFGYIFYQMLEGKHLQTNNS  312 (464)
Q Consensus       267 ---~~~gt~~y~aPE~~~~-~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~  312 (464)
                         ....++.|+.|+...- ...+ ...+.++-|.-+|.++|+..|+....
T Consensus       161 lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        161 LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence               0116778888874432 1223 45688899999999999998876543

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.50  E-value=1.8e-14  Score=100.75  Aligned_cols=55  Identities=45%  Similarity=0.544  Sum_probs=31.3

Q ss_pred             HHHcC-CCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021           34 MLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus        34 ll~~g-a~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      ||++| +++|.+|..|.||||+||..|+.+++++|+..|++++.+|..|+||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            57777 88999999999999999999999999999999999999999999999886

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.50  E-value=3e-14  Score=122.80  Aligned_cols=106  Identities=15%  Similarity=0.166  Sum_probs=85.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCC--C-----CCCcCCCCChHhHHHHHcCCHH---HHHHhhccCCCc
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGT--S-----PNVQDYDKRTALHLAASEGHAP---IVELLLQYKANL   74 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga--~-----~n~~d~~g~t~lh~A~~~g~~~---~v~~Ll~~ga~~   74 (464)
                      ..-.+..|.+|.||||+|+..|+.  +.+++..+.  +     ++.+|.+|+||||+|+..|+.+   ++++|+++|+++
T Consensus         7 ~~~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi   84 (154)
T PHA02736          7 IIFASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI   84 (154)
T ss_pred             hhHHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc
Confidence            334467788999999999999984  333333332  2     3456899999999999999874   689999999999


Q ss_pred             cccc-CCCCCHHHHHHhcCchHHHHHHhcc-cCccccccC
Q 039021           75 NLKD-RWQRTPLTDARLYGHRDICRILEVN-GGKDFIHDQ  112 (464)
Q Consensus        75 ~~~d-~~g~tpl~~A~~~g~~~iv~~L~~~-g~~~~~~~~  112 (464)
                      +.+| ..|.||||+|+..++.+++++|+.+ |++.+..+.
T Consensus        85 n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~  124 (154)
T PHA02736         85 NGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNY  124 (154)
T ss_pred             cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccC
Confidence            9998 5999999999999999999999974 776655443

>PHA02946 ankyin-like protein; Provisional

Probab=99.49  E-value=1.1e-13  Score=139.51  Aligned_cols=106  Identities=14%  Similarity=0.125  Sum_probs=82.6

Q ss_pred             ccCCC-CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC--HHHHHHhhccCCCcccccCCC
Q 039021            5 AAASG-DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH--APIVELLLQYKANLNLKDRWQ   81 (464)
Q Consensus         5 ~~~~~-~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~--~~~v~~Ll~~ga~~~~~d~~g   81 (464)
                      |++.+ ..|.+|.|||| ||..|+.++++.|++.|+++|.+|..|+||||+|+..++  .+++++|+++|++++.+|..|
T Consensus       130 Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G  208 (446)
T PHA02946        130 GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG  208 (446)
T ss_pred             CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCC
Confidence            44444 35778888886 666788888888888888888888888888888876544  578888888888888888888


Q ss_pred             CCHHHHHHhcC--chHHHHHHhcccCccccccC
Q 039021           82 RTPLTDARLYG--HRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        82 ~tpl~~A~~~g--~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .||||+|+..+  +.+++++|+. |++.+..+.
T Consensus       209 ~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~  240 (446)
T PHA02946        209 NTPLHIVCSKTVKNVDIINLLLP-STDVNKQNK  240 (446)
T ss_pred             CCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCC
Confidence            88888888775  6678888774 676655543

>PHA02730 ankyrin-like protein; Provisional

Probab=99.49  E-value=8.6e-14  Score=142.65  Aligned_cols=109  Identities=11%  Similarity=0.068  Sum_probs=93.5

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCC----HHHHHHHHHcCC--CCCCcCCCCChHhHH---HHHcC---------CHHHH
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGD----RVGLNQMLREGT--SPNVQDYDKRTALHL---AASEG---------HAPIV   64 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~----~~~~~~ll~~ga--~~n~~d~~g~t~lh~---A~~~g---------~~~~v   64 (464)
                      +-||+.+. +..|.||||+|+..++    .++++.|+.+|+  ++|.+|..|+||||.   |...+         ..+++
T Consensus       367 s~GAdIN~-k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~iv  445 (672)
T PHA02730        367 DNGATMDK-TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVF  445 (672)
T ss_pred             HCCCCCCc-CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHH
Confidence            34666665 4789999999998875    899999999998  699999999999984   33332         23579


Q ss_pred             HHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           65 ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        65 ~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ++|+.+||++|.+|..|.||||+|+..++.+++++|+.+|++.+..+.
T Consensus       446 k~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~  493 (672)
T PHA02730        446 DILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR  493 (672)
T ss_pred             HHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence            999999999999999999999999999999999999999998877664

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=7.8e-13  Score=120.28  Aligned_cols=118  Identities=16%  Similarity=0.217  Sum_probs=93.8

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCCchH-----HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPV-----KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      +.||+|++|.||+|.+.|..|++|+.........     .....+.+| +++..+.|++|.....++.+.+..++||||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            5799999999999999999999998765432211     123456778 9999999999887777777778889999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      +|++|.+++.....    ....++.+++.                  |||++ ++.++|+|||.++.
T Consensus        82 ~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            99999999865422    66666777654                  99998 78899999998764

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.47  E-value=9.2e-14  Score=96.63  Aligned_cols=54  Identities=35%  Similarity=0.391  Sum_probs=44.2

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhh
Q 039021           15 VIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL   68 (464)
Q Consensus        15 g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll   68 (464)
                      |+|+||+|+..|+.++++.|++.|+|+|.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            689999999999999999999999999999999999999999999999999886

...

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.47  E-value=1.4e-13  Score=141.57  Aligned_cols=105  Identities=13%  Similarity=0.112  Sum_probs=77.9

Q ss_pred             CccCCCCCCcccchHHHHHHH------cCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHc---CCHHHHHHhhccCCCc
Q 039021            4 DAAASGDFDMQVIGNFLSFAS------RGDRVGLNQMLREGTSPNVQDYDKRTALHLAASE---GHAPIVELLLQYKANL   74 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~------~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~---g~~~~v~~Ll~~ga~~   74 (464)
                      .||+.+..+ .+.||||.|+.      .++.++++.|+++|||+|.+|..|+||||.|+..   ++.+++++|+++||++
T Consensus        59 ~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadi  137 (494)
T PHA02989         59 NGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINV  137 (494)
T ss_pred             cCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCc
Confidence            455555554 56788887764      4677788888888888888888888888877654   5678888888888888


Q ss_pred             -ccccCCCCCHHHHHHhc--CchHHHHHHhcccCcccc
Q 039021           75 -NLKDRWQRTPLTDARLY--GHRDICRILEVNGGKDFI  109 (464)
Q Consensus        75 -~~~d~~g~tpl~~A~~~--g~~~iv~~L~~~g~~~~~  109 (464)
                       +.+|..|.||||+|+..  ++.+++++|+++|++.+.
T Consensus       138 n~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~  175 (494)
T PHA02989        138 NDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE  175 (494)
T ss_pred             ccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence             67888888888877643  567888888888876554

>PHA02917 ankyrin-like protein; Provisional

Probab=99.47  E-value=2.1e-13  Score=142.98  Aligned_cols=105  Identities=15%  Similarity=0.028  Sum_probs=93.5

Q ss_pred             CccCCCCCCcccchHHHHHHHcC-----------------------CHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRG-----------------------DRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH   60 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g-----------------------~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~   60 (464)
                      .||+....|++|.||||.|+..+                       ..++++.|+.+|||+|.+|..|+||||+|+..++
T Consensus       385 ~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~  464 (661)
T PHA02917        385 EGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNK  464 (661)
T ss_pred             cCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCC
Confidence            45665556678999999987533                       3567899999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCcccccCCCCCHHHHHHh-cCchHHHHHHhcccCccc
Q 039021           61 APIVELLLQYKANLNLKDRWQRTPLTDARL-YGHRDICRILEVNGGKDF  108 (464)
Q Consensus        61 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~-~g~~~iv~~L~~~g~~~~  108 (464)
                      .+++++|+++|++++.+|..|.||||+|.. .++.+++++++.++++..
T Consensus       465 ~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        465 QSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence            999999999999999999999999999996 688999999999998664

>PHA02798 ankyrin-like protein; Provisional

Probab=99.47  E-value=1.7e-13  Score=140.72  Aligned_cols=109  Identities=20%  Similarity=0.181  Sum_probs=97.6

Q ss_pred             CCccCCCCCCcccchHHHHHHHcC---CHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC---HHHHHHhhccCCCccc
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRG---DRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH---APIVELLLQYKANLNL   76 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g---~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~---~~~v~~Ll~~ga~~~~   76 (464)
                      ..|++.+..|.+|.||||+|+..+   +.++++.|+++|+|+|.+|..|+||||+|+..++   .+++++|+++|++++.
T Consensus        97 ~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~  176 (489)
T PHA02798         97 ENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT  176 (489)
T ss_pred             HCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc
Confidence            457788999999999999999975   7899999999999999999999999999999998   9999999999999998


Q ss_pred             cc-CCCCCHHHHHHhc----CchHHHHHHhcccCcccccc
Q 039021           77 KD-RWQRTPLTDARLY----GHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        77 ~d-~~g~tpl~~A~~~----g~~~iv~~L~~~g~~~~~~~  111 (464)
                      ++ ..|.||+|.+...    ++.+++++|+++|++.+..+
T Consensus       177 ~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~  216 (489)
T PHA02798        177 HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKEN  216 (489)
T ss_pred             ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCC
Confidence            85 5788999988754    47899999999999766543

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.46  E-value=7.4e-14  Score=148.75  Aligned_cols=109  Identities=24%  Similarity=0.241  Sum_probs=97.9

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      +.....|.+++|.|+..+.+.++..++++|++++.++.+|.||||.||..|+.++|++|+++|++++++|+.|.||||.|
T Consensus       501 ~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~A  580 (1143)
T KOG4177|consen  501 NLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQA  580 (1143)
T ss_pred             CccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHH
Confidence            33345688888888888888889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHhcccCccccccCCcccc
Q 039021           89 RLYGHRDICRILEVNGGKDFIHDQPLTVR  117 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~~~~~~~p~~~~  117 (464)
                      +..|+.+|+++|+++|++++..+.-...+
T Consensus       581 a~~G~~~i~~LLlk~GA~vna~d~~g~Tp  609 (1143)
T KOG4177|consen  581 AQQGHNDIAELLLKHGASVNAADLDGFTP  609 (1143)
T ss_pred             HHcChHHHHHHHHHcCCCCCcccccCcch
Confidence            99999999999999999887776644433

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.46  E-value=1.7e-13  Score=140.81  Aligned_cols=109  Identities=10%  Similarity=0.056  Sum_probs=84.9

Q ss_pred             CccCC-CCCCcccchHHHHHHHc--CCHHHHHHHHHcCCCCCC-cCCCCChHhHHHHHcC----CHHHHHHhhccCCCcc
Q 039021            4 DAAAS-GDFDMQVIGNFLSFASR--GDRVGLNQMLREGTSPNV-QDYDKRTALHLAASEG----HAPIVELLLQYKANLN   75 (464)
Q Consensus         4 ~~~~~-~~~d~~g~t~l~~a~~~--g~~~~~~~ll~~ga~~n~-~d~~g~t~lh~A~~~g----~~~~v~~Ll~~ga~~~   75 (464)
                      -|++. +..|..|.||||+|+..  ++.++++.|+++|+|++. .+..|.||||.|+..+    +.+++++|+++|++++
T Consensus       133 ~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn  212 (494)
T PHA02989        133 KGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIE  212 (494)
T ss_pred             CCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcc
Confidence            45666 67788888888887654  678888888888888887 5778888888887654    7788888888877654


Q ss_pred             c--------------------------------------ccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           76 L--------------------------------------KDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        76 ~--------------------------------------~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .                                      +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       213 ~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~  287 (494)
T PHA02989        213 TNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSK  287 (494)
T ss_pred             ccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCC
Confidence            3                                      445688888888888888888888888887766554

>PHA02730 ankyrin-like protein; Provisional

Probab=99.45  E-value=2.6e-13  Score=139.20  Aligned_cols=99  Identities=15%  Similarity=0.103  Sum_probs=87.5

Q ss_pred             CCCCcccchHHHHHHHcC---CHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcC--CHHHHHHhhccCC--CcccccCCC
Q 039021            9 GDFDMQVIGNFLSFASRG---DRVGLNQMLREGTSPNVQDYDKRTALHLAASEG--HAPIVELLLQYKA--NLNLKDRWQ   81 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g---~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g--~~~~v~~Ll~~ga--~~~~~d~~g   81 (464)
                      ...|.+|.||||+|+..|   +.+++++||++|||+|++|..|+||||+|+..+  +.++|++|+++|+  +++..+..+
T Consensus        35 ~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~  114 (672)
T PHA02730         35 KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN  114 (672)
T ss_pred             hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC
Confidence            467889999999999997   599999999999999999999999999999977  7999999999965  458888889


Q ss_pred             CCHHHHHHh--cCchHHHHHHhc-ccCcc
Q 039021           82 RTPLTDARL--YGHRDICRILEV-NGGKD  107 (464)
Q Consensus        82 ~tpl~~A~~--~g~~~iv~~L~~-~g~~~  107 (464)
                      .+|++.++.  .++.+++++|+. .+.++
T Consensus       115 d~~l~~y~~s~n~~~~~vk~Li~~~~~~~  143 (672)
T PHA02730        115 DFDLYSYMSSDNIDLRLLKYLIVDKRIRP  143 (672)
T ss_pred             CchHHHHHHhcCCcHHHHHHHHHhcCCCh
Confidence            999998887  889999999996 44443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.45  E-value=3.3e-13  Score=146.46  Aligned_cols=97  Identities=32%  Similarity=0.397  Sum_probs=91.3

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      ..+.++.++||.||..|+.+.++.|++.|+|+|.+|..|+||||+||..|+.+++++|+++|+++|.+|..|.||||+|+
T Consensus       520 ~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~  599 (823)
T PLN03192        520 HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAI  599 (823)
T ss_pred             cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence            34456779999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchHHHHHHhcccCc
Q 039021           90 LYGHRDICRILEVNGGK  106 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~  106 (464)
                      ..|+.+++++|+..++.
T Consensus       600 ~~g~~~iv~~L~~~~~~  616 (823)
T PLN03192        600 SAKHHKIFRILYHFASI  616 (823)
T ss_pred             HhCCHHHHHHHHhcCcc
Confidence            99999999999977653

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.45  E-value=3.5e-13  Score=144.11  Aligned_cols=103  Identities=24%  Similarity=0.226  Sum_probs=55.2

Q ss_pred             cCCCCCCcccchHHHHHHHcC-CHHHHHHHHHcCCCCCCcCCCCChHhHHHHHc-CCHHHHHHhhccCCCcccccCCCCC
Q 039021            6 AASGDFDMQVIGNFLSFASRG-DRVGLNQMLREGTSPNVQDYDKRTALHLAASE-GHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g-~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~-g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      ++.+..|.+|.||||+|+..| +.+.++.|+..|+++|.+|..|+||||+|+.. ++.+++++|+++|++++.+|..|.|
T Consensus       298 adin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~T  377 (682)
T PHA02876        298 ADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKT  377 (682)
T ss_pred             CCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCC
Confidence            334444445555555555554 34555555555555555555555555555543 2345555555555555555555666


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      |||+|+..|+.+++++|+++|++..
T Consensus       378 pLh~Aa~~~~~~iv~~Ll~~gad~~  402 (682)
T PHA02876        378 PIHYAAVRNNVVIINTLLDYGADIE  402 (682)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCcc
Confidence            6666666666666666665555443

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.45  E-value=1.9e-13  Score=106.00  Aligned_cols=64  Identities=33%  Similarity=0.413  Sum_probs=59.9

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccccc
Q 039021           15 VIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD   78 (464)
Q Consensus        15 g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d   78 (464)
                      |.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus        26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   26 GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence            8899999999999999999999999999999999999999999999999999999999999875

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02795 ankyrin-like protein; Provisional

Probab=99.44  E-value=3.4e-13  Score=132.02  Aligned_cols=108  Identities=19%  Similarity=0.113  Sum_probs=88.0

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-----CCCChHhHHHHHcCCHHHHHHhhccCCCccc
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSP-NVQD-----YDKRTALHLAASEGHAPIVELLLQYKANLNL   76 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~-n~~d-----~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~   76 (464)
                      +-||+.+..  ++.||||+|+..|+.++++.|+.+|++. |..+     ..|.|++|.|+..++.+++++|+++||++|.
T Consensus       139 ~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~  216 (437)
T PHA02795        139 DHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ  216 (437)
T ss_pred             HCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc
Confidence            345555553  3478888888888888888888888743 3221     3477888888888999999999999999999


Q ss_pred             ccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           77 KDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        77 ~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       217 kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~  252 (437)
T PHA02795        217 LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMS  252 (437)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence            999999999999999999999999999998776665

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.43  E-value=2.7e-13  Score=136.56  Aligned_cols=108  Identities=25%  Similarity=0.207  Sum_probs=97.9

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHH-cC-CCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcc---ccc
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLR-EG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN---LKD   78 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~-~g-a~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~---~~d   78 (464)
                      -|++.+-.+.++.||||.||..|...+|+.||+ .| ..+|..|-.|.||||+|+..||.+++++|+..||..+   ..|
T Consensus       295 ~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D  374 (929)
T KOG0510|consen  295 FGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEAD  374 (929)
T ss_pred             cCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccc
Confidence            356667778899999999999999999999999 54 4589999999999999999999999999999999987   569


Q ss_pred             CCCCCHHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           79 RWQRTPLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        79 ~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      ..|.||||.|+..|+..+++.|+.+|++....+
T Consensus       375 ~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n  407 (929)
T KOG0510|consen  375 SDGNTALHLAAKYGNTSAVQKLISHGADIGVKN  407 (929)
T ss_pred             cCCchhhhHHHHhccHHHHHHHHHcCCceeecc
Confidence            999999999999999999999999999874433

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.43  E-value=4.9e-13  Score=141.49  Aligned_cols=229  Identities=17%  Similarity=0.202  Sum_probs=162.0

Q ss_pred             cccccccccccccccccceeeeeEEeEE-eCceEEEEEeeccCCchHHHHHhHHHHHHHHhcC---CCceeeeeceeeeC
Q 039021          126 NFDISELNTLHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELR---HPNILQFLGSIVLG  201 (464)
Q Consensus       126 ~i~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~l~~l~---hpnIv~~~~~~~~~  201 (464)
                      .+......|.+.+.||+|+||+||+|.. +|+.||+|+-+.....+     ....-+++.+|+   -+-|..++.++.-.
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~  766 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQ  766 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence            3444455688999999999999999997 59999999988754322     222224455554   23466666666667


Q ss_pred             CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccC-------CCceeEecch
Q 039021          202 EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDE-------GDHLKIGEYW  256 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~-------~~~~kl~DFG  256 (464)
                      +.-+||+||.+.|+|.+++...+.+++.....++.|+++                  |.||..       .-.++|+|||
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG  846 (974)
T ss_pred             CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence            778999999999999999998889999999999999987                  888742       2349999999


Q ss_pred             hhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCC
Q 039021          257 VQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR  331 (464)
Q Consensus       257 ~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  331 (464)
                      .|-...--.     ....+|-.+-.+|+..++.++.++|-|.|..++|-|+.|++.- ..+ .....+..+. +.+.   
T Consensus       847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-~~~-g~~~~~~~~~-~Ry~---  920 (974)
T KOG1166|consen  847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-VKN-GSSWMVKTNF-PRYW---  920 (974)
T ss_pred             cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-hcC-Ccceeccccc-hhhh---
Confidence            987654211     1233888999999999999999999999999999999997532 000 0000000000 1111   


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      --.-..+|...+|..|-..=|...+|...++.+.
T Consensus       921 ~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~  954 (974)
T KOG1166|consen  921 KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVL  954 (974)
T ss_pred             hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence            1234466777888754444477788877776664

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.42  E-value=4.6e-13  Score=119.41  Aligned_cols=98  Identities=23%  Similarity=0.226  Sum_probs=87.8

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPN-VQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n-~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      .|..|..|+++|.+|+..|+++.+++||+.|+|+| .++..+.||||+|+..|..++.++|++.|+.....|.-|+|+-.
T Consensus        38 vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaq  117 (396)
T KOG1710|consen   38 VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQ  117 (396)
T ss_pred             hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHH
Confidence            57789999999999999999999999999999988 45778899999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhcccC
Q 039021           87 DARLYGHRDICRILEVNGG  105 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~  105 (464)
                      .|+..|+.+++.++-.+-.
T Consensus       118 mAAFVG~H~CV~iINN~~t  136 (396)
T KOG1710|consen  118 MAAFVGHHECVAIINNHIT  136 (396)
T ss_pred             HHHHhcchHHHHHHhcccc
Confidence            9999999999988875544

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=3.8e-14  Score=146.59  Aligned_cols=233  Identities=17%  Similarity=0.144  Sum_probs=177.2

Q ss_pred             ccccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~  205 (464)
                      ...|.+.+.||+|+|+.|-.....   ...+|.|.+.... ...........| .+-+.+. |+|++++++...+.+..+
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            446788888999999999888762   4466777766543 223344455556 6666665 999999999999999999


Q ss_pred             EEEEecCCCChHHHH-hhcc-CCCHHHHHHHHHHHHh-------------------hhcccCCC-ceeEecchhhhhhcc
Q 039021          206 LITEYLPKGNLKGIL-SKKV-RLDLPTALRYALDIAR-------------------NLLQDEGD-HLKIGEYWVQMFYEQ  263 (464)
Q Consensus       206 lv~E~~~~g~L~~~l-~~~~-~l~~~~~~~~~~qi~~-------------------Nill~~~~-~~kl~DFG~a~~~~~  263 (464)
                      +++||..||++++.+ .... ..+...+-.++.|+..                   |.+++..+ .+|++|||+|..+..
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            999999999999998 5544 6777778888888854                   89999999 999999999998765


Q ss_pred             -cC-----CCCcC-CCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccch---hccccccCC-CCccCCC
Q 039021          264 -IH-----PNQEN-SQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDF---MHLKSVNFE-PKFQISR  331 (464)
Q Consensus       264 -~~-----~~~~g-t~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~---~~~~~~~~~-~~~~~~~  331 (464)
                       ..     ...+| ++.|+|||...+..| ....|+||.|+++.-+++|..||.......   ..+...... -..+...
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS  257 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc
Confidence             21     12338 999999999988544 578999999999999999999998765211   111111111 1112255


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ++....+++.+++..+|..|.+.+++-.+-+..
T Consensus       258 ~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~  290 (601)
T KOG0590|consen  258 ISDQAHDLLHKILKENPSNRLSIEELKLDNWLS  290 (601)
T ss_pred             CChhhhhcccccccCCchhcccccccccccccc
Confidence            788899999999999999999999987765544

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.42  E-value=2.4e-13  Score=121.27  Aligned_cols=103  Identities=23%  Similarity=0.216  Sum_probs=92.0

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      -|+..|..+....||||.||..|+.++|+.||+..+|+|+.+..|+||||+||..|...+.+-|+.+||-++.-|+.|.|
T Consensus        56 rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~t  135 (448)
T KOG0195|consen   56 RGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMT  135 (448)
T ss_pred             cccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCC
Confidence            46777888888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCc
Q 039021           84 PLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      |+..|...-...+.++..++|..
T Consensus       136 pldkakp~l~~~l~e~aek~gq~  158 (448)
T KOG0195|consen  136 PLDKAKPMLKNTLLEIAEKHGQS  158 (448)
T ss_pred             chhhhchHHHHHHHHHHHHhCCC
Confidence            99998765555556666566653

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.41  E-value=8.1e-13  Score=139.41  Aligned_cols=87  Identities=37%  Similarity=0.636  Sum_probs=84.8

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI   96 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i   96 (464)
                      +.|+.||..|+.+.++.|++.|+|+|.+|..|+||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            35889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcc
Q 039021           97 CRILEVN  103 (464)
Q Consensus        97 v~~L~~~  103 (464)
                      +++|+.+
T Consensus       164 v~~Ll~~  170 (664)
T PTZ00322        164 VQLLSRH  170 (664)
T ss_pred             HHHHHhC
Confidence            9999998

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.40  E-value=3.5e-13  Score=99.56  Aligned_cols=75  Identities=23%  Similarity=0.121  Sum_probs=69.8

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      .|++|||+||-.|++++++.|+..||+++.+|+.|.|||..|...||.+||++||..||+-..+.-.|.+.+..+
T Consensus        33 ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   33 GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            799999999999999999999999999999999999999999999999999999999999877777777766543

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=5e-13  Score=128.09  Aligned_cols=136  Identities=23%  Similarity=0.195  Sum_probs=105.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHH
Q 039021           18 NFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC   97 (464)
Q Consensus        18 ~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv   97 (464)
                      -|+-|+..|.++.|+..+..=-|+...+..|.|+||-|.-.||.+||+||++.|+++|+.|.+|+||||+|+..++..+|
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            46779999999999999988889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcccCccccccCCccccCcCCCCCccc---cccccccccccccccceeeeeEEeEE
Q 039021           98 RILEVNGGKDFIHDQPLTVRNEKDSNEVNF---DISELNTLHSSMVEQGVFGESQTAKW  153 (464)
Q Consensus        98 ~~L~~~g~~~~~~~~p~~~~~~~~~~~~~i---~~~~~~~~~~~~lg~G~~g~V~~~~~  153 (464)
                      +.|+++|+..+...-.............+-   .-...-|.+.+.+|.=.-|.||-..+
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vqesmG~mN~G~vYAlwd  691 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQESMGSMNKGVVYALWD  691 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHHHHhhcccccceeEEeec
Confidence            999999987654333222111122211111   11112255667778777888886654

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.39  E-value=4.6e-13  Score=128.31  Aligned_cols=100  Identities=18%  Similarity=0.126  Sum_probs=88.8

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccccc-CCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD-RWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~   82 (464)
                      ...++...+++|.|+||.|+-.||.++|+.|++.|+|||+.|.+||||||.||..+..-+++.|++.|+-|=+.. .++.
T Consensus       572 ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDme  651 (752)
T KOG0515|consen  572 EVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDME  651 (752)
T ss_pred             hhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeeccccc
Confidence            356788999999999999999999999999999999999999999999999999999999999999999876543 5677


Q ss_pred             CHHHHHH--hcCchHHHHHHhcc
Q 039021           83 TPLTDAR--LYGHRDICRILEVN  103 (464)
Q Consensus        83 tpl~~A~--~~g~~~iv~~L~~~  103 (464)
                      ||...+.  ..|...|.++|..-
T Consensus       652 Ta~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  652 TAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             chhhhcchhhhhHHHHHHHHHHH
Confidence            9988766  45788899998643

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.39  E-value=3.6e-12  Score=104.91  Aligned_cols=98  Identities=35%  Similarity=0.419  Sum_probs=92.3

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      ..|.+|.||||+|+..|+.++++.|++.|++.+.++..|.||||.|+..+..+++++|+..|++++..+..|.||+|+|+
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA   81 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchHHHHHHhcccCcc
Q 039021           90 LYGHRDICRILEVNGGKD  107 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~  107 (464)
                      ..++.+++++|+..+...
T Consensus        82 ~~~~~~~~~~L~~~~~~~   99 (126)
T cd00204          82 RNGNLDVVKLLLKHGADV   99 (126)
T ss_pred             HcCcHHHHHHHHHcCCCC
Confidence            999999999999987443

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PRK10345 hypothetical protein; Provisional

Probab=99.39  E-value=1.5e-12  Score=117.19  Aligned_cols=117  Identities=9%  Similarity=0.024  Sum_probs=82.7

Q ss_pred             cccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-----CCCceeeeeceeeeCC---ce
Q 039021          134 TLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-----RHPNILQFLGSIVLGE---EM  204 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-----~hpnIv~~~~~~~~~~---~~  204 (464)
                      +.-...||+|+||.||.-...+.. +||++....   ....+.+.+| .+++.+     +||||+++||+++++.   .+
T Consensus         4 L~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v   79 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV   79 (210)
T ss_pred             cCCcceecCCCceEEEECCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence            344578999999999962223444 688876532   2234568889 999999     6799999999999863   43


Q ss_pred             E-EEEEe--cCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCC----CceeEecchh
Q 039021          205 I-LITEY--LPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEG----DHLKIGEYWV  257 (464)
Q Consensus       205 ~-lv~E~--~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~----~~~kl~DFG~  257 (464)
                      + +||||  +.+|+|.+++.+. .+++..  .++.|++.                   |||++..    +.++|+||+.
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~~--~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQC-RYEEDV--AQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHcc-cccHhH--HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            4 78999  6689999999764 566552  23333332                   9999743    3799999543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.36  E-value=2.1e-12  Score=116.28  Aligned_cols=114  Identities=14%  Similarity=0.164  Sum_probs=86.2

Q ss_pred             ccccceeeeeEEeEEeCceEEEEEeeccCCch-----HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHP-----VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       139 ~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      .||+|+||.||+|.+.+..|++|.........     ......+.+| ++++.++|+++.....++...+..++||||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            48999999999999999999999976433211     1223567788 99999998876555555556677899999999


Q ss_pred             CCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          213 KGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      |++|.+++.....       .++.|+++                  ||+++ ++.+++.|||+++.
T Consensus        81 g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        81 GKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            9999998865322       34444433                  99998 78899999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=99.34  E-value=3.5e-12  Score=117.60  Aligned_cols=125  Identities=14%  Similarity=0.105  Sum_probs=92.0

Q ss_pred             ccccccccccceeeeeEEeE-E--eCceEEEEEeeccCCch---------------------HHHHHhHHHH-HHHHhcC
Q 039021          133 NTLHSSMVEQGVFGESQTAK-W--RGTWVVKTVIKSHIYHP---------------------VKMVLSAKDN-CKLRELR  187 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~-~--~~~~vavK~~~~~~~~~---------------------~~~~~~~~~e-~~l~~l~  187 (464)
                      .|.+.+.||+|+||.||+|. +  +|+.||+|+++......                     ......+..| ++++++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            37788999999999999998 3  58999999998543110                     0112345678 9999997


Q ss_pred             CC--ceeeeeceeeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccC
Q 039021          188 HP--NILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDE  246 (464)
Q Consensus       188 hp--nIv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~  246 (464)
                      +.  .+.++++.    ...+|||||++|++|.........+...++..++.|++.                   ||+++ 
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-  183 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-  183 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence            53  34444432    235899999999888776544456677777788888876                   89998 


Q ss_pred             CCceeEecchhhhhhc
Q 039021          247 GDHLKIGEYWVQMFYE  262 (464)
Q Consensus       247 ~~~~kl~DFG~a~~~~  262 (464)
                      ++.+||+|||.|....
T Consensus       184 ~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CCCEEEEEChhhhccC
Confidence            7889999999987554

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.33  E-value=2.3e-12  Score=89.49  Aligned_cols=54  Identities=44%  Similarity=0.550  Sum_probs=46.4

Q ss_pred             CChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHh
Q 039021           48 KRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE  101 (464)
Q Consensus        48 g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~  101 (464)
                      |+||||.||..|+.+++++|+++|++++.+|..|.||+|+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999999999999999999999999999999999885

...

>PHA02792 ankyrin-like protein; Provisional

Probab=99.33  E-value=2.5e-12  Score=130.69  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=59.4

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC--ChHhHHHHHcCCH---HHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           15 VIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDK--RTALHLAASEGHA---PIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        15 g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g--~t~lh~A~~~g~~---~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      +...++.||..|+.++++.|+++|||+|.+|..|  .||||.|+.....   +++++|+.+||++|.+|..|.||||+|+
T Consensus       339 ~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa  418 (631)
T PHA02792        339 HINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCI  418 (631)
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHH
Confidence            4445666666666666666666666666666553  4666665554443   2456666666666666666666666666


Q ss_pred             hcCchHHHHHHhcccCcccccc
Q 039021           90 LYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      ..++.+++++|+++|++.+..+
T Consensus       419 ~~~n~eivelLLs~GADIN~kD  440 (631)
T PHA02792        419 ESHSVSLVEWLIDNGADINITT  440 (631)
T ss_pred             HcCCHHHHHHHHHCCCCCCCcC
Confidence            6666666666666666554443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.33  E-value=1.4e-12  Score=91.14  Aligned_cols=51  Identities=27%  Similarity=0.277  Sum_probs=33.8

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLA   55 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A   55 (464)
                      ..+.+..|..|.||||+||..|+.++++.|++.|+|++.+|..|+||||+|
T Consensus         6 ~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    6 PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            467789999999999999999999999999999999999999999999997

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.33  E-value=7.2e-12  Score=129.85  Aligned_cols=118  Identities=15%  Similarity=0.191  Sum_probs=91.4

Q ss_pred             cccccccccceeeeeEEeEEeCceEEEEEeeccCCc-----hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYH-----PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      |...+.||+|+||+||++.+.+..+++|........     .....+.+.+| ++++.++|++|+..+.++.+....++|
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv  414 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV  414 (535)
T ss_pred             cCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence            466889999999999999997776666654332211     11234567889 999999999999888777777788999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      |||++|++|.+++.        ....++.|+++                  |||+ +++.++|+|||+++.
T Consensus       415 ~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        415 MEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             EEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            99999999999885        23445555544                  9999 678899999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	464
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-12
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-12
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-11
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-11
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-11
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		3e-10
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-10
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		4e-10
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-09
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		1e-09
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-09
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-09
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-09
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-09
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-09
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-09
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		2e-09
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-09
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		4e-09
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-09
2xee_A	157	Structural Determinants For Improved Thermal Stabil		4e-09
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		4e-09
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-09
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-09
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-09
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		5e-09
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		7e-09
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		7e-09
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		7e-09
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		7e-09
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		8e-09
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		9e-09
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-08
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-08
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-08
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		1e-08
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		1e-08
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		1e-08
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		1e-08
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-08
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-08
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-08
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-08
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-08
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		2e-08
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		2e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-08
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		3e-08
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-08
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		4e-08
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		5e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-08
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		5e-08
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		5e-08
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		7e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-07
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-07
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-07
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-07
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-07
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		2e-07
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-07
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-07
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-07
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-07
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-07
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-07
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		2e-07
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-07
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-07
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		4e-07
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-07
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		4e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		4e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-07
2xen_A	91	Structural Determinants For Improved Thermal Stabil		4e-07
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		4e-07
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-07
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-07
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-07
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-07
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-07
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		8e-07
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		9e-07
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-06
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-06
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-06
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-06
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		6e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-06
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		7e-06
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		7e-06
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		7e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-06
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-05
1uoh_A	226	Human Gankyrin Length = 226		1e-05
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		1e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-05
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-05
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		1e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-05
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-05
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-05
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-05
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-05
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-05
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-05
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-05
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-05
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-05
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-05
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		3e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-05
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		4e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		5e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-05
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		6e-05
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		7e-05
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		7e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		7e-05
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		7e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		7e-05
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		7e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		8e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		8e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		8e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		8e-05
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		8e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		8e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		9e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		9e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		9e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-04
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-04
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		3e-04
1dc2_A	156	Solution Nmr Structure Of Tumor Suppressor P16ink4a		3e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-04
1bi7_B	156	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-04
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		3e-04
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		3e-04
1d9s_A	136	Tumor Suppressor P15(Ink4b) Structure By Comparativ		3e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		4e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		4e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		4e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		4e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		4e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		4e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-04
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		5e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		5e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		6e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		6e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		6e-04
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		6e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-04
1ycs_B	239	P53-53bp2 Complex Length = 239		7e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		7e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		7e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		8e-04
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		8e-04
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		8e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		8e-04
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		9e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-04

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 37/284 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN 180
           D ++++    +LN      +  G FG    A+W G+ V   ++    +H  ++    ++ 
Sbjct: 28  DGDDMDIPWCDLNI--KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREV 85
Query: 181 CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK---KVRLDLPTALRYALD 237
             ++ LRHPNI+ F+G++     + ++TEYL +G+L  +L K   + +LD    L  A D
Sbjct: 86  AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 238 IAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS 277
           +A+                    NLL D+   +K+ ++ +         + + S      
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK-SAAGTPE 204
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPK-FQISRC 332
            +A  VL D     K D+ SFG I +++   +    N +     + +V F+ K  +I R 
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAAVGFKCKRLEIPRN 263
Query: 333 PN-RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCP 375
            N ++  +I  C   +P KRP+FA ++  L      L +SA+ P
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP----LIKSAVPP 303

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 114 LTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKM 173
           L  +   D ++++    +LN      +  G FG    A+W G+ V   ++    +H  ++
Sbjct: 21  LYFQGAMDGDDMDIPWCDLNI--KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV 78
Query: 174 VLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK---KVRLDLPT 230
               ++   ++ LRHPNI+ F+G++     + ++TEYL +G+L  +L K   + +LD   
Sbjct: 79  NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 231 ALRYALDIAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN 270
            L  A D+A+                    NLL D+   +K+ ++ +           + 
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 271 SQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPK 326
           +       +A  VL D     K D+ SFG I +++   +    N +     + +V F+ K
Sbjct: 199 AA-GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAAVGFKCK 256
Query: 327 -FQISRCPN-RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCP 375
             +I R  N ++  +I  C   +P KRP+FA ++  L      L +SA+ P
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP----LIKSAVPP 303

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
            +  A  G++  +  +L  G   N  D D +T LHLAA  GH  +V+LLL   A+ N KD
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 79  RWQRTPLTDARLYGHRDICRILEVNG----GKDFIHDQPLTVRNEKDSNEV 125
              +TPL  A   GH+++ ++L   G     KD     PL +  E    EV
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEV 118

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L +G  PN +D D RT LH AA  GH  IV+LLL   A+ N  D   RTPL  AR +G+
Sbjct: 89  LLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGN 148
Query: 94  RDICRILEVNGG 105
            +I ++LE  GG
Sbjct: 149 EEIVKLLEKQGG 160

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++ +G   N +D D RT LH AA EGH  IV+LL+   A++N  D   RTPL  AR +G+
Sbjct: 89  LISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGN 148
Query: 94  RDICRILEVNGG 105
            +I ++LE  GG
Sbjct: 149 EEIVKLLEKQGG 160

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G   N +D   +T LHLAA +GH  IVE+LL++ A++N  D+   TPL  A LYGH
Sbjct: 33  LMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGH 92
Query: 94  RDICRILEVNG 104
            +I  +L  NG
Sbjct: 93  LEIVEVLLKNG 103

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 19  FLSFAS-RGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
            L  AS +GD   +  +L+ G+ PNV+D+   T LH A + GH  +VELLLQ+KA +N  
Sbjct: 13  LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT 72
Query: 78  DRWQRTPLTDARLYGHRDICRIL 100
                +PL DA   GH DI ++L
Sbjct: 73  GYQNDSPLHDAAKNGHVDIVKLL 95

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N +D D  T LHLAA EGH  IVE+LL+  A++N +D++ +TP   A   GH
Sbjct: 87  LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGH 146
Query: 94  RDICRILE 101
            DI  +L+
Sbjct: 147 EDIAEVLQ 154

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++ +G   N +D D RT LH AA  GH  +V+LL+   A++N  D   RTPL  AR +G+
Sbjct: 89  LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN 148
Query: 94  RDICRILEVNGG 105
            ++ ++LE  GG
Sbjct: 149 EEVVKLLEKQGG 160

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +LR G   N  D +  T LHLAAS GH  IVE+LL+Y A++N KD    TPL  A  +GH
Sbjct: 54  LLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGH 113
Query: 94  RDICRILEVNGG 105
            +I  +L  +G 
Sbjct: 114 LEIVEVLLKHGA 125

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 195 QGCFGEV----WMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 249
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 309
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 310 ANILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 367 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 418
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 419 WRKDPEERPTFEYLQAFLED 438

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 17  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 71
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 72  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 131
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 132 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +         L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 189 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 240
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 241 WRKDPEERPTFEYLQAFLED 260

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 19  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 73
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 74  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 133
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 134 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +         L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 191 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 242
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 243 WRKDPEERPTFEYLQAFLED 262

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   ++++RH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A+R   + + ++L E G   N +D + RT LHLAA  GH  +V+LLL+  A++N KD
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
           +  RTPL  A   GH ++ ++L +  G D          N KD N
Sbjct: 66  KNGRTPLHLAARNGHLEVVKLL-LEAGADV---------NAKDKN 100

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A+R   + + ++L E G   N +D + RT LHLAA  GH  +V+LLL+  A++N KD
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           +  RTPL  A   GH ++ ++L
Sbjct: 66  KNGRTPLHLAARNGHLEVVKLL 87

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++ EY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N +D D  T LHLAA EGH  IVE+LL+  A++N +D++ +TP   A   G+
Sbjct: 87  LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGN 146
Query: 94  RDICRILE 101
            DI  +L+
Sbjct: 147 EDIAEVLQ 154

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N +D D  T LHLAA EGH  IVE+LL+  A++N KD+   TPL  A   GH
Sbjct: 66  LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 125
Query: 94  RDICRIL 100
            +I  +L
Sbjct: 126 LEIVEVL 132

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N +D D  T LHLAA  GH  IVE+LL+Y A++N +D +  TPL  A   GH
Sbjct: 66  LLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGH 125
Query: 94  RDICRILEVNG 104
            +I  +L  +G
Sbjct: 126 LEIVEVLLKHG 136

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 277 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 331
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG   K +RL         + + + Y   +        A
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 392 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 449 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 500
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 501 WRKEPEERPTFEYLQAFLED 520

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++ EY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++ EY+ KG+L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 18  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 72
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG   K +RL         + + + Y   +        A
Sbjct: 73  SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 132
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 133 ANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 190 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 241
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 242 WRKEPEERPTFEYLQAFLED 261

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A + D V +  ++  G   N  D    T LHLAA  GH  IVE+LL++ A++N +D W R
Sbjct: 24  AGQDDEVRI--LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGR 81
Query: 83  TPLTDARLYGHRDICRIL 100
           TPL  A   GH +I  +L
Sbjct: 82  TPLHLAATVGHLEIVEVL 99

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A + D V +  ++  G   N  D    T LHLAA  GH  IVE+LL++ A++N  D W R
Sbjct: 24  AGQDDEVRI--LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGR 81
Query: 83  TPLTDARLYGHRDICRIL 100
           TPL  A   GH +I  +L
Sbjct: 82  TPLHLAATVGHLEIVEVL 99

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 194 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 248
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG   K +RL         + + + Y   +        A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 309 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 366 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 418 WRKEPEERPTFEYLQAFLED 437

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 194 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 248
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG   K +RL         + + + Y   +        A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 309 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 366 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 418 WRKEPEERPTFEYLQAFLED 437

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N  D    T LHLAA  GH  IVE+LL++ A++N  D W  TPL  A + GH
Sbjct: 66  LLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGH 125
Query: 94  RDICRIL 100
            +I  +L
Sbjct: 126 LEIVEVL 132

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N +DY+  T LHLAA +GH  IVE+LL+Y A++N +D++ +T    +   G+
Sbjct: 99  LLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN 158
Query: 94  RDICRILE 101
            D+  IL+
Sbjct: 159 EDLAEILQ 166

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
           G +GE     W+  + +   +K+     +++    K+   ++E++HPN++Q LG   L  
Sbjct: 43  GQYGEVYVGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
              ++TEY+P GNL   L        +  V L + T +  A++             ARN 
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 161
Query: 243 LQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYI 297
           L  E   +K+ ++ +        Y      +   +     S+A N     K D+ +FG +
Sbjct: 162 LVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF-SIKSDVWAFGVL 220
Query: 298 F-----YQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP 352
                 Y M     +  +  +D +  K    E   Q   CP ++ +L+  C    P+ RP
Sbjct: 221 LWEIATYGMSPYPGIDLSQVYDLLE-KGYRME---QPEGCPPKVYELMRACWKWSPADRP 276
Query: 353 TFA 355
           +FA
Sbjct: 277 SFA 279

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 21  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 75
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+L    KG   K +RL         + + + Y   +        A
Sbjct: 76  SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 135
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 136 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +         L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 193 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 244
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 245 WRKEPEERPTFEYLQAFLED 264

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 28  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++ EY+ KG L    KG + K +RL         + + + Y   +        A
Sbjct: 83  SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             KDP +RPTF  +   LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A + D V +  ++  G   N  D    T LHLAA  GH  IVE+LL++ A++N  D W R
Sbjct: 24  AGQDDEVRI--LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGR 81
Query: 83  TPLTDARLYGHRDICRIL 100
           TPL  A   GH +I  +L
Sbjct: 82  TPLHLAATVGHLEIVEVL 99

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A R D V +  ++  G   N +D    T LHLAA  GH  IVE+LL+  A++N  D    
Sbjct: 24  AGRDDEVRI--LMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGM 81
Query: 83  TPLTDARLYGHRDICRILEVNG 104
           TPL  A L+GH +I  +L  NG
Sbjct: 82  TPLRLAALFGHLEIVEVLLKNG 103

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N  D    T LHLAA  GH  IVE+LL++ A++N  D W  TPL  A + GH
Sbjct: 66  LLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGH 125
Query: 94  RDICRIL 100
            +I  +L
Sbjct: 126 LEIVEVL 132

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 16  IGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
           +G  L  A+R  +    ++L    +P   D+   + LHLAA  GH    E+LL+   + +
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 76  LKDRWQRTPLTDARLYGHRDICRILEVNG----GKDFIHDQPLTVRNEKDSNEV 125
            + +  RTPL  A   GH +I  +L  +G     KD +    L    E +  EV
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV 115

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 25  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 79
Query: 200 LGEEMILITEYLPKGN----LKGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+    LKG   K +RL         + + + Y   +        A
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 140 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +         L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 197 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 248
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 249 WRKEPEERPTFEYLQAFLED 268

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A RG    +  +L+ G   N  DY   T LHLAA +GH  IVE+LL+Y A++N +D++ +
Sbjct: 88  AYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 83  TPLTDARLYGHRDICRILE 101
           T    +   G+ D+  IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 25  QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 79
Query: 200 LGEEMILITEYLPKGN----LKGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++TEY+ KG+    LKG   K +RL         + + + Y   +        A
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 140 ANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +         L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 197 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 248
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 249 WRKEPEERPTFEYLQAFLED 268

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 49/277 (17%)
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN 180
           D  ++NF +++LN  HS        GE    +W+G  +V  V+K   +   K     ++ 
Sbjct: 8   DFKQLNF-LTKLNENHS--------GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEEC 58
Query: 181 CKLRELRHPNILQFLGSI--VLGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYAL 236
            +LR   HPN+L  LG+          LIT ++P G+L  +L +     +D   A+++AL
Sbjct: 59  PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 237 DIARNL--------------------LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
           D+AR +                    + DE    +I    V+  +      Q   +    
Sbjct: 119 DMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF------QSPGRMYAP 172
Query: 277 SSIASNVL----DDTKK---DICSFGYIFYQML--EGKHLQTNNSFDFMHLKSVNFEPKF 327
           + +A   L    +DT +   D+ SF  + ++++  E      +N    M +      P  
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232
Query: 328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                P+ + +L+  C N+DP+KRP F  ++  LE++
Sbjct: 233 PPGISPH-VSKLMKICMNEDPAKRPKFDMIVPILEKM 268

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +DS++ +++I +        +  G FG     KW G   VK +   ++  P    L A  
Sbjct: 1   RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 56
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYAL 236
           N    LR+ RH NIL F+G      ++ ++T++    +L   L + + + ++   +  A 
Sbjct: 57  NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 115
Query: 237 DIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
             AR                  N+   E + +KIG++ +     +   + +  Q + +  
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 278 SIASNV--LDDT-----KKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSV-NFEPKF 327
            +A  V  + D+     + D+ +FG + Y+++ G+  +   NN    + +    +  P  
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 235
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
              R  CP R+K+L+A+C  K   +RP+F  ++  +EE++  L
Sbjct: 236 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A RG    +  +L+ G   N  D    T LHLAA  GH  IVE+LL+Y A++N +D++ +
Sbjct: 88  AKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 83  TPLTDARLYGHRDICRILE 101
           T    +   G+ D+  IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G   N  D D  T LHLAA  GH  IVE+LL+Y A++N +D +  TPL  A + GH
Sbjct: 33  LMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGH 92
Query: 94  RDICRILEVNGG 105
            +I  +L  +G 
Sbjct: 93  LEIVEVLLKHGA 104

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 38/260 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 198 IVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR---------------- 240
                ++ ++T++    +L   L + + + ++   +  A   AR                
Sbjct: 88  YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 241 --NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNV--LDDT-----KKD 290
             N+   E + +KIG++ +     +   + +  Q + +   +A  V  + D+     + D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSV-NFEPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP R+K+L+A+C  
Sbjct: 208 VYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLK 267
Query: 346 KDPSKRPTFAAVIITLEEVS 365
           K   +RP+F  ++  +EE++
Sbjct: 268 KKRDERPSFPRILAEIEELA 287

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N  D    T LHLAA+ GH  IVE+LL++ A++N  D    TPL  A  YGH
Sbjct: 66  LLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGH 125
Query: 94  RDICRIL 100
            +I  +L
Sbjct: 126 LEIVEVL 132

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +DS++ +++I +        +  G FG     KW G   VK +   ++  P    L A  
Sbjct: 13  RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 68
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYAL 236
           N    LR+ RH NIL F+G      ++ ++T++    +L   L + + + ++   +  A 
Sbjct: 69  NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 237 DIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
             AR                  N+   E + +KIG++ +     +   + +  Q + +  
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 278 SIASNV--LDDT-----KKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSV-NFEPKF 327
            +A  V  + D+     + D+ +FG + Y+++ G+  +   NN    + +    +  P  
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
              R  CP R+K+L+A+C  K   +RP+F  ++  +EE++  L
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 290

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GTW   T +      P  M   A  ++   +++LRH  ++Q L ++V
Sbjct: 194 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 248
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
             E + ++ EY+ KG+L    KG   K +RL         + + + Y   +        A
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
            N+L  E    K+ ++ +      I  N+  +++     I     +         K D+ 
Sbjct: 309 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
           SFG +  +      L T     +  +  VN E   Q+ R         CP  L  L+ QC
Sbjct: 366 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 344 TNKDPSKRPTFAAVIITLEE 363
             K+P +RPTF  +   LE+
Sbjct: 418 WRKEPEERPTFEYLQAFLED 437

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNIL 192
           + +H  ++ +G FG++     R T  V  + +   +         K+   +R L HPN+L
Sbjct: 11  DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 193 QFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALR--YALDIA----------- 239
           +F+G +   + +  ITEY+  G L+GI+ K +    P + R  +A DIA           
Sbjct: 71  KFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 240 -------RNLLQDEGDHLKIGEYWVQ--MFYEQIHPNQENSQRNDNSSIASNVLD----- 285
                   N L  E  ++ + ++ +   M  E+  P    S +  +      V+      
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 286 ----------DTKKDICSFGYIFYQMLEGKHLQTN---NSFDFMHLKSVNFEPKFQISRC 332
                     D K D+ SFG +  +++   +   +    + DF  L    F  ++    C
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRYCPPNC 248
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG 369
           P     +  +C + DP KRP+F  +   LE +   L 
Sbjct: 249 PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 35/284 (12%)
Query: 117 RNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLS 176
           R ++DS+   ++I     + S+ +  G FG     KW G   VK ++K     P +    
Sbjct: 22  RGQRDSS-YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVK-ILKVVDPTPEQFQAF 79
Query: 177 AKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYA 235
             +   LR+ RH NIL F+G +   + + ++T++    +L K +  ++ +  +   +  A
Sbjct: 80  RNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIA 138
Query: 236 LDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS 277
              A+                  N+   EG  +KIG++ +     +   +Q+  Q   + 
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 278 -SIASNVLD-------DTKKDICSFGYIFYQMLEGK----HLQTNNSFDFMHLKSVNFEP 325
             +A  V+          + D+ S+G + Y+++ G+    H+   +   FM  +      
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD 258
Query: 326 KFQISR-CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
             ++ + CP  +K+L+A C  K   +RP F  ++ ++E +   L
Sbjct: 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 20  LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++ ++V + + +L+ G S N +     T LHLAA EGHA +V LLL  +AN NL +
Sbjct: 216 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 275
Query: 79  RWQRTPLTDARLYGHRDICRILEVNG 104
           +   TPL      GH  +  +L  +G
Sbjct: 276 KSGLTPLHLVAQEGHVPVADVLIKHG 301

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A  G    + ++L +G   N +  D  T LHLAA  GHA IV+LLL   A++N + +   
Sbjct: 17  AKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN 76
Query: 83  TPLTDARLYGHRDICRILEVNGG 105
           TP   A+  GH +I ++L+  G 
Sbjct: 77  TPEHLAKKNGHHEIVKLLDAKGA 99

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
           D +  N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    
Sbjct: 4   DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLP 229
           K+   ++E++HPN++Q LG         +ITE++  GNL   L        S  V L + 
Sbjct: 63  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
           T +  A++             ARN L  E   +K+ ++ +        Y      +   +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
                S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R 
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
             CP ++ +L+  C   +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 41/227 (18%)
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMI-LITEYLPKGNLKGILSKKVR----------- 225
           ++   +R L HPN+L  +G ++  E +  ++  Y+  G+L   +    R           
Sbjct: 71  REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 226 LDLPTALRYALD--------IARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRND 275
           L +   + Y  +         ARN + DE   +K+ ++ +   +   + +  Q++  R+ 
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH--RHA 188
Query: 276 NSSIASNVLDD-------TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNF--- 323
              +    L+        TK D+ SFG + +++L       +  + FD  H  +      
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE-VSACLG 369
           +P++    CP+ L Q++ QC   DP+ RPTF  ++  +E+ VSA LG
Sbjct: 249 QPEY----CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L        S  V L + T +  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 269
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L        S  V L + T +  
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 390 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 446
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 447 KVYELMRACWQWNPSDRPSFAEI 469

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L        S  V L + T +  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
            ++ EL  L +  + +G FG+     +RG  V    IK+       +     +   + +L
Sbjct: 190 LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 243
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
           RH N++Q LG IV  EE   + ++TEY+ KG+L   L  + R  L     L+++LD+   
Sbjct: 244 RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                          ARN+L  E +  K+ ++ +          +E S   D   +    
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 352
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
            A   L +    TK D+ SFG + +++     +     +  + LK V    E  +++   
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 408
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             CP  +  ++  C + D + RPTF  +   LE +
Sbjct: 409 DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A R D V +  ++  G   N  D    T LHLAA  GH  IVE+LL+  A++N  D    
Sbjct: 24  AGRDDEVRI--LMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGS 81
Query: 83  TPLTDARLYGHRDICRILEVNG 104
           TPL  A  +GH +I  +L  NG
Sbjct: 82  TPLHLAAHFGHLEIVEVLLKNG 103

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
           D +  N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    
Sbjct: 4   DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
           K+   ++E++HPN++Q LG         +ITE++  GNL   L +         V L + 
Sbjct: 63  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
           T +  A++             ARN L  E   +K+ ++ +        Y      +   +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
                S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R 
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
             CP ++ +L+  C   +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N  D    T LHLAA +GH  IVE+LL++ A++N  DR   TPL  A L G 
Sbjct: 58  LLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQ 117
Query: 94  RDICRIL 100
            +I  +L
Sbjct: 118 LEIVEVL 124

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G   N +D+   T LHLAA  GH  IVE+LL+  A++N KD    TPL  A   GH
Sbjct: 33  LMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGH 92
Query: 94  RDICRILEVNG 104
            +I  +L  NG
Sbjct: 93  LEIVEVLLKNG 103

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A RG    +  +L+ G   N  D++  T LHLAA+ GH  IVE+LL++ A++N +D++ +
Sbjct: 88  ADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGK 147
Query: 83  TPLTDARLYGHRDICRILE 101
           T    +   G+ D+  IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
           D +  N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    
Sbjct: 4   DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
           K+   ++E++HPN++Q LG         +ITE++  GNL   L +         V L + 
Sbjct: 63  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
           T +  A++             ARN L  E   +K+ ++ +        Y      +   +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
                S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R 
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
             CP ++ +L+  C   +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
            ++ EL  L +  + +G FG+     +RG  V    IK+       +     +   + +L
Sbjct: 9   LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 62
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
           RH N++Q LG IV  EE   + ++TEY+ KG+L   L  + R  L     L+++LD+   
Sbjct: 63  RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                          ARN+L  E +  K+ ++ +          +E S   D   +    
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 171
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
            A   L +    TK D+ SFG + +++     +     +  + LK V    E  +++   
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 227
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             CP  + +++  C + D + RP+F  +   LE +
Sbjct: 228 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 20  LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L FA+  +RV + + +L+ G   + +D      LH A S GH  + ELL+++ A +N+ D
Sbjct: 48  LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSN 123
            W+ TPL +A   G  +IC++L  +G     K+   + PL +  + D++
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 156

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 20  LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L FA+  +RV + + +L+ G   + +D      LH A S GH  + ELL+++ A +N+ D
Sbjct: 46  LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSN 123
            W+ TPL +A   G  +IC++L  +G     K+   + PL +  + D++
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 154

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G   N  D    T LHLAA  GH  IVE+LL++ A+++  D +  TPL  A  +GH
Sbjct: 33  LMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGH 92
Query: 94  RDICRILEVNG 104
            +I  +L  NG
Sbjct: 93  LEIVEVLLKNG 103

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 20  LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L FA+  +RV + + +L+ G   + +D      LH A S GH  + ELL+++ A +N+ D
Sbjct: 50  LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSN 123
            W+ TPL +A   G  +IC++L  +G     K+   + PL +  + D++
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 158

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
            ++ EL  L +  + +G FG+     +RG  V    IK+       +     +   + +L
Sbjct: 18  LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 71
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
           RH N++Q LG IV  EE   + ++TEY+ KG+L   L  + R  L     L+++LD+   
Sbjct: 72  RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                          ARN+L  E +  K+ ++ +          +E S   D   +    
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 180
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
            A   L +    TK D+ SFG + +++     +     +  + LK V    E  +++   
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 236
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             CP  + +++  C + D + RP+F  +   LE +
Sbjct: 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
            ++ EL  L +  + +G FG+     +RG  V    IK+       +     +   + +L
Sbjct: 3   LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 56
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
           RH N++Q LG IV  EE   + ++TEY+ KG+L   L  + R  L     L+++LD+   
Sbjct: 57  RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                          ARN+L  E +  K+ ++ +          +E S   D   +    
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 165
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
            A   L +    TK D+ SFG + +++     +     +  + LK V    E  +++   
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 221
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             CP  + +++  C + D + RP+F  +   LE +
Sbjct: 222 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
           D +  N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    
Sbjct: 4   DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
           K+   ++E++HPN++Q LG         +ITE++  GNL   L +         V L + 
Sbjct: 63  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFY----EQIHPNQENS-Q 272
           T +  A++             ARN L  E   +K+ ++ +           H   +   +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
                S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R 
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
             CP ++ +L+  C   +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 241
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 43  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG 105
                PL  A  +G   +   L  NG 
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGA 129

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 184 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 240
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEI 263

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A R  R  + +ML   G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +
Sbjct: 38  LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG 105
                PL  A  +G   +   L  NG 
Sbjct: 98  EHGNVPLHYACFWGQDQVAEDLVANGA 124

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 66
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 187 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 243
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 244 KVYELMRACWQWNPSDRPSFAEI 266

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 308
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + +++     +      D   +  +  E  +++ R   CP 
Sbjct: 429 SLAYNKF-SIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 485
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLE 362
           ++ +L+  C   +PS RP+FA +    E
Sbjct: 486 KVYELMRACWQWNPSDRPSFAEIHQAFE 513

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A + D V +  ++  G   N +D D  T LHLAA EGH  IVE+LL+  A++N +D++ +
Sbjct: 12  AGQDDEVRI--LMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGK 69
Query: 83  TPLTDARLYGHRDICRILE 101
           T    +   G+ D+  IL+
Sbjct: 70  TAFDISIDNGNEDLAEILQ 88

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 241
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 241
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 17  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 75
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +ITE++  GNL   L +         V L + T +  
Sbjct: 76  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 196 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 252
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 253 KVYELMRACWQWNPSDRPSFAEI 275

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
           ++E++HPN++Q LG         +I E++  GNL   L        S  V L + T +  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
           ++E++HPN++Q LG         +I E++  GNL   L        S  V L + T +  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
           A++             ARN L  E   +K+ ++ +        Y      +   +     
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G   N  D    T LHLAA EGH  IVE+LL+Y A++N +D++ +T    +   G+
Sbjct: 99  LLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN 158
Query: 94  RDICR 98
            D+ +
Sbjct: 159 EDLAK 163

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
           G FGE     W+  + +   +K+     +++    K+   ++E++HPN++Q LG      
Sbjct: 22  GQFGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
              +ITE++  GNL   L        S  V L + T +  A++             ARN 
Sbjct: 81  PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 243 LQDEGDHLKIGEYWVQMFY----EQIHPNQENS-QRNDNSSIASNVLDDTKKDICSFGYI 297
           L  E   +K+ ++ +           H   +   +     S+A N     K D+ +FG +
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
            ++ +    +      D   +  +  E  +++ R   CP ++ +L+  C   +PS RP+F
Sbjct: 200 LWE-IATYGMSPYPGIDPSQVYEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
Query: 355 AAV 357
           A +
Sbjct: 258 AEI 260

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
           D +  N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    
Sbjct: 4   DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
           K+   ++E++HPN++Q LG         +I E++  GNL   L +         V L + 
Sbjct: 63  KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
           T +  A++             ARN L  E   +K+ ++ +        Y      +   +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
                S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R 
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
             CP ++ +L+  C   +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G   N  D    T LHLAA   H  IVE+LL++ A++N  D    TPL  A L+GH
Sbjct: 33  LMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGH 92
Query: 94  RDICRILEVNGG 105
            +I  +L  +G 
Sbjct: 93  LEIVEVLLKHGA 104

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 48/279 (17%)
Query: 125 VNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-- 182
           +  D +EL      ++  G FG+   A W G    +  +K+  + P + +    +N +  
Sbjct: 2   LEIDFAELTL--EEIIGIGGFGKVYRAFWIGD---EVAVKAARHDPDEDISQTIENVRQE 56
Query: 183 ---LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA 239
                 L+HPNI+   G  +    + L+ E+   G L  +LS K R+     + +A+ IA
Sbjct: 57  AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIA 115
Query: 240 R--NLLQDE-----------------------GDH----LKIGEYWVQMFYEQIHPNQEN 270
           R  N L DE                       GD     LKI ++       + H   + 
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF---GLAREWHRTTKM 172
Query: 271 SQRNDNSSIASNVLDDTK----KDICSFGYIFYQMLEGK-HLQTNNSFDFMHLKSVNFEP 325
           S     + +A  V+  +      D+ S+G + +++L G+   +  +     +  ++N   
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
               S CP    +L+  C N DP  RP+F  ++  L  +
Sbjct: 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN 180
           D  ++NF +++LN  HS        GE    +W+G  +V  V+K   +   K     ++ 
Sbjct: 8   DFKQLNF-LTKLNENHS--------GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEEC 58
Query: 181 CKLRELRHPNILQFLGSI--VLGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYAL 236
            +LR   HPN+L  LG+          LIT + P G+L  +L +     +D   A+++AL
Sbjct: 59  PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 237 DIA--------------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
           D A                    R++  DE    +I    V+  +      Q   +    
Sbjct: 119 DXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSF------QSPGRXYAP 172
Query: 277 SSIASNVL----DDTKK---DICSFGYIFYQML--EGKHLQTNNSFDFMHLKSVNFEPKF 327
           + +A   L    +DT +   D  SF  + ++++  E      +N      +      P  
Sbjct: 173 AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI 232
Query: 328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
                P+ + +L   C N+DP+KRP F  ++  LE+
Sbjct: 233 PPGISPH-VSKLXKICXNEDPAKRPKFDXIVPILEK 267

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK-----------VRLDLPTALR 233
           +  HPNI++  G +  G   +++TEY+  G+L   L              +   +   +R
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 234 YALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD 285
           Y  D+        ARN+L D     K+ ++ +    E   P+   +       I     +
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAXTTTGGKIPIRWTAPE 224
Query: 286 -------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNR 335
                   +  D+ SFG + +++L        N  +   + SV  E  +++     CP+ 
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--EEGYRLPAPMGCPHA 282
Query: 336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           L QL+  C +KD ++RP F+ ++  L+ +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
           G +GE     W+  + +   +K+     +++    K+   ++E++HPN++Q LG      
Sbjct: 22  GQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
              +ITE++  GNL   L        S  V L + T +  A++             ARN 
Sbjct: 81  PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 243 LQDEGDHLKIGEYWVQMFYE----QIHPNQENS-QRNDNSSIASNVLDDTKKDICSFGYI 297
           L  E   +K+ ++ +           H   +   +     S+A N     K D+ +FG +
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
            ++ +    +      D   +  +  E  +++ R   CP ++ +L+  C   +PS RP+F
Sbjct: 200 LWE-IATYGMSPYPGIDPSQVYEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
Query: 355 AAV 357
           A +
Sbjct: 258 AEI 260

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK-----------VRLDLPTALR 233
           +  HPNI++  G +  G   +++TEY+  G+L   L              +   +   +R
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 234 YALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD 285
           Y  D+        ARN+L D     K+ ++ +    E   P+   +       I     +
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGGKIPIRWTAPE 224
Query: 286 -------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNR 335
                   +  D+ SFG + +++L        N  +   + SV  E  +++     CP+ 
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--EEGYRLPAPMGCPHA 282
Query: 336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           L QL+  C +KD ++RP F+ ++  L+ +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 183 LRELRHPNILQFLGSIVL--GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           LR L H NI+++ G      G  + LI E+LP G+LK  L K K +++L   L+YA+ I 
Sbjct: 65  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--- 278
                            ARN+L +    +KIG++ +    + I  ++E     D+     
Sbjct: 125 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT---KAIETDKEXXTVKDDRDSPV 181
Query: 279 --IASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQISR 331
              A   L  +K     D+ SFG   +++L   +  +++S   + LK +     +  ++R
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELL--TYCDSDSSPMALFLKMIGPTHGQMTVTR 239
Query: 332 ----------------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
                           CP+ + QL+ +C    PS R +F  +I   E
Sbjct: 240 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 286

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 183 LRELRHPNILQFLGSIVL--GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           LR L H NI+++ G      G  + LI E+LP G+LK  L K K +++L   L+YA+ I 
Sbjct: 77  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--- 278
                            ARN+L +    +KIG++ +    + I  ++E     D+     
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT---KAIETDKEXXTVKDDRDSPV 193
Query: 279 --IASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQISR 331
              A   L  +K     D+ SFG   +++L   +  +++S   + LK +     +  ++R
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELL--TYCDSDSSPMALFLKMIGPTHGQMTVTR 251
Query: 332 ----------------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
                           CP+ + QL+ +C    PS R +F  +I   E
Sbjct: 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           N+D  E+     +M  +   G +GE     W+  + +   +K+     +++    K+   
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
           ++E++HPN++Q LG         +I E++  GNL   L +         V L + T +  
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMFY----EQIHPNQENS-QRNDNS 277
           A++             ARN L  E   +K+ ++ +           H   +   +     
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 183
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
           S+A N     K D+ +FG + ++ +    +      D   +  +  E  +++ R   CP 
Sbjct: 184 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 240
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
           ++ +L+  C   +PS RP+FA +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEI 263

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A+  +RV + Q+L + G   + +D      LH A S GH  + ELLL++ A +N  D
Sbjct: 62  LHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD 121
Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG 105
            WQ TPL +A      ++C +L  +G 
Sbjct: 122 LWQFTPLHEAASKNRVEVCSLLLSHGA 148

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
           G FGE     W GTW   T +      P  M   +  ++   +++L+H  ++Q L ++V 
Sbjct: 20  GQFGEV----WMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ-LYAVVS 74
Query: 201 GEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDIAR------------------ 240
            E + ++TEY+ KG+L   L   +   L LP  +  A  +A                   
Sbjct: 75  EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDICS 293
           N+L   G   KI ++ +    E    N+  +++     I     +         K D+ S
Sbjct: 135 NILVGNGLICKIADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 294 FGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTNKDPSKRP 352
           FG +  +++    +      +   L+ V    +    + CP  L +L+  C  KDP +RP
Sbjct: 192 FGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERP 251
Query: 353 TFAAVIITLEE 363
           TF  +   LE+
Sbjct: 252 TFEYLQSFLED 262

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +DS++ +++I +        +  G FG     KW G   VK +   ++  P    L A  
Sbjct: 25  RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 80
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
           N    LR+ RH NIL F+G      ++ ++T++    +L     I+  K  +    D+  
Sbjct: 81  NEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
                +D             + N+   E   +KIG++ +     +   + +  Q + +  
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
            +A  V+    K       D+ +FG + Y+++ G+  +   NN    + +    +  P  
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
              R  CP  +K+L+A+C  K   +RP F  ++ ++E ++  L
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +DS++ +++I +        +  G FG     KW G   VK +   ++  P    L A  
Sbjct: 24  RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 79
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
           N    LR+ RH NIL F+G      ++ ++T++    +L     I+  K  +    D+  
Sbjct: 80  NEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 138
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
                +D             + N+   E   +KIG++ +     +   + +  Q + +  
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
            +A  V+    K       D+ +FG + Y+++ G+  +   NN    + +    +  P  
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 258
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
              R  CP  +K+L+A+C  K   +RP F  ++ ++E ++  L
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 301

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
           G +GE     W+  + +   +K+     +++    K+   ++E++HPN++Q LG      
Sbjct: 22  GQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
              +I E++  GNL   L        S  V L + T +  A++             ARN 
Sbjct: 81  PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 243 LQDEGDHLKIGEYWVQMFY----EQIHPNQENS-QRNDNSSIASNVLDDTKKDICSFGYI 297
           L  E   +K+ ++ +           H   +   +     S+A N     K D+ +FG +
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
            ++ +    +      D   +  +  E  +++ R   CP ++ +L+  C   +PS RP+F
Sbjct: 200 LWE-IATYGMSPYPGIDPSQVYEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
Query: 355 AAV 357
           A +
Sbjct: 258 AEI 260

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 198 IVLGEEMILITEYLPKGNLK---GILSKKVRL----DLPTALRYALDI------------ 238
                ++ ++T++    +L     I+  K  +    D+       +D             
Sbjct: 73  ST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
           + N+   E   +KIG++ +     +   + +  Q + +   +A  V+    K       D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP  +K+L+A+C  
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 251
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
           K   +RP F  ++ ++E ++  L
Sbjct: 252 KKRDERPLFPQILASIELLARSL 274

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G   N +D    T LHLAA   H  IVE+LL+  A++N  D    TPL    +YGH
Sbjct: 33  LMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGH 92
Query: 94  RDICRILEVNGG 105
            +I  +L  +G 
Sbjct: 93  LEIVEVLLKHGA 104

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKV--------------RL 226
           L+++ HP++++  G+      ++LI EY   G+L+G L  S+KV               L
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 227 DLP------------------TALRYALDI--------ARNLLQDEGDHLKIGEYWVQM- 259
           D P                    ++Y  ++        ARN+L  EG  +KI ++ +   
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQM--LEGK---HLQTN 310
            YE+    + +  R     +A   L D    T+ D+ SFG + +++  L G     +   
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             F+ +        P      C   + +L+ QC  ++P KRP FA +   LE++
Sbjct: 260 RLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKV--------------RL 226
           L+++ HP++++  G+      ++LI EY   G+L+G L  S+KV               L
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 227 DLP------------------TALRYALDI--------ARNLLQDEGDHLKIGEYWVQM- 259
           D P                    ++Y  ++        ARN+L  EG  +KI ++ +   
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQM--LEGK---HLQTN 310
            YE+    + +  R     +A   L D    T+ D+ SFG + +++  L G     +   
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             F+ +        P      C   + +L+ QC  ++P KRP FA +   LE++
Sbjct: 260 RLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
                ++ ++T++    +L     I+  K  +    D+       +D             
Sbjct: 78  ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
           + N+   E   +KIG++ +     +   + +  Q + +   +A  V+    K       D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP  +K+L+A+C  
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 256
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
           K   +RP F  ++ ++E ++  L
Sbjct: 257 KKRDERPLFPQILASIELLARSL 279

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 44/198 (22%)
Query: 202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNL 242
           + + L+ EYLP G L+  L + + RLD    L Y+  I                  ARN+
Sbjct: 99  QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 158
Query: 243 LQDEGDHLKIGEYWVQM-------FYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
           L +   H+KI ++ +         +Y    P Q         S++ N+    + D+ SFG
Sbjct: 159 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFG 217
Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR----------------CPNRLKQL 339
            + Y++        + S +F+ +     +    +SR                CP  + +L
Sbjct: 218 VVLYELFTYCDKSCSPSAEFLRMMGCERDVP-ALSRLLELLEEGQRLPAPPACPAEVHEL 276
Query: 340 IAQCTNKDPSKRPTFAAV 357
           +  C    P  RP+F+A+
Sbjct: 277 MKLCWAPSPQDRPSFSAL 294

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 20  LSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A+  +R  +  ML EG  +P+ +D+ + TA+H AA++G+  ++ +LL YKA+ N++D
Sbjct: 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD 169
Query: 79  RWQRTPL 85
               TPL
Sbjct: 170 TEGNTPL 176

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 20  LSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A+  +R  +  ML EG  +P+ +D+ + TA+H AA++G+  ++ +LL YKA+ N++D
Sbjct: 111 LHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD 170
Query: 79  RWQRTPL 85
               TPL
Sbjct: 171 TEGNTPL 177

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
                ++ ++T++    +L     I+  K  +    D+       +D             
Sbjct: 78  ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
           + N+   E   +KIG++ +     +   + +  Q + +   +A  V+    K       D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP  +K+L+A+C  
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 256
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
           K   +RP F  ++ ++E ++  L
Sbjct: 257 KKRDERPLFPQILASIELLARSL 279

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
                ++ ++T++    +L     I+  K  +    D+       +D             
Sbjct: 73  ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
           + N+   E   +KIG++ +     +   + +  Q + +   +A  V+    K       D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP  +K+L+A+C  
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 251
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
           K   +RP F  ++ ++E ++  L
Sbjct: 252 KKRDERPLFPQILASIELLARSL 274

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 65  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
            L+ +C   DPS+RP F  +   L  +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKV--------------RL 226
           L+++ HP++++  G+      ++LI EY   G+L+G L  S+KV               L
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 227 DLP------------------TALRYALDI--------ARNLLQDEGDHLKIGEYWVQM- 259
           D P                    ++Y  ++        ARN+L  EG  +KI ++ +   
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQM--LEGK---HLQTN 310
            YE+    + +  R     +A   L D    T+ D+ SFG + +++  L G     +   
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             F+ +        P      C   + +L+ QC  ++P KRP FA +   LE++
Sbjct: 260 RLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 50  TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           TALH+AA++G+  +++LL+Q + ++N+KD    TPL  A  +G  + CRIL
Sbjct: 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 18  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
                ++ ++T++    +L     I+  K  +    D+       +D             
Sbjct: 75  ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 133
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
           + N+   E   +KIG++ +     +   + +  Q + +   +A  V+    K       D
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP  +K+L+A+C  
Sbjct: 194 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 253
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
           K   +RP F  ++ ++E ++  L
Sbjct: 254 KKRDERPLFPQILASIELLARSL 276

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +DS++ +++I +        +  G FG     KW G   VK +   ++  P    L A  
Sbjct: 25  RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 80
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
           N    LR+ RH NIL F+G      ++ ++T++    +L     I+  K  +    D+  
Sbjct: 81  NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
                +D             + N+   E   +KIG++ +     +   + +  Q + +  
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
            +A  V+    K       D+ +FG + Y+++ G+  +   NN    + +    +  P  
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
              R  CP  +K+L+A+C  K   +RP F  ++ ++E ++  L
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 44/198 (22%)
Query: 202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNL 242
           + + L+ EYLP G L+  L + + RLD    L Y+  I                  ARN+
Sbjct: 86  QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 145
Query: 243 LQDEGDHLKIGEYWV-------QMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
           L +   H+KI ++ +       + +Y    P Q         S++ N+    + D+ SFG
Sbjct: 146 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFG 204
Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR----------------CPNRLKQL 339
            + Y++        + S +F+ +     +    +SR                CP  + +L
Sbjct: 205 VVLYELFTYCDKSCSPSAEFLRMMGSERDVP-ALSRLLELLEEGQRLPAPPACPAEVHEL 263
Query: 340 IAQCTNKDPSKRPTFAAV 357
           +  C    P  RP+F+A+
Sbjct: 264 MKLCWAPSPQDRPSFSAL 281

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
           L+++ + D +   ++L + +     D D RTALH A S GH  IVE LLQ    +N KD 
Sbjct: 13  LAYSGKLDELK-ERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71
Query: 80  WQRTPLTDARLYGHRDICRILEVNGG 105
              +PL  A   G  +I + L V G 
Sbjct: 72  AGWSPLHIAASAGRDEIVKALLVKGA 97

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +DS++ +++I +        +  G FG     KW G   VK +   ++  P    L A  
Sbjct: 17  RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 72
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
           N    LR+ RH NIL F+G      ++ ++T++    +L     I+  K  +    D+  
Sbjct: 73  NEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 131
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
                +D             + N+   E   +KIG++ +     +   + +  Q + +  
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
            +A  V+    K       D+ +FG + Y+++ G+  +   NN    + +    +  P  
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 251
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
              R  CP  +K+L+A+C  K   +RP F  ++ ++E ++  L
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 294

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
           L+++ + D +   ++L + +     D D RTALH A S GH  IVE LLQ    +N KD 
Sbjct: 13  LAYSGKLDELK-ERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71
Query: 80  WQRTPLTDARLYGHRDICRILEVNGG 105
              +PL  A   G  +I + L V G 
Sbjct: 72  AGWSPLHIAASAGXDEIVKALLVKGA 97

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 70  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 247
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
            L+ +C   DPS+RP F    A +   LEE  A
Sbjct: 248 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 93  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 270
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
            L+ +C   DPS+RP F    A +   LEE  A
Sbjct: 271 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 303

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 42/197 (21%)
Query: 202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNL 242
           + + L+ EYLP G L+  L + + RLD    L Y+  I                  ARN+
Sbjct: 87  QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 146
Query: 243 LQDEGDHLKIGEYWV-------QMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
           L +   H+KI ++ +       + +Y    P Q         S++ N+    + D+ SFG
Sbjct: 147 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFG 205
Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFE-PKF--------------QISRCPNRLKQLI 340
            + Y++        + S +F+ +     + P                    CP  + +L+
Sbjct: 206 VVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELM 265
Query: 341 AQCTNKDPSKRPTFAAV 357
             C    P  RP+F+A+
Sbjct: 266 KLCWAPSPQDRPSFSAL 282

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 68  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 245
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
            L+ +C   DPS+RP F    A +   LEE  A
Sbjct: 246 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 278

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 35/68 (51%)
Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N  DY   T LHLAA  GH  IVE+LL+  A++N      RTPL  A    H +I 
Sbjct: 37  GADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIV 96
Query: 98  RILEVNGG 105
            +L  +G 
Sbjct: 97  EVLLKHGA 104

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 67  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 244
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
            L+ +C   DPS+RP F    A +   LEE  A
Sbjct: 245 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 277

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 62  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 239
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
            L+ +C   DPS+RP F    A +   LEE  A
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 83  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 65  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
            L+ +C   DPS+RP F  +   L  +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R+D           
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRDDLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 72  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 131
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 251
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 252 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 65  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
            L+ +C   DPS+RP F  +   L  +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 71  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 130
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 250
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 251 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
           +  G FG     KW G   VK +   ++  P    L A  N    LR+ RH NIL F+G 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
                ++ ++T++    +L     I+  K  +    D+       +D             
Sbjct: 73  ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
           + N+   E   +KIG++ +     +   + +  Q + +   +A  V+    K       D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
           + +FG + Y+++ G+  +   NN    + +    +  P     R  CP  +K+L+A+C  
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 251
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
           K   +RP F  ++ ++E ++  L
Sbjct: 252 KKRDERPLFPQILASIELLARSL 274

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 70  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 129
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 249
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 250 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 83  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 68  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 127
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 96  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 69  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 128
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 248
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 249 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 65  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 65  MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
            L+ +C   DPS+RP F  +   L  +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 63  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 122
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 242
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 243 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 65  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 30/234 (12%)
Query: 143 GVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV 199
           G FG     + R  G +    V+K  I   +K V    D    L  + HP I++  G+  
Sbjct: 17  GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------ARN 241
             +++ +I +Y+  G L  +L K  R   P A  YA ++                    N
Sbjct: 77  DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN 136
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQM 301
           +L D+  H+KI ++    +   +      +       + S    +   D  SFG + Y+M
Sbjct: 137 ILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196
Query: 302 LEG----KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
           L G        T  +++ +    + F P F        +K L+++   +D S+R
Sbjct: 197 LAGYTPFYDSNTMKTYEKILNAELRFPPFFN-----EDVKDLLSRLITRDLSQR 245

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 31  LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDAR 89
           L  +L      N++D +    LHLAA EGH  +VE L+++ A N+  ++    T    AR
Sbjct: 86  LQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 145
Query: 90  LYGHRDICRILEVNG 104
           LYG  ++  +++ NG
Sbjct: 146 LYGRNEVVSLMQANG 160

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 64  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 123
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 243
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 244 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 66  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 125
Query: 239 -----------------ARNLLQDEGDHLKIGEYWV-------QMFYEQIHPNQE----- 269
                             RN+L +  + +KIG++ +       + +Y+   P +      
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 270 --NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF 327
              S      S+AS        D+ SFG + Y++        +   +FM +   + + + 
Sbjct: 186 APESLTESKFSVAS--------DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 237
Query: 328 QI----------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            +                  CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 238 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L K K R+D    L+Y   I 
Sbjct: 65  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWV-------QMFYEQIHPNQE----- 269
                             RN+L +  + +KIG++ +       + F++   P +      
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 270 --NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF 327
              S      S+AS        D+ SFG + Y++        +   +FM +   + + + 
Sbjct: 185 APESLTESKFSVAS--------DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 328 QI----------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            +                  CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R+D           
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRDDLCGTLDYLPPE 202
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 259
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 260 -RDLISRLLKHNPSQRPMLREVL 281

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R D           
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R D           
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 181
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 239 -RDLISRLLKHNPSQRPMLREVL 260

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R D           
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R D           
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 177
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 234
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 235 -RDLISRLLKHNPSQRPMLREVL 256

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIA-- 239
           ++ L HP+I++ +G I+  E   +I E  P G L   L + K  L + T + Y+L I   
Sbjct: 79  MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                           RN+L    + +K+G++ +  + E     + +  R     ++   
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 197
Query: 284 LD----DTKKDICSFGYIFYQMLE-GKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
           ++     T  D+  F    +++L  GK       N      L+  +  PK  +  CP  L
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL--CPPVL 255
Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             L+ +C + DPS RP F  ++ +L +V
Sbjct: 256 YTLMTRCWDYDPSDRPRFTELVCSLSDV 283

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIA-- 239
           ++ L HP+I++ +G I+  E   +I E  P G L   L + K  L + T + Y+L I   
Sbjct: 67  MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                           RN+L    + +K+G++ +  + E     + +  R     ++   
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 185
Query: 284 LD----DTKKDICSFGYIFYQMLE-GKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
           ++     T  D+  F    +++L  GK       N      L+  +  PK  +  CP  L
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL--CPPVL 243
Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             L+ +C + DPS RP F  ++ +L +V
Sbjct: 244 YTLMTRCWDYDPSDRPRFTELVCSLSDV 271

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N++D +    LHLAA EGH  +VE L+++ A N+  ++    T    ARLYG  ++  ++
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
           + NG
Sbjct: 157 QANG 160

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N++D +    LHLAA EGH  +VE L+++ A N+  ++    T    ARLYG  ++  ++
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
           + NG
Sbjct: 157 QANG 160

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N++D +    LHLAA EGH  +VE L+++ A N+  ++    T    ARLYG  ++  ++
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
           + NG
Sbjct: 157 QANG 160

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N++D +    LHLAA EGH  +VE L+++ A N+  ++    T    ARLYG  ++  ++
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
           + NG
Sbjct: 157 QANG 160

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A + D V +  ++  G   N +D    T L+LA + GH  IVE+LL+  A++N  D    
Sbjct: 24  AGQDDEVRI--LMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGF 81
Query: 83  TPLTDARLYGHRDICRILEVNGG 105
           TPL  A   GH +I  +L  +G 
Sbjct: 82  TPLHLAAFIGHLEIAEVLLKHGA 104

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 445 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 622
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
            L+ +C   DPS+RP F  +   L  +
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTI 649

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 42/196 (21%)
Query: 203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNLL 243
           E+ L+ EYLP G L+  L + + RLD    L Y+  I                  ARN+L
Sbjct: 84  ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 244 QDEGDHLKIGEYWVQMFYEQ-------IHPNQENSQRNDNSSIASNVLDDTKKDICSFGY 296
            +   H+KI ++ +               P Q         S++ N+    + D+ SFG 
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFGV 202
Query: 297 IFYQMLEGKHLQTNNSFDFMHLKSVNFE-PKF--------------QISRCPNRLKQLIA 341
           + Y++        + S +F+ +     + P                    CP  + +L+ 
Sbjct: 203 VLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMK 262
Query: 342 QCTNKDPSKRPTFAAV 357
            C    P  RP+F+A+
Sbjct: 263 LCWAPSPQDRPSFSAL 278

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 19/125 (15%)
Query: 21  SFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRW 80
           +   R D + L  +L+ G +   ++ D+   LHLA  +GH  +V+ LL   A  N KD  
Sbjct: 94  ALHGRADLIPL--LLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS 151
Query: 81  QRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMV 140
             TPL  A   GH ++  +L         H   +   N K +            LH +++
Sbjct: 152 GNTPLIYACSGGHHELVALL-------LQHGASINASNNKGN----------TALHEAVI 194
Query: 141 EQGVF 145
           E+ VF
Sbjct: 195 EKHVF 199

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P+G +   L K  + D      Y  ++A      
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 181
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 239 -RDLISRLLKHNPSQRPMLREVL 260

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIA-- 239
           ++ L HP+I++ +G I+  E   +I E  P G L   L + K  L + T + Y+L I   
Sbjct: 63  MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                           RN+L    + +K+G++ +  + E     + +  R     ++   
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 181
Query: 284 LD----DTKKDICSFGYIFYQMLE-GKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
           ++     T  D+  F    +++L  GK       N      L+  +  PK  +  CP  L
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL--CPPVL 239
Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEV 364
             L+ +C + DPS RP F  ++ +L +V
Sbjct: 240 YTLMTRCWDYDPSDRPRFTELVCSLSDV 267

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 74/201 (36%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P+G +   L K  + D      Y  ++A      
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNS------SIA 280
                        NLL      LKI ++ W       +H           +       + 
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
              + D K D+ S G + Y+ L GK     N++   +  +  V F  P F         +
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----R 239
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
            LI++    +PS+RP    V+
Sbjct: 240 DLISRLLKHNPSQRPMLREVL 260

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 88  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 206
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 262
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           ++  G     +D +  T LHLAA  GH  +V+LLL+  A++N +D++ +T    +   G+
Sbjct: 25  LMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGN 84
Query: 94  RDICRILE 101
            D+  IL+
Sbjct: 85  EDLAEILQ 92

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 189
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 245
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
           +R+  HP+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +   
Sbjct: 445 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                          ARN+L    D +K+G++ +  + E     + +  +     +A   
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
           ++     +  D+  FG   +++L    K  Q   + D +  +  N E       CP  L 
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 622
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
            L+ +C   DPS+RP F  +   L  +
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTI 649

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 75/204 (36%), Gaps = 44/204 (21%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDN---------S 277
                        NLL      LKI ++ W       +H     S R D           
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHA---PSSRRDTLCGTLDYLPP 176
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPN 334
            +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F       
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA-- 234
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVI 358
             + LI++    +PS+RP    V+
Sbjct: 235 --RDLISRLLKHNPSQRPMLREVL 256

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 98  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 216
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 272
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI E+LP G+L+  L K K R+D    L+Y   I 
Sbjct: 68  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQIC 127
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R +           
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTELCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPN++   G +     +++ITE++  G+L   L +       ++L      +   
Sbjct: 62  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +  F E      + S     S++   +
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED-----DTSDPTYTSALGGKI 176
Query: 284 LD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQI 329
                           +  D+ S+G + ++++          +D  +   +N  E  +++
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---YGERPYWDMTNQDVINAIEQDYRL 233
Query: 330 S---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                CP+ L QL+  C  KD + RP F  ++ TL+++
Sbjct: 234 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TEY+  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPN++   G +     +++ITE++  G+L   L +       ++L      +   
Sbjct: 88  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +  F E      + S     S++   +
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-----DTSDPTYTSALGGKI 202
Query: 284 LD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQI 329
                           +  D+ S+G + ++++          +D  +   +N  E  +++
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---YGERPYWDMTNQDVINAIEQDYRL 259
Query: 330 S---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                CP+ L QL+  C  KD + RP F  ++ TL+++
Sbjct: 260 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 37/242 (15%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
           G FGE     W G +   T +      P  M + A  ++   ++ L+H  +++    +  
Sbjct: 24  GQFGEV----WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 201 GEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------ 240
            E + +ITEY+ KG+L   L   +  ++ LP  + ++  IA                   
Sbjct: 80  EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 139
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGY 296
           N+L  E    KI ++ +    E          +      A   ++      K D+ SFG 
Sbjct: 140 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGI 199
Query: 297 IFYQMLEGKHL----QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP 352
           + Y+++    +    +TN   D M   S  +    ++  CP+ L  ++  C  +   +RP
Sbjct: 200 LLYEIVTYGKIPYPGRTNA--DVMTALSQGYRMP-RVENCPDELYDIMKMCWKEKAEERP 256
Query: 353 TF 354
           TF
Sbjct: 257 TF 258

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI+   G +   + +++ITEY+  G+L   L K       ++L      + + 
Sbjct: 63  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTA 181
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL-KSVNFEPKFQISRC 332
            +        +  D+ S+G + ++++   E  +   +N      + +     P      C
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMD---C 238
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           P  L QL+  C  K+ S RP F  ++  L+++
Sbjct: 239 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI+   G +   + +++ITEY+  G+L   L K       ++L      + + 
Sbjct: 84  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTA 202
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL-KSVNFEPKFQISRC 332
            +        +  D+ S+G + ++++   E  +   +N      + +     P      C
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMD---C 259
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           P  L QL+  C  K+ S RP F  ++  L+++
Sbjct: 260 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 64  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 123
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 175
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 232
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 233 -RDLISRLLKHNPSQRPMLREVL 254

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 128
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 180
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 237
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 238 -RDLISRLLKHNPSQRPMLREVL 259

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI+   G +   + +++ITEY+  G+L   L K       ++L      + + 
Sbjct: 69  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTA 187
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL-KSVNFEPKFQISRC 332
            +        +  D+ S+G + ++++   E  +   +N      + +     P      C
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMD---C 244
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           P  L QL+  C  K+ S RP F  ++  L+++
Sbjct: 245 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 62  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 173
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 230
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 231 -RDLISRLLKHNPSQRPMLREVL 252

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 29  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 89  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 147
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
            ARNLL    D +KIG++ +     Q   H   +  ++   +  A   L         D 
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
             FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P 
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 267
Query: 350 KRPTFAAV 357
            RPTF A+
Sbjct: 268 DRPTFVAL 275

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTXLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIH-PNQENSQRNDN-----SSIA 280
                        NLL      LKI ++ W       +H P+   +            + 
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
              + D K D+ S G + Y+ L GK     N++   +  +  V F  P F         +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----R 234
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
            LI++    +PS+RP    V+
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 61/227 (26%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIARN 241
           +  L HPNI++  G +     M++  E++P G+L   +L K   +     LR  LDIA  
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLD----------- 285
           +           EY        +H     PN      ++N+ + + V D           
Sbjct: 135 I-----------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV 183
Query: 286 ----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN- 322
                                   K D  SF  I Y +L G+     + + +  +K +N 
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFINM 241
Query: 323 -----FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                  P      CP RL+ +I  C + DP KRP F+ ++  L E+
Sbjct: 242 IREEGLRPTIP-EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 26/195 (13%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNSSIASNVLDD 286
                        NLL      LKI ++ W              +       +    + D
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLKQLIAQC 343
            K D+ S G + Y+ L GK     N++   +  +  V F  P F         + LI++ 
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLISRL 241
Query: 344 TNKDPSKRPTFAAVI 358
              +PS+RP    V+
Sbjct: 242 LKHNPSQRPMLREVL 256

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/225 (19%), Positives = 93/225 (41%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L     R+D    L+Y   I 
Sbjct: 68  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQIC 127
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
                             RN+L +  + +KIG++ +     Q     +  +  ++     
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
           A   L ++K     D+ SFG + Y++        +   +FM +   + + +  +      
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                       CP+ +  ++ +C N + ++RP+F  + + ++++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIH-PNQENSQRNDN-----SSIA 280
                        NLL      LKI ++ W       +H P+   +            + 
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 181
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
              + D K D+ S G + Y+ L GK     N++   +  +  V F  P F         +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----R 237
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
            LI++    +PS+RP    V+
Sbjct: 238 DLISRLLKHNPSQRPMLREVL 258

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 19  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 79  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
            ARNLL    D +KIG++ +     Q   H   +  ++   +  A   L         D 
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
             FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P 
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 257
Query: 350 KRPTFAAV 357
            RPTF A+
Sbjct: 258 DRPTFVAL 265

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 42/223 (18%)
Query: 183 LRELRHPNILQFLGSI--VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           LR L H +I+++ G         + L+ EY+P G+L+  L +   + L   L +A  I  
Sbjct: 87  LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 145
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
                           ARN+L D    +KIG++ +     + H      +  D+     A
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
              L + K     D+ SFG   Y++L       +    F+ L  +              E
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265
Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              ++ R   CP  +  L+  C   + S RPTF  +I  L+ V
Sbjct: 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308

>pdb|1DC2|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 20 Structures Length = 156

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 34  MLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
           +L  G  PN  D    T  +H AA EG    + +L +  A L+++D W R P+  A   G
Sbjct: 63  LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122
Query: 93  HRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISE 131
           HRD+ R L    G              + SN    D +E
Sbjct: 123 HRDVARYLRAAAG------------GTRGSNHARIDAAE 149

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 61/227 (26%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIARN 241
           +  L HPNI++  G +     M++  E++P G+L   +L K   +     LR  LDIA  
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLD----------- 285
           +           EY        +H     PN      ++N+ + + V D           
Sbjct: 135 I-----------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV 183
Query: 286 ----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN- 322
                                   K D  SF  I Y +L G+     + + +  +K +N 
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFINM 241
Query: 323 -----FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                  P      CP RL+ +I  C + DP KRP F+ ++  L E+
Sbjct: 242 IREEGLRPTIP-EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 35/248 (14%)
Query: 139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +V +G FG    AKWR   V    I+S       +V    +  +L  + HPNI++  G+ 
Sbjct: 16  VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIV----ELRQLSRVNHPNIVKLYGAC 71
Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPT---ALRYALDIARN-------------- 241
           +    + L+ EY   G+L  +L     L   T   A+ + L  ++               
Sbjct: 72  L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 242 --------LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICS 293
                   LL   G  LKI ++      +    N + S       +        K D+ S
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 294 FGYIFYQMLEGKHL---QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
           +G I ++++  +         +F  M        P   I   P  ++ L+ +C +KDPS+
Sbjct: 190 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-IKNLPKPIESLMTRCWSKDPSQ 248
Query: 351 RPTFAAVI 358
           RP+   ++
Sbjct: 249 RPSMEEIV 256

>pdb|1BI7|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex Length = 156

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 34  MLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
           +L  G  PN  D    T  +H AA EG    + +L +  A L+++D W R P+  A   G
Sbjct: 63  LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122
Query: 93  HRDICRILEVNGG 105
           HRD+ R L    G
Sbjct: 123 HRDVARYLRAAAG 135

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 181
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 239 -RDLISRLLKHNPSQRPMLREVL 260

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 61/227 (26%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIARN 241
           +  L HPNI++  G +     M++  E++P G+L   +L K   +     LR  LDIA  
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLD----------- 285
           +           EY        +H     PN      ++N+ + + V D           
Sbjct: 135 I-----------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV 183
Query: 286 ----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN- 322
                                   K D  SF  I Y +L G+     + + +  +K +N 
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFINM 241
Query: 323 -----FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                  P      CP RL+ +I  C + DP KRP F+ ++  L E+
Sbjct: 242 IREEGLRPTIP-EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 35/248 (14%)
Query: 139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +V +G FG    AKWR   V    I+S       +V    +  +L  + HPNI++  G+ 
Sbjct: 15  VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIV----ELRQLSRVNHPNIVKLYGAC 70
Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPT---ALRYALDIARN-------------- 241
           +    + L+ EY   G+L  +L     L   T   A+ + L  ++               
Sbjct: 71  L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 242 --------LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICS 293
                   LL   G  LKI ++      +    N + S       +        K D+ S
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 294 FGYIFYQMLEGKHL---QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
           +G I ++++  +         +F  M        P   I   P  ++ L+ +C +KDPS+
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-IKNLPKPIESLMTRCWSKDPSQ 247
Query: 351 RPTFAAVI 358
           RP+   ++
Sbjct: 248 RPSMEEIV 255

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRXXLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 20  LSFASRGDRVGL-NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A + +R+G+  ++L +G++ N +D+  +T L  +   G++ +   LL++ AN+N ++
Sbjct: 72  LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131
Query: 79  RWQRTPLTDARLYGHRDICRIL 100
               TPL  A  YG  +I + L
Sbjct: 132 LEGETPLIVASKYGRSEIVKKL 153

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G + ++Q+  + T L LAA EG     ++LL + AN ++ D   R P   A+   H
Sbjct: 67  LLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 126
Query: 94  RDICRILE 101
            DI R+L+
Sbjct: 127 HDIVRLLD 134

>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative Modeling And Nmr Data Length = 136

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 34  MLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
           +L  G  PN  D    T  +H AA EG    + +L +  A L++ D W R P+  A   G
Sbjct: 63  LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG 122
Query: 93  HRDICRILEVNGG 105
           HRDI R L    G
Sbjct: 123 HRDIARYLHAATG 135

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           + QG  G   TA    T     + + ++    K  L   +   +RE ++PNI+ +L S +
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYAL--------------DI-ARNL 242
           +G+E+ ++ EYL  G+L  ++++    +  +    R  L              DI + N+
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
           L      +K+ ++    F  QI P Q  S+R++           + +      K DI S 
Sbjct: 148 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
           G +  +M+EG+    N N    ++L + N  P+ Q    P +L    +  + +C + D  
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLDMDVE 259
Query: 350 KR 351
           KR
Sbjct: 260 KR 261

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 65  LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIH-PNQENSQRNDN-----SSIA 280
                        NLL      LKI ++ W       +H P+   +            + 
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
              + D K D+ S G + Y+ L GK     N++   +  +  V F  P F         +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA----R 234
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
            LI++    +PS+RP    V+
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 42/221 (19%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           LR L H +I+++ G     GE+ + L+ EY+P G+L+  L +   + L   L +A  I  
Sbjct: 65  LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICE 123
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
                           ARN+L D    +KIG++ +     + H      +  D+     A
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 281 SNVLDDTK----KDICSFGYIFYQML------EGKHLQ-------TNNSFDFMHLKSV-- 321
              L + K     D+ SFG   Y++L      +  H +       T      + L  +  
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLE 243
Query: 322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
             E   +  RCP  +  L+  C   + S RPTF  ++  L+
Sbjct: 244 RGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 202
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 259
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 260 -RDLISRLLKHNPSQRPMLREVL 281

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           LR L H +I+++ G     GE+ + L+ EY+P G+L+  L +   + L   L +A  I  
Sbjct: 70  LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 128
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
                           ARN+L D    +KIG++ +     + H      +  D+     A
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
              L + K     D+ SFG   Y++L       +    F+ L  +              E
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              ++ R   CP  +  L+  C   + S RPTF  +I  L+ V
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           LR L H +I+++ G     GE+ + L+ EY+P G+L+  L +   + L   L +A  I  
Sbjct: 70  LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 128
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
                           ARN+L D    +KIG++ +     + H      +  D+     A
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
              L + K     D+ SFG   Y++L       +    F+ L  +              E
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              ++ R   CP  +  L+  C   + S RPTF  +I  L+ V
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 42/221 (19%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           LR L H +I+++ G     GE+ + L+ EY+P G+L+  L +   + L   L +A  I  
Sbjct: 64  LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICE 122
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
                           ARN+L D    +KIG++ +     + H      +  D+     A
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 281 SNVLDDTK----KDICSFGYIFYQML------EGKHLQ-------TNNSFDFMHLKSV-- 321
              L + K     D+ SFG   Y++L      +  H +       T      + L  +  
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLE 242
Query: 322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
             E   +  RCP  +  L+  C   + S RPTF  ++  L+
Sbjct: 243 RGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRXXLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 29  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 89  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 147
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
            ARNLL    D +KIG++ +     Q   H   +  ++   +  A   L         D 
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
             FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P 
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 267
Query: 350 KRPTFAAV 357
            RPTF A+
Sbjct: 268 DRPTFVAL 275

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 82  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 193
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 250
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 251 -RDLISRLLKHNPSQRPMLREVL 272

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 19  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 79  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
            ARNLL    D +KIG++ +     Q   H   +  ++   +  A   L         D 
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
             FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P 
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 257
Query: 350 KRPTFAAV 357
            RPTF A+
Sbjct: 258 DRPTFVAL 265

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 36/249 (14%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 23  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 83  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 141
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTK-------KD 290
            ARNLL    D +KIG++ +     Q + +    Q +     A    +  K        D
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 200
Query: 291 ICSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP 348
              FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P
Sbjct: 201 TWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 260
Query: 349 SKRPTFAAV 357
             RPTF A+
Sbjct: 261 EDRPTFVAL 269

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI ++ W       +H    +S+R             
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRXXLCGTLDYLPPE 178
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 235
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 236 -RDLISRLLKHNPSQRPMLREVL 257

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 19  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 79  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
            ARNLL    D +KIG++ +     Q   H   +  ++   +  A   L         D 
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
             FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P 
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 257
Query: 350 KRPTFAAV 357
            RPTF A+
Sbjct: 258 DRPTFVAL 265

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI  + W       +H    +S+R             
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGW------SVH--APSSRRTTLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A + D V +  ++  G     +D +  T LHLAA  GH  +V+LLL+  A++  +D++ +
Sbjct: 34  AGQDDEVRI--LMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGK 91
Query: 83  TPLTDARLYGHRDICRILE 101
           T    +   G+ D+  IL+
Sbjct: 92  TAFDISIDNGNEDLAEILQ 110

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK-----------VRLDLPTA 231
           + +  H NI++  G I   + M++ITEY+  G L   L +K           +   +   
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  ++        ARN+L +     K+ ++ +    E   P    +       I    
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTA 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHLKSVNFEPKFQISR-- 331
            +        +  D+ SFG + ++++   E  + + +N      +K++N    F++    
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMKAIN--DGFRLPTPM 273
Query: 332 -CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            CP+ + QL+ QC  ++ ++RP FA ++  L+++
Sbjct: 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
           G FG  +  +W        +  VK +    +  P  M    ++   +  L H N+++  G
Sbjct: 23  GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
            +VL   M ++TE  P G+L   L K +    L T  RYA+ +                 
Sbjct: 83  -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 141
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
            ARNLL    D +KIG++ +     Q   H   +  ++   +  A   L         D 
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
             FG   ++M   G+      N    +H      E   +   CP  +  ++ QC    P 
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 261
Query: 350 KRPTFAAV 357
            RPTF A+
Sbjct: 262 DRPTFVAL 269

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 87/236 (36%), Gaps = 66/236 (27%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS--KKVRLDLP--TALRYALDI 238
           L++L HPN++++  S +   E+ ++ E    G+L  ++   KK +  +P  T  +Y + +
Sbjct: 86  LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 239 AR------------------NLLQDEGDHLKIGEYWVQMFY------------------- 261
                               N+       +K+G+  +  F+                   
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 262 EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV 321
           E+IH N  N                 K DI S G + Y+M     LQ+    D M+L S+
Sbjct: 206 ERIHENGYN----------------FKSDIWSLGCLLYEMAA---LQSPFYGDKMNLYSL 246
Query: 322 NFE------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRS 371
             +      P          L+QL+  C N DP KRP    V    + + AC   S
Sbjct: 247 CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 52/220 (23%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD---------------LP 229
           +  HPNI++  G +     ++++TE++  G L   L    RL+               + 
Sbjct: 73  QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRGIA 128
Query: 230 TALRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIAS 281
           + +RY  ++        ARN+L +     K+ ++ +  F E+      +S   + SS+  
Sbjct: 129 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-----NSSDPTETSSLGG 183
Query: 282 NVLD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKF 327
            +                +  D  S+G + ++++          +D  +   +N  E  +
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM---SFGERPYWDMSNQDVINAIEQDY 240
Query: 328 QIS---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           ++     CP  L QL+  C  KD + RP F  V+  L+++
Sbjct: 241 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 4   DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
           D++  G+FD+                 + +++ E   P++ + +  TALH A   GH  I
Sbjct: 43  DSSLEGEFDL-----------------VQRIIYEVDDPSLPNDEGITALHNAVCAGHTEI 85
Query: 64  VELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
           V+ L+Q+  N+N  D    TPL  A    +  +C+ L  +G   F
Sbjct: 86  VKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
           LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A      
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
                        NLL      LKI  + W       +H    +S+R             
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGW------SVH--APSSRRTTLCGTLDYLPPE 178
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
           +    + D K D+ S G + Y+ L GK     N++   +  +  V F  P F        
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 235
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
            + LI++    +PS+RP    V+
Sbjct: 236 -RDLISRLLKHNPSQRPMLREVL 257

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 4   DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
           D++  G+FD+                 + +++ E   P++ + +  TALH A   GH  I
Sbjct: 43  DSSLEGEFDL-----------------VQRIIYEVDDPSLPNDEGITALHNAVCAGHTEI 85
Query: 64  VELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
           V+ L+Q+  N+N  D    TPL  A    +  +C+ L  +G   F
Sbjct: 86  VKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           + QG  G   TA    T     + + ++    K  L   +   +RE ++PNI+ +L S +
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYALD----------IARNLLQDE- 246
           +G+E+ ++ EYL  G+L  ++++    +  +    R  L           I RN+  D  
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNI 148
Query: 247 ----GDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
                  +K+ ++    F  QI P Q  S+R+            + +      K DI S 
Sbjct: 149 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
           G +  +M+EG+    N N    ++L + N  P+ Q    P +L    +  + +C   D  
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLEMDVE 260
Query: 350 KRPTFAAVI 358
           KR +   +I
Sbjct: 261 KRGSAKELI 269

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 38/242 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           + QG  G   TA    T     + + ++    K  L   +   +RE ++PNI+ +L S +
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYAL--------------DI-ARNL 242
           +G+E+ ++ EYL  G+L  ++++    +  +    R  L              DI + N+
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
           L      +K+ ++    F  QI P Q  S+R+            + +      K DI S 
Sbjct: 148 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
           G +  +M+EG+    N N    ++L + N  P+ Q    P +L    +  + +C + D  
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLDMDVE 259
Query: 350 KR 351
           KR
Sbjct: 260 KR 261

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
           +G FG+   A+  G  + K   K  +   VKM+   KD+   ++L              +
Sbjct: 45  EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
           H NI+  LG+      + +I EY  KGNL+  L    R   P  + Y+ DI         
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE 269
                                        ARN+L  E + +KI ++ +      I   ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 270 NSQ-RNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
            +  R     +A   L D     + D+ SFG + +++  L G     +     F  +   
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
               +P    + C N L  ++  C +  PS+RPTF  ++  L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TE +  G+L   L K       ++L      + + 
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 189
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 245
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G + ++Q+  + T L LAA EG     ++LL + AN ++ D   R P   A+   H
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235
Query: 94  RDICRILEV 102
            DI R+L++
Sbjct: 236 HDIVRLLDL 244

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +L+ G + ++Q+  + T L LAA EG     ++LL + AN ++ D   R P   A+   H
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235
Query: 94  RDICRILEV 102
            DI R+L++
Sbjct: 236 HDIVRLLDL 244

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TE +  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYG 92
           +++ G   + +D +  T LHLAA +GH  +V+ LL   + ++N +D    TP+  A  Y 
Sbjct: 63  LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122
Query: 93  HRDICRILEVNGGKDFIHD 111
           H D+ ++L   G    I D
Sbjct: 123 HVDLVKLLLSKGSDINIRD 141

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
           + +  HPNI++  G +   + ++++TE +  G+L   L K       ++L      + + 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
           ++Y  D+        ARN+L +     K+ ++ +    E   P    + R     I    
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
            +        +  D+ S+G + ++++   E  + + +N  D +    +     P      
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP  L QL+  C  KD + RP F  ++  L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	464
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-26
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-26
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-26
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-26
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-25
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-25
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-24
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-24
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-24
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-24
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-23
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-23
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-23
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-22
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-19
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-18
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-18
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-15
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-18
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-14
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-14
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-13
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-11
3hra_A	201	Ankyrin repeat family protein; structural protein;	9e-06
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-18
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-16
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-15
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-11
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-11
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-15
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-14
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-17
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-16
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-15
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	7e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-07
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-15
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-15
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-08
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-17
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-16
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-15
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-10
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-17
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-15
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	9e-12
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-10
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-17
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	9e-15
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-12
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-17
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-16
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-14
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-14
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-12
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-09
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-17
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-15
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-13
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-11
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-09
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-06
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-16
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-13
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-09
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-17
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-17
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-16
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-16
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-16
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-16
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-15
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-15
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-15
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-15
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-15
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-08
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-16
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-14
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-16
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-15
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-15
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-14
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-13
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-16
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-14
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-14
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-11
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	9e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-15
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-13
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-16
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-14
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	8e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-16
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-13
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-13
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-13
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-16
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-16
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-15
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-14
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-14
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-11
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-04
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-16
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-16
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-14
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-16
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-14
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-14
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-12
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-05
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-16
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-14
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-14
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-11
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-16
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-11
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-07
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-06
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-16
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-15
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-13
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-06
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-15
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-14
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-14
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-13
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-12
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-15
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-14
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-14
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-11
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-09
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-09
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-08
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-15
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-15
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-14
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-14
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-13
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-15
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-14
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-13
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	7e-13
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-12
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-12
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	7e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-15
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-14
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-13
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-13
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-13
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-10
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-10
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-15
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-14
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-13
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-13
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-13
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-13
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-07
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-15
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-13
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-11
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-09
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-15
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-15
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-14
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-13
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-05
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-15
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-14
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-15
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-15
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-14
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-15
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-14
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-13
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-11
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	7e-10
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-09
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-15
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-15
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-14
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-13
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-12
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-11
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-11
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-13
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-12
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-05
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-14
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-11
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-10
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-10
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-10
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-14
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-14
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-13
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-12
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-11
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-10
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-13
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-04
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-13
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-13
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-11
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-05
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-10
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-12
2rfa_A	232	Transient receptor potential cation channel subfa	9e-12
2rfa_A	232	Transient receptor potential cation channel subfa	1e-11
2rfa_A	232	Transient receptor potential cation channel subfa	2e-10
2rfa_A	232	Transient receptor potential cation channel subfa	4e-10
2rfa_A	232	Transient receptor potential cation channel subfa	3e-09
2rfa_A	232	Transient receptor potential cation channel subfa	4e-08
2pnn_A	273	Transient receptor potential cation channel subfa	1e-11
2pnn_A	273	Transient receptor potential cation channel subfa	1e-10
2pnn_A	273	Transient receptor potential cation channel subfa	8e-09
2pnn_A	273	Transient receptor potential cation channel subfa	2e-07
2pnn_A	273	Transient receptor potential cation channel subfa	1e-05
2pnn_A	273	Transient receptor potential cation channel subfa	3e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	8e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	9e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	9e-11
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-10
2etb_A	256	Transient receptor potential cation channel subfam	2e-10
2etb_A	256	Transient receptor potential cation channel subfam	2e-10
2etb_A	256	Transient receptor potential cation channel subfam	9e-07
2etb_A	256	Transient receptor potential cation channel subfam	2e-05
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	9e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-09
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-09
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-08
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-09
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-09
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-08
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-09
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-08
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	9e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-07
3uo9_A	534	Glutaminase kidney isoform, mitochondrial; hydrola	2e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-06
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	9e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-04

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  107 bits (270), Expect = 2e-26
 Identities = 42/272 (15%), Positives = 98/272 (36%), Gaps = 40/272 (14%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
           +G FG+    +W G   ++ +I     +  ++    ++    R+ RH N++ F+G+ +  
Sbjct: 43  KGRFGQVYHGRWHGEVAIR-LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101

Query: 202 EEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR------------------NL 242
             + +IT       L  ++   K+ LD+    + A +I +                  N+
Sbjct: 102 PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV 161

Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQ----------------RNDNSSIASNVLDD 286
             D G  + I ++ +      +   +   +                R  +     + L  
Sbjct: 162 FYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPF 220

Query: 287 TKK-DICSFGYIFYQMLEGKH-LQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT 344
           +K  D+ + G I+Y++   +   +T  +   +       +P          +  ++  C 
Sbjct: 221 SKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCW 280

Query: 345 NKDPSKRPTFAAVIITLEEVSACLGRSALCPT 376
             +  +RPTF  ++  LE++     R    P 
Sbjct: 281 AFEQEERPTFTKLMDMLEKLPK-RNRRLSHPG 311

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  106 bits (267), Expect = 4e-26
 Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 49/291 (16%)

Query: 112 QPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHP 170
           + L  +   D ++++    +LN      +  G FG    A+W G+ V VK ++    +H 
Sbjct: 19  ENLYFQGAMDGDDMDIPWCDLNIKE--KIGAGSFGTVHRAEWHGSDVAVK-ILMEQDFHA 75

Query: 171 VKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK---KVRLD 227
            ++    ++   ++ LRHPNI+ F+G++     + ++TEYL +G+L  +L K   + +LD
Sbjct: 76  ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLD 135

Query: 228 LPTALRYALDIAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHPN 267
               L  A D+A+                    NLL D+   +K+ ++ +     ++  +
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS----RLKAS 191

Query: 268 QENSQRNDNSSI---ASNVLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKS 320
              S ++   +    A  VL     + K D+ SFG I +++   +       +  ++   
Sbjct: 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP-----WGNLNPAQ 246

Query: 321 VNFEPKFQISR------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS 365
           V     F+  R         ++  +I  C   +P KRP+FA ++  L  + 
Sbjct: 247 VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  105 bits (265), Expect = 5e-26
 Identities = 57/282 (20%), Positives = 106/282 (37%), Gaps = 68/282 (24%)

Query: 128 DISELNTLHSSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLREL 186
           D  +LN L    + +   GE    +W+G  + VK V+K   +   K     ++  +LR  
Sbjct: 8   DFKQLNFLT--KLNENHSGELWKGRWQGNDIVVK-VLKVRDWSTRKSRDFNEECPRLRIF 64

Query: 187 RHPNILQFLGSIV--LGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDIAR-- 240
            HPN+L  LG+          LIT ++P G+L  +L       +D   A+++ALD+AR  
Sbjct: 65  SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124

Query: 241 ------------------NLLQDEGDHLKIGEYWVQMF---YEQIHPNQ----------- 268
                             +++ DE    +I      M    +    P +           
Sbjct: 125 AFLHTLEPLIPRHALNSRSVMIDEDMTARIS-----MADVKFSFQSPGRMYAPAWVAPEA 179

Query: 269 -ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF 327
            +    + N             D+ SF  + ++++  +       F  +    +  +   
Sbjct: 180 LQKKPEDTNR---------RSADMWSFAVLLWELVTREVP-----FADLSNMEIGMKVAL 225

Query: 328 QISR------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           +  R          + +L+  C N+DP+KRP F  ++  LE+
Sbjct: 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  105 bits (265), Expect = 6e-26
 Identities = 56/274 (20%), Positives = 96/274 (35%), Gaps = 68/274 (24%)

Query: 142 QGVFGESQTAKW--RGTWV-VKTVIKSHIYHPVKMVLSAKDNCK----LRELRHPNILQF 194
           +G FG     +     + V +K++I        +M+   ++  +    +  L HPNI++ 
Sbjct: 29  KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL 88

Query: 195 LGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR------------- 240
            G +       ++ E++P G+L   L  K   +     LR  LDIA              
Sbjct: 89  YGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIV 146

Query: 241 -------NLLQDEGD-----HLKIGEYWVQMFYEQIHPNQENSQRNDNSS---------- 278
                  N+     D       K+ ++ +             SQ++ +S           
Sbjct: 147 HRDLRSPNIFLQSLDENAPVCAKVADFGL-------------SQQSVHSVSGLLGNFQWM 193

Query: 279 -----IASNVLDDTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFE---PKFQI 329
                 A       K D  SF  I Y +L G+      +      +  +  E   P    
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI-P 252

Query: 330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
             CP RL+ +I  C + DP KRP F+ ++  L E
Sbjct: 253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  103 bits (260), Expect = 2e-25
 Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 62/283 (21%)

Query: 128 DISELNTLHSSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCK-LRE 185
           D +EL      ++  G FG+   A W G  V VK           + + + +   K    
Sbjct: 5   DFAELTLEE--IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62

Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR----- 240
           L+HPNI+   G  +    + L+ E+   G L  +LS K R+     + +A+ IAR     
Sbjct: 63  LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYL 121

Query: 241 ----------------NLLQDEGDH--------LKIGEYWVQMFYEQIHPNQENSQRNDN 276
                           N+L  +           LKI ++ +             ++    
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL-------------AREWHR 168

Query: 277 SSIASN----------VLD----DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSV 321
           ++  S           V+         D+ S+G + +++L G+      +     +  ++
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228

Query: 322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           N       S CP    +L+  C N DP  RP+F  ++  L  +
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  103 bits (259), Expect = 6e-25
 Identities = 52/285 (18%), Positives = 96/285 (33%), Gaps = 79/285 (27%)

Query: 128 DISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK----- 182
           D  E+      +V +G FG    AKWR   V            +K + S  +        
Sbjct: 6   DYKEIEVEE--VVGRGAFGVVCKAKWRAKDVA-----------IKQIESESERKAFIVEL 52

Query: 183 --LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK---VRLDLPTALRYALD 237
             L  + HPNI++  G+ +    + L+ EY   G+L  +L             A+ + L 
Sbjct: 53  RQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110

Query: 238 IAR---------------------NLLQDEGD-HLKIGEYWVQMFYEQIHPNQENSQRND 275
            ++                     NLL   G   LKI ++                  + 
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT--------------ACDI 156

Query: 276 NSSIASN----------VLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV 321
            + + +N          V +      K D+ S+G I ++++  +            +   
Sbjct: 157 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 216

Query: 322 NFE---PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
                 P   I   P  ++ L+ +C +KDPS+RP+   ++  +  
Sbjct: 217 VHNGTRPPL-IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  102 bits (257), Expect = 1e-24
 Identities = 54/273 (19%), Positives = 104/273 (38%), Gaps = 52/273 (19%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK----LRELRHPNILQFLGS 197
           +G FG++     R T  V  ++   +    +     +   K    +R L HPN+L+F+G 
Sbjct: 20  KGCFGQAIKVTHRETGEV--MVMKELIRFDEETQ--RTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 198 IVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIA----------------- 239
           +   + +  ITEY+  G L+GI+ S   +      + +A DIA                 
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135

Query: 240 -RNLLQDEGDHLKIG-------EYWVQMFYEQIHPNQENSQRNDNSSIASN------VLD 285
             N L  E  ++ +            +   E +   ++  ++   + + +       +++
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN 195

Query: 286 ----DTKKDICSFGYIFYQMLEGK-----HLQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
               D K D+ SFG +  +++        +L     F    L    F  ++    CP   
Sbjct: 196 GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF---GLNVRGFLDRYCPPNCPPSF 252

Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG 369
             +  +C + DP KRP+F  +   LE +   L 
Sbjct: 253 FPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  102 bits (255), Expect = 2e-24
 Identities = 56/294 (19%), Positives = 95/294 (32%), Gaps = 84/294 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE--------LRHPNILQ 193
           +G +GE     W+G  V            VK+  S  +    RE        LRH NIL 
Sbjct: 18  KGRYGEVWRGSWQGENVA-----------VKIFSSRDEKSWFRETELYNTVMLRHENILG 66

Query: 194 FLGSIVLGE----EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------- 240
           F+ S +       ++ LIT Y   G+L   L     LD  + LR  L IA          
Sbjct: 67  FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-LDTVSCLRIVLSIASGLAHLHIEI 125

Query: 241 -----------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND-------- 275
                            N+L  +     I +  + + + Q     +              
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185

Query: 276 ----NSSIASNVLDDTKK-DICSFGYIFYQMLEGKH---------------LQTNNSFDF 315
               + +I  +  D  K+ DI +FG + +++                    +  + SF+ 
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245

Query: 316 MHLKSVN------FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           M               ++        L +L+ +C  ++PS R T   +  TL +
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  102 bits (256), Expect = 2e-24
 Identities = 52/296 (17%), Positives = 96/296 (32%), Gaps = 84/296 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE--------LRHPNILQ 193
           +G +GE    KWRG  V            VK+  + ++    RE        +RH NIL 
Sbjct: 47  KGRYGEVWMGKWRGEKVA-----------VKVFFTTEEASWFRETEIYQTVLMRHENILG 95

Query: 194 FLGS----IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------- 240
           F+ +         ++ LIT+Y   G+L   L     LD  + L+ A              
Sbjct: 96  FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEI 154

Query: 241 -----------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND-------- 275
                            N+L  +     I +  + + +       +              
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214

Query: 276 ----NSSIASNVLDDTKK-DICSFGYIFYQMLEG---------------KHLQTNNSFDF 315
               + S+  N        D+ SFG I +++                    + ++ S++ 
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYED 274

Query: 316 MHLKSVN------FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS 365
           M            F  ++    C  ++ +L+ +C   +P+ R T   V  TL ++S
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  100 bits (250), Expect = 8e-24
 Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 48/293 (16%)

Query: 110 HDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYH 169
           H      R+  D  E+     ++       +  G FG     KW G   VK ++      
Sbjct: 6   HHHHHGSRDAADDWEIPD--GQITVGQ--RIGSGSFGTVYKGKWHGDVAVK-MLNVTAPT 60

Query: 170 PVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDL 228
           P ++     +   LR+ RH NIL F+G      ++ ++T++    +L   L + + + ++
Sbjct: 61  PQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEM 119

Query: 229 PTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN 270
              +  A   AR                  N+   E + +KIG++ +     +   + + 
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179

Query: 271 SQ-------------RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMH 317
            Q             R  +S+  S      + D+ +FG + Y+++ G+   +N +     
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYS-----FQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234

Query: 318 LKSVNFE---PKFQISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS 365
           ++ V      P     R  CP R+K+L+A+C  K   +RP+F  ++  +EE++
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 99.1 bits (247), Expect = 4e-23
 Identities = 46/289 (15%), Positives = 99/289 (34%), Gaps = 70/289 (24%)

Query: 142 QGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS--- 197
           +G FGE    KWRG  V VK +  S      +      +  +   LRH NIL F+ +   
Sbjct: 52  KGRFGEVWRGKWRGEEVAVK-IFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNK 107

Query: 198 -IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR---------------- 240
                 ++ L+++Y   G+L   L++   + +   ++ AL  A                 
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166

Query: 241 ----------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND------------NSS 278
                     N+L  +     I +  + + ++      + +  +             + S
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226

Query: 279 IASNVLDDTKK-DICSFGYIFYQMLEGK---------------HLQTNNSFDFMHLKSVN 322
           I     +  K+ DI + G +F+++                    + ++ S + M      
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286

Query: 323 ------FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS 365
                    ++Q       + +++ +C   + + R T   +  TL ++S
Sbjct: 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 96.4 bits (240), Expect = 3e-22
 Identities = 58/322 (18%), Positives = 105/322 (32%), Gaps = 85/322 (26%)

Query: 119 EKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSA 177
           E  ++E + D+  L  L   ++ +G +G           V VK    ++     +  ++ 
Sbjct: 2   EAAASEPSLDLDNLKLLE--LIGRGRYGAVYKGSLDERPVAVKVFSFAN----RQNFINE 55

Query: 178 KDNCKLRELRHPNILQFLG-----SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTAL 232
           K+  ++  + H NI +F+      +     E +L+ EY P G+L   LS     D  ++ 
Sbjct: 56  KNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSC 114

Query: 233 RYALDIAR---------------------------NLLQDEGDHLKIGEYWVQMFYEQIH 265
           R A  + R                           N+L        I ++ + M      
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174

Query: 266 PNQENSQRNDNSSIASN-------VLDDT-----------KKDICSFGYIF--------- 298
             +   + N   S           VL+             + D+ + G I+         
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234

Query: 299 ---------YQMLEGKHLQTNNSFDFMHLKSVNFE---PKF-----QISRCPNRLKQLIA 341
                    YQM     +  + +F+ M    V+ E   PKF     + S     LK+ I 
Sbjct: 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQ-VLVSREKQRPKFPEAWKENSLAVRSLKETIE 293

Query: 342 QCTNKDPSKRPTFAAVIITLEE 363
            C ++D   R T       + E
Sbjct: 294 DCWDQDAEARLTAQXAEERMAE 315

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 48/326 (14%), Positives = 97/326 (29%), Gaps = 89/326 (27%)

Query: 117 RNEKDSNEVNFDISELN--TLHSSMVE---QGVFGESQTAKWRGTWVVKTVIKSHIYHPV 171
            +   S+ V+     L   ++   ++E   +G FG    A+    +V            V
Sbjct: 4   HHHHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVA-----------V 52

Query: 172 KMVLSAKDNCKLRE--------LRHPNILQFLGSIVLGE----EMILITEYLPKGNLKGI 219
           K+           E        ++H NILQF+G+   G     ++ LIT +  KG+L   
Sbjct: 53  KIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDF 112

Query: 220 LSKKVRLDLPTALRYALDIAR----------------------------NLLQDEGDHLK 251
           L   V +        A  +AR                            N+L        
Sbjct: 113 LKANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171

Query: 252 IGEYWVQMFYEQIHPNQENSQRND----------NSSIASNVLDDTKKDICSFGYIFYQM 301
           I ++ + + +E      +   +              +I        + D+ + G + +++
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231

Query: 302 LEGK----------------HLQTNNSFDFMHLKSVN------FEPKFQISRCPNRLKQL 339
                                +  + S + M    V+          +Q       L + 
Sbjct: 232 ASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCET 291

Query: 340 IAQCTNKDPSKRPTFAAVIITLEEVS 365
           I +C + D   R +   V   + ++ 
Sbjct: 292 IEECWDHDAEARLSAGCVGERITQMQ 317

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 81.3 bits (202), Expect = 1e-18
 Identities = 30/66 (45%), Positives = 41/66 (62%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G+ PNV+D+   T LH A + GH  +VELLLQ+KA +N       +PL DA   GH 
Sbjct: 30  LQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHV 89

Query: 95  DICRIL 100
           DI ++L
Sbjct: 90  DIVKLL 95

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 78.6 bits (195), Expect = 8e-18
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+     N   Y   + LH AA  GH  IV+LLL Y A+ N  + +   P+        +
Sbjct: 63  LQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMK 122

Query: 95  DICRILEVNG 104
            +  + E N 
Sbjct: 123 SLLLLPEKNE 132

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 70.1 bits (173), Expect = 8e-15
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           ++   T LH+A+ +G  P VE LLQ  ++ N+KD    TPL +A  +GH  +  +L
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELL 62

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 46.6 bits (112), Expect = 1e-06
 Identities = 6/39 (15%), Positives = 14/39 (35%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           L  G S N  +      +     E    ++ L  + +++
Sbjct: 96  LSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 81.3 bits (202), Expect = 5e-18
 Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 10/105 (9%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++ D   + ++L++     +  D +  T L++A       I + L+   A++NL++
Sbjct: 10  LEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN 69

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
               +P   A   G  +I   +  +   D          N+ +  
Sbjct: 70  SISDSPYLYAGAQGRTEILAYMLKHATPDL---------NKHNRY 105

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 70.2 bits (173), Expect = 3e-14
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 42  NVQDYDKRTALHLAA-----SEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
           + Q+    TAL  A      ++ +  IV+LL++  A+ ++KD   RT +  A   G+ +I
Sbjct: 134 DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEI 193

Query: 97  CRIL 100
            +IL
Sbjct: 194 SKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 69.0 bits (170), Expect = 8e-14
 Identities = 12/58 (20%), Positives = 21/58 (36%)

Query: 43  VQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           ++ Y+    L  A       + E+L      ++  D    TPL  A      +I + L
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKAL 58

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 67.9 bits (167), Expect = 2e-13
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 10/87 (11%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDI 96
           G   N+Q+    +    A ++G   I+  +L++   +LN  +R+    L  A   GH D 
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121

Query: 97  CRILEVNGGKDFIHDQPLTVRNEKDSN 123
            ++L  +G +D          + ++  
Sbjct: 122 VKLLLEDGREDI---------DFQNDF 139

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 61.7 bits (151), Expect = 3e-11
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLY-----GHRD 95
           N  +     AL  AA +GH   V+LLL+  + +++ ++ +  T L +A         ++D
Sbjct: 100 NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQD 159

Query: 96  ICRIL 100
           I ++L
Sbjct: 160 IVKLL 164

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 45.5 bits (109), Expect = 9e-06
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQY 70
           G   +++D   RTA+  A  +G+  I ++L QY
Sbjct: 168 GADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 80.2 bits (199), Expect = 7e-18
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           LS AS G    +  +L E     N+ D++  T L  A    H   VE LL   A+L  + 
Sbjct: 73  LSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEA 132

Query: 79  RWQRTPLTDARLYGHRDICRILEVNG 104
               TP+  A   G+R + +++E + 
Sbjct: 133 DSGYTPMDLAVALGYRKVQQVIENHI 158

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 74.8 bits (185), Expect = 5e-16
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L  G  P++   ++ +AL LA++ G+  IV LLL+   ++N+ D    TPL  A    H 
Sbjct: 56  LEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV 115

Query: 95  DICRIL 100
                L
Sbjct: 116 KCVEAL 121

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 73.2 bits (181), Expect = 1e-15
 Identities = 16/60 (26%), Positives = 29/60 (48%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
            N  D    T L  A++ G    V  LL++ A+ ++  + + + L+ A   G+ DI  +L
Sbjct: 29  VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 60.9 bits (149), Expect = 3e-11
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 49  RTALHLAASEGHAPIVELLLQYKANL-NLKDRWQRTPLTDARLYGHRDICRIL 100
             ++H  A++G    ++  L+   NL N  D    TPL  A  +G  +  R L
Sbjct: 3   SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFL 55

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 60.9 bits (149), Expect = 4e-11
 Identities = 8/50 (16%), Positives = 18/50 (36%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP 84
           L  G     +     T + LA + G+  + +++  +   L   +     P
Sbjct: 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 79.1 bits (196), Expect = 1e-17
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 20  LSFASRG--DRVGLNQMLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNL 76
           +     G      L  +L  G  PN  D    T  +H AA EG    + +L +  A L++
Sbjct: 49  IQVMMMGSARVAEL--LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV 106

Query: 77  KDRWQRTPLTDARLYGHRDICRIL 100
           +D W R P+  A   GHRD+ R L
Sbjct: 107 RDAWGRLPVDLAEELGHRDVARYL 130

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 72.1 bits (178), Expect = 2e-15
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L+ A+   RV   + L   G +PN  +   R  + +    G A + ELLL + A  N  D
Sbjct: 16  LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCAD 74

Query: 79  RWQRT-PLTDARLYGHRDICRIL 100
               T P+ DA   G  D   +L
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVL 97

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 69.8 bits (172), Expect = 2e-14
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 40  SPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRI 99
           +           L  AA+ G    V  LL+  AN N  + + R P+      G   +  +
Sbjct: 4   AAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAEL 62

Query: 100 L 100
           L
Sbjct: 63  L 63

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 67.1 bits (165), Expect = 1e-13
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 6/78 (7%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           +  A+R   +    +L R G   +V+D   R  + LA   GH  +   L           
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR--- 138

Query: 79  RWQRTPLTDARLYGHRDI 96
                        G  DI
Sbjct: 139 --GSNHARIDAAEGPSDI 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 78.2 bits (194), Expect = 2e-17
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L++G SPNVQD    + +H AA  G    +++L+++ A++N+ D     P+  A   GH 
Sbjct: 55  LKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT 114

Query: 95  DICRIL 100
            +   L
Sbjct: 115 AVVSFL 120

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 75.1 bits (186), Expect = 2e-16
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           +  G   NV D      +HLA  EGH  +V  L   +++L+ +D    TPL  A   G +
Sbjct: 88  VEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQ 146

Query: 95  DICRIL 100
           D+  IL
Sbjct: 147 DLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 72.4 bits (179), Expect = 2e-15
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           + RE   P+  +   +TAL +    G   I   LL+  A+ N++D    +P+ DA   G 
Sbjct: 22  LHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80

Query: 94  RDICRIL 100
            D  ++L
Sbjct: 81  LDTLKVL 87

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 56.7 bits (138), Expect = 7e-10
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 50  TALHLAASEGHAPIV-ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
             L  AA+ G    V  LL +   + +  +R+ +T L     +G   I   L
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALEL 54

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 48.2 bits (116), Expect = 5e-07
 Identities = 10/49 (20%), Positives = 19/49 (38%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL 68
           +  A +     +   L   +  + +D    T L LA   G   +V++L 
Sbjct: 105 IHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 77.5 bits (192), Expect = 2e-17
 Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 20  LSFASRG--DRVGLNQMLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNL 76
           +     G      L  +L  G  PN  D    T  +H AA EG    + +L +  A L++
Sbjct: 49  IQVMMMGSAQVAEL--LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV 106

Query: 77  KDRWQRTPLTDARLYGHRDICRILEVNG 104
            D W R P+  A   GHRDI R L    
Sbjct: 107 CDAWGRLPVDLAEEQGHRDIARYLHAAT 134

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 71.7 bits (177), Expect = 2e-15
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           ++        L  AA+ G    V  LL+  A+ N  +R+ R P+      G   +  +L
Sbjct: 6   HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVAELL 63

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 70.5 bits (174), Expect = 6e-15
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L+ A+   +V   + L   G  PN  +   R  + +    G A + ELLL + A  N  D
Sbjct: 16  LATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVAELLLLHGAEPNCAD 74

Query: 79  RWQRT-PLTDARLYGHRDICRIL 100
               T P+ DA   G  D   +L
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVL 97

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 52.4 bits (127), Expect = 1e-08
 Identities = 11/39 (28%), Positives = 15/39 (38%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
            R G   +V D   R  + LA  +GH  I   L     +
Sbjct: 98  HRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 78.6 bits (195), Expect = 2e-17
 Identities = 26/63 (41%), Positives = 33/63 (52%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   NV +    T LHLAAS GH  IV+ LLQYKA++N  +     PL  A  +G   + 
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121

Query: 98  RIL 100
             L
Sbjct: 122 EDL 124

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 74.8 bits (185), Expect = 6e-16
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+     N  +      LH A   G   + E L+   A +++ +++   P+  A+     
Sbjct: 92  LQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE 151

Query: 95  DICRILEVNG 104
            +    E  G
Sbjct: 152 LLRERAEKMG 161

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 72.1 bits (178), Expect = 5e-15
 Identities = 23/63 (36%), Positives = 33/63 (52%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
               N  D    + LH A  EG + +VE+L+   A +N+ +R   TPL  A  +GHRDI 
Sbjct: 29  ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIV 88

Query: 98  RIL 100
           + L
Sbjct: 89  QKL 91

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 59.8 bits (146), Expect = 9e-11
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKAN-LNLKDRWQRTPLTDARLYGHRDICRIL 100
             +    +     EG+A  V L L    N LN  D    +PL  A   G   +  +L
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEML 58

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 57.8 bits (141), Expect = 4e-10
 Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 6/59 (10%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +  G   ++ +      +  A +     + E   +   NLN      R P  D    G 
Sbjct: 125 VANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN------RIPYKDTFWKGT 177

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 78.7 bits (195), Expect = 2e-17
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD- 78
              A+R         L E    +  D + RTAL   A  G    V LL +  A+L+ +D 
Sbjct: 48  WWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM 107

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           R   T L  A  Y   ++   L
Sbjct: 108 RGGLTALHMAAGYVRPEVVEAL 129

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 73.3 bits (181), Expect = 2e-15
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L F +        ++L E G   + +D     TALH+AA      +VE L++  A++ ++
Sbjct: 80  LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVE 139

Query: 78  DRWQRTPLTDARLYGHRDICRIL 100
           D    T L  AR           
Sbjct: 140 DERGLTALELAREILKTTPKGNP 162

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 62.5 bits (153), Expect = 9e-12
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +  T    AA +     +  LL+   +++  D   RT L      G     R+L
Sbjct: 43  EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLL 95

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 57.9 bits (141), Expect = 4e-10
 Identities = 8/59 (13%), Positives = 16/59 (27%), Gaps = 3/59 (5%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +    +      +   +GH+P         A++  +     TP   A           L
Sbjct: 8   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQL 63

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 10/44 (22%), Positives = 16/44 (36%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           +  G    V+D    TAL LA            +Q+   + L+ 
Sbjct: 130 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK 173

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 76.7 bits (190), Expect = 3e-17
 Identities = 22/63 (34%), Positives = 28/63 (44%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N      R  LH AA  G   I+E LL   A++N  D+   TPL  A   GH    
Sbjct: 30  GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 89

Query: 98  RIL 100
           ++L
Sbjct: 90  KLL 92

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 69.7 bits (172), Expect = 9e-15
 Identities = 17/62 (27%), Positives = 23/62 (37%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L +G   N  D    T L  A  EGH   V+LLL   A+  +K     T          +
Sbjct: 60  LLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIK 119

Query: 95  DI 96
            +
Sbjct: 120 AL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 63.6 bits (156), Expect = 1e-12
 Identities = 11/54 (20%), Positives = 16/54 (29%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                   A   G    V+  +    ++N      R PL  A   G  +I   L
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFL 59

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 38.5 bits (91), Expect = 6e-04
 Identities = 6/31 (19%), Positives = 13/31 (41%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVE 65
           L +G    V+  D  TA     ++    +++
Sbjct: 93  LSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 80.2 bits (199), Expect = 3e-17
 Identities = 22/68 (32%), Positives = 36/68 (52%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G + ++Q+  + T L LAA EG     ++LL + AN ++ D   R P   A+   H DI 
Sbjct: 180 GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239

Query: 98  RILEVNGG 105
           R+L++   
Sbjct: 240 RLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 76.0 bits (188), Expect = 7e-16
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
            N  D    TALHLAA    +   + LL+  A+ N++D   RTPL  A     + + +IL
Sbjct: 50  HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL 109

Query: 101 EVNGGKDFIHDQPLTVRNEKDSN 123
             N   D          + +  +
Sbjct: 110 IRNRATDL---------DARMHD 123

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 71.3 bits (176), Expect = 3e-14
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
               N  D   ++ALH AA+  +     +LL+  AN ++++  + TPL  A   G  +  
Sbjct: 147 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 206

Query: 98  RIL 100
           ++L
Sbjct: 207 KVL 209

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 70.6 bits (174), Expect = 6e-14
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           + + +D  T L LAA      ++E L+   A++N  D   ++ L  A    + D   +L
Sbjct: 118 DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 66.7 bits (164), Expect = 1e-12
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDI 96
               N+QD   RT LH A S     + ++L++ +A +L+ +     TPL  A       +
Sbjct: 80  SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 139

Query: 97  CRIL 100
              L
Sbjct: 140 LEDL 143

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 55.9 bits (136), Expect = 5e-09
 Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 14/74 (18%)

Query: 41  PNVQDYDKRTALHLAASEGHAP-------------IVELLLQYKANL-NLKDRWQRTPLT 86
            NV+  D  T L +A+  G                ++   +   A+L N  DR   T L 
Sbjct: 3   VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALH 62

Query: 87  DARLYGHRDICRIL 100
            A  Y   D  + L
Sbjct: 63  LAARYSRSDAAKRL 76

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 45.9 bits (110), Expect = 8e-06
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
           L    + ++ D+  R    +A    H  IV LL     + +
Sbjct: 210 LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD- 78
              A+R         L E    +  D + RTAL   A  G    V LL +  A+L+ +D 
Sbjct: 49  WWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM 108

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           R   T L  A  Y   ++   L
Sbjct: 109 RGGLTALHMAAGYVRPEVVEAL 130

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L F +        ++L E G   + +D     TALH+AA      +VE L++  A++ ++
Sbjct: 81  LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVE 140

Query: 78  DRWQRTPLTDARLYGHRDICRIL 100
           D    T L  AR           
Sbjct: 141 DERGLTALELAREILKTTPKGNP 163

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 66.9 bits (164), Expect = 9e-13
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G    V+D    TAL LA            +Q+   + L+       + + +++ + ++ 
Sbjct: 134 GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK---VINVLEGQVFEYAEVD 190

Query: 98  RILEVNG-GKDFIH 110
            I+E  G GKD  +
Sbjct: 191 EIVEKRGKGKDVEY 204

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
             +  T    AA +     +  LL+   +++  D   RT L      G     R+L
Sbjct: 42  VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLL 96

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 8/59 (13%), Positives = 16/59 (27%), Gaps = 3/59 (5%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +    +      +   +GH+P         A++  +     TP   A           L
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQL 64

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 5/44 (11%), Positives = 11/44 (25%), Gaps = 2/44 (4%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
             +    +   +L   +       +   + A    KD      L
Sbjct: 193 VEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKD--YEDGL 234

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 77.8 bits (193), Expect = 3e-17
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           LS A       + +ML   G   N  D++  T L  A    H   V++LL+  A+  ++ 
Sbjct: 73  LSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 132

Query: 79  RWQRTPLTDARLYGHRDICRILEVNG 104
                 +  A   G+R + +++E + 
Sbjct: 133 DSGYNSMDLAVALGYRSVQQVIESHL 158

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 76.7 bits (190), Expect = 9e-17
 Identities = 20/66 (30%), Positives = 33/66 (50%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           + +    N  D +  T L  AA+ G   +VE LLQ  A+  L  + + + L+ A   G+ 
Sbjct: 23  IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82

Query: 95  DICRIL 100
           DI ++L
Sbjct: 83  DIVKML 88

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 75.9 bits (188), Expect = 1e-16
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G  P +    + +AL LA S+G+  IV++LL    ++N  D    TPL  A    H 
Sbjct: 56  LQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHV 115

Query: 95  DICRIL 100
              ++L
Sbjct: 116 KCVKML 121

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 66.3 bits (163), Expect = 3e-13
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 49  RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
             ++H  A++G    +   ++ +  +N  D    TPL  A  +G   +   L
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFL 55

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 55.9 bits (136), Expect = 2e-09
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L +A  G+ V   +ML E G  P ++      ++ LA + G+  + +++  +   L    
Sbjct: 106 LLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNI 165

Query: 79  R 79
           +
Sbjct: 166 K 166

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 81.4 bits (202), Expect = 7e-17
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L   ++   V +  +L + G   +       T LH+A+  G+  +V+ LLQ++A++N K 
Sbjct: 282 LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT 341

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           +   +PL  A   GH DI  +L
Sbjct: 342 KLGYSPLHQAAQQGHTDIVTLL 363

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 81.4 bits (202), Expect = 7e-17
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A   + + + ++L   G SP+   ++  T LH+AA +    +   LLQY  + N + 
Sbjct: 183 LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES 242

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
               TPL  A   GH ++  +L
Sbjct: 243 VQGVTPLHLAAQEGHAEMVALL 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 79.1 bits (196), Expect = 5e-16
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+     N +     + LH AA +GH  IV LLL+  A+ N       TPL  A+  G+ 
Sbjct: 331 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 390

Query: 95  DICRILEVNGGK 106
            +  +L+V   +
Sbjct: 391 SVTDVLKVVTDE 402

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 78.7 bits (195), Expect = 5e-16
 Identities = 25/66 (37%), Positives = 32/66 (48%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+     N +  D +T LH AA  GH  +V+LLL+  AN NL      TPL  A   GH 
Sbjct: 67  LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 126

Query: 95  DICRIL 100
           +    L
Sbjct: 127 ETVLAL 132

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 78.3 bits (194), Expect = 8e-16
 Identities = 27/66 (40%), Positives = 39/66 (59%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G SPNV +    T LH+AA  GH  + + LLQ KA +N K +  +TPL  A   GH 
Sbjct: 34  LQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 93

Query: 95  DICRIL 100
           ++ ++L
Sbjct: 94  NMVKLL 99

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 78.3 bits (194), Expect = 8e-16
 Identities = 22/66 (33%), Positives = 31/66 (46%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L    +PN+      T LH+AA EGH   V  LL+ +A+     +   TPL  A  YG  
Sbjct: 100 LENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKV 159

Query: 95  DICRIL 100
            +  +L
Sbjct: 160 RVAELL 165

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 77.9 bits (193), Expect = 1e-15
 Identities = 23/63 (36%), Positives = 32/63 (50%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G S         T LH+A+  GH PIV+ LLQ  A+ N+ +    TPL  A   GH ++ 
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVA 63

Query: 98  RIL 100
           + L
Sbjct: 64  KYL 66

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 77.1 bits (191), Expect = 2e-15
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++  +V + ++L      PN    +  T LH+A    +  IV+LLL    + +   
Sbjct: 150 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 209

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
               TPL  A      ++ R L
Sbjct: 210 WNGYTPLHIAAKQNQVEVARSL 231

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 76.8 bits (190), Expect = 3e-15
 Identities = 21/66 (31%), Positives = 31/66 (46%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L +  S         T LH+AA  G   + ELLL+  A+ N   +   TPL  A  + + 
Sbjct: 133 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 192

Query: 95  DICRIL 100
           DI ++L
Sbjct: 193 DIVKLL 198

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 76.0 bits (188), Expect = 4e-15
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G S N +     T LHLAA EGHA +V LLL  +AN NL ++   TPL      GH 
Sbjct: 232 LQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHV 291

Query: 95  DICRIL 100
            +  +L
Sbjct: 292 PVADVL 297

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 75.2 bits (186), Expect = 8e-15
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++     +  +L  +  + N+ +    T LHL A EGH P+ ++L+++   ++   
Sbjct: 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 308

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           R   TPL  A  YG+  + + L
Sbjct: 309 RMGYTPLHVASHYGNIKLVKFL 330

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 54.8 bits (133), Expect = 3e-08
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY---KANLNLKDRWQRTPL 85
           L+ G SPN    D  T L +A   G+  + ++L       + + + D+ + +  
Sbjct: 364 LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFP 417

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 14/121 (11%)

Query: 20  LSFASRGDRVGLNQML--REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L +A  G    + +ML  +     N Q+    TALH AA +G+A IV+LLL   A  +L+
Sbjct: 110 LYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLR 169

Query: 78  DRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN-EVNFDISELNT-L 135
           +  ++     A       + +  +              VR   ++   ++ + S+L    
Sbjct: 170 NIEKKLAFDMATNAACASLLKKKQGTD----------AVRTLSNAEDYLDDEDSDLEHHH 219

Query: 136 H 136
           H
Sbjct: 220 H 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 9/89 (10%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L        Q       LH AA  G+   +   L  +  +N  D+   T L  A   GH+
Sbjct: 60  LIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHK 119

Query: 95  DICRILEVNGGKDFIHDQPLTVRNEKDSN 123
           DI  +L      +          N+++  
Sbjct: 120 DIVEMLFTQPNIEL---------NQQNKL 139

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 60.7 bits (148), Expect = 8e-11
 Identities = 9/76 (11%), Positives = 17/76 (22%), Gaps = 1/76 (1%)

Query: 39  TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICR 98
             P       +  +  A         + L   + ++        T        G   +  
Sbjct: 3   KPPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP 62

Query: 99  ILEVNGGKDFIHDQPL 114
              V   +    D PL
Sbjct: 63  SNYVA-EQAESIDNPL 77

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 9/66 (13%), Positives = 16/66 (24%), Gaps = 5/66 (7%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
             E            T      S+G   ++         +  +      PL +A   G+ 
Sbjct: 32  YIEEGDIIYITDMSDTNWWKGTSKGRTGLIP-----SNYVAEQAESIDNPLHEAAKRGNL 86

Query: 95  DICRIL 100
              R  
Sbjct: 87  SWLREC 92

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 78.4 bits (194), Expect = 2e-16
 Identities = 20/85 (23%), Positives = 30/85 (35%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
           ++Q+   +TALHLAA  G A  VE L    A + + +R   T L  A          +L 
Sbjct: 39  DLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL 98

Query: 102 VNGGKDFIHDQPLTVRNEKDSNEVN 126
                         +   +D     
Sbjct: 99  QPRPSHPRDASDTYLTQSQDCTPDT 123

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 74.1 bits (183), Expect = 5e-15
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G  P  + Y  RT L  A    +  +  LL  + A        + +P + +      
Sbjct: 212 LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271

Query: 95  DI 96
           D 
Sbjct: 272 DN 273

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 73.7 bits (182), Expect = 7e-15
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDYDK-RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
           G   N  +    RT LHLA     A ++ELLL+  A+   +    RTPL  A L  +  +
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240

Query: 97  CRIL 100
            R+L
Sbjct: 241 ARLL 244

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-WQRTPLTDARLYGH 93
                    ++YD  T LH+A     A +V LL    A+LN  +    RTPL  A     
Sbjct: 145 EDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA 204

Query: 94  RDICRIL 100
             +  +L
Sbjct: 205 ASVLELL 211

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 67.6 bits (166), Expect = 9e-13
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKAN---LNLKDRWQRTPLTDARLYGHRDICR 98
                D  TALHLA    H P ++ LL + A    L+L++   +T L  A + G      
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 99  IL 100
            L
Sbjct: 63  KL 64

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 58.3 bits (142), Expect = 9e-10
 Identities = 12/84 (14%), Positives = 20/84 (23%), Gaps = 14/84 (16%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD------- 87
              G    V +    TALHLA          +LLQ + +            +        
Sbjct: 65  YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124

Query: 88  -------ARLYGHRDICRILEVNG 104
                  ++     +     E   
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWR 148

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 1/63 (1%)

Query: 39  TSPNVQDYDKRTALHLAASEGHAP-IVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
            S +           + +              ++  L  ++    TPL  A ++   ++ 
Sbjct: 115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV 174

Query: 98  RIL 100
           R+L
Sbjct: 175 RLL 177

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 5/36 (13%), Positives = 11/36 (30%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY 70
              G        DK +    + S+  +   +   +Y
Sbjct: 245 RAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEY 280

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 75.5 bits (187), Expect = 2e-16
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G +P+++D      +H AA  G    ++ LL+++A++N++D     PL  A   GH  + 
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 119

Query: 98  RILEVNGGKDFIHDQPLTVRNEKDSN 123
             L  +   +            ++  
Sbjct: 120 EFLVKHTASNV---------GHRNHK 136

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 68.9 bits (170), Expect = 4e-14
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+   + N Q+   RTAL      G+  I   LL   AN +LKDR     + DA   G  
Sbjct: 25  LQNNVNVNAQNGFGRTALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83

Query: 95  DICRIL 100
           D  + L
Sbjct: 84  DTLQTL 89

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 68.6 bits (169), Expect = 5e-14
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDI 96
               N++D +    LHLAA EGH  +VE L+++ A N+  ++    T    ARLYG  ++
Sbjct: 93  QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEV 152

Query: 97  CRIL 100
             ++
Sbjct: 153 VSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 62.0 bits (152), Expect = 1e-11
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                L  AA+ G    +  LLQ   N+N ++ + RT L   +  G+ +I R L
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRL 56

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 44.7 bits (107), Expect = 9e-06
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
             +++   TA  LA   G   +V L+    A
Sbjct: 131 GHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 73.2 bits (181), Expect = 2e-16
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A+R   + + ++L   G   N +D + RT LHLAA  GH  +V+LLL+  A++N KD
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           +  RTPL  A   GH ++ ++L
Sbjct: 66  KNGRTPLHLAARNGHLEVVKLL 87

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 66.2 bits (163), Expect = 7e-14
 Identities = 25/54 (46%), Positives = 36/54 (66%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           + RT LHLAA  GH  +V+LLL+  A++N KD+  RTPL  A   GH ++ ++L
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 54

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 46.2 bits (111), Expect = 8e-07
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 35 LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
          L  G   N +D + RT LHLAA  GH  +V+LLL+  A
Sbjct: 55 LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 77.2 bits (191), Expect = 3e-16
 Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 4/89 (4%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
             +    N Q+  ++T LHLA       I E LL    +  L+D    TPL  A   G  
Sbjct: 32  KGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCL 91

Query: 95  DICRILEVNGGKDFIHDQPLTVRNEKDSN 123
               +L             L      + N
Sbjct: 92  ASVGVL-TQSCTTPHLHSIL---KATNYN 116

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 68.3 bits (168), Expect = 3e-13
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ-RTPLTDARLYGHRDICRIL 100
              +Y+  T LHLA+  G+  IVELL+   A++N ++    RT L  A    + D+  +L
Sbjct: 111 KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 68.0 bits (167), Expect = 3e-13
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +  G   N Q+  + RTALHLA    +  +V LLL+  A++N       +P         
Sbjct: 137 VSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196

Query: 94  RDICRIL 100
             I + L
Sbjct: 197 TRIQQQL 203

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN------LNLKDRWQRTPLTDA 88
           L  G  P ++D+   T LHLA  +G    V +L Q          L   +    T L  A
Sbjct: 65  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124

Query: 89  RLYGHRDICRIL 100
            ++G+  I  +L
Sbjct: 125 SIHGYLGIVELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 44  QDYDKRTALHLAASEGHAP----IVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRI 99
              D  + LHLA           ++  +    A LN ++  Q+TPL  A +    +I   
Sbjct: 4   LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA 63

Query: 100 L 100
           L
Sbjct: 64  L 64

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 8/62 (12%), Positives = 13/62 (20%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G   N   Y   +   L        I + L Q                +        
Sbjct: 171 LKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFT 230

Query: 95  DI 96
           + 
Sbjct: 231 EF 232

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 79.1 bits (196), Expect = 3e-16
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G   + +D      LH A S GH  + ELLL++ A +N  D WQ TPL +A      
Sbjct: 78  LQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV 137

Query: 95  DICRIL 100
           ++C +L
Sbjct: 138 EVCSLL 143

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 78.3 bits (194), Expect = 4e-16
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 20  LSFASRGDRVGLNQM----LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
           L  A         Q+    LR+G + N ++ D  T LH+AA   H  ++E+L ++ A +N
Sbjct: 215 LHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274

Query: 76  LKDRWQRTPLTDARLYGHRDICRIL 100
             D   +T L  A L GH   CR+L
Sbjct: 275 ALDSLGQTALHRAALAGHLQTCRLL 299

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 75.6 bits (187), Expect = 3e-15
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A  G+   L  +L     + +  D  K T LHLAA      IV+LLLQ+ A+++ KD
Sbjct: 29  LEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD 88

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
           +    PL +A  YGH ++  +L
Sbjct: 89  KGGLVPLHNACSYGHYEVTELL 110

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 72.9 bits (180), Expect = 3e-14
 Identities = 17/66 (25%), Positives = 28/66 (42%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G   N  D  + T LH AAS+    +  LLL + A+  L +   ++ +  A     R
Sbjct: 111 LKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170

Query: 95  DICRIL 100
           +     
Sbjct: 171 ERLTYE 176

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 72.5 bits (179), Expect = 3e-14
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAP---IVELLLQYKANLNL 76
           L  A   D   + + L        Q     TALH A +  H     + ELLL+  AN+N 
Sbjct: 183 LQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNE 242

Query: 77  KDRWQRTPLTDARLYGHRDICRIL 100
           K++   TPL  A    H D+  +L
Sbjct: 243 KNKDFMTPLHVAAERAHNDVMEVL 266

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 67.9 bits (167), Expect = 1e-12
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAP-IVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
                   +    K+  L  AA  G+   ++ LL     N +  D  + TPL  A  Y  
Sbjct: 11  ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNR 70

Query: 94  RDICRIL 100
             I ++L
Sbjct: 71  VRIVQLL 77

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 16/51 (31%), Positives = 22/51 (43%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
            + G   N  D   +TALH AA  GH     LLL Y ++ ++      T  
Sbjct: 267 HKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAA 317

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 50.2 bits (121), Expect = 7e-07
 Identities = 9/78 (11%), Positives = 21/78 (26%), Gaps = 12/78 (15%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L  G  P + +   ++A+ +A +      +    +  + L             A      
Sbjct: 144 LSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQ------------AAREADL 191

Query: 95  DICRILEVNGGKDFIHDQ 112
              +        +F   Q
Sbjct: 192 AKVKKTLALEIINFKQPQ 209

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 7/58 (12%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
           L  G+ P++      TA  +         V+ +L     +   D      L +A   G
Sbjct: 300 LSYGSDPSIISLQGFTAAQMGNE-----AVQQILSESTPMRTSDVD--YRLLEASKAG 350

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 74.7 bits (185), Expect = 3e-16
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           LR G S + +    RT LH+AASEGHA IVE+LL++ A++N KD  + T L  A  + H+
Sbjct: 54  LRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQ 113

Query: 95  DICRIL 100
           ++  +L
Sbjct: 114 EVVELL 119

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 73.6 bits (182), Expect = 7e-16
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N +D  K TALH A    H  +VELL++Y A+++ + ++ +T    +   G+ D+ 
Sbjct: 90  GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149

Query: 98  RILE 101
            IL+
Sbjct: 150 EILQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 68.2 bits (168), Expect = 6e-14
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
           D+   + LHLAA  GH    E+LL+   + + + +  RTPL  A   GH +I  +L  +G
Sbjct: 31  DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG 90

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 58.9 bits (144), Expect = 9e-11
 Identities = 18/77 (23%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGK 106
           D    L  AA  G    V +L+   A     D    +PL  A  YGH     +L   G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 107 DFIHDQPLTVRNEKDSN 123
                     R+ +   
Sbjct: 60  ----------RDARTKV 66

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 41.2 bits (98), Expect = 1e-04
 Identities = 7/33 (21%), Positives = 16/33 (48%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELL 67
           ++ G   + Q    +TA  ++   G+  + E+L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 76.3 bits (189), Expect = 6e-16
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
            ++  +KR+ LH AA  GH  I  +L+Q  AN++     QRTPL +A    H +  + L
Sbjct: 5   KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 74.0 bits (183), Expect = 3e-15
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A+    V +  ML + G + +    D+RT L  AA   H   V+ L++  A ++ KD
Sbjct: 15  LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKD 74

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
               T L  A   GH ++ + L  NG  D          N +D  
Sbjct: 75  AEGSTCLHLAAKKGHYEVVQYLLSNGQMDV---------NCQDDG 110

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 74.0 bits (183), Expect = 3e-15
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
               +  +    + LH+AA E     V L L   +++ LK++   TPL  A L       
Sbjct: 167 KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSA 226

Query: 98  RILEVNGGKD 107
             +     +D
Sbjct: 227 LQM-SKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 72.4 bits (179), Expect = 1e-14
 Identities = 18/63 (28%), Positives = 29/63 (46%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G+  N++D ++   LH AA  G   I E+LL  K +L+  +    +PL  A      D  
Sbjct: 134 GSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCV 193

Query: 98  RIL 100
            + 
Sbjct: 194 VLF 196

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 70.5 bits (174), Expect = 5e-14
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N QD    T +  A    H  +V+LLL   +++N++D  +   L  A   G  DI  IL
Sbjct: 105 NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 64.4 bits (158), Expect = 6e-12
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGH 93
           ++ G   + +D +  T LHLAA +GH  +V+ LL     ++N +D    TP+  A  Y H
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123

Query: 94  RDICRIL 100
            D+ ++L
Sbjct: 124 VDLVKLL 130

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 45.1 bits (108), Expect = 2e-05
 Identities = 7/55 (12%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           L  A+R +R     +     +   +++ +  T L  A+          + +   +
Sbjct: 181 LHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 74.3 bits (184), Expect = 6e-16
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   + +D      LH A S GH  + ELL+++ A +N+ D W+ TPL +A   G  +IC
Sbjct: 65  GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEIC 124

Query: 98  RIL 100
           ++L
Sbjct: 125 KLL 127

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 70.1 bits (173), Expect = 2e-14
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   NV D  K T LH AA++G   I +LLLQ+ A+   K+R   TPL   +  G  DI 
Sbjct: 98  GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK-DGDTDIQ 156

Query: 98  RIL 100
            +L
Sbjct: 157 DLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 69.3 bits (171), Expect = 3e-14
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
              +  + T LH AA      +VE LLQ+ A+++ KD+    PL +A  YGH ++  +L
Sbjct: 36  RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELL 94

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 59.7 bits (146), Expect = 6e-11
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 1/57 (1%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYK-ANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           + +    L  AA  G    V+ L   +  N    +  Q TPL  A  Y    +   L
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYL 61

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 40.5 bits (96), Expect = 2e-04
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
           L+ G  P  ++ D  T L L   +G   I +LL    A
Sbjct: 128 LQHGADPTKKNRDGNTPLDLVK-DGDTDIQDLLRGDAA 164

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 75.4 bits (186), Expect = 8e-16
 Identities = 21/66 (31%), Positives = 30/66 (45%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           ++E   P+  + +  TALH A    +  IV+ L+   AN+N  D    TPL  A      
Sbjct: 41  VKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100

Query: 95  DICRIL 100
            IC  L
Sbjct: 101 VICMAL 106

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 35  LREGTSPNVQD---YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
           LR+  SP        +    L  AA  G   +V+  ++   + +  +    T L +A   
Sbjct: 5   LRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICG 64

Query: 92  GHRDICRIL 100
            +  I   L
Sbjct: 65  ANYSIVDFL 73

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 9/62 (14%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
                S  + +     AL   ++E     +         +  +D  + T    A L+G  
Sbjct: 143 ADVEQSMGLMNSGAVYALWDYSAEFGD-ELSFREGESVTVLRRDGPEETDWWWAALHGQE 201

Query: 95  DI 96
             
Sbjct: 202 GY 203

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 14/92 (15%)

Query: 35  LREGTSPNVQD-YDKRTALHLAAS--EGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
           ++ G +       D  TA        EG+A     L   + ++ L +      L D    
Sbjct: 107 VQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS-A 165

Query: 92  GHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
              D                + +TV   +D  
Sbjct: 166 EFGDELSFR---------EGESVTV-LRRDGP 187

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 72.8 bits (180), Expect = 9e-16
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L  G   N +D + RT LHLAA  GH  +V+LLL+  A++N KD+  RTPL  A   GH 
Sbjct: 22  LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81

Query: 95  DICRIL 100
           ++ ++L
Sbjct: 82  EVVKLL 87

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 70.8 bits (175), Expect = 4e-15
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N +D + RT LHLAA  GH  +V+LLL+  A++N KD+  RTPL  A   GH ++ 
Sbjct: 58  GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 117

Query: 98  RIL 100
           ++L
Sbjct: 118 KLL 120

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 64.7 bits (159), Expect = 6e-13
 Identities = 25/54 (46%), Positives = 36/54 (66%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           + RT LHLAA  GH  +V+LLL+  A++N KD+  RTPL  A   GH ++ ++L
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 54

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 45.0 bits (108), Expect = 4e-06
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
           G   N +D + RT LHLAA  GH  +V+LLL+  A
Sbjct: 91  GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 76.0 bits (188), Expect = 1e-15
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           +  A+        + L  +G + N+   D  + LH A   GH   V++LL++ A +N   
Sbjct: 63  MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT 122

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
               TPL +A + G  D   +L
Sbjct: 123 ADWHTPLFNACVSGSWDCVNLL 144

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 72.5 bits (179), Expect = 2e-14
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G S   +  D  + +H AA  GH   V  L+ Y  N++ K     TPL  A     R
Sbjct: 145 LQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 203

Query: 95  DICRIL-----EVNGGKD 107
              + L     +VN GK 
Sbjct: 204 ACVKKLLESGADVNQGKG 221

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 72.1 bits (178), Expect = 2e-14
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                   + +H AA  GH   +  L+     +N+      +PL +A L GH    +IL
Sbjct: 53  MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKIL 111

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 69.8 bits (172), Expect = 2e-13
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A  G  +   ++L + G   N    D  T L  A   G    V LLLQ+ A++  + 
Sbjct: 96  LHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES 155

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
               +P+ +A   GH +    L
Sbjct: 156 D-LASPIHEAARRGHVECVNSL 176

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 64.8 bits (159), Expect = 7e-12
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L  G   N Q   + + LH         +  LL+ + A+   K+   + P+         
Sbjct: 210 LESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPL 268

Query: 95  DICRILEVNG 104
                LE  G
Sbjct: 269 AQL-FLEREG 277

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 5/60 (8%)

Query: 54  LAASEGHAPIVELLLQYKANLNLKDRWQ-----RTPLTDARLYGHRDICRILEVNGGKDF 108
           + +S  H      L+   +++   D  Q       P       G R +   L  +   D+
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW 60

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 40.9 bits (97), Expect = 5e-04
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVE-LLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +  G+     D  K+  +  +   G        LL      +    W  +P+ +A ++GH
Sbjct: 15  VPRGSHMASMD-GKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW--SPMHEAAIHGH 71

Query: 94  RDICRIL 100
           +   R L
Sbjct: 72  QLSLRNL 78

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 27/82 (32%), Positives = 40/82 (48%)

Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           FL+  S GD   + ++L  G   N  + D  TALH A  + +  +V+ L++  AN+N  D
Sbjct: 44  FLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD 103

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
                PL  A   G+ DI   L
Sbjct: 104 NEGWIPLHAAASCGYLDIAEYL 125

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 19/70 (27%), Positives = 29/70 (41%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G + N  D +    LH AAS G+  I E L+   A++   +    TPL  A      ++ 
Sbjct: 96  GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155

Query: 98  RILEVNGGKD 107
           +      G D
Sbjct: 156 QNEVNRQGVD 165

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 72.9 bits (180), Expect = 2e-14
 Identities = 22/63 (34%), Positives = 37/63 (58%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
             +         TALH+AA++G+  +++LL+Q + ++N+KD    TPL  A  +G  + C
Sbjct: 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC 248

Query: 98  RIL 100
           RIL
Sbjct: 249 RIL 251

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 67.5 bits (166), Expect = 1e-12
 Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           ++     N++DYD  T LH AA  G      +L++   ++   ++  +T    A      
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILG 278

Query: 95  DICRILEVNGGKDFIHDQPLTVRNEKDSNE 124
            +  + +                +EK   +
Sbjct: 279 YLEELQKKQNLLH----------SEKREKK 298

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 61.7 bits (151), Expect = 9e-11
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           + +     V+  D       A S G    V  LL+  A++N  +    T L  A +  + 
Sbjct: 28  VVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNV 86

Query: 95  DICRIL 100
           D+ + L
Sbjct: 87  DMVKFL 92

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 56.4 bits (137), Expect = 5e-09
 Identities = 11/59 (18%), Positives = 18/59 (30%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N Q  D   A             + L     N     +   T L  A   G+ ++ ++L
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 55.6 bits (135), Expect = 9e-09
 Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 1/59 (1%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
            + D  ++    L    G    +E  +  +    +K       L  A   G  +    L
Sbjct: 2   KMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRL 59

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 9/87 (10%), Positives = 22/87 (25%), Gaps = 18/87 (20%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK-ANLNLKDRWQRTPLTDARLYGHRDI 96
           G      + +  T L +A  E    +++  +  +  ++            +      RD 
Sbjct: 129 GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE-------AARKEEERIMLRDA 181

Query: 97  CRILEVNGGKDFIHDQPLTVRNEKDSN 123
            + L      D               +
Sbjct: 182 RQWLNSGHIND----------VRHAKS 198

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 74.8 bits (185), Expect = 1e-15
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
            N  D    TALHLAA    +   + LL+  A+ N++D   RTPL  A     + + +IL
Sbjct: 18  HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL 77

Query: 101 EVNGGKDFIHDQPLTVRNEKDSN 123
             N   D          + +  +
Sbjct: 78  IRNRATDL---------DARMHD 91

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 74.8 bits (185), Expect = 1e-15
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G + ++Q+  + T L LAA EG     ++LL + AN ++ D   R P   A+   H 
Sbjct: 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 204

Query: 95  DICRIL 100
           DI R+L
Sbjct: 205 DIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 71.7 bits (177), Expect = 1e-14
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
               N  D   ++ALH AA+  +     +LL+  AN ++++  + TPL  A   G  +  
Sbjct: 115 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 174

Query: 98  RIL 100
           ++L
Sbjct: 175 KVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 69.7 bits (172), Expect = 7e-14
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           + + +D  T L LAA      ++E L+   A++N  D   ++ L  A    + D   +L
Sbjct: 86  DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 144

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 67.0 bits (165), Expect = 6e-13
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDI 96
               N+QD   RT LH A S     + ++L++ +A +L+ +     TPL  A       +
Sbjct: 48  SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 107

Query: 97  CRIL 100
              L
Sbjct: 108 LEDL 111

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 45.9 bits (110), Expect = 8e-06
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
            ++ D+  R    +A    H  IV LL +Y    +
Sbjct: 184 RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 74.8 bits (185), Expect = 2e-15
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A   + + + Q+L + G + N Q Y   +ALH A+  G  P+V  L++  A+ +LK+
Sbjct: 154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
               TPL  AR     DI R  
Sbjct: 214 CHNDTPLMVARSRRVIDILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 72.5 bits (179), Expect = 1e-14
 Identities = 17/70 (24%), Positives = 29/70 (41%)

Query: 31  LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL 90
           +N   + G   ++ +  ++T LHLA       +V LL+   A+    DR  +T    A  
Sbjct: 29  VNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88

Query: 91  YGHRDICRIL 100
           +      R L
Sbjct: 89  HRSPTCLRAL 98

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 68.2 bits (168), Expect = 3e-13
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDY-DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
           G   +  D    R+ L  A       +V+LLLQ+ AN+N +     + L  A   G   +
Sbjct: 139 GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198

Query: 97  CRIL 100
            R L
Sbjct: 199 VRTL 202

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 67.1 bits (165), Expect = 7e-13
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-WQRTPLTDARLYGHRDICRIL 100
             ++YD  TALH+A +      V+LLL+  A+++  D    R+PL  A       + ++L
Sbjct: 110 EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL 169

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 65.2 bits (160), Expect = 3e-12
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYK----ANLNLKDRWQRTPLTDARLYGHRDIC 97
              D D  T LH+A  +G+ P V  L+         L++ +  ++TPL  A +     + 
Sbjct: 3   TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV 62

Query: 98  RIL 100
           R+L
Sbjct: 63  RLL 65

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 65.2 bits (160), Expect = 4e-12
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA----NLNLKDRWQRTPLTDARL 90
           +  G SP   D   +TA HLA        +  LL   A    +L  ++    T L  A  
Sbjct: 66  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125

Query: 91  YGHRDICRIL 100
              ++  ++L
Sbjct: 126 TECQETVQLL 135

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 49.4 bits (119), Expect = 7e-07
 Identities = 8/39 (20%), Positives = 16/39 (41%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           +R G   ++++    T L +A S     I+       A+
Sbjct: 203 VRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 75.6 bits (187), Expect = 2e-15
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A +  R  + ++L R G  P ++  +  T   LAA  G   +++L L   A++N  D
Sbjct: 43  LHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD 102

Query: 79  RWQRTPLTDARLYGHRDICRIL 100
            +  T   +A +YG     + L
Sbjct: 103 FYGFTAFMEAAVYGKVKALKFL 124

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 71.7 bits (177), Expect = 3e-14
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLL-QYKANLNLKDRWQRTPLTDARLYGHRDI 96
           G   NV+    +T L LA  + H  +V+ LL Q    +N  D   +T L  A     + I
Sbjct: 209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI 268

Query: 97  CRIL 100
             +L
Sbjct: 269 AELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 69.8 bits (172), Expect = 2e-13
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L  A + + V L Q L   G + N Q+     T LH A       IVELLL++ A+  L+
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68

Query: 78  DRWQRTPLTDARLYGHRDICRIL 100
            +   TP   A + G   + ++ 
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLF 91

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 69.8 bits (172), Expect = 2e-13
 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 13/91 (14%)

Query: 37  EGTSPNVQDYDKRTALHLAASEGHAP----IVELLLQYKANLNLKDRWQRTPLTDARLYG 92
            G   N  D   R AL  A           I  LLL + A++N++    +TPL  A    
Sbjct: 171 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230

Query: 93  HRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
           H  + + L      +          N+ DS+
Sbjct: 231 HLGLVQRLLEQEHIEI---------NDTDSD 252

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 67.9 bits (167), Expect = 8e-13
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 10/73 (13%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ----------RTPLTD 87
           G   N  D+   TA   AA  G    ++ L +  AN+NL+ + +           T L D
Sbjct: 95  GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 154

Query: 88  ARLYGHRDICRIL 100
           A   GH ++ +IL
Sbjct: 155 AAEKGHVEVLKIL 167

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 63.3 bits (155), Expect = 2e-11
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-WQRTPLTDARLYGHRDICRIL 100
             +    L  A       +V+ LL+  AN+N ++     TPL +A      DI  +L
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELL 58

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 60.9 bits (149), Expect = 1e-10
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL-QYKANLNLKDRWQRTPLTDARL 90
           N   +             TAL  AA +GH  ++++LL +  A++N  D   R  L  A L
Sbjct: 132 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191

Query: 91  YGHRDIC 97
                  
Sbjct: 192 SSDDSDV 198

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 59.0 bits (144), Expect = 7e-10
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 20  LSFASRGDRVGLNQML--REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L  A     +GL Q L  +E    N  D D +TAL LA       I ELL +  A+ +  
Sbjct: 223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

Query: 78  D 78
           D
Sbjct: 283 D 283

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 74.8 bits (185), Expect = 2e-15
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 38  GTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
             S N+ D Y K TALH A   G+  ++ LLL+  AN++ ++    + L  A+   +  +
Sbjct: 166 NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWM 225

Query: 97  CRIL---EVNGGKD 107
              L       G D
Sbjct: 226 INHLQEARQAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 70.2 bits (173), Expect = 7e-14
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           ++ G  P++ D +  + +HLAA  GH  IV  L+    ++++ D+   TPL  A    H 
Sbjct: 96  MKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS 155

Query: 95  -DICRIL 100
            D  R+L
Sbjct: 156 VDPTRLL 162

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 69.0 bits (170), Expect = 2e-13
 Identities = 9/59 (15%), Positives = 18/59 (30%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
              D      +  A   G       L++   ++   D+   T L  A +    D+ +  
Sbjct: 3   THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 67.8 bits (167), Expect = 4e-13
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 38  GTSPNVQDYDK-RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
           G   +    D   T LH A  +GH  +V  L++Y A+ +L D    + +  A  +GH  I
Sbjct: 65  GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSI 124

Query: 97  CRIL 100
              L
Sbjct: 125 VAYL 128

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 67.1 bits (165), Expect = 7e-13
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-WQRTPLTDARLYGH 93
           +  G      D +  T LH AA      +V+  +   A ++        TPL  A   GH
Sbjct: 29  VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88

Query: 94  RDICRIL 100
             +   L
Sbjct: 89  LSMVVQL 95

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 67.1 bits (165), Expect = 7e-13
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAP-IVELLLQYKANLNLKDRWQ-RTPLTDARLYGHRD 95
           G   ++ D +  T L  AA   H+     LLL +  ++NL D++   T L  A L G+  
Sbjct: 132 GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT 191

Query: 96  ICRIL 100
           +  +L
Sbjct: 192 VISLL 196

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 51.7 bits (125), Expect = 1e-07
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           G + + Q+    +AL LA    +  ++  L + +      +
Sbjct: 200 GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 22/66 (33%), Positives = 34/66 (51%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           + E   P++ + +  TALH A   GH  IV+ L+Q+  N+N  D    TPL  A    + 
Sbjct: 57  IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116

Query: 95  DICRIL 100
            +C+ L
Sbjct: 117 QVCKFL 122

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 67.3 bits (165), Expect = 7e-13
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK---DRWQRTPLTDARLYGHRDICR 98
           N  D D  T LH AAS  +  + + L++  A +      D        +    G+    +
Sbjct: 97  NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156

Query: 99  ILEVNGGKDFIHDQ----PLTVRNEKDSNEVNFDISELNTL 135
            L     K  I ++     L     ++ +E+     +  T+
Sbjct: 157 FLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTI 197

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 12/56 (21%), Positives = 25/56 (44%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +      L  ++ EG   +V+ ++    + +L +    T L +A   GH +I + L
Sbjct: 34  NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFL 89

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 6/56 (10%), Positives = 16/56 (28%), Gaps = 1/56 (1%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +   + +L               + +   +          L D+ L G  D+ + +
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDSSLEGEFDLVQRI 56

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 12/92 (13%), Positives = 28/92 (30%), Gaps = 10/92 (10%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
              D            EG+    + L   +  + + ++     L D             E
Sbjct: 133 TYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQND------DE 186

Query: 102 VNGGKDFIHDQPLTVRNEKDSNEVNFDISELN 133
           +           +T+ + +D +E+ +  + LN
Sbjct: 187 LP----MKEGDCMTIIHREDEDEIEWWWARLN 214

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 72.8 bits (180), Expect = 2e-15
 Identities = 24/63 (38%), Positives = 36/63 (57%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N  D +  T LHLAA  GH  IVE+LL+  A++N +D++ +T    +   G+ D+ 
Sbjct: 103 GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162

Query: 98  RIL 100
            IL
Sbjct: 163 EIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 71.6 bits (177), Expect = 6e-15
 Identities = 27/66 (40%), Positives = 37/66 (56%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           L+ G   N  D+   T L LAA  GH  IVE+LL+  A++N  D    TPL  A ++GH 
Sbjct: 67  LKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL 126

Query: 95  DICRIL 100
           +I  +L
Sbjct: 127 EIVEVL 132

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 70.5 bits (174), Expect = 1e-14
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
           N +D    T LHLAA  GH  IVE+LL+  A++N  D    TPL  A L+GH +I  +L 
Sbjct: 41  NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL 100

Query: 102 VNG 104
            NG
Sbjct: 101 KNG 103

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 65.8 bits (162), Expect = 6e-13
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +    D    L  AA  G    V +L+   A++N +D    TPL  A   GH +I  +L
Sbjct: 8   HHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVL 66

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 43.1 bits (103), Expect = 4e-05
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQY 70
           N QD   +TA  ++   G+  + E+L + 
Sbjct: 140 NAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 70.9 bits (175), Expect = 2e-15
 Identities = 26/63 (41%), Positives = 36/63 (57%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N +  D  T LHLAA  GHA IV+LLL   A++N + +   TP   A+  GH +I 
Sbjct: 32  GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIV 91

Query: 98  RIL 100
           ++L
Sbjct: 92  KLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 68.9 bits (170), Expect = 1e-14
 Identities = 22/59 (37%), Positives = 30/59 (50%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                D  T LH AA  GHA  V+ LL   A++N + +   TPL  A   GH +I ++L
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLL 61

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 60.1 bits (147), Expect = 2e-11
 Identities = 15/48 (31%), Positives = 20/48 (41%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
           G   N +  D  T  HLA   GH  IV+LL    A++N +        
Sbjct: 65  GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 43/229 (18%)

Query: 183 LRELRHPNILQFLGSIVL----GEEMILITEYLPKGNL----KGILSKKVRLDLPTALRY 234
            R   HPNIL+ +   +       E  L+  +  +G L    + +  K   L     L  
Sbjct: 80  HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139

Query: 235 ALDIAR------------------NLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND 275
            L I R                  N+L  +     + +   +      +  +++     D
Sbjct: 140 LLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199

Query: 276 NSS--------------IASNVLDDTKKDICSFGYIFYQMLEGKH--LQTNNSFDFMHLK 319
            ++              + S+ + D + D+ S G + Y M+ G+          D + L 
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259

Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
             N     Q  R  + L QL+      DP +RP    ++  LE +    
Sbjct: 260 VQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 70.7 bits (174), Expect = 3e-15
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           +  G     +D +  T LHLAA  GH  +V+LLL+  A++  +D++ +T    +   G+ 
Sbjct: 44  MANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103

Query: 95  DICRILE 101
           D+  IL+
Sbjct: 104 DLAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 45  DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
             D    L  AA  G    V +L+   A++  KD+   TPL  A   GH ++ ++L   G
Sbjct: 21  GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80

Query: 105 ----GKDFIHDQPLTVRNEKDSNEV 125
                +D        +  +  + ++
Sbjct: 81  ADVXAQDKFGKTAFDISIDNGNEDL 105

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 55  AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
            +S  H      L+   +++          L +A   G  D  RIL  NG
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDL---GKKLLEAARAGQDDEVRILMANG 47

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 73.6 bits (182), Expect = 4e-15
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
               N       T LHLA  +    + + L++  A++ +KD++ + PL  A   G   + 
Sbjct: 97  KPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI 156

Query: 98  RILEVNGGKDFIHDQPLTVRNEKDSN 123
            +L   G             N +D  
Sbjct: 157 ELLCGLGKSAV---------NWQDKQ 173

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 70.6 bits (174), Expect = 5e-14
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYGH 93
           +  G S  ++D   +  LH AAS G   ++ELL    K+ +N +D+   TPL  A   GH
Sbjct: 127 IENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 186

Query: 94  RDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
            D   +L    G ++         +  D+ 
Sbjct: 187 GDAAVLLVEKYGAEY---------DLVDNK 207

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 68.2 bits (168), Expect = 2e-13
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL---KDRWQRTPLTDARLYGHR 94
            +    +D D R  LH + S     I   LL    N+NL    D    TP   A   G+ 
Sbjct: 26  PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL 85

Query: 95  DICRIL 100
           ++ + L
Sbjct: 86  EVVKSL 91

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 62.9 bits (154), Expect = 2e-11
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQ--YKANLNLKDRWQRTPLTDARLYGHRDICRI 99
           +  D    T  H+A S G+  +V+ L     K +LN       T L  A      ++ + 
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125

Query: 100 L 100
           L
Sbjct: 126 L 126

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 57.8 bits (141), Expect = 7e-10
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 49  RTALHLAASEGHAPIV-ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
              LH A  E     V ELL    + L  KD+  R PL  +  +   +I   L
Sbjct: 3   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFL 55

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 56.3 bits (137), Expect = 3e-09
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLL-QYKANLNLKDRWQRTPL 85
           N QD    T L  A +EGH     LL+ +Y A  +L D       
Sbjct: 168 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAE 212

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 70.5 bits (174), Expect = 7e-15
 Identities = 24/59 (40%), Positives = 33/59 (55%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N +D    T L+LA + GH  IVE+LL+  A++N  D    TPL  A   GH +I  +L
Sbjct: 41  NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVL 99

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 70.1 bits (173), Expect = 8e-15
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N  D    T LHLAA  GH  I E+LL++ A++N +D++ +T    +   G+ D+  IL
Sbjct: 74  NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 61.2 bits (150), Expect = 1e-11
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +    D    L  AA  G    V +L+   A++N KD +  TPL  A  +GH +I  +L
Sbjct: 8   HHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVL 66

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 42.8 bits (102), Expect = 3e-05
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQY 70
           N QD   +TA  ++   G+  + E+L + 
Sbjct: 107 NAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 73.8 bits (182), Expect = 2e-14
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 20  LSFASRGDRVGLNQML--REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L +A++   + + + L   +G++ + QD D +T + LAA EG   +V  L+Q  A++   
Sbjct: 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 342

Query: 78  DRWQRTPLTDARLYGHRDICRIL 100
           D    T    A+   H +I  I 
Sbjct: 343 DATDHTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           +  G   N  D D+ T L LA       +V  L++  A+  + ++ +R+ L  A      
Sbjct: 153 IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 212

Query: 95  DICRIL 100
            +   +
Sbjct: 213 GMMVYM 218

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 5   AAASGDFDMQVIGNFL-SFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
            A +   D       L          G           + + Y  RTALH AA   + PI
Sbjct: 242 VAHNEGRDQVASAKLLVE-------KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPI 294

Query: 64  VELLL-QYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           V+ L+ +  +N + +D   +TP+  A   G  ++   L
Sbjct: 295 VKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 332

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
              P   + +    LH  A+ G   I E + +   N+    R  RT L         +  
Sbjct: 84  LQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKS 141

Query: 98  RILEVNGGKDFI 109
             L V+  K+ I
Sbjct: 142 EDLIVHEAKECI 153

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ---YKANLN 75
           L  A    R  L   L + G  P + +  +R+ALH AA+     ++  +L     K ++ 
Sbjct: 170 LMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE 229

Query: 76  LKDRWQRTPLTDARLYGHRDICRILE--VNGGKDFIHDQPLTVRNEKDSN 123
             DR   T L        RD     +  V  G   +       ++ +   
Sbjct: 230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYK 278

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 60.4 bits (147), Expect = 4e-10
 Identities = 5/71 (7%), Positives = 13/71 (18%), Gaps = 6/71 (8%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL- 100
           N   +            G+  + +            +      L      G   I   + 
Sbjct: 55  NELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPIT 113

Query: 101 ----EVNGGKD 107
                +   + 
Sbjct: 114 RESVNIIDPRH 124

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 44  QDYDKRTALHLAASEGHAPIVELLLQYK--------ANLNLKDRWQRTPLTDARLYGHRD 95
                RT LH  AS   A   E L+ ++        A++N  D  + TPL  A L   R 
Sbjct: 121 DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 180

Query: 96  ICRIL 100
           +   L
Sbjct: 181 LVAYL 185

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           G S    D    TA  LA +  H  IV++  + +  
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 9/88 (10%), Positives = 20/88 (22%), Gaps = 19/88 (21%)

Query: 36  REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRD 95
            +    +      + +L  A+ +G+          K   N    +   P       G+  
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYI---------KRQRNELQHYSLYPNPQGYGNGNDF 75

Query: 96  ICRILEVNGGKDFIHDQPLTVRNEKDSN 123
           +      N               E +  
Sbjct: 76  LGDFNHTNLQIP----------TEPEPE 93

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 73.7 bits (182), Expect = 2e-14
 Identities = 8/63 (12%), Positives = 21/63 (33%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
               +  +    + LH A       +    ++   ++N++D     PL  +       + 
Sbjct: 201 SLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLT 260

Query: 98  RIL 100
           + L
Sbjct: 261 KEL 263

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 72.6 bits (179), Expect = 4e-14
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G SP +Q+    TALHLA   G     + L       +L       P+  A +    D+ 
Sbjct: 43  GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQ--KPIHLAVMANKTDLV 100

Query: 98  RILEVNGGKDFIHDQPLTVRNEKDSNEVN 126
             L V G K+     P ++ NE D  EVN
Sbjct: 101 VAL-VEGAKE-RGQMPESLLNECDEREVN 127

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 72.6 bits (179), Expect = 4e-14
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
              D +    +H+AA +G    V  L++   +  +++R+  T L  A  +G  D  + L
Sbjct: 14  IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYL 72

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 71.4 bits (176), Expect = 9e-14
 Identities = 8/78 (10%), Positives = 20/78 (25%), Gaps = 1/78 (1%)

Query: 24  SRGDRVGL-NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
            + D   +       GT+           +  AA      +++LL +    +        
Sbjct: 265 QKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGA 324

Query: 83  TPLTDARLYGHRDICRIL 100
                 +      + R+ 
Sbjct: 325 GGAVKRKKKAAPAVKRMK 342

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 70.7 bits (174), Expect = 2e-13
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEG--HAPIVELLLQYKANLNLK 77
            S  +  D   +N++       +V+    +TALH     G  +  ++++L+Q  A+   K
Sbjct: 115 ESLLNECDEREVNEIG-----SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169

Query: 78  DRWQRTPLTDARLYGHRDICRIL 100
           D+   TPL  A  + +R+   ++
Sbjct: 170 DKADETPLMRAMEFRNREALDLM 192

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 66.4 bits (163), Expect = 4e-12
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 5/71 (7%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK-----ANLNLKDRWQRTPLTDAR 89
           ++ G SP  +D    T L  A    +   ++L++          L+  ++   + L  A 
Sbjct: 160 VQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAI 219

Query: 90  LYGHRDICRIL 100
           L    D+    
Sbjct: 220 LINWEDVAMRF 230

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 60.7 bits (148), Expect = 3e-10
 Identities = 10/79 (12%), Positives = 26/79 (32%), Gaps = 13/79 (16%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK-------------DRWQ 81
           +  G   N++D +    L+L+       + + LLQ      ++                 
Sbjct: 231 VEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVW 290

Query: 82  RTPLTDARLYGHRDICRIL 100
              +  A     +++ ++L
Sbjct: 291 LDFVPAAADPSKQEVLQLL 309

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.3 bits (142), Expect = 2e-09
 Identities = 3/48 (6%), Positives = 9/48 (18%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
                               +    +  + L   A +  + R +    
Sbjct: 313 LDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSS 360

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 8/56 (14%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG--HRDICRIL 100
             +    L        + E         ++K    +T L      G  + ++ +IL
Sbjct: 110 RGQMPESLLNECDEREVNE------IGSHVKHCKGQTALHWCVGLGPEYLEMIKIL 159

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 71.8 bits (176), Expect = 2e-14
 Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 5/111 (4%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
            + A  G    L + +  + +     D D RTALH A S GH  IVE LLQ    +N KD
Sbjct: 11  CNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 70

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSNEV 125
               +PL  A   G  +I + L V G      +     PL     K+ +E+
Sbjct: 71  DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEI 121

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 60.7 bits (147), Expect = 9e-11
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   N +D    + LH+AAS G   IV+ LL   A++N  ++   TPL  A      +I 
Sbjct: 63  GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIA 122

Query: 98  RILEVNGG----KDFIHDQPLTVRNEKDSNEV 125
            +L   G     KD      +     K + ++
Sbjct: 123 VMLLEGGANPDAKDHYDATAMHRAAAKGNLKM 154

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 60.3 bits (146), Expect = 1e-10
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 4/107 (3%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           AS G    +  +L +G   N  + +  T LH AAS+    I  +LL+  AN + KD +  
Sbjct: 81  ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA 140

Query: 83  TPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSNEV 125
           T +  A   G+  +  IL         +D   + PL +  +++  E 
Sbjct: 141 TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 59.9 bits (145), Expect = 2e-10
 Identities = 15/54 (27%), Positives = 21/54 (38%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                 +LA S     + E +L  K+     D+  RT L  A   GH +I   L
Sbjct: 6   SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFL 59

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 58.0 bits (140), Expect = 7e-10
 Identities = 26/84 (30%), Positives = 43/84 (51%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           AS+        +L  G +P+ +D+   TA+H AA++G+  +V +LL YKA+ N++D    
Sbjct: 114 ASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGN 173

Query: 83  TPLTDARLYGHRDICRILEVNGGK 106
           TPL  A      +  + L   G  
Sbjct: 174 TPLHLACDEERVEEAKFLVTQGAS 197

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 53.3 bits (128), Expect = 3e-08
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A++G+   ++ +L    S N+QD +  T LHLA  E      + L+   A++ ++++ ++
Sbjct: 147 AAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206

Query: 83  TPLTDARLYGHRDICRIL 100
           TPL  A+  G   +    
Sbjct: 207 TPLQVAK--GGLGLILKR 222

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 17  GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL 76
           G  LS  +      L +           D    +A + A ++ +  +V  LL   A  NL
Sbjct: 1   GMDLSRINTWKSKQL-KSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL 59

Query: 77  KDRWQRTPLTDARLYGHRDICRIL 100
            +     PL  A       I +IL
Sbjct: 60  LEN--EFPLHQAATLEDTKIVKIL 81

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 71.8 bits (177), Expect = 3e-14
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-WQRTPLTDARLYGH 93
           L  G   +  D    TAL+ A   G+   V+L ++    L    +   +T    A +   
Sbjct: 82  LFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141

Query: 94  RDICRIL 100
             I    
Sbjct: 142 VSIVSYF 148

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                +    LH AA+     IV++LL    + +  D    T L  A   G+    ++ 
Sbjct: 56  LKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLF 114

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 1/82 (1%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
              A   + V +                  + +H+    GH  ++ LLL Y  + N  + 
Sbjct: 133 FYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS 192

Query: 80  WQRTP-LTDARLYGHRDICRIL 100
               P +  A      ++ + L
Sbjct: 193 LLFIPDIKLAIDNKDIEMLQAL 214

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 63.3 bits (155), Expect = 2e-11
 Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 35  LREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +++            +T+ + A       IV   L    +         + +      GH
Sbjct: 115 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS-TFDLAILLSCIHITIKNGH 173

Query: 94  RDICRIL 100
            D+  +L
Sbjct: 174 VDMMILL 180

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 61.0 bits (149), Expect = 1e-10
 Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 12/90 (13%)

Query: 38  GTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
            TS N  +       + LA       +++ L +Y  N+        +   +  L    +I
Sbjct: 184 MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY-------SANLENVLLDDAEI 236

Query: 97  CRILEVNGG----KDFIHDQPLTVRNEKDS 122
            +++           +  D  +   N+ D 
Sbjct: 237 AKMIIEKHVEYKSDSYTKDLDIVKNNKLDE 266

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 7/65 (10%), Positives = 19/65 (29%), Gaps = 4/65 (6%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR----LYGHRDICRILEV 102
           +  +A         A I +++++           +   +        +       R++ V
Sbjct: 220 NIYSANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYV 279

Query: 103 NGGKD 107
           N  K 
Sbjct: 280 NCVKK 284

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 70.1 bits (173), Expect = 3e-14
 Identities = 16/59 (27%), Positives = 34/59 (57%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N ++ +  T L +A+  G + IV+ LL+  A+++ +D    T    AR++G +++ +I 
Sbjct: 128 NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 69.3 bits (171), Expect = 5e-14
 Identities = 18/59 (30%), Positives = 29/59 (49%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
             +D +  TAL  A       I E LL   +N+N KD   +TPL  + ++G+ ++   L
Sbjct: 62  EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 69.3 bits (171), Expect = 6e-14
 Identities = 18/59 (30%), Positives = 32/59 (54%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N +D+  +T L  +   G++ +   LL++ AN+N ++    TPL  A  YG  +I + L
Sbjct: 95  NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKL 153

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 68.2 bits (168), Expect = 1e-13
 Identities = 16/59 (27%), Positives = 22/59 (37%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           N +D   RT L +A   G    ++ L++    L  KD    T L  A       I   L
Sbjct: 29  NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKL 87

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 49.3 bits (119), Expect = 4e-07
 Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 6/59 (10%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
           +  D +      +   +     ++ L       N +D + RTPL  A + G  +    L
Sbjct: 2   SHMDKNGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKL 54

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 45.5 bits (109), Expect = 8e-06
 Identities = 5/31 (16%), Positives = 13/31 (41%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
           + +D    TA   A   G   ++++  + + 
Sbjct: 161 SARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 62/265 (23%)

Query: 142 QGVFGESQTAKWRGTWV---VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G +GE     W+   +   VKT+ +  +    + +  A     ++E++HPN++Q LG  
Sbjct: 230 GGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAA---VMKEIKHPNLVQLLGVC 285

Query: 199 VLGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDI------------------ 238
                  +ITE++  GNL   L    +  +     L  A  I                  
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA 345

Query: 239 ARNLLQDEGDHLKIGEYWVQMF-YEQIHPNQENSQRNDNS---------SIASNVLDDTK 288
           ARN L  E   +K+ +     F   ++      +               S+A N     K
Sbjct: 346 ARNCLVGENHLVKVAD-----FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIK 399

Query: 289 KDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQ 338
            D+ +FG + +++   G      + +  + L  V       + +         CP ++ +
Sbjct: 400 SDVWAFGVLLWEIATYGM-----SPYPGIDLSQV----YELLEKDYRMERPEGCPEKVYE 450

Query: 339 LIAQCTNKDPSKRPTFAAVIITLEE 363
           L+  C   +PS RP+FA +    E 
Sbjct: 451 LMRACWQWNPSDRPSFAEIHQAFET 475

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 69.6 bits (170), Expect = 2e-13
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           G   + +  D  TALH AA       ++LLL+ +A +   +    T L  AR   H++  
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE 275

Query: 98  RILE 101
            +LE
Sbjct: 276 ELLE 279

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 63.1 bits (153), Expect = 3e-11
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 18  NFLSFASRGDRVGLNQMLREGTSPN------VQDYDKRTALHLAASEGHA---PIVELLL 68
              +     D + + +    G               +   LHLA    +    P+V+ ++
Sbjct: 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII 213

Query: 69  QYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ----PLTVRNEKDSNE 124
           Q   +L+ K     T L  A LY   D  ++L          ++     L +  +K   E
Sbjct: 214 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN----- 73
           L +A+  ++    ++L +        +    TAL +A  + H    ELL Q +A      
Sbjct: 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 289

Query: 74  LNLKDRW 80
           L++   W
Sbjct: 290 LHVDYSW 296

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 17/96 (17%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVE-------LLLQYKANLNLKDRWQRTPLTD 87
           L +G          +  +            E       +  Q    L +KD+W  T L  
Sbjct: 101 LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160

Query: 88  ARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
            +        +++  +  K +         N K+++
Sbjct: 161 VKRCQKPIALKMM-EDYIKKY---------NLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 6/74 (8%), Positives = 22/74 (29%), Gaps = 6/74 (8%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGH------APIVELLLQYKANLNLKDRWQRTPLTDA 88
           + +G     +  +  T        G         + ++ L+  A++    +  +  +   
Sbjct: 62  INKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKN 121

Query: 89  RLYGHRDICRILEV 102
                 D   ++ +
Sbjct: 122 IFNYFVDENEMIPL 135

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 5/84 (5%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLA----ASEGHAPIVELLLQYKANLNLKD 78
           A  G      ++  +G         K   L+        E    I   L+   A++  + 
Sbjct: 14  AMLGTYEDFLELFEKGYEDKE-SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT 72

Query: 79  RWQRTPLTDARLYGHRDICRILEV 102
           +   T        G  DI    E+
Sbjct: 73  KEGTTLFFPLFQGGGNDITGTTEL 96

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 8/58 (13%), Positives = 12/58 (20%), Gaps = 3/58 (5%)

Query: 46  YDKRTALHLAASEGHAPIVELLLQYKANLNL---KDRWQRTPLTDARLYGHRDICRIL 100
             +   +  AA  G       L +          K       L +        I   L
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFL 61

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 68.5 bits (167), Expect = 4e-13
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
           +++   + + Q     TALH      +A  ++LLL+ KA++ + +    TPL  A+   H
Sbjct: 191 LVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH 250

Query: 94  RDICRILE 101
                +L 
Sbjct: 251 EHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 59.6 bits (144), Expect = 3e-10
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 24  SRGDRVGLNQMLREGTSPNVQDY------DKRTALHLAASEG---HAPIVELLLQYKANL 74
              D  GL Q   +G     +           TALHLA          IV+ L+Q   NL
Sbjct: 139 KTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL 198

Query: 75  NLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ----PLTVRNEKDSNEV 125
           + +     T L    L  + +  ++L        I ++    PL +         
Sbjct: 199 DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHC 253

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           L +    D     ++L R   S  + +    T L +A    H    ELL Q  + 
Sbjct: 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 69.4 bits (169), Expect = 5e-13
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 3/125 (2%)

Query: 19  FLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
            L  A+  + +   + L + G + N  D   R  LH A   GH  +  L L+  A+L  +
Sbjct: 238 PLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297

Query: 78  DRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHS 137
           D   R PLT A    + DI  +L +   ++   +       ++   ++  D S + +   
Sbjct: 298 DSEGRDPLTIAMETANADIVTLLRLAKMREA--EAAQGQAGDETYLDIFRDFSLMASDDP 355

Query: 138 SMVEQ 142
             + +
Sbjct: 356 EKLSR 360

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 58.6 bits (141), Expect = 1e-09
 Identities = 28/113 (24%), Positives = 39/113 (34%), Gaps = 6/113 (5%)

Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQ--DYDKRTALHLAASEGHAPIVELLLQYKANLNL 76
           F +         +   L  G   N      D  T L  A +       E LLQ  AN+N 
Sbjct: 204 FRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ 263

Query: 77  KDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ----PLTVRNEKDSNEV 125
            D   R PL  A + GH  +  +    G      D     PLT+  E  + ++
Sbjct: 264 ADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 63/263 (23%), Positives = 95/263 (36%), Gaps = 60/263 (22%)

Query: 142 QGVFGESQTAKWRGTWVV--KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GT  V  KT +K     P   +  A+    +++LRH  ++Q    +V
Sbjct: 194 QGCFGEVWMGTWNGTTRVAIKT-LKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYA-VV 248

Query: 200 LGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI------------------A 239
             E + ++TEY+ KG+L   L  +    L LP  +  A  I                  A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-----ASNVLDD----TKKD 290
            N+L  E    K+ +     F                +       A           K D
Sbjct: 309 ANILVGENLVCKVAD-----FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363

Query: 291 ICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLI 340
           + SFG +  ++  +G+                N E   Q+ R         CP  L  L+
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMV---------NREVLDQVERGYRMPCPPECPESLHDLM 414

Query: 341 AQCTNKDPSKRPTFAAVIITLEE 363
            QC  K+P +RPTF  +   LE+
Sbjct: 415 CQCWRKEPEERPTFEYLQAFLED 437

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 67.6 bits (165), Expect = 3e-12
 Identities = 63/263 (23%), Positives = 94/263 (35%), Gaps = 60/263 (22%)

Query: 142 QGVFGESQTAKWRGTWVV--KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           QG FGE     W GT  V  KT +K     P   +  A+    +++LRH  ++Q    +V
Sbjct: 277 QGCFGEVWMGTWNGTTRVAIKT-LKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYA-VV 331

Query: 200 LGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDI------------------A 239
             E + ++TEY+ KG+L   L       L LP  +  A  I                  A
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-----ASNVLDD----TKKD 290
            N+L  E    K+ +     F                +       A           K D
Sbjct: 392 ANILVGENLVCKVAD-----FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446

Query: 291 ICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLI 340
           + SFG +  ++  +G+                N E   Q+ R         CP  L  L+
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMV---------NREVLDQVERGYRMPCPPECPESLHDLM 497

Query: 341 AQCTNKDPSKRPTFAAVIITLEE 363
            QC  K+P +RPTF  +   LE+
Sbjct: 498 CQCWRKEPEERPTFEYLQAFLED 520

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 63.8 bits (156), Expect = 9e-12
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 13/75 (17%)

Query: 39  TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-------------WQRTPL 85
                + Y+ +TALH+A    +  +V  LL   A+++ +               +   PL
Sbjct: 66  EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPL 125

Query: 86  TDARLYGHRDICRIL 100
           + A   G  +I R+L
Sbjct: 126 SFAACVGSEEIVRLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANL-----NLKDRWQRTPLTDARLYG 92
           G   + +     TALH+AA   +     +L++    L       +    +T L  A +  
Sbjct: 27  GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQ 86

Query: 93  HRDICRIL 100
           + ++ R L
Sbjct: 87  NVNLVRAL 94

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 59.5 bits (145), Expect = 2e-10
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 40  SPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
            P+   Y     L  AA  G   IV LL+++ A++  +D    T L    L  ++  
Sbjct: 113 RPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTF 169

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 6/75 (8%)

Query: 50  TALHLAASEGHAPIV-ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
           + L LAA E     + +LL      ++ +     T L  A LY + +   +L        
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP--- 61

Query: 109 IHDQPLTVRNEKDSN 123
             +        +   
Sbjct: 62  --ELVFEPMTSELYE 74

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 14/84 (16%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR--------------WQRT 83
             S     Y  +TALH+A    +  +V LL++  A++                   +   
Sbjct: 91  NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGEL 150

Query: 84  PLTDARLYGHRDICRILEVNGGKD 107
           PL+ A       I + L  N  + 
Sbjct: 151 PLSLAACTNQLAIVKFLLQNSWQP 174

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 18/83 (21%), Positives = 26/83 (31%), Gaps = 3/83 (3%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ---YKANLNLKDRWQRTPLTDA 88
           N    + T      Y     L LAA      IV+ LLQ     A+++ +D    T L   
Sbjct: 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHAL 191

Query: 89  RLYGHRDICRILEVNGGKDFIHD 111
                  +     V    + I  
Sbjct: 192 VEVADNTVDNTKFVTSMYNEILI 214

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 55.6 bits (134), Expect = 8e-09
 Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 8/91 (8%)

Query: 5   AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIV 64
                D  +       S  +    +G   +        + +    T L LAAS G   ++
Sbjct: 191 LVEVADNTVDNTKFVTSMYNEILILGAK-LHPTLKLEEITNRKGLTPLALAASSGKIGVL 249

Query: 65  ELLLQYKANLNLKDRWQRTPLTDARLYGHRD 95
             +LQ + +       +      A  + H  
Sbjct: 250 AYILQREIH-------EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 20/101 (19%)

Query: 20  LSFASRGDRVGLNQML----REGTSPNVQDYDKRTALHLAASEGH---------APIVEL 66
           LS A+  +++ + + L     +    + +D    T LH                  +   
Sbjct: 152 LSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNE 211

Query: 67  LLQYKANLN-------LKDRWQRTPLTDARLYGHRDICRIL 100
           +L   A L+       + +R   TPL  A   G   +   +
Sbjct: 212 ILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 12/97 (12%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK-------ANLNLKDRWQ-RTPLTDAR 89
                      R ++  A ++ +   +E LL +         +   KD    +T L  A 
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 90  L---YGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
           L    G  D   +L ++  +     +     +  DS 
Sbjct: 63  LNLHNGQNDTIALL-LDVARKTDSLKQFVNASYTDSY 98

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 25/112 (22%)

Query: 4   DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDK-RTALHLA---ASEG 59
           DA A  +     + + L F        L +  +  T    +D +  +T L  A      G
Sbjct: 19  DAVAQSNCQE--LESLLPF--------LQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNG 68

Query: 60  HAPIVELLLQYKANL-----------NLKDRWQRTPLTDARLYGHRDICRIL 100
               + LLL                        +T L  A    +  +  +L
Sbjct: 69  QNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 33/213 (15%), Positives = 77/213 (36%), Gaps = 61/213 (28%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP--TALRY------ 234
           L  ++HPNI+Q+  S      + ++ +Y   G+L   ++ +  +       L +      
Sbjct: 77  LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL 136

Query: 235 AL-----------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
           AL           DI ++N+   +   +++G++ +                   + + ++
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI-------------------ARVLNS 177

Query: 283 VLD----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKS 320
            ++                      + K DI + G + Y++   KH     S   + LK 
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237

Query: 321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
           ++             L+ L++Q   ++P  RP+
Sbjct: 238 ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 63.4 bits (155), Expect = 4e-11
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 32/138 (23%)

Query: 142 QGVFGESQTAKWRGTWV---VKTVIKSHIYHPVKMVLSAKDNCK----LRELRHPNILQF 194
           +G FGE  + + R       VK+                    +    L++  HPNI++ 
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSC------RETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 195 LGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI--------------- 238
           +G     + + ++ E +  G+    L ++  RL + T L+   D                
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237

Query: 239 ---ARNLLQDEGDHLKIG 253
              ARN L  E + LKI 
Sbjct: 238 DLAARNCLVTEKNVLKIS 255

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 10/33 (30%), Positives = 21/33 (63%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
           CP+ + +L+ QC   +P +RP+F+ +   L+ +
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 54/218 (24%)

Query: 183 LRELRHPN--ILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR 240
           L +L+  +  I++     +  + + ++ E     +L   L KK  +D      Y  ++  
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLE 138

Query: 241 ------------------NLLQDEGDHLKI---GEYWVQMFYEQIHPNQENSQRN----- 274
                             N L  +G  LK+   G         Q+ P+  +  ++     
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFG------IANQMQPDTTSVVKDSQVGT 191

Query: 275 --------------DNSSIASNVLDDTKKDICSFGYIFYQMLEGK---HLQTNNSFDFMH 317
                            +  S      K D+ S G I Y M  GK       N       
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251

Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFA 355
           +   N E +F        L+ ++  C  +DP +R +  
Sbjct: 252 IIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIP 288

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 62.8 bits (153), Expect = 5e-11
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 54/218 (24%)

Query: 183 LRELRHPN--ILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR 240
           L +L+  +  I++     +  + + ++ E     +L   L KK  +D      Y  ++  
Sbjct: 61  LNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLE 119

Query: 241 ------------------NLLQDEGDHLKI---GEYWVQMFYEQIHPNQENSQRN----- 274
                             N L  +G  LK+   G         Q+ P+  +  ++     
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFG------IANQMQPDTTSVVKDSQVGT 172

Query: 275 --------------DNSSIASNVLDDTKKDICSFGYIFYQMLEGK---HLQTNNSFDFMH 317
                            +  S      K D+ S G I Y M  GK       N       
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232

Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFA 355
           +   N E +F        L+ ++  C  +DP +R +  
Sbjct: 233 IIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIP 269

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 61.9 bits (151), Expect = 7e-11
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCK---LRE------LRHPN 190
           QG F +     ++G               V  K++  A  N              L H +
Sbjct: 18  QGTFTKI----FKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73

Query: 191 ILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIA 239
           ++   G  V G+E IL+ E++  G+L   L   K  +++   L  A  +A
Sbjct: 74  LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLA 123

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 62.3 bits (152), Expect = 8e-11
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 41/144 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-------LRE------LRH 188
            G FG      ++G W+ +   K  I   +K +   ++          L E      + +
Sbjct: 25  SGAFGTV----YKGLWIPEGE-KVKIPVAIKEL---REATSPKANKEILDEAYVMASVDN 76

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI--------- 238
           P++ + LG I L   + LIT+ +P G L   +   K  +     L + + I         
Sbjct: 77  PHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135

Query: 239 ---------ARNLLQDEGDHLKIG 253
                    ARN+L     H+KI 
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKIT 159

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 62.0 bits (150), Expect = 9e-11
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 41  PNVQ-DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
            N+  D    T LH   S  +  +V+ L+++ +N    D    + L  A    +
Sbjct: 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
           N QD +  T L++AA  G+  IV+ LL Y A+  + ++    P+
Sbjct: 277 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 320

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 17/142 (11%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAP----IVELLLQYKANL 74
           L + +    + L + L + G++    D    + L  A    +         LL      L
Sbjct: 135 LHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL 194

Query: 75  NLKDRWQRTPL------------TDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDS 122
            L+D   RT L            + A  Y    +   +     +              D 
Sbjct: 195 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 254

Query: 123 NEVNFDISELNTLHSSMVEQGV 144
           N    D    N     ++   +
Sbjct: 255 NGERKDSILENLDLKWIIANML 276

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 29  VGLNQMLREGTSPNVQDYDKRTALHLAASEGHAP----IVELLLQYKANLNLKDRWQRTP 84
           + +  ++++   P     +++ +     +          ++L       LN +D    T 
Sbjct: 227 ILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 286

Query: 85  LTDARLYGHRDICRIL 100
           L  A   G+  I   L
Sbjct: 287 LNIAARLGNISIVDAL 302

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 62.6 bits (152), Expect = 9e-11
 Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 13/113 (11%)

Query: 25  RGDRVGLNQMLREGTSPN------VQDYDKRTALHLA---ASEGHAPIVELLLQYKANLN 75
             D + + +    G               +   LHLA   A++   P+V+ ++Q   +L+
Sbjct: 142 NRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD 201

Query: 76  LKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ----PLTVRNEKDSNE 124
            K     T L  A LY   D  ++L          ++     L +  +K   E
Sbjct: 202 AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 77/241 (31%)

Query: 183 LRELRHPNILQFLG--SIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L   K R+D    L+Y   I 
Sbjct: 96  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155

Query: 239 -----------------ARNLLQDEGDHLKIG-------------EYWVQ---------M 259
                             RN+L +  + +KIG              Y V+          
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 215

Query: 260 FYEQIHPNQENSQRNDNS-SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL 318
             E +          ++  S+AS        D+ SFG + Y++        +   +FM +
Sbjct: 216 APESL---------TESKFSVAS--------DVWSFGVVLYELFTYIEKSKSPPAEFMRM 258

Query: 319 KSVNFEPKFQISRCPNRLKQ----------------LIAQCTNKDPSKRPTFAAVIITLE 362
              + + +  +      LK                 ++ +C N + ++RP+F  + + ++
Sbjct: 259 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318

Query: 363 E 363
           +
Sbjct: 319 Q 319

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 54/218 (24%)

Query: 183 LRELRHPN--ILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR 240
           L +L+  +  I++     +  + + ++ E     +L   L KK  +D      Y  ++  
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLE 166

Query: 241 ------------------NLLQDEGDHLKI---GEYWVQMFYEQIHPNQENSQRN----- 274
                             N L  +G  LK+   G         Q+ P+  +  ++     
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFG------IANQMQPDTTSVVKDSQVGA 219

Query: 275 --------------DNSSIASNVLDDTKKDICSFGYIFYQMLEGK---HLQTNNSFDFMH 317
                            +  S      K D+ S G I Y M  GK       N       
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279

Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFA 355
           +   N E +F        L+ ++  C  +DP +R +  
Sbjct: 280 IIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIP 316

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 40/203 (19%), Positives = 64/203 (31%), Gaps = 35/203 (17%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYAL------ 236
              L  P I+   G++  G  + +  E L  G+L  ++ +   L    AL Y        
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL 163

Query: 237 -----------DI-ARNLLQD-EGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                      D+ A N+L   +G    + ++        + P+           I    
Sbjct: 164 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA---LCLQPDGLGKSLLTGDYIPGTE 220

Query: 280 ---ASNVLD----DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQI-S 330
              A  V+     D K DI S   +   ML G H  T           +    P  +I  
Sbjct: 221 THMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPP 280

Query: 331 RCPNRLKQLIAQCTNKDPSKRPT 353
            C     Q I +   K+P  R +
Sbjct: 281 SCAPLTAQAIQEGLRKEPVHRAS 303

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-------------WQRTP 84
                 + Y   +ALH+A  +     V+LL++  A+++L+               +   P
Sbjct: 80  NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELP 139

Query: 85  LTDARLYGHRDICRILEVNGGK 106
           L+ A      D+   L  N  +
Sbjct: 140 LSLAACTKQWDVVTYLLENPHQ 161

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
              +  + +AL +   +G   +   L        + +    TPL  A   G  +I R +
Sbjct: 182 IADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 49.0 bits (117), Expect = 9e-07
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
                   + ++   T L LAA EG   I   +LQ + +
Sbjct: 208 CPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 14/111 (12%), Positives = 26/111 (23%), Gaps = 23/111 (20%)

Query: 4   DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAA---SEGH 60
              + G  +   +   L +                 S   +    +T L  A     +G 
Sbjct: 8   SVVSRGVPEE--LTGLLEYL-------RWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGV 58

Query: 61  APIVELLLQY-----------KANLNLKDRWQRTPLTDARLYGHRDICRIL 100
              +  LLQ             A    +     + L  A         ++L
Sbjct: 59  NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLL 109

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 30/208 (14%), Positives = 73/208 (35%), Gaps = 47/208 (22%)

Query: 183 LRELRHPNILQFLGSIVLGEE----MILITEYLPKGNLKGILSKKVRLDLPTALRYALDI 238
           L+ L+HPNI++F  S     +    ++L+TE +  G LK  L +   + +     +   I
Sbjct: 79  LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQI 138

Query: 239 AR--------------------NLLQDEGD-HLKIGEYWVQMFYEQIHPNQENSQRNDNS 277
            +                    N+        +KIG+  +              + +   
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----------KRASFAK 188

Query: 278 SI-------ASNVLD---DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPK 326
           ++       A  + +   D   D+ +FG    +M   ++  +   +   ++ +  +    
Sbjct: 189 AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 248

Query: 327 FQISRCPNR-LKQLIAQCTNKDPSKRPT 353
               +     +K++I  C  ++  +R +
Sbjct: 249 ASFDKVAIPEVKEIIEGCIRQNKDERYS 276

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 29/137 (21%)

Query: 142 QGVFGESQTAKWRGTWVVKTV-IKSHIYHPVKMVLSAKDNCKLRE------LRHPNILQF 194
            G FG  +   ++   VVKTV +K           + KD   L E      L +P I++ 
Sbjct: 27  SGNFGTVKKGYYQMKKVVKTVAVKI--LKNEANDPALKDEL-LAEANVMQQLDNPYIVRM 83

Query: 195 LGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI---------------- 238
           +G I   E  +L+ E    G L   L +   +     +     +                
Sbjct: 84  IG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142

Query: 239 --ARNLLQDEGDHLKIG 253
             ARN+L     + KI 
Sbjct: 143 LAARNVLLVTQHYAKIS 159

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 53/223 (23%)

Query: 183 LRELRHPNILQFLGSIVLGEEMI-------------LITEYLPKGNLKG-ILSKKVRLDL 228
           L  L H  ++++  + +     +             +  EY   G L   I S+ +    
Sbjct: 56  LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115

Query: 229 PTALRY------AL-----------DI-ARNLLQDEGDHLKIG------EYWVQMFYEQI 264
               R       AL           D+   N+  DE  ++KIG           +   ++
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175

Query: 265 HPNQENSQRNDNSS------------IASNVLDDTKKDICSFGYIFYQMLEG--KHLQTN 310
                    ++ +S            +      + K D+ S G IF++M+      ++  
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235

Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
           N    +   S+ F P F         K++I    + DP+KRP 
Sbjct: 236 NILKKLRSVSIEFPPDFD-DNKMKVEKKIIRLLIDHDPNKRPG 277

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 27/134 (20%)

Query: 142 QGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVL 200
           +G FG+     +RG  V VK  IK+        +  A     + +LRH N++Q LG IV 
Sbjct: 31  KGEFGDVMLGDYRGNKVAVKC-IKND-ATAQAFLAEAS---VMTQLRHSNLVQLLGVIVE 85

Query: 201 GEEMILI-TEYLPKGNLKGIL--SKKVRLDLPTALRYALDI------------------A 239
            +  + I TEY+ KG+L   L    +  L     L+++LD+                  A
Sbjct: 86  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145

Query: 240 RNLLQDEGDHLKIG 253
           RN+L  E +  K+ 
Sbjct: 146 RNVLVSEDNVAKVS 159

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 27/209 (12%), Positives = 58/209 (27%), Gaps = 44/209 (21%)

Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR--------------LDLPTA 231
            +H +++++  +    + M++  EY   G+L   +S+  R              L +   
Sbjct: 68  GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127

Query: 232 LRYA-------LDI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQEN-------SQRNDN 276
           LRY        +DI   N+                      +            ++ +  
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 187

Query: 277 SS------------IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE 324
                         +  N     K DI +           + L  N    +  ++     
Sbjct: 188 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-QWHEIRQGRLP 246

Query: 325 PKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
              Q         +L+    + DP +RP+
Sbjct: 247 RIPQ--VLSQEFTELLKVMIHPDPERRPS 273

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 38/143 (26%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKM----VLSAKDNCK--LRE------LRHP 189
            G FG       RG W         +   VK     VLS  +     +RE      L H 
Sbjct: 28  DGSFGVV----RRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI---------- 238
           N+++  G +VL   M ++TE  P G+L   L   +    L T  RYA+ +          
Sbjct: 82  NLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140

Query: 239 --------ARNLLQDEGDHLKIG 253
                   ARNLL    D +KIG
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIG 163

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 59.3 bits (144), Expect = 7e-10
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 21/91 (23%)

Query: 183 LRELRHPNILQFLG--SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
           LR L H +I+++ G         + L+ EY+P G+L+  L +   + L   L +A  I  
Sbjct: 87  LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 145

Query: 239 ----------------ARNLLQDEGDHLKIG 253
                           ARN+L D    +KIG
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIG 176

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.9 bits (143), Expect = 9e-10
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 54/212 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----SKKVRLDLPTALRY---- 234
           L++L HPN++++  S +   E+ ++ E    G+L  ++     +K  +   T  +Y    
Sbjct: 86  LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145

Query: 235 --AL-----------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIA 280
             AL           DI   N+       +K+G+  +                +  ++ A
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL------------GRFFSSKTTAA 193

Query: 281 SNVLD---------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL----KSV 321
            +++                + K DI S G + Y+M   +     +  +   L    +  
Sbjct: 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 253

Query: 322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
           ++ P          L+QL+  C N DP KRP 
Sbjct: 254 DYPP-LPSDHYSEELRQLVNMCINPDPEKRPD 284

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 47/264 (17%), Positives = 86/264 (32%), Gaps = 70/264 (26%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCK-----LRELRHPNILQ 193
            G +G  Q  + +      V K +          M  + K         LREL+HPNI++
Sbjct: 16  TGSYGRCQKIRRKSDGKILVWKELDYG------SMTEAEKQMLVSEVNLLRELKHPNIVR 69

Query: 194 FLGSIVLGEEMIL--ITEYLPKGNLKGILSK----KVRLDLPTALRYALDIA-------- 239
           +   I+      L  + EY   G+L  +++K    +  LD    LR    +         
Sbjct: 70  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129

Query: 240 ---------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
                           N+  D   ++K+G++ +                  ++S A   +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH------------DTSFAKTFV 177

Query: 285 D---------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI 329
                           + K DI S G + Y++       T  S   +  K    + +   
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237

Query: 330 SRCPNRLKQLIAQCTNKDPSKRPT 353
            R  + L ++I +  N     RP+
Sbjct: 238 YRYSDELNEIITRMLNLKDYHRPS 261

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 25/133 (18%)

Query: 142 QGVFGESQTAKWRGTWVV--KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
            G FG  +  KW+G + V  K  IK       +    A+    + +L HP +++F G   
Sbjct: 18  SGQFGVVKLGKWKGQYDVAVKM-IKEGSMSEDEFFQEAQ---TMMKLSHPKLVKFYGVCS 73

Query: 200 LGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------------AR 240
               + ++TEY+  G L   L S    L+    L    D+                  AR
Sbjct: 74  KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAAR 133

Query: 241 NLLQDEGDHLKIG 253
           N L D    +K+ 
Sbjct: 134 NCLVDRDLCVKVS 146

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 59.0 bits (143), Expect = 9e-10
 Identities = 49/250 (19%), Positives = 82/250 (32%), Gaps = 66/250 (26%)

Query: 183 LRELR-HPNILQFLGSIVLGEEM-------ILITEYLPKGNLKGILSK---KVRLDLPTA 231
           +++L  HPNI+QF  +  +G+E         L+   L KG L   L K   +  L   T 
Sbjct: 79  MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV 138

Query: 232 LRYALDIAR--------------------NLLQDEGDHLKIG----------EYWVQMFY 261
           L+      R                    NLL      +K+                   
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198

Query: 262 EQIHPNQENSQRN-----------DNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTN 310
           ++    +E   RN           D   + SN     K+DI + G I Y +   +H    
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIID---LYSNFPIGEKQDIWALGCILYLLCFRQH---- 251

Query: 311 NSFD---FMHLKSVNFE-PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
             F+    + + +  +  P             LI      +P +R + A V+  L+E++A
Sbjct: 252 -PFEDGAKLRIVNGKYSIPPH--DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308

Query: 367 CLGRSALCPT 376
               +   P 
Sbjct: 309 ARNVNPKSPI 318

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 28/165 (16%)

Query: 113 PLTVRNEKDSNEVNFDISELNTLHSSMVE---QGVFGESQTAKWRGTWVV--KTVIKSHI 167
           PL  +N   +  + +   E++    + ++    G FG  +  KWRG + V  K  IK   
Sbjct: 2   PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKM-IKEGS 60

Query: 168 YHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRL 226
               + +  AK    +  L H  ++Q  G       + +ITEY+  G L   L   + R 
Sbjct: 61  MSEDEFIEEAK---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRF 117

Query: 227 DLPTALRYALDI------------------ARNLLQDEGDHLKIG 253
                L    D+                  ARN L ++   +K+ 
Sbjct: 118 QTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 162

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 41/144 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-------LRE------LRH 188
            G FG      ++G W+ +   K  I   +K +   ++          L E      + +
Sbjct: 25  SGAFGTV----YKGLWIPEGE-KVKIPVAIKEL---REATSPKANKEILDEAYVMASVDN 76

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI--------- 238
           P++ + LG I L   + LIT+ +P G L   +   K  +     L + + I         
Sbjct: 77  PHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135

Query: 239 ---------ARNLLQDEGDHLKIG 253
                    ARN+L     H+KI 
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKIT 159

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 25/133 (18%)

Query: 142 QGVFGESQTAKWRGTWVV--KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
            G FG      W     V  KT I+         +  A+    + +L HP ++Q  G  +
Sbjct: 18  SGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAE---VMMKLSHPKLVQLYGVCL 73

Query: 200 LGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------------AR 240
               + L+TE++  G L   L +++      T L   LD+                  AR
Sbjct: 74  EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 133

Query: 241 NLLQDEGDHLKIG 253
           N L  E   +K+ 
Sbjct: 134 NCLVGENQVIKVS 146

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 39/143 (27%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV-----KMVLSAKDNCK-LRE------LRHP 189
            GVFG       +G W+ +      I  PV     +     +              L H 
Sbjct: 23  SGVFGTV----HKGVWIPE---GESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 75

Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI---------- 238
           +I++ LG +  G  + L+T+YLP G+L   +   +  L     L + + I          
Sbjct: 76  HIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134

Query: 239 --------ARNLLQDEGDHLKIG 253
                   ARN+L      +++ 
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVA 157

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 14/80 (17%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR--------------WQRTPLTD 87
               Y  +TALH+A        VELL++  A+++ + R              +   PL+ 
Sbjct: 87  RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSL 146

Query: 88  ARLYGHRDICRILEVNGGKD 107
           A       I   L  NG K 
Sbjct: 147 AACTNQPHIVHYLTENGHKQ 166

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 13/65 (20%), Positives = 18/65 (27%), Gaps = 3/65 (4%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ---YKANLNLKDRWQRTPLTDA 88
                +        Y     L LAA      IV  L +    +A+L  +D    T L   
Sbjct: 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHAL 183

Query: 89  RLYGH 93
                
Sbjct: 184 VAIAD 188

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 20/108 (18%)

Query: 20  LSFASRGDRVGLNQML----REGTSPNVQDYDKRTALHLAASEGH---------APIVEL 66
           LS A+  ++  +   L     +      QD    T LH   +              + +L
Sbjct: 144 LSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDL 203

Query: 67  LLQYKANLN-------LKDRWQRTPLTDARLYGHRDICRILEVNGGKD 107
           LL   A L        L +    +PL  A   G   I + +      D
Sbjct: 204 LLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 12/69 (17%)

Query: 43  VQDYDKRTALHLAAS----EGHAPIVELLLQYKANLNLKDRWQ----RTPLTDARL---Y 91
           ++ ++ R  L    S    +G   ++  LL +K  L  ++  +    +T L  A L    
Sbjct: 1   MKVFN-RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSA 59

Query: 92  GHRDICRIL 100
           G  D   IL
Sbjct: 60  GRNDTIPIL 68

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 6/35 (17%), Positives = 15/35 (42%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
             + + D  + L +AA  G   I + +++ +    
Sbjct: 218 EALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 22/100 (22%)

Query: 23  ASRGDRVGLNQM----LREGTSPNVQDYDK----RTALHLAA---SEGHAPIVELLLQY- 70
            SRG   GL  +    L        +++ +    +T L  A    S G    + +LL   
Sbjct: 13  VSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIA 72

Query: 71  ----------KANLNLKDRWQRTPLTDARLYGHRDICRIL 100
                      +         +T L  A     +    +L
Sbjct: 73  EKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELL 112

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 42/145 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-------------LRH 188
           +G FG      + G ++ +   +      +K +       ++++             L H
Sbjct: 31  KGHFGVV----YHGEYIDQAQNRIQC--AIKSL---SRITEMQQVEAFLREGLLMRGLNH 81

Query: 189 PNILQFLGSIVLGEEMIL-ITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI-------- 238
           PN+L  +G ++  E +   +  Y+  G+L   + S +    +   + + L +        
Sbjct: 82  PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141

Query: 239 ----------ARNLLQDEGDHLKIG 253
                     ARN + DE   +K+ 
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVA 166

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 2/68 (2%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ--RTPLTDARLYG 92
           L       V   +   A  LAA  GH  ++  L +      +             A   G
Sbjct: 115 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENG 174

Query: 93  HRDICRIL 100
           H  +   L
Sbjct: 175 HLHVLNRL 182

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 3/66 (4%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR 94
           ++          D    L LA   G+     LLL   + L L               G  
Sbjct: 306 IKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTK---ANNYYINETGGRL 362

Query: 95  DICRIL 100
           D+  + 
Sbjct: 363 DLRAVA 368

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 50.7 bits (121), Expect = 5e-07
 Identities = 26/225 (11%), Positives = 55/225 (24%), Gaps = 37/225 (16%)

Query: 34  MLREGTSPNVQD--YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR---TPLTDA 88
           +     +  +     +   A  LAA  GH  ++  L +                     A
Sbjct: 147 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 206

Query: 89  RLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGES 148
              GH ++   L             L      +       ++     H + +++      
Sbjct: 207 VGRGHHNVINFL-------LDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFK 259

Query: 149 QTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILIT 208
            +       +V        ++ ++ ++   D   L      + ++FL SI   + +    
Sbjct: 260 LSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLL------DDIRFLLSIPGIKALAPTA 313

Query: 209 EYLPKGNLKGILSKKVRLDLPTALRYA-----LDIARNLLQDEGD 248
                 N                LR A           LL     
Sbjct: 314 TIPGDAN--------------ELLRLALRLGNQGACALLLSIPSV 344

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 10/89 (11%), Positives = 22/89 (24%)

Query: 12  DMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK 71
           +M+ +   L            Q+  +     ++         +         + LLL   
Sbjct: 59  NMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSD 118

Query: 72  ANLNLKDRWQRTPLTDARLYGHRDICRIL 100
             + +           A   GH  +   L
Sbjct: 119 EIVKVIQAENYQAFRLAAENGHLHVLNRL 147

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 21/92 (22%)

Query: 183 LRELRHPNILQFLG--SIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI- 238
           L+ L+H NI+++ G         + LI EYLP G+L+  L   K R+D    L+Y   I 
Sbjct: 65  LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124

Query: 239 -----------------ARNLLQDEGDHLKIG 253
                             RN+L +  + +KIG
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIG 156

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 39/144 (27%)

Query: 142 QGVFGESQTAKWRGTWV-----------VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPN 190
           +G FG          +            VK +  S            +    L+ L    
Sbjct: 33  KGNFGSV----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI---LKALHSDF 85

Query: 191 ILQFLG--SIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI--------- 238
           I+++ G       + + L+ EYLP G L+  L   + RLD    L Y+  I         
Sbjct: 86  IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145

Query: 239 ---------ARNLLQDEGDHLKIG 253
                    ARN+L +   H+KI 
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIA 169

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 35/141 (24%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMV---LSAKDNCK-LRE------LRHPNI 191
            G  GE       G    +   +  +   +K +    + +     L E        HPNI
Sbjct: 59  SGDSGEV----CYGRL--RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------ 238
           ++  G +  G   +++TEY+  G+L   L +   +  +   +     +            
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172

Query: 239 ------ARNLLQDEGDHLKIG 253
                 ARN+L D     K+ 
Sbjct: 173 VHRDLAARNVLVDSNLVCKVS 193

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 21/92 (22%)

Query: 183 LRELRHPNILQFLG--SIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI- 238
           LR L H NI+++ G  +   G  + LI E+LP G+LK  L   K +++L   L+YA+ I 
Sbjct: 77  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136

Query: 239 -----------------ARNLLQDEGDHLKIG 253
                            ARN+L +    +KIG
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 42/144 (29%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-------LRE------LRH 188
           +G FG+      +G +   +     +   +K     K+          L+E        H
Sbjct: 25  EGQFGDV----HQGIY--MSPENPALAVAIKTC---KNCTSDSVREKFLQEALTMRQFDH 75

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI--------- 238
           P+I++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +         
Sbjct: 76  PHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 134

Query: 239 ---------ARNLLQDEGDHLKIG 253
                    ARN+L    D +K+G
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLG 158

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           CP  L  L+ +C   DPS+RP F  +   L  
Sbjct: 242 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 34/141 (24%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMV---LSAKDNCK-LRE------LRHPNI 191
            G FGE     ++G     +  K  +   +K +    + K     L E        H NI
Sbjct: 54  AGEFGEV----YKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------ 238
           ++  G I   + M++ITEY+  G L   L  K     +   +     I            
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168

Query: 239 ------ARNLLQDEGDHLKIG 253
                 ARN+L +     K+ 
Sbjct: 169 VHRDLAARNILVNSNLVCKVS 189

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 36/141 (25%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMV---LSAKDNCK-LRE------LRHPNI 191
           +G FGE     + G +      K ++   VK      +  +  K + E      L HP+I
Sbjct: 22  EGFFGEV----YEGVYTNHKGEKINV--AVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------ 238
           ++ +G I+  E   +I E  P G L   L   K  L + T + Y+L I            
Sbjct: 76  VKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134

Query: 239 ------ARNLLQDEGDHLKIG 253
                  RN+L    + +K+G
Sbjct: 135 VHRDIAVRNILVASPECVKLG 155

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           CP  L  L+ +C + DPS RP F  ++ +L +
Sbjct: 239 CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 270

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 27/190 (14%)

Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR---- 240
            +HP  ++   +   G  + L TE     +L+         L       Y  D       
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAH 172

Query: 241 --------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD- 285
                         N+        K+G++ + +            Q  D   +A  +L  
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG--TAGAGEVQEGDPRYMAPELLQG 230

Query: 286 --DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQC 343
              T  D+ S G    ++     L       +  L+     P+F  +   + L+ ++   
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGE-GWQQLRQGYLPPEFT-AGLSSELRSVLVMM 288

Query: 344 TNKDPSKRPT 353
              DP  R T
Sbjct: 289 LEPDPKLRAT 298

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 35/138 (25%)

Query: 142 QGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCK----LRELRHPNILQFLG 196
           +G FG+     +RG  V VK  IK+          +A+        + +LRH N++Q LG
Sbjct: 203 KGEFGDVMLGDYRGNKVAVKC-IKNDA--------TAQAFLAEASVMTQLRHSNLVQLLG 253

Query: 197 SIVLGEEMI-LITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--------------- 238
            IV  +  + ++TEY+ KG+L   L  + R  L     L+++LD+               
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 313

Query: 239 ---ARNLLQDEGDHLKIG 253
              ARN+L  E +  K+ 
Sbjct: 314 DLAARNVLVSEDNVAKVS 331

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 142 QGVFGESQTAKWRGTWV---VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G +GE     W+   +   VKT +K       + +  A     ++E++HPN++Q LG  
Sbjct: 23  GGQYGEVYEGVWKKYSLTVAVKT-LKEDTMEVEEFLKEAA---VMKEIKHPNLVQLLGVC 78

Query: 199 VLGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDI------------------ 238
                  +ITE++  GNL   L    +  +     L  A  I                  
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138

Query: 239 ARNLLQDEGDHLKIG 253
           ARN L  E   +K+ 
Sbjct: 139 ARNCLVGENHLVKVA 153

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 27/134 (20%)

Query: 142 QGVFGESQTAKWRGTWVV--KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
            G FGE     + G   V  K+ +K     P   +  A     +++L+H  +++    +V
Sbjct: 23  AGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEAN---LMKQLQHQRLVRLYA-VV 77

Query: 200 LGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDI------------------A 239
             E + +ITEY+  G+L   L     ++L +   L  A  I                  A
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 137

Query: 240 RNLLQDEGDHLKIG 253
            N+L  +    KI 
Sbjct: 138 ANILVSDTLSCKIA 151

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 36/141 (25%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMV---LSAKDNCK-LRE------LRHPNI 191
           +G FG+      +G +   +     +   +K      S     K L+E        HP+I
Sbjct: 400 EGQFGDV----HQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------ 238
           ++ +G ++    + +I E    G L+  L  +K  LDL + + YA  +            
Sbjct: 454 VKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512

Query: 239 ------ARNLLQDEGDHLKIG 253
                 ARN+L    D +K+G
Sbjct: 513 VHRDIAARNVLVSSNDCVKLG 533

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           CP  L  L+ +C   DPS+RP F  +   L  
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 32/155 (20%), Positives = 52/155 (33%), Gaps = 52/155 (33%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCKLRE-------------L 186
           QG FG      + G    K V+K      V  K V    +   +RE              
Sbjct: 35  QGSFGMV----YEGVA--KGVVKDEPETRVAIKTV---NEAASMRERIEFLNEASVMKEF 85

Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----------SKKVRLDLPTALRYAL 236
              ++++ LG +  G+  ++I E + +G+LK  L                 L   ++ A 
Sbjct: 86  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145

Query: 237 DI------------------ARNLLQDEGDHLKIG 253
           +I                  ARN +  E   +KIG
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 180

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 33/139 (23%)

Query: 142 QGVFGESQTAKWRGTWVVKTV-IKSHIYHPVKMVLSAKDNCK-LRE------LRHPNILQ 193
            G FG  +   +R       V IK      +K      D  + +RE      L +P I++
Sbjct: 20  CGNFGSVRQGVYRMRKKQIDVAIKV-----LKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 194 FLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI-------------- 238
            +G +   E ++L+ E    G L   L  K+  + +         +              
Sbjct: 75  LIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133

Query: 239 ----ARNLLQDEGDHLKIG 253
               ARN+L     + KI 
Sbjct: 134 RDLAARNVLLVNRHYAKIS 152

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 39.9 bits (94), Expect = 9e-04
 Identities = 9/32 (28%), Positives = 12/32 (37%)

Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           CP  L  L++ C       RP F  V   +  
Sbjct: 238 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 44/179 (24%)

Query: 110 HDQPLTVRNE--KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHI 167
           H     +  E  +    V    S L    + ++ +G FG      + GT +     K H 
Sbjct: 1   HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCV----YHGTLLDNDGKKIHC 56

Query: 168 YHPVKMVLSAKDNCK-------LRE------LRHPNILQFLGSIVLGEE-MILITEYLPK 213
              VK +               L E        HPN+L  LG  +  E   +++  Y+  
Sbjct: 57  --AVKSL---NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 111

Query: 214 GNLKGIL-SKKVRLDLPTALRYALDI------------------ARNLLQDEGDHLKIG 253
           G+L+  + ++     +   + + L +                  ARN + DE   +K+ 
Sbjct: 112 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 170

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 35/141 (24%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMV---LSAKDNCK-LRE------LRHPNI 191
            G FGE       G    K   K  I   +K +    + K     L E        HPNI
Sbjct: 55  AGEFGEV----CSGRL--KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------ 238
           ++  G +   + ++++TEY+  G+L   L     +  +   +     I            
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168

Query: 239 ------ARNLLQDEGDHLKIG 253
                 ARN+L +     K+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVS 189

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 55.7 bits (135), Expect = 9e-09
 Identities = 33/155 (21%), Positives = 51/155 (32%), Gaps = 47/155 (30%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK---LRE------LRHPNIL 192
           +G FG+     +       +  K  +   VK +       +    RE      L+H +I+
Sbjct: 25  EGAFGKV----FLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 193 QFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLPTALRYAL 236
           +F G    G+ +I++ EY+  G+L   L                  K  L L   L  A 
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 237 DIA------------------RNLLQDEGDHLKIG 253
            IA                  RN L      +KIG
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG 175

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 50/219 (22%)

Query: 183 LRELRHPNILQFLGSIVLGEEMI------------LITEYLPKGNLKGILSKKVRLDLP- 229
           L +L HP I+++  + +                  +  +   K NLK  ++ +  ++   
Sbjct: 57  LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116

Query: 230 --TALRYALDIA------------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQ 268
               L   L IA                   N+     D +K+G++  V    +      
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176

Query: 269 ENSQRNDNSSIASNV----------LD----DTKKDICSFGYIFYQMLEGKHLQTNNSFD 314
             +     +     V          +       K DI S G I +++L     Q      
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRT 236

Query: 315 FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
              ++++ F P F  ++       ++    +  P +RP 
Sbjct: 237 LTDVRNLKFPPLF--TQKYPCEYVMVQDMLSPSPMERPE 273

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 56.5 bits (136), Expect = 1e-08
 Identities = 41/252 (16%), Positives = 70/252 (27%), Gaps = 37/252 (14%)

Query: 33  QMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
             L E                   S              A+ +     QR   T      
Sbjct: 233 WQLVEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGY 292

Query: 93  HRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVE----QGVFGES 148
             +  RI   +  +    D  +      D  E+      L   +  + +     G FG  
Sbjct: 293 TPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSV 352

Query: 149 QTAKWRGTWVVKTV-IKSHIYHPVKMVLSAKDNCK-LRE------LRHPNILQFLGSIVL 200
           +   +R       V IK      +K      D  + +RE      L +P I++ +G +  
Sbjct: 353 RQGVYRMRKKQIDVAIKV-----LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQ 406

Query: 201 GEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------------ARN 241
            E ++L+ E    G L   L  K+  + +         +                  ARN
Sbjct: 407 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN 466

Query: 242 LLQDEGDHLKIG 253
           +L     + KI 
Sbjct: 467 VLLVNRHYAKIS 478

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 27/134 (20%)

Query: 142 QGVFGESQTAKWRGTWVV--KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
            G FGE   A +     V  KT +K         +  A     ++ L+H  +++    +V
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKT-MKPGSMSVEAFLAEAN---VMKTLQHDKLVKLHA-VV 252

Query: 200 LGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDI------------------A 239
             E + +ITE++ KG+L   L   +  +  LP  + ++  I                  A
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 312

Query: 240 RNLLQDEGDHLKIG 253
            N+L       KI 
Sbjct: 313 ANILVSASLVCKIA 326

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 31/162 (19%), Positives = 51/162 (31%), Gaps = 57/162 (35%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCKLREL------------- 186
           +G FG+          V     K      V  KM+   KD+   ++L             
Sbjct: 91  EGCFGQV----VMAEAVGIDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMI 143

Query: 187 -RHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLP 229
            +H NI+  LG+      + +I EY  KGNL+  L                  + ++   
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203

Query: 230 TALRYALDI------------------ARNLLQDEGDHLKIG 253
             +     +                  ARN+L  E + +KI 
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 245

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 37/239 (15%), Positives = 71/239 (29%), Gaps = 74/239 (30%)

Query: 171 VKMVLSAKDNCK-----LRELRHPNILQFLGSIV----------------LGEEMILITE 209
           +K V    +  +     L +L H NI+ + G                     + + +  E
Sbjct: 41  IKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQME 100

Query: 210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDH 249
           +  KG L+  + K+   +LD   AL     I +                  N+   +   
Sbjct: 101 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ 160

Query: 250 LKIGEY-WVQMFYEQIHPNQENSQRNDNSSIASNV----------LD----DTKKDICSF 294
           +KIG++  V                 ++     +           +       + D+ + 
Sbjct: 161 VKIGDFGLVTSL-------------KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 207

Query: 295 GYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
           G I  ++L         S  F  L+       F       + K L+ +  +K P  RP 
Sbjct: 208 GLILAELLHVCDTAFETSKFFTDLRDGIISDIF-----DKKEKTLLQKLLSKKPEDRPN 261

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 1e-08
 Identities = 57/377 (15%), Positives = 113/377 (29%), Gaps = 114/377 (30%)

Query: 36  REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHR- 94
           R+    + Q + K           +   ++  L+ +  L L+ R    P  +  + G   
Sbjct: 116 RDRLYNDNQVFAKY----------NVSRLQPYLKLRQAL-LELR----PAKNVLIDGVLG 160

Query: 95  --------DICRILEVNGGKDF-IHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVF 145
                   D+C   +V    DF I    L ++N      V   +  L  L   +      
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIF--WLNLKNCNSPETV---LEMLQKLLYQIDPNWTS 215

Query: 146 GESQTA--KWRGTWV---VKTVIKSHIYHPVKMVLSAKDN-------------CKLREL- 186
               ++  K R   +   ++ ++KS  Y    +VL    N             CK+  L 
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---LNVQNAKAWNAFNLSCKI--LL 270

Query: 187 --RHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVRL---DLPTA------LRY 234
             R   +  FL +       +   +  L    +K +L K +     DLP         R 
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 235 ALDIARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENS--------QR---------NDNS 277
           ++ IA   ++D        + W  +  +++    E+S         R           ++
Sbjct: 331 SI-IAE-SIRDGLATW---DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 278 SIASNVL---------DDT-------------KKDICSFGYIFYQMLEGKHLQTNNSFDF 315
            I + +L          D              +K           +     ++  N +  
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA- 444

Query: 316 MHLKSVNFEPKFQISRC 332
           +H   V+    + I + 
Sbjct: 445 LHRSIVD---HYNIPKT 458

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 2e-07
 Identities = 67/459 (14%), Positives = 127/459 (27%), Gaps = 118/459 (25%)

Query: 5   AAASGDFDMQVIGNF----LSFASRGDRVG----LNQMLREGTSPNVQDYDKRTALHLAA 56
                 + +Q   +F    L+  +          L ++L +         D  + + L  
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 57  SEGHAPIVELLL--QYK-ANLNLKDRWQRTPLTDARLYGHRDI-CRILEVNGGKDFIHDQ 112
               A +  LL    Y+   L L +        +A+ +   ++ C+IL            
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQ------NAKAWNAFNLSCKIL------------ 269

Query: 113 PLTVRNEKDSNEVNFDISELNTLHSSMVE-QGVFGESQT----AKWRGTWV------VKT 161
            LT R +    +V   +S   T H S+          +      K+           V T
Sbjct: 270 -LTTRFK----QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 162 VIKSHIYHPVKMVLSA---KDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLK 217
                  +P ++ + A   +D        +H N  +    I    E  L    L     +
Sbjct: 325 T------NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII----ESSL--NVLEPAEYR 372

Query: 218 ------GILSKKVRLDLPTAL--RYALDIARNLLQDEGDHL----------KIGEYWVQM 259
                  +        +PT L      D+ ++ +    + L          K     +  
Sbjct: 373 KMFDRLSVFPPSA--HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430

Query: 260 FYEQIHPNQENSQ---RN--DNSSIASNVLDDTKKDICSFGYIF----YQMLEGKHLQTN 310
            Y ++    EN     R+  D+ +I      D         Y +    + +   +H +  
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490

Query: 311 NSF-------DFMHLKSVNFE-PKFQISRCPNRLKQLI---AQCTNKDPSKRPTFAAVII 359
             F        F+  K  +            N L+QL        + D    P +  ++ 
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDND----PKYERLVN 546

Query: 360 TLEEV------------SACLGRSALCPTGGGSKGHAFK 386
            + +                L R AL          A K
Sbjct: 547 AILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 52/330 (15%), Positives = 109/330 (33%), Gaps = 94/330 (28%)

Query: 91  YGHRDICRILEVNGGKDF----IHDQPLTVRNEKD-------SNEVN-----FDISELNT 134
           Y ++DI  + E     +F    + D P ++ ++++        + V+     F    L +
Sbjct: 16  YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT--LLS 73

Query: 135 LHSSMVEQGVFGESQT------AKWRG------------------TW-VVKTVIKSHIYH 169
               MV++ V    +       +  +                    +   +   K ++  
Sbjct: 74  KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133

Query: 170 PVKMVLSAKDNCKLRELR-HPNILQF--LGS--IVLGEEMIL---ITEYLPKG----NLK 217
             +  L  +    L ELR   N+L    LGS    +  ++ L   +   +       NLK
Sbjct: 134 L-QPYLKLRQ--ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 218 GILSKKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQ-----MFYEQIHPNQENSQ 272
              S +  L++   L Y +D       D   ++K+  + +Q     +   + +       
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE------ 244

Query: 273 RNDNSSIASNVLDD--TKKDICSFGYIFYQMLEGKHLQTNNS--FDFM------HLKSVN 322
              N  +   VL +    K   +F  +  ++L    L T      DF+      H+   +
Sbjct: 245 ---NCLL---VLLNVQNAKAWNAFN-LSCKIL----LTTRFKQVTDFLSAATTTHISLDH 293

Query: 323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRP 352
                     P+ +K L+ +  +  P   P
Sbjct: 294 HSMTLT----PDEVKSLLLKYLDCRPQDLP 319

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 55/377 (14%), Positives = 112/377 (29%), Gaps = 94/377 (24%)

Query: 123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
           + ++F+  E    +  ++   VF ++          V       +    K +LS ++   
Sbjct: 5   HHMDFETGEHQYQYKDILS--VFEDA---------FVDNFDCKDVQDMPKSILSKEEIDH 53

Query: 183 LRELRHP-NILQFLGSIVL--GEEMI--LITEYLPKGNLKGILSK-KVRLDLPTALRYAL 236
           +   +   +    L   +L   EEM+   + E L   N K ++S  K     P+ +    
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI-NYKFLMSPIKTEQRQPSMMTRMY 112

Query: 237 DIARNLLQDEGDHLKIGEYWVQMF--YEQIHPNQENSQRNDN-----------SSIASNV 283
              R+ L ++       +Y V     Y ++       +   N           + +A +V
Sbjct: 113 IEQRDRLYNDNQ--VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 284 LDDTKKDICSFGYIFY-------------QMLEGKHLQTNNSFDFMHLKSVNFEPKFQIS 330
               K        IF+             +ML+   L      ++      +   K +I 
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ--KLLYQIDPNWTSRSDHSSNIKLRIH 228

Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCPTGGGSKGH--AFKVP 388
                L++L+          +P    +++ L  V               +     AF   
Sbjct: 229 SIQAELRRLLKS--------KPYENCLLV-LLNVQ--------------NAKAWNAFN-- 263

Query: 389 RVTIYSIRIRLKDLTVVTTRMGHVQDYFPNPFRF-LNSSHCAYSFCPTRTAD-----STI 442
                   +  K   ++TTR   V D+        ++  H + +  P             
Sbjct: 264 --------LSCK--ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 443 IVNSTPE---TTVPLLI 456
                P    TT P  +
Sbjct: 314 RPQDLPREVLTTNPRRL 330

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 46/154 (29%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK---LRE------LRHPNIL 192
           +G FG+     +          +  +   VK +  A ++ +    RE      L+H +I+
Sbjct: 51  EGAFGKV----FLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 193 QFLGSIVLGEEMILITEYLPKGNLKGIL---------------SKKVRLDLPTALRYALD 237
           +F G    G  ++++ EY+  G+L   L                    L L   L  A  
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 238 IA------------------RNLLQDEGDHLKIG 253
           +A                  RN L  +G  +KIG
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG 200

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 31/162 (19%), Positives = 51/162 (31%), Gaps = 57/162 (35%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCKLREL------------- 186
           +G FG+          V     K      V  KM+   KD+   ++L             
Sbjct: 45  EGAFGQV----VMAEAVGIDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMI 97

Query: 187 -RHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLP 229
            +H NI+  LG+      + +I EY  KGNL+  L                  + ++   
Sbjct: 98  GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157

Query: 230 TALRYALDI------------------ARNLLQDEGDHLKIG 253
             +     +                  ARN+L  E + +KI 
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 54/213 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRY------AL 236
            R L H +++ F G     + + ++ E   + +L  +  ++  L  P A  Y        
Sbjct: 69  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 128

Query: 237 D-------IAR-----NLLQDEGDHLKIGEY----WVQMFYEQIH-----PNQENSQRND 275
                   I R     NL  +E   +KIG++     V+   E+       PN        
Sbjct: 129 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY------- 181

Query: 276 NSSIASNVLD----DTKKDICSFGYIFYQMLEGK-HLQTNNSFD-FMHLKSVNFEPKFQI 329
              IA  VL       + D+ S G I Y +L GK   +T+   + ++ +K   +      
Sbjct: 182 ---IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY------ 232

Query: 330 SRCPNRL----KQLIAQCTNKDPSKRPTFAAVI 358
              P  +      LI +    DP+ RPT   ++
Sbjct: 233 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 264

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 42/145 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-------------LRH 188
           +G FG      + GT +     K H    VK +        + E               H
Sbjct: 99  RGHFGCV----YHGTLLDNDGKKIHC--AVKSL---NRITDIGEVSQFLTEGIIMKDFSH 149

Query: 189 PNILQFLGSIVLGEE-MILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI-------- 238
           PN+L  LG  +  E   +++  Y+  G+L+  + ++     +   + + L +        
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 209

Query: 239 ----------ARNLLQDEGDHLKIG 253
                     ARN + DE   +K+ 
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVA 234

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 33/153 (21%), Positives = 49/153 (32%), Gaps = 48/153 (31%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-------------LRH 188
            G FGE     + G         S +   VK +    + C  ++               H
Sbjct: 40  HGAFGEV----YEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKFNH 92

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL-------SKKVRLDLPTALRYALDIA-- 239
            NI++ +G  +      ++ E +  G+LK  L       S+   L +   L  A DIA  
Sbjct: 93  QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152

Query: 240 ----------------RN-LLQDEGDHL--KIG 253
                           RN LL   G     KIG
Sbjct: 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 47/220 (21%), Positives = 80/220 (36%), Gaps = 54/220 (24%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA----------- 231
           + +  HPNI+ +  S V+ +E+ L+ + L  G++  I+   V      +           
Sbjct: 67  MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126

Query: 232 LRYAL--------------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
           LR  L              D+ A N+L  E   ++I ++ V  F         N  R   
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR--K 184

Query: 277 SSI------ASNVLD-----DTKKDICSFGYIFYQMLEGK------H------LQTNNSF 313
           + +      A  V++     D K DI SFG    ++  G              L   N  
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244

Query: 314 DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
             +     + E   +  +     +++I+ C  KDP KRPT
Sbjct: 245 PSLETGVQDKEMLKKYGK---SFRKMISLCLQKDPEKRPT 281

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 54.2 bits (131), Expect = 3e-08
 Identities = 34/160 (21%), Positives = 48/160 (30%), Gaps = 58/160 (36%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-------LREL-------R 187
           +G FG+   A+ +   +            +K +   K+            EL        
Sbjct: 35  EGNFGQVLKARIKKDGLRMDAA-------IKRM---KEYASKDDHRDFAGELEVLCKLGH 84

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLPTA 231
           HPNI+  LG+      + L  EY P GNL   L                S    L     
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144

Query: 232 LRYALDI------------------ARNLLQDEGDHLKIG 253
           L +A D+                  ARN+L  E    KI 
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 54/213 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-- 240
            R L H +++ F G     + + ++ E   + +L  +  ++  L  P A  Y   I    
Sbjct: 95  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154

Query: 241 ----------------NLLQDEGDHLKIGEY----WVQMFYEQIH-----PNQENSQRND 275
                           NL  +E   +KIG++     V+   E+       PN        
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY------- 207

Query: 276 NSSIASNVLD----DTKKDICSFGYIFYQMLEGK-HLQTNNSFD-FMHLKSVNFEPKFQI 329
              IA  VL       + D+ S G I Y +L GK   +T+   + ++ +K   +      
Sbjct: 208 ---IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY------ 258

Query: 330 SRCPNRL----KQLIAQCTNKDPSKRPTFAAVI 358
              P  +      LI +    DP+ RPT   ++
Sbjct: 259 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 290

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 47/209 (22%), Positives = 71/209 (33%), Gaps = 48/209 (22%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-- 240
              LRHPNIL+  G       + LI EY P G +   L K  + D      Y  ++A   
Sbjct: 63  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122

Query: 241 ----------------NLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNSS----- 278
                           NLL      LKI ++ W              S    +S      
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--------------SVHAPSSRRTDLC 168

Query: 279 ---------IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI 329
                    +    + D K D+ S G + Y+ L GK     N++   + +    E  F  
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228

Query: 330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                  + LI++    +PS+RP    V+
Sbjct: 229 FVTEG-ARDLISRLLKHNPSQRPMLREVL 256

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 54/159 (33%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-------LRE------LRH 188
           +  FG+     ++G        +      +K +   KD  +         E      L+H
Sbjct: 19  EDRFGKV----YKGHLFGPAPGEQTQAVAIKTL---KDKAEGPLREEFRHEAMLRARLQH 71

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLPTAL 232
           PN++  LG +   + + +I  Y   G+L   L                + K  L+ P  +
Sbjct: 72  PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131

Query: 233 RYALDIA------------------RNLLQDEGDHLKIG 253
                IA                  RN+L  +  ++KI 
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 170

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 57/162 (35%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCKLREL------------- 186
           +G FG+          +     K +    V  KM+   K +   ++L             
Sbjct: 79  EGAFGQV----VLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLISEMEMMKMI 131

Query: 187 -RHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLP 229
            +H NI+  LG+      + +I EY  KGNL+  L                + + +L   
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191

Query: 230 TALRYALDI------------------ARNLLQDEGDHLKIG 253
             +  A  +                  ARN+L  E + +KI 
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 233

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 31/167 (18%), Positives = 54/167 (32%), Gaps = 62/167 (37%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-------------LRH 188
           +G FG+      + T         +    VKM+   K+N    E             + H
Sbjct: 33  EGEFGKV----VKATAFHLKGRAGYTTVAVKML---KENASPSELRDLLSEFNVLKQVNH 85

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL------------------------SKKV 224
           P++++  G+      ++LI EY   G+L+G L                          + 
Sbjct: 86  PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145

Query: 225 RLDLPTALRYALDIA------------------RNLLQDEGDHLKIG 253
            L +   + +A  I+                  RN+L  EG  +KI 
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 37/164 (22%), Positives = 53/164 (32%), Gaps = 61/164 (37%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCKLREL------------- 186
            G FG+        T     +IKS     V  KM+   K +  L E              
Sbjct: 33  AGAFGKV----VEATA--YGLIKSDAAMTVAVKML---KPSAHLTEREALMSELKVLSYL 83

Query: 187 -RHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL------------------SKKVRLD 227
             H NI+  LG+  +G   ++ITEY   G+L   L                    ++ LD
Sbjct: 84  GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 228 LPTALRYALDIA------------------RNLLQDEGDHLKIG 253
           L   L ++  +A                  RN+L   G   KI 
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 187

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 53.2 bits (128), Expect = 7e-08
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 27/119 (22%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE-------------LRH 188
            G FGE     + G         S +   VK +    + C  ++               H
Sbjct: 81  HGAFGEV----YEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFLMEALIISKFNH 133

Query: 189 PNILQFLGSIVLGEEMILITEYLPKGNLKGIL-------SKKVRLDLPTALRYALDIAR 240
            NI++ +G  +      ++ E +  G+LK  L       S+   L +   L  A DIA 
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 53.0 bits (127), Expect = 9e-08
 Identities = 38/274 (13%), Positives = 79/274 (28%), Gaps = 40/274 (14%)

Query: 118 NEKDSNEVNF--DISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVL 175
            EK   EV     +     +           E    +    W+        +  P  M  
Sbjct: 48  REKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDA 107

Query: 176 SAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP---TAL 232
            +    ++      N +  L        + +  +   K NLK  ++++  L+       L
Sbjct: 108 PSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167

Query: 233 RYALDIA------------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQR 273
              + IA                   N+     D +K+G++  V    +        +  
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227

Query: 274 NDNSSIASNV----------LD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLK 319
              ++    V          +       K DI S G I +++L     Q         ++
Sbjct: 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR 287

Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPT 353
           ++ F   F   + P     ++    +  P++RP 
Sbjct: 288 NLKFPLLFT-QKYPQ-EHMMVQDMLSPSPTERPE 319

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 53/156 (33%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK--------LRE------LR 187
           +G FG             +      +   VKM+   K +          LRE        
Sbjct: 33  KGEFGSV----REAQLKQEDGSFVKV--AVKML---KADIIASSDIEEFLREAACMKEFD 83

Query: 188 HPNILQFLG------SIVLGEEMILITEYLPKGNLKGIL------SKKVRLDLPTALRYA 235
           HP++ + +G      +       ++I  ++  G+L   L           L L T +R+ 
Sbjct: 84  HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143

Query: 236 LDI------------------ARNLLQDEGDHLKIG 253
           +DI                  ARN +  E   + + 
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 31/158 (19%), Positives = 46/158 (29%), Gaps = 53/158 (33%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
            G FG+        T        + +   VKM+   K      E               +
Sbjct: 56  AGAFGKV----VEATAFGLGKEDAVLKVAVKML---KSTAHADEKEALMSELKIMSHLGQ 108

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------------SKKVRLDLPTALR 233
           H NI+  LG+   G  +++ITEY   G+L   L                         L 
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168

Query: 234 YALDI------------------ARNLLQDEGDHLKIG 253
           ++  +                  ARN+L   G   KIG
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 48/153 (31%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMV----LSAKDNCK-LRE------LRHPN 190
           +G FG        G    +      +   VK +     S ++  + L E        HPN
Sbjct: 44  EGEFGSV----MEGNLKQEDGTSLKV--AVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 191 ILQFLG------SIVLGEEMILITEYLPKGNLKGIL------SKKVRLDLPTALRYALDI 238
           +++ LG      S  + + M+ I  ++  G+L   L      +    + L T L++ +DI
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMV-ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156

Query: 239 ------------------ARNLLQDEGDHLKIG 253
                             ARN +  +   + + 
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA 189

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 24/137 (17%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
            G FG+        T    +     I   VKM+   K+     E                
Sbjct: 55  SGAFGKV----MNATAYGISKTGVSIQVAVKML---KEKADSSEREALMSELKMMTQLGS 107

Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEG 247
           H NI+  LG+  L   + LI EY   G+L   L +  R           +  R   +++ 
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL-RSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 248 DHLKIGEYWVQMFYEQI 264
           + L   +  +   Y Q+
Sbjct: 167 NVLTFEDL-LCFAY-QV 181

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 64/213 (30%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP---TALRYAL--- 236
           L +   P + ++ GS +   ++ +I EYL  G+   +L +   LD     T LR  L   
Sbjct: 74  LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGL 132

Query: 237 -----------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSI--- 279
                      DI A N+L  E   +K+ ++ V  Q+            +R  N+ +   
Sbjct: 133 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-------TDTQIKR--NTFVGTP 183

Query: 280 ---ASNVLD----DTKKDICSFGYIFYQMLEGK--HLQTNNSFDFMH-LKSVNFEPKFQI 329
              A  V+     D+K DI S G    ++  G+  H +       +H +K +     F I
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE-------LHPMKVL-----FLI 231

Query: 330 SRCP---------NRLKQLIAQCTNKDPSKRPT 353
            +             LK+ +  C NK+PS RPT
Sbjct: 232 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPT 264

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 49.5 bits (119), Expect = 7e-07
 Identities = 45/215 (20%), Positives = 70/215 (32%), Gaps = 55/215 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-- 240
              LRHPNIL+        + + L+ E+ P+G L   L K  R D   +  +  ++A   
Sbjct: 68  QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127

Query: 241 ----------------NLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNSS----- 278
                           NLL      LKI ++ W              S    +       
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGW--------------SVHAPSLRRRTMC 173

Query: 279 ---------IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI 329
                    +      D K D+   G + Y+ L G     + S    H + VN + KF  
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233

Query: 330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
                  K LI++     P +R       + L+ V
Sbjct: 234 FLSDG-SKDLISKLLRYHPPQR-------LPLKGV 260

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 49.6 bits (119), Expect = 9e-07
 Identities = 31/163 (19%), Positives = 49/163 (30%), Gaps = 60/163 (36%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCKLREL------------- 186
           +G FG+              + K+     V  KM+   K+     E              
Sbjct: 37  RGAFGQV----IEADA--FGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHI 87

Query: 187 -RHPNILQFLG-SIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDL 228
             H N++  LG     G  +++I E+   GNL   L                  K  L L
Sbjct: 88  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147

Query: 229 PTALRYALDI------------------ARNLLQDEGDHLKIG 253
              + Y+  +                  ARN+L  E + +KI 
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190

>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A* Length = 534

 Score = 49.0 bits (116), Expect = 2e-06
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 20  LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH 60
           L + S    + L + + +  SP   +    T ++   S G 
Sbjct: 486 LDYESLQQELALKETVWKKVSPESNEDISTTVVYRMESLGE 526

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 40/202 (19%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP---TALRYAL--- 236
           +RE ++PNI+ +L S ++G+E+ ++ EYL  G+L  ++++   +D        R  L   
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQAL 129

Query: 237 -----------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI----- 279
                      DI + N+L      +K+ ++       QI    E S+R  ++ +     
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC---AQI--TPEQSKR--STMVGTPYW 182

Query: 280 -ASNVLD----DTKKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNFEPKFQ-ISR 331
            A  V+       K DI S G +  +M+EG+  +L   N    ++L + N  P+ Q   +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNPEK 241

Query: 332 CPNRLKQLIAQCTNKDPSKRPT 353
                +  + +C   D  KR +
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGS 263

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 32/169 (18%), Positives = 50/169 (29%), Gaps = 66/169 (39%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPV--KMVLSAKDNCK-------LRE------L 186
           +G FG      ++       ++    +  V  KM+   K+           RE       
Sbjct: 57  EGAFGRV----FQARA--PGLLPYEPFTMVAVKML---KEEASADMQADFQREAALMAEF 107

Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL------------------------SK 222
            +PNI++ LG   +G+ M L+ EY+  G+L   L                          
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167

Query: 223 KVRLDLPTALRYALDIA------------------RNLLQDEGDHLKIG 253
              L     L  A  +A                  RN L  E   +KI 
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA 216

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 47.1 bits (113), Expect = 5e-06
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 47/210 (22%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRY------A 235
             +L+HP+IL+          + L+ E    G + + + ++        A  +       
Sbjct: 65  HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124

Query: 236 LD-------IAR-----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRN------DNS 277
           +        + R     NLL     ++KI +     F         + +        +  
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIAD-----FGLATQLKMPHEKHYTLCGTPNYI 179

Query: 278 S--IASNVLDDTKKDICSFGYIFYQMLEGKHL--QTNNSFD-FMHLKSVNFEPKFQISRC 332
           S  IA+      + D+ S G +FY +L G+     T+   +    +   ++         
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGR-PPFDTDTVKNTLNKVVLADY-------EM 231

Query: 333 PNRL----KQLIAQCTNKDPSKRPTFAAVI 358
           P+ L    K LI Q   ++P+ R + ++V+
Sbjct: 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 40/202 (19%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP---TALRYAL--- 236
           +R+ +H N+++   S ++GEE+ ++ E+L  G L  I+  +VRL+     T     L   
Sbjct: 96  MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-SQVRLNEEQIATVCEAVLQAL 154

Query: 237 -----------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI----- 279
                      DI + ++L      +K+ ++       QI  +++  +R   S +     
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC---AQI--SKDVPKR--KSLVGTPYW 207

Query: 280 -ASNVLD----DTKKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNFEPKFQ-ISR 331
            A  V+      T+ DI S G +  +M++G+  +    +    M     +  PK +   +
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRLRDSPPPKLKNSHK 266

Query: 332 CPNRLKQLIAQCTNKDPSKRPT 353
               L+  + +   +DP +R T
Sbjct: 267 VSPVLRDFLERMLVRDPQERAT 288

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 29/245 (11%), Positives = 65/245 (26%), Gaps = 84/245 (34%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-- 240
           + ++++   L   G I   +E+ +I EY+   ++         LD        + + +  
Sbjct: 97  ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156

Query: 241 -------------------------NLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRN 274
                                    N+L D+   +K+ ++                S+  
Sbjct: 157 IKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGE--------------SEYM 202

Query: 275 DNSS---------------IASNVLDDTKK-DICSFGYIFYQMLEGK------------- 305
            +                  ++    +  K DI S G   Y M                 
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262

Query: 306 ------HLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVII 359
                 +++     +       N +     +   N     +     K+P++R       I
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER-------I 315

Query: 360 TLEEV 364
           T E+ 
Sbjct: 316 TSEDA 320

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLK----GILSKKVRLDLPTALRYALDI 238
           L   RHP+++  +G      EMILI +Y+  GNLK    G     + +     L   +  
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148

Query: 239 ARNL 242
           AR L
Sbjct: 149 ARGL 152

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 45/208 (21%), Positives = 67/208 (32%), Gaps = 53/208 (25%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD---LPTALRYAL--- 236
           L++LRHPN +Q+ G  +      L+ EY        +   K  L    +      AL   
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167

Query: 237 -----------DI-ARNLLQDEGDHLKIGE-----------------YWVQMFYEQIHPN 267
                      D+ A N+L  E   +K+G+                 YW  M  E I   
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYW--MAPEVILAM 225

Query: 268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNFEP 325
            E                D K D+ S G    ++ E K       N+   ++  + N  P
Sbjct: 226 DEGQY-------------DGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESP 271

Query: 326 KFQISRCPNRLKQLIAQCTNKDPSKRPT 353
             Q        +  +  C  K P  RPT
Sbjct: 272 ALQSGHWSEYFRNFVDSCLQKIPQDRPT 299

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 30/177 (16%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELR-------------- 187
           +G FG+                 +     VKM+   K+     E R              
Sbjct: 32  RGAFGQV----IEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGH 84

Query: 188 HPNILQFLG-SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDE 246
           H N++  LG     G  +++I E+   GNL   L  K R +            +      
Sbjct: 85  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVPYKTKGARFRQGKDYVG 143

Query: 247 GDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDD-------TKKDICSFGY 296
              + +      +   Q   +    +    S +      +       T + +  + +
Sbjct: 144 AIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSF 200

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 62/214 (28%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLD---LPTALRYAL-- 236
           +++   P+++++ GS     ++ ++ EY   G++  I+  +   L    + T L+  L  
Sbjct: 78  MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137

Query: 237 ------------DI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
                       DI A N+L +   H K+ ++ V     Q+      ++R  N+ I    
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA---GQL--TDTMAKR--NTVIGTPF 190

Query: 280 --ASNVLD----DTKKDICSFGYIFYQMLEGK--HLQTNNSFDFMH-LKSVNFEPKFQIS 330
             A  V+     +   DI S G    +M EGK  +         +H ++++     F I 
Sbjct: 191 WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD-------IHPMRAI-----FMIP 238

Query: 331 RCP-----------NRLKQLIAQCTNKDPSKRPT 353
             P           +     + QC  K P +R T
Sbjct: 239 TNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 43.8 bits (103), Expect = 7e-05
 Identities = 20/221 (9%), Positives = 55/221 (24%), Gaps = 44/221 (19%)

Query: 182 KLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR-----LDLPTALRYAL 236
           +L+       ++F  + +     +L+ E    G L   ++         +     + +A+
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179

Query: 237 DIAR------------------NLLQDEGDHLKIGEYWVQ-----------MFYEQIHPN 267
            +                    N +   G   +  E  +            +  +     
Sbjct: 180 RMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG 239

Query: 268 QENSQRNDNSS-IASNVLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN 322
              + + + S      +L     + + D        Y ML G +++  N       +   
Sbjct: 240 TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEG-L 298

Query: 323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
           F          +   +      N           ++    +
Sbjct: 299 FRRLPH----LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 28/248 (11%), Positives = 61/248 (24%), Gaps = 77/248 (31%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLP-----TALRYAL- 236
            +   HPNI+ +  + +   E+ ++T ++  G+ K ++       +        L+  L 
Sbjct: 80  SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK 139

Query: 237 -------------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSS-- 278
                         + A ++L      + +        M          +     +    
Sbjct: 140 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199

Query: 279 -------IASNVLD-DTKKDICSFGYIFYQMLEGK---------------------HLQT 309
                  +  N+   D K DI S G    ++  G                       L  
Sbjct: 200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259

Query: 310 NNSFDFMHLKSVNFEPKFQISRCPNR------------------------LKQLIAQCTN 345
            ++     L               +                             + QC  
Sbjct: 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQ 319

Query: 346 KDPSKRPT 353
           ++P  RP+
Sbjct: 320 RNPDARPS 327

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 18/88 (20%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRY------AL 236
            + L H N+++F G    G    L  EY   G L   +   + +  P A R+       +
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118

Query: 237 D------IA-R-----NLLQDEGDHLKI 252
                  I  R     NLL DE D+LKI
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKI 146

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 18/88 (20%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRY------AL 236
            + L H N+++F G    G    L  EY   G L   +   + +  P A R+       +
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118

Query: 237 D------IA-R-----NLLQDEGDHLKI 252
                  I  R     NLL DE D+LKI
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKI 146

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 50/250 (20%), Positives = 88/250 (35%), Gaps = 49/250 (19%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCK-------LRELRHPNI 191
            G +GE    + + T     +K + K+         +S   N K       L+ L HPNI
Sbjct: 47  SGAYGEVLLCRDKVTHVERAIKIIRKTS--------VSTSSNSKLLEEVAVLKLLDHPNI 98

Query: 192 LQFLGSIVLGEEMILITEYLPKGNL------KGILS----KKVRLDLPTALRY--ALDIA 239
           ++            L+ E    G L      +   +      +   + + + Y    +I 
Sbjct: 99  MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158

Query: 240 -R-----NLL---QDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS-IASNVLD---D 286
            R     NLL   +++   +KI ++ +   +E     ++  +R   +  IA  VL    D
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFE---NQKKMKERLGTAYYIAPEVLRKKYD 215

Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPN---RLKQLIAQC 343
            K D+ S G I + +L G       +   +  K    +  F      N     K LI Q 
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQM 275

Query: 344 TNKDPSKRPT 353
              D  +R +
Sbjct: 276 LQFDSQRRIS 285

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 286 DTKKDICSFGYIFYQML-EGKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQ 342
               DI S G +FY ++ EG H   ++      + L + + +            ++LI +
Sbjct: 207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEK 266

Query: 343 CTNKDPSKRPTFAAV 357
               DP KRP+   V
Sbjct: 267 MIAMDPQKRPSAKHV 281

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
            + L+H NI+Q+LGS      + +  E +P G+L  +L  K
Sbjct: 73  HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK 113

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL---SKKVRLDLPTALRYALDIA 239
           + + +H N+++ LG    G+++ L+  Y+P G+L   L        L      + A   A
Sbjct: 84  MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143

Query: 240 RNLL 243
             + 
Sbjct: 144 NGIN 147

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 44/210 (20%), Positives = 69/210 (32%), Gaps = 50/210 (23%)

Query: 185 ELRHPNILQFLGSIVL--GEE---MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA 239
           +L H NI+      ++   EE     L+ EY+    L   +     L + TA+ +   I 
Sbjct: 67  QLSHQNIVS-----MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121

Query: 240 R------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS---------- 271
                              N+L D    LKI ++ +     +    Q N           
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181

Query: 272 -QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK---HLQTNNSFDFMHLKS-VNFEPK 326
            Q       A     D   DI S G + Y+ML G+   + +T  S    H++  V     
Sbjct: 182 EQ-------AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTT 234

Query: 327 FQISRCPNRLKQLIAQCTNKDPSKRPTFAA 356
                 P  L  +I + T KD + R     
Sbjct: 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQ 264

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 23/221 (10%), Positives = 49/221 (22%), Gaps = 49/221 (22%)

Query: 174 VLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALR 233
           ++      K+  +R      ++ S       +          L    S    L     L+
Sbjct: 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQ 210

Query: 234 YALDIAR------------------NLLQDEGDHLKI---------GEYWVQM---FY-- 261
             L + R                  +++ D+   + +         G   V      +  
Sbjct: 211 LTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEP 270

Query: 262 -EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK---HLQTNNSFDFMH 317
            E        S   D  ++          D  + G + Y +                 + 
Sbjct: 271 PELEARRATISYHRDRRTLM-----TFSFDAWALGLVIYWIWCADLPITKDAA-----LG 320

Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                F     I   P  ++ L+          R      +
Sbjct: 321 GSEWIFRSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAM 358

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 43/225 (19%), Positives = 80/225 (35%), Gaps = 67/225 (29%)

Query: 183 LRELRHPNILQFLGSIVLGEE--MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA- 239
           L++L HPN+++ +  +    E  + ++ E + +G +  + + K  L    A  Y  D+  
Sbjct: 90  LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIK 148

Query: 240 ------------R-----NLLQDEGDHLKIGEYWVQMFYEQIH---------PNQENSQR 273
                       R     NLL  E  H+KI ++ V   ++            P       
Sbjct: 149 GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF----- 203

Query: 274 NDNSSIASNVLDDTKK-------DICSFGYIFYQMLEGK------HLQTNNSFDFMHLKS 320
                +A   L +T+K       D+ + G   Y  + G+       +        +H K 
Sbjct: 204 -----MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC------LHSKI 252

Query: 321 VNFEPKF-QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            +   +F         LK LI +  +K+P  R       I + E+
Sbjct: 253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESR-------IVVPEI 290

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 49/246 (19%), Positives = 88/246 (35%), Gaps = 40/246 (16%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FGE    K + T     VK + K  +          ++   L++L HPNI++     
Sbjct: 36  KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95

Query: 199 VLGEEMILITEYLPKGNL------KGILS----KKVRLDLPTALRY--ALDIA------R 240
                  L+ E    G L      +   S     ++   + + + Y     I        
Sbjct: 96  EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPE 155

Query: 241 NLL---QDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS-IASNVLD---DTKKDICS 293
           NLL   + +  +++I ++ +   +E    +++   +   +  IA  VL    D K D+ S
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 212

Query: 294 FGYIFYQMLEGK---HLQTNNS-FDFMHLKSVNFEPKF--QISRCPNRLKQLIAQCTNKD 347
            G I Y +L G    +          +      FE     ++S      K LI +     
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS---ESAKDLIRKMLTYV 269

Query: 348 PSKRPT 353
           PS R +
Sbjct: 270 PSMRIS 275

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 61/216 (28%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLD---LPTALRYAL-- 236
           L    HP I++ LG+     ++ ++ E+ P G +  I+      L    +    R  L  
Sbjct: 70  LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129

Query: 237 ------------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSI-- 279
                       D+ A N+L      +++ ++ V  +         +   +R  +S I  
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN-------LKTLQKR--DSFIGT 180

Query: 280 ----ASNVLD---------DTKKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNFE 324
               A  V+          D K DI S G    +M + +  H +       ++   V  +
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE-------LNPMRVLLK 233

Query: 325 ------PKFQI-SRCPNRLKQLIAQCTNKDPSKRPT 353
                 P     S+     +  +    +K+P  RP+
Sbjct: 234 IAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS 269

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 12/79 (15%), Positives = 21/79 (26%), Gaps = 14/79 (17%)

Query: 286 DTKKDICSFGYIFYQMLEGK-----------HLQTNNSFDFMHLKSVNFEPKFQISRCPN 334
               +    G   Y++                     S       S+ F     +   P+
Sbjct: 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPL---PD 327

Query: 335 RLKQLIAQCTNKDPSKRPT 353
            +K LI +  N D  +R  
Sbjct: 328 FVKTLIGRFLNFDRRRRLL 346

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 42/284 (14%), Positives = 74/284 (26%), Gaps = 76/284 (26%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           QG        + + T   + +K         PV + +   +   L++L H NI++     
Sbjct: 19  QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV--LKKLNHKNIVKLFAIE 76

Query: 199 --VLGEEMILITEYLPKGNLKGILSKKVRLDL---PTALRYALDIAR------------- 240
                   +LI E+ P G+L  +L +            L    D+               
Sbjct: 77  EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136

Query: 241 -----NLL----QDEGDHLKIG------EYWVQMFYEQ-------IHPNQENSQRNDNSS 278
                N++    +D     K+       E      +         +HP  +  +R     
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHP--DMYERAVLRK 194

Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGK----HLQTNNSFDFMHLKSVNFEPKFQISR--- 331
                      D+ S G  FY    G       +       +  K +  +P   IS    
Sbjct: 195 DHQK-KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253

Query: 332 ---------------------CPNRLKQLIAQCTNKDPSKRPTF 354
                                    L  ++A     D  K   F
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	464
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.9
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.87
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.86
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.85
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.85
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.81
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.81
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.8
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.8
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.8
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.8
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.79
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.79
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.78
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.78
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.78
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.78
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.78
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.77
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.77
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.77
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.77
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.76
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.76
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.76
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.76
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.75
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.75
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.75
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.75
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.75
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.75
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.75
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.74
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.74
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.74
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.74
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.74
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.74
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.74
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.74
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.74
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.74
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.73
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.73
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.73
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.73
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.73
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.72
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.72
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.72
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.72
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.72
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.72
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.71
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.71
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.71
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.71
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.71
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.71
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.71
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.71
2rfa_A	232	Transient receptor potential cation channel subfa	99.7
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.7
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.7
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.7
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.7
2etb_A	256	Transient receptor potential cation channel subfam	99.7
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.7
2etb_A	256	Transient receptor potential cation channel subfam	99.7
2pnn_A	273	Transient receptor potential cation channel subfa	99.7
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.69
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.69
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.69
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.69
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.69
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.69
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.69
2pnn_A	273	Transient receptor potential cation channel subfa	99.68
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.68
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.68
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.68
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.68
2rfa_A	232	Transient receptor potential cation channel subfa	99.68
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.68
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.68
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.68
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.68
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.68
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.68
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.67
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.67
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.67
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.67
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.65
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.65
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.65
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.65
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.64
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.64
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.63
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.63
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.63
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.61
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.6
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.59
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.58
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.56
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.55
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.55
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.54
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.53
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.52
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.48
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.46
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.37
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.34
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.23
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.99
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.31
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.03
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.98
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.95
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.4
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.35
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.25
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.77
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.47
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.23
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	94.63
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.22
3ats_A	357	Putative uncharacterized protein; hypothetical pro	92.45
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	91.23
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.8
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	89.72
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	89.16
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	89.06
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	87.8
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	82.13

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1e-52  Score=400.09  Aligned_cols=233  Identities=20%  Similarity=0.280  Sum_probs=200.3

Q ss_pred             ccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..+|.+.+.||+|+||+||+|++.       +..||||+++..   .....+.|.+| ++|++++|||||+++|+|.+++
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            347888999999999999999873       678999999863   34556789999 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc-------------cCCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          203 EMILITEYLPKGNLKGILSKK-------------VRLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~-------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      .+|||||||++|+|.++|+.+             ..+++.+++.|+.||++                  |||+++++.+|
T Consensus        89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~K  168 (299)
T 4asz_A           89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK  168 (299)
T ss_dssp             SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEE
Confidence            999999999999999999754             36999999999999987                  99999999999


Q ss_pred             EecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCC
Q 039021          252 IGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFE  324 (464)
Q Consensus       252 l~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~  324 (464)
                      |+|||+|+......     ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+ .+....+..+..
T Consensus       169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~  248 (299)
T 4asz_A          169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  248 (299)
T ss_dssp             ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCC
T ss_pred             ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999999765432     22348999999999999999999999999999999998 999999877 444444444444


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +..+ ..+|+++.+||.+||+.||++||||++|...|+.+.+.
T Consensus       249 ~~~p-~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          249 LQRP-RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCC-ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            4444 67999999999999999999999999999999887543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=4.8e-52  Score=400.85  Aligned_cols=232  Identities=20%  Similarity=0.277  Sum_probs=195.5

Q ss_pred             ccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..++.+.++||+|+||+||+|+++       ++.||||+++..   .....+.|.+| ++|++++|||||+++|+|.+++
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            346788899999999999999873       678999999863   34556789999 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc---------------cCCCHHHHHHHHHHHHh------------------hhcccCCCc
Q 039021          203 EMILITEYLPKGNLKGILSKK---------------VRLDLPTALRYALDIAR------------------NLLQDEGDH  249 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~---------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~  249 (464)
                      .+|||||||++|+|.++++..               +++++.+++.|+.|||+                  |||+++++.
T Consensus       117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~  196 (329)
T 4aoj_A          117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV  196 (329)
T ss_dssp             SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc
Confidence            999999999999999999753               46999999999999987                  999999999


Q ss_pred             eeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhcccccc
Q 039021          250 LKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVN  322 (464)
Q Consensus       250 ~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~  322 (464)
                      +||+|||+|+......     ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+ .+....+..+
T Consensus       197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g  276 (329)
T 4aoj_A          197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG  276 (329)
T ss_dssp             EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT
T ss_pred             EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999999765322     23459999999999999999999999999999999999 999999877 4444444444


Q ss_pred             CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       323 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .++..+ ..+|+++.+||.+||+.||++||||.||+++|+.+.+
T Consensus       277 ~~~~~p-~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          277 RELERP-RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             CCCCCC-TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCc-ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            455544 6799999999999999999999999999999998854

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.9e-52  Score=397.08  Aligned_cols=234  Identities=19%  Similarity=0.236  Sum_probs=198.1

Q ss_pred             cccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          126 NFDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       126 ~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      ++...  ++++.+.||+|+||+||+|++.       ++.||||+++....  ....+.|.+| .+|++++|||||+++|+
T Consensus        22 ei~~~--~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~   97 (308)
T 4gt4_A           22 EISLS--AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GPLREEFRHEAMLRARLQHPNVVCLLGV   97 (308)
T ss_dssp             BCCGG--GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC--C-CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCCHH--HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC--hHHHHHHHHHHHHHHhCCCCCCCCcceE
Confidence            34444  4566789999999999999973       57899999986432  3345678999 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhc
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLL  243 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nil  243 (464)
                      |.+++.++||||||++|+|.++|..+                ..+++.+++.|+.|||+                  |||
T Consensus        98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NIL  177 (308)
T 4gt4_A           98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL  177 (308)
T ss_dssp             ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceE
Confidence            99999999999999999999999642                46899999999999997                  999


Q ss_pred             ccCCCceeEecchhhhhhccc-----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchh
Q 039021          244 QDEGDHLKIGEYWVQMFYEQI-----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFM  316 (464)
Q Consensus       244 l~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~  316 (464)
                      +++++.+||+|||+|+.....     .....||+.|||||++.+..|+.++|||||||+||||+| |..||.+.+ .+..
T Consensus       178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~  257 (308)
T 4gt4_A          178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV  257 (308)
T ss_dssp             ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred             ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            999999999999999876532     223459999999999999999999999999999999998 899999877 4444


Q ss_pred             ccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          317 HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ..+..+..++.+ ..+|+++.+||.+||+.||++||||++|+++|+.+
T Consensus       258 ~~i~~~~~~~~p-~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          258 EMIRNRQVLPCP-DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHcCCCCCCc-ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            444444444443 67999999999999999999999999999998753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8.3e-52  Score=399.55  Aligned_cols=229  Identities=17%  Similarity=0.260  Sum_probs=193.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||||++....... ...+.+.+| ++|++|+|||||+++++|.+++.+|||||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            7999999999999999999985  8999999998765443 446788899 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CC
Q 039021          210 YLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HP  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~  266 (464)
                      ||+||+|.++|..+  ..+++.+++.|+.||+.                  |||++++|.+||+|||+|+.....   ..
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  183 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR  183 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence            99999999999653  46799999999999987                  999999999999999999977533   22


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      +.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ .+....+..+..+.. +..+|+++.+||.+||+
T Consensus       184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~-~~~~s~~~~~li~~~L~  262 (350)
T 4b9d_A          184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV-SLHYSYDLRSLVSQLFK  262 (350)
T ss_dssp             HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC-CTTSCHHHHHHHHHHTC
T ss_pred             ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcc
Confidence            3459999999999999999999999999999999999999999887 334444433333333 36689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~  363 (464)
                      +||++|||+.|+++|-+.
T Consensus       263 ~dP~~R~s~~e~l~hp~~  280 (350)
T 4b9d_A          263 RNPRDRPSVNSILEKGFI  280 (350)
T ss_dssp             SSGGGSCCHHHHHTSHHH
T ss_pred             CChhHCcCHHHHhcCHHh
Confidence            999999999999998664

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-51  Score=391.06  Aligned_cols=240  Identities=21%  Similarity=0.370  Sum_probs=194.6

Q ss_pred             CCCccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          122 SNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       122 ~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      ...|+++..  ++.+.+.||+|+||+||+|++++ .||||+++.... ..+..+.|.+| ++|++++|||||+++|++.+
T Consensus        28 ~~~Wei~~~--~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  103 (307)
T 3omv_A           28 SYYWEIEAS--EVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK  103 (307)
T ss_dssp             -CCCBCCTT--SCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             CcCcEEcHH--HeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC
Confidence            345777665  56778999999999999999866 599999985433 34556789999 99999999999999998764


Q ss_pred             CCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                       +.++||||||+||+|.++|+. .+++++.+++.|+.|||+                  |||+++++.+||+|||+|+..
T Consensus       104 -~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          104 -DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK  182 (307)
T ss_dssp             -SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred             -CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceec
Confidence             568999999999999999975 468999999999999997                  999999999999999999876


Q ss_pred             ccc-----CCCCcCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhc-cccccCC-CCc--c
Q 039021          262 EQI-----HPNQENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMH-LKSVNFE-PKF--Q  328 (464)
Q Consensus       262 ~~~-----~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~-~~~~~~~-~~~--~  328 (464)
                      ...     ....+||+.|||||++.+   ..|+.++|||||||+||||+||+.||.+.+ ..... ....+.. |..  .
T Consensus       183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~  262 (307)
T 3omv_A          183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKL  262 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTS
T ss_pred             ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccc
Confidence            532     234469999999999864   468999999999999999999999998765 22222 2222221 211  2


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +..+|+++.+||.+||+.||++||||.+|+++|+.+..
T Consensus       263 ~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            25689999999999999999999999999999988754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.3e-52  Score=396.98  Aligned_cols=230  Identities=14%  Similarity=0.161  Sum_probs=200.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++++.||+|+||+||+|+++  |+.||+|++.+.........+.+.+| ++|++++|||||+++++|++++.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            37999999999999999999984  88999999986543334455678899 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----C
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----H  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----~  265 (464)
                      |||+||+|.+++++.+.+++.++..|+.||+.                  |||++.++.+||+|||+|+.+...     .
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~  191 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA  191 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence            99999999999999899999999999999987                  999999999999999999976422     2


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      .+.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+...+...+....+.++ ..+++++.+||.+||+
T Consensus       192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p-~~~s~~~~dli~~lL~  270 (311)
T 4aw0_A          192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP-EKFFPKARDLVEKLLV  270 (311)
T ss_dssp             CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-TTCCHHHHHHHHHHSC
T ss_pred             cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-cccCHHHHHHHHHHcc
Confidence            345799999999999999999999999999999999999999998774333333333344554 5689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLE  362 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~  362 (464)
                      +||++|||+.|++.+-+
T Consensus       271 ~dp~~R~t~~e~~~~~~  287 (311)
T 4aw0_A          271 LDATKRLGCEEMEGYGP  287 (311)
T ss_dssp             SSGGGSTTSGGGTCHHH
T ss_pred             CCHhHCcChHHHcCCHH
Confidence            99999999999766543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.5e-51  Score=384.52  Aligned_cols=229  Identities=21%  Similarity=0.236  Sum_probs=186.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||+|+++  |+.||+|++.+...........+.+| ++|++++|||||++++++.+.+.+|||||
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            6999999999999999999984  89999999987655555556678899 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~  269 (464)
                      || +|+|.+++.+++++++.++..++.||+.                  |||+++++.+||+|||+|+.....  ..+.+
T Consensus        94 y~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~  172 (275)
T 3hyh_A           94 YA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC  172 (275)
T ss_dssp             CC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------
T ss_pred             CC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCee
Confidence            99 6799999999899999999999999987                  999999999999999999877643  23456


Q ss_pred             CCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          270 NSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      ||+.|||||++.+..| +.++||||+||++|+|++|+.||.+.+............+.++ ..+|+++.+||.+||++||
T Consensus       173 GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP  251 (275)
T 3hyh_A          173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNP  251 (275)
T ss_dssp             --CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-TTSCHHHHHHHHHHSCSSG
T ss_pred             ECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHccCCh
Confidence            9999999999998876 5799999999999999999999998774433333333344444 5689999999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEE  363 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~  363 (464)
                      ++|||+.|+++|-|.
T Consensus       252 ~~R~s~~eil~hpw~  266 (275)
T 3hyh_A          252 LNRISIHEIMQDDWF  266 (275)
T ss_dssp             GGSCCHHHHHHCHHH
T ss_pred             hHCcCHHHHHcCccc
Confidence            999999999999764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.7e-51  Score=391.95  Aligned_cols=230  Identities=18%  Similarity=0.189  Sum_probs=196.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|++.++||+|+||+||+|+++  |+.||||+++....        ..+| .+|++++|||||+++++|.+++.+||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm  129 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM  129 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            35888899999999999999985  89999999986422        2468 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccC----
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~----  265 (464)
                      |||+||+|.++|++.+.+++.+++.|+.||+.                  |||++.+| .+||+|||+|+.+....    
T Consensus       130 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~  209 (336)
T 4g3f_A          130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS  209 (336)
T ss_dssp             CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence            99999999999998889999999999999987                  99999987 69999999998765321    


Q ss_pred             ----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCC-ccCCCCcHHHHHH
Q 039021          266 ----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPK-FQISRCPNRLKQL  339 (464)
Q Consensus       266 ----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l  339 (464)
                          ...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+... +....+.....+. ..++.+|+++.+|
T Consensus       210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~l  289 (336)
T 4g3f_A          210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQA  289 (336)
T ss_dssp             ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHH
T ss_pred             eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHH
Confidence                234699999999999999999999999999999999999999988763 3333322222211 1236789999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      |.+||++||++|||+.||+++|........
T Consensus       290 i~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          290 IQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            999999999999999999999988876554

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-50  Score=383.54  Aligned_cols=227  Identities=15%  Similarity=0.178  Sum_probs=190.8

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee----CCceEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL----GEEMIL  206 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~----~~~~~l  206 (464)
                      |++.++||+|+||+||+|.++  +..||+|++...... ....+.+.+| ++|++|+|||||+++++|.+    .+.+||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence            466788999999999999985  889999999865443 3446778999 99999999999999999975    346899


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------hhcccC-CCceeEecchhhhhhccc-
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------NLLQDE-GDHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------Nill~~-~~~~kl~DFG~a~~~~~~-  264 (464)
                      |||||+||+|.+++++.+.+++..+..|+.||+.                    |||++. ++.+||+|||+|+..... 
T Consensus       107 vmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~  186 (290)
T 3fpq_A          107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence            9999999999999998889999999999999987                    999985 789999999999875533 


Q ss_pred             CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-c-chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          265 HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-F-DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      ..+.+||+.|||||++.+ .|+.++|||||||++|||++|+.||.+.. . .....+..+..+...+..+++++.+||.+
T Consensus       187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~  265 (290)
T 3fpq_A          187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHH
Confidence            234569999999998865 69999999999999999999999997654 2 23333333333333335678999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ||++||++|||+.|+++|.+
T Consensus       266 ~L~~dP~~R~s~~e~l~Hp~  285 (290)
T 3fpq_A          266 CIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             HSCSSGGGSCCHHHHHTSGG
T ss_pred             HccCChhHCcCHHHHhcCcc
Confidence            99999999999999999854

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.6e-51  Score=394.48  Aligned_cols=227  Identities=17%  Similarity=0.263  Sum_probs=196.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|++.+.||+|+||+||+|+++  |+.||||++.....   ...+.+.+| ++|++++|||||+++++|.+++.+|||||
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE  151 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  151 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5888999999999999999995  89999999986432   234567889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~  268 (464)
                      ||+||+|.+++.+ +.+++.++..|+.||+.                  |||++.+|.+||+|||+|+.+...   ..+.
T Consensus       152 y~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~  230 (346)
T 4fih_A          152 FLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL  230 (346)
T ss_dssp             CCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             CCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence            9999999999976 57999999999999987                  999999999999999999987533   3456


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~  346 (464)
                      +||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ .+....+.....+.++ ...+|+++.+||.+||++
T Consensus       231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~  310 (346)
T 4fih_A          231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR  310 (346)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCS
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCC
Confidence            79999999999999999999999999999999999999998877 3333333333333322 256899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEE  363 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~  363 (464)
                      ||++|||+.|+++|-|.
T Consensus       311 dP~~R~ta~e~l~Hp~~  327 (346)
T 4fih_A          311 DPAQRATAAELLKHPFL  327 (346)
T ss_dssp             STTTSCCHHHHTTCGGG
T ss_pred             ChhHCcCHHHHhcCHhh
Confidence            99999999999998653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.6e-50  Score=393.30  Aligned_cols=240  Identities=18%  Similarity=0.240  Sum_probs=200.8

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEeC-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC-Cceee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWRG-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH-PNILQ  193 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h-pnIv~  193 (464)
                      ..|+++.  .+|++++.||+|+||+||+|++.+       +.||||+++....  ....+.+.+| ++|++++| ||||+
T Consensus        57 ~~wEi~~--~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           57 SKWEFPR--DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             HHHBCCG--GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccEecH--HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            3466654  478899999999999999999853       5799999986532  3445678889 99999965 99999


Q ss_pred             eeceeeeC-CceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh----------------
Q 039021          194 FLGSIVLG-EEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR----------------  240 (464)
Q Consensus       194 ~~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~----------------  240 (464)
                      ++|+|.+. +.++||||||++|+|.++|+..                ..+++.+++.|+.|||+                
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK  212 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  212 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccC
Confidence            99999764 5789999999999999999753                34899999999999987                


Q ss_pred             --hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc
Q 039021          241 --NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS  312 (464)
Q Consensus       241 --Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~  312 (464)
                        |||+++++.+||+|||+|+......     ....||+.|||||++.+..|+.++|||||||+||||+| |+.||.+..
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence              9999999999999999999765322     23348999999999999999999999999999999998 999998866


Q ss_pred             -cc-hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          313 -FD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       313 -~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                       .+ ....+..+.++..+ ..+|+++.+||.+||+.||++||||.+|+++|+.+.+.
T Consensus       293 ~~~~~~~~i~~g~~~~~p-~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          293 IDEEFCRRLKEGTRMRAP-DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             CSHHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence             22 33333344455544 66899999999999999999999999999999988653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.2e-51  Score=387.57  Aligned_cols=229  Identities=17%  Similarity=0.158  Sum_probs=191.0

Q ss_pred             cccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+|++++.||+|+||+||+|++     .++.||+|++++...... ....+.+| ++|++++|||||+++++|.+++.+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            3799999999999999999987     267899999986543222 22357778 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---c
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---I  264 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~  264 (464)
                      ||||||+||+|.+++.+.+.+++.++..++.||+.                  |||++++|.+||+|||+|+....   .
T Consensus       103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  182 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK  182 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcc
Confidence            99999999999999999889999999999999987                  99999999999999999987543   2


Q ss_pred             CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          265 HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      ..+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+.......+....+.++ ..+|+++.+||.+||
T Consensus       183 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L  261 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QFLSPEAQSLLRMLF  261 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHT
T ss_pred             ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC-CcCCHHHHHHHHHHc
Confidence            3455799999999999999999999999999999999999999998873333333323344444 568999999999999


Q ss_pred             ccCCCCCCC-----HHHHHHHHH
Q 039021          345 NKDPSKRPT-----FAAVIITLE  362 (464)
Q Consensus       345 ~~dp~~Rpt-----~~~i~~~l~  362 (464)
                      ++||++|||     ++|+++|.+
T Consensus       262 ~~dP~~R~ta~~~~~~eil~Hp~  284 (304)
T 3ubd_A          262 KRNPANRLGAGPDGVEEIKRHSF  284 (304)
T ss_dssp             CSSGGGSTTCSTTTHHHHHTSGG
T ss_pred             ccCHHHCCCCCcCCHHHHHcCcc
Confidence            999999998     478888754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.3e-50  Score=395.16  Aligned_cols=227  Identities=17%  Similarity=0.264  Sum_probs=196.6

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|++.+.||+|+||+||+|+++  |+.||||++.....   ...+.+.+| .+|++++|||||+++++|.+++.+||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            35999999999999999999995  89999999986432   224567889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~  267 (464)
                      |||+||+|.++++. +.+++.++..|+.||+.                  ||||+.+|.+||+|||+|+.+...   ..+
T Consensus       228 Ey~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  306 (423)
T 4fie_A          228 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  306 (423)
T ss_dssp             ECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred             eCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence            99999999999975 47999999999999987                  999999999999999999877533   235


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~  345 (464)
                      .+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ .+....+.....+.+. ...+|+++.+||.+||+
T Consensus       307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~  386 (423)
T 4fie_A          307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV  386 (423)
T ss_dssp             CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSC
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcC
Confidence            569999999999999999999999999999999999999998877 3333333333333322 25689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLE  362 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~  362 (464)
                      +||++|||+.|+++|-+
T Consensus       387 ~dP~~R~ta~ell~Hp~  403 (423)
T 4fie_A          387 RDPAQRATAAELLKHPF  403 (423)
T ss_dssp             SSTTTSCCHHHHTTCGG
T ss_pred             CChhHCcCHHHHhcCHH
Confidence            99999999999999865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1e-47  Score=367.77  Aligned_cols=229  Identities=18%  Similarity=0.286  Sum_probs=179.1

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC----ceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE----EMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~----~~~lv  207 (464)
                      +|.+.+.||+|+||+||+|+++|+.||||+++..    ......+..| ..+.+++|||||++++++.+++    .+|||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            5788899999999999999999999999999753    1111222334 5567889999999999998754    57999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------------hhcccCCCceeEecchhhhhh
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      ||||++|+|.++|+.+ .++++.+.+++.|+++                          |||++.++++||+|||+|+..
T Consensus        80 ~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  158 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             ecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence            9999999999999765 7999999999999986                          999999999999999999876


Q ss_pred             cccC-------CCCcCCCCcccccccccC------CCCCcccchhHHHHHHHHHhCCCCCCCCcc---------------
Q 039021          262 EQIH-------PNQENSQRNDNSSIASNV------LDDTKKDICSFGYIFYQMLEGKHLQTNNSF---------------  313 (464)
Q Consensus       262 ~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---------------  313 (464)
                      ....       ....||+.|||||++.+.      .|+.++|||||||++|||+||..||.....               
T Consensus       159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~  238 (303)
T 3hmm_A          159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence            5322       123599999999999764      367899999999999999999876643220               


Q ss_pred             chhcc-c-cccCCCCccC----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          314 DFMHL-K-SVNFEPKFQI----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       314 ~~~~~-~-~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +.+.. . ....+|.++.    ..+++.+.+||.+||+.||++||||.+|++.|+.+.+
T Consensus       239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            01111 1 1122333321    2245688999999999999999999999999988753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.7e-47  Score=362.35  Aligned_cols=224  Identities=17%  Similarity=0.146  Sum_probs=174.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-------
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-------  202 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-------  202 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|+++...  .....+.+.+| ++|++|+|||||+++++|.+.+       
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            6899999999999999999985  8999999998643  34455678899 9999999999999999997644       


Q ss_pred             -----ceEEEEEecCCCChHHHHhhccC---CCHHHHHHHHHHHHh------------------hhcccCCCceeEecch
Q 039021          203 -----EMILITEYLPKGNLKGILSKKVR---LDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       203 -----~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG  256 (464)
                           .+|||||||+||+|.+++..++.   .++..++.|+.||+.                  |||++.++.+||+|||
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence                 37999999999999999987644   445668899999986                  9999999999999999


Q ss_pred             hhhhhcccC---------------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhccc
Q 039021          257 VQMFYEQIH---------------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLK  319 (464)
Q Consensus       257 ~a~~~~~~~---------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~  319 (464)
                      +|+......               .+.+||+.|||||++.+..|+.++|||||||++|||++   ||.....  ..+...
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~  240 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV  240 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHH
Confidence            998765321               22359999999999999999999999999999999996   8865431  222222


Q ss_pred             cccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .....++.. ...++.+.+||.+||++||++|||+.|+++|-+
T Consensus       241 ~~~~~p~~~-~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~  282 (299)
T 4g31_A          241 RNLKFPPLF-TQKYPCEYVMVQDMLSPSPMERPEAINIIENAV  282 (299)
T ss_dssp             HTTCCCHHH-HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             hcCCCCCCC-cccCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence            222122211 334677889999999999999999999998743

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.5e-45  Score=360.95  Aligned_cols=229  Identities=18%  Similarity=0.214  Sum_probs=188.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee------CCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL------GEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~------~~~  203 (464)
                      +|++++.||+|+||+||+|+++  |+.||||+++..... ....+.+.+| ++|++++|||||++++++..      .+.
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            6999999999999999999985  899999999865433 3445677889 99999999999999998764      357


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc--
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ--  263 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~--  263 (464)
                      +|||||||+ |+|.+++..++.+++.++..|+.||+.                  |||++.++.+||+|||+|+.+..  
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~  212 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP  212 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred             EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence            899999996 689999998899999999999999987                  99999999999999999987642  


Q ss_pred             -----cCCCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--cCC----------
Q 039021          264 -----IHPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--NFE----------  324 (464)
Q Consensus       264 -----~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~~~----------  324 (464)
                           ...+.+||+.|||||++.+. .|+.++||||+||++|||++|+.||.+.+ .+....+..  +.+          
T Consensus       213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~  292 (398)
T 4b99_A          213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA  292 (398)
T ss_dssp             ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC----
T ss_pred             cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhh
Confidence                 22345699999999998874 56999999999999999999999998876 222111110  000          


Q ss_pred             ----------CCcc-------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          325 ----------PKFQ-------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       325 ----------~~~~-------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                +...       .+.+++++.+||.+||..||++|||+.|+++|.+.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  348 (398)
T 4b99_A          293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL  348 (398)
T ss_dssp             -CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             hhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence                      0000       13478999999999999999999999999999653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.5e-45  Score=379.91  Aligned_cols=231  Identities=15%  Similarity=0.152  Sum_probs=192.8

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHH---HH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAK---DN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~---~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      -.+|++++.||+|+||+||+|+++  |+.||+|++.+...........+.   .+ .+++.++|||||+++++|.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            347999999999999999999984  899999999864332222222333   34 566677999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-C
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-H  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-~  265 (464)
                      |||||||+||+|.++|.+.+.+++..++.|+.||+.                  ||||+.+|++||+|||+|+..... .
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~  347 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  347 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence            999999999999999999899999999999999986                  999999999999999999877643 3


Q ss_pred             CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc---hhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD---FMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                      .+.+||+.|||||++.. ..|+.++|||||||++|||++|..||.+....   .+........+.++ ..+|+++.+||.
T Consensus       348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p-~~~S~~a~dLI~  426 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP-DSFSPELRSLLE  426 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC-TTSCHHHHHHHH
T ss_pred             CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC-ccCCHHHHHHHH
Confidence            45679999999999964 68999999999999999999999999875421   12222223344444 568999999999


Q ss_pred             HHcccCCCCCCC-----HHHHHHHHH
Q 039021          342 QCTNKDPSKRPT-----FAAVIITLE  362 (464)
Q Consensus       342 ~cl~~dp~~Rpt-----~~~i~~~l~  362 (464)
                      +||++||.+|++     +.||++|.+
T Consensus       427 ~lL~~dP~~Rl~~~~~ga~ei~~Hpf  452 (689)
T 3v5w_A          427 GLLQRDVNRRLGCLGRGAQEVKESPF  452 (689)
T ss_dssp             HHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred             HHccCCHhHCCCCCCCCHHHHhcCcc
Confidence            999999999998     799999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.5e-44  Score=374.13  Aligned_cols=227  Identities=15%  Similarity=0.187  Sum_probs=194.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++....   ....+.+.+| ++|+.|+|||||+++++|.+.+.+|||||
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            6999999999999999999985  8999999998642   3345678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCC--CceeEecchhhhhhcccC--C
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEG--DHLKIGEYWVQMFYEQIH--P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~--~~~kl~DFG~a~~~~~~~--~  266 (464)
                      ||+||+|.++|.. ++.+++.++..|+.||+.                  |||++.+  +.+||+|||+|+.+....  .
T Consensus       235 ~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~  314 (573)
T 3uto_A          235 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  314 (573)
T ss_dssp             CCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred             ecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence            9999999999964 468999999999999986                  9999854  889999999999875432  3


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-C-CCccCCCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-E-PKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~c  343 (464)
                      ..+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+. +....+.... . +......+|+++.+||.+|
T Consensus       315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~  394 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKL  394 (573)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTT
T ss_pred             eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHH
Confidence            45699999999999999999999999999999999999999998773 3333222211 1 1112256899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |+.||.+|||+.|+++|-|
T Consensus       395 L~~dp~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          395 LLADPNTRMTIHQALEHPW  413 (573)
T ss_dssp             SCSSGGGSCCHHHHHHSTT
T ss_pred             ccCChhHCcCHHHHhcCcC
Confidence            9999999999999999854

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.7e-43  Score=344.62  Aligned_cols=223  Identities=13%  Similarity=0.153  Sum_probs=179.4

Q ss_pred             cccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~  204 (464)
                      .+|++.+.||+|+||+||+|+++     ++.||+|.+....     ...++.+| ++|+.+ +|||||+++++|.+.+.+
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            46999999999999999999874     6789999987642     12356678 999988 699999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhhhhhccc-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a~~~~~~-  264 (464)
                      |||||||+||+|.++++   .+++.++..++.||+.                  |||++.+ +.+||+|||+|+..... 
T Consensus        96 ~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~  172 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK  172 (361)
T ss_dssp             EEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred             EEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence            99999999999999984   5999999999999987                  9999877 79999999999754321 


Q ss_pred             ------------------------------CCCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc
Q 039021          265 ------------------------------HPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF  313 (464)
Q Consensus       265 ------------------------------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~  313 (464)
                                                    ....+||+.|||||++.+. .|+.++||||+||++|||++|+.||.....
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~  252 (361)
T 4f9c_A          173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD  252 (361)
T ss_dssp             CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence                                          1233599999999999875 589999999999999999999999965431


Q ss_pred             --chhcccc-------------------------------------ccC---CCC------------ccCCCCcHHHHHH
Q 039021          314 --DFMHLKS-------------------------------------VNF---EPK------------FQISRCPNRLKQL  339 (464)
Q Consensus       314 --~~~~~~~-------------------------------------~~~---~~~------------~~~~~~~~~~~~l  339 (464)
                        +.+..+.                                     ...   .+.            .....+|+++.+|
T Consensus       253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL  332 (361)
T 4f9c_A          253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL  332 (361)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred             HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence              1110000                                     000   000            0113478999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      |.+||+.||++|||++|+++|.+
T Consensus       333 l~~lL~~dP~~R~ta~eaL~Hp~  355 (361)
T 4f9c_A          333 LDKLLDLNPASRITAEEALLHPF  355 (361)
T ss_dssp             HHHHTCSCTTTSCCHHHHHTSGG
T ss_pred             HHHHCcCChhHCcCHHHHhcCcc
Confidence            99999999999999999999865

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.2e-41  Score=327.64  Aligned_cols=237  Identities=23%  Similarity=0.377  Sum_probs=193.2

Q ss_pred             ccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      +++...+|++.+.||+|+||.||+|+++|+.||+|++...... ....+.+.+| .++++++||||+++++++.+.+.++
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS  110 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence            4444558999999999999999999999999999999865433 3445678889 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhcc---CCCHHHHHHHHHHHHh--------------------hhcccCCCceeEecchhhhhhc
Q 039021          206 LITEYLPKGNLKGILSKKV---RLDLPTALRYALDIAR--------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~--------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      +||||+++|+|.+++...+   .+++..++.++.|+++                    |||++.++.+||+|||+++...
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  190 (309)
T 3p86_A          111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA  190 (309)
T ss_dssp             EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred             EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence            9999999999999997654   3999999999999986                    9999999999999999998665


Q ss_pred             cc---CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc-ccCCCCccCCCCcHHHH
Q 039021          263 QI---HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS-VNFEPKFQISRCPNRLK  337 (464)
Q Consensus       263 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~  337 (464)
                      ..   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... +...... .......+ ..+++++.
T Consensus       191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~  269 (309)
T 3p86_A          191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP-RNLNPQVA  269 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCC-TTSCHHHH
T ss_pred             ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC-ccCCHHHH
Confidence            43   2334599999999999999999999999999999999999999988762 2222221 22223333 56899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +||.+||+.||.+|||+.++++.|+.+.
T Consensus       270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          270 AIIEGCWTNEPWKRPSFATIMDLLRPLI  297 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=7.7e-42  Score=331.39  Aligned_cols=229  Identities=17%  Similarity=0.196  Sum_probs=197.2

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++  .|+.||+|++...... ....+.+.+| ++|+.++||||+++++++.+.+.+|+|||
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e   94 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME   94 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence            699999999999999999998  4899999999875433 3445677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~  269 (464)
                      |+++|+|.+++..++.+++.++..++.|+++                  |||++.++.+||+|||+++.....  ....+
T Consensus        95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  174 (328)
T 3fe3_A           95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC  174 (328)
T ss_dssp             CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTS
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccccc
Confidence            9999999999988889999999999999987                  999999999999999999876532  23456


Q ss_pred             CCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          270 NSQRNDNSSIASNVLDD-TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      ||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+...............+ ..+++++.+|+++||..||
T Consensus       175 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP  253 (328)
T 3fe3_A          175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP-FYMSTDCENLLKRFLVLNP  253 (328)
T ss_dssp             SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHCCSST
T ss_pred             CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHCCCCh
Confidence            99999999999988775 789999999999999999999998874333333222233333 4579999999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEE  363 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~  363 (464)
                      .+|||+.++++|.+.
T Consensus       254 ~~R~t~~eil~h~~~  268 (328)
T 3fe3_A          254 IKRGTLEQIMKDRWI  268 (328)
T ss_dssp             TTSCCHHHHTTCTTT
T ss_pred             hHCcCHHHHhcCHhh
Confidence            999999999998653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-42  Score=330.76  Aligned_cols=230  Identities=23%  Similarity=0.305  Sum_probs=199.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||+||+|+++  |+.||+|++++.........+.+.+| .+++.++||||+++++++.+.+.+|+||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            37899999999999999999984  88999999986432222345567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      ||++||+|.+++...+.+++..+..++.||+.                  |||++.+|.+||+|||+++.........+|
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~g  165 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  165 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccC
Confidence            99999999999998889999999999999986                  999999999999999999987766667789


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      |+.|+|||++.+..++.++|||||||++|||++|..||...+..............++ ..+++++.+||.+||..||++
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~lL~~dp~~  244 (318)
T 1fot_A          166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP-PFFNEDVKDLLSRLITRDLSQ  244 (318)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSCTTT
T ss_pred             CccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHhccCHHH
Confidence            9999999999999999999999999999999999999988763222222222233443 568999999999999999999


Q ss_pred             CC-----CHHHHHHHHH
Q 039021          351 RP-----TFAAVIITLE  362 (464)
Q Consensus       351 Rp-----t~~~i~~~l~  362 (464)
                      ||     ++.++++|.+
T Consensus       245 R~~~~~~~~~~i~~hp~  261 (318)
T 1fot_A          245 RLGNLQNGTEDVKNHPW  261 (318)
T ss_dssp             CTTSSTTTTHHHHTSGG
T ss_pred             cCCCcCCCHHHHhcCcc
Confidence            99     8999998864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.5e-41  Score=330.27  Aligned_cols=230  Identities=17%  Similarity=0.195  Sum_probs=196.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||+||+|+++  |+.||+|++++...........+.+| .+|+.++||||+++++++.+.+.+|+||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            37899999999999999999984  88999999986432223345567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~  267 (464)
                      ||++||+|.+++...+.+++..++.++.||+.                  |||++.++.+||+|||+++....   ....
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~  164 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT  164 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccc
Confidence            99999999999988889999999999999986                  99999999999999999986432   2234


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..............++ ..+++++.+||.+||+.|
T Consensus       165 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~lL~~d  243 (337)
T 1o6l_A          165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKD  243 (337)
T ss_dssp             CEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSS
T ss_pred             cccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhcC
Confidence            5699999999999999999999999999999999999999988763333222222233443 568999999999999999


Q ss_pred             CCCCC-----CHHHHHHHHH
Q 039021          348 PSKRP-----TFAAVIITLE  362 (464)
Q Consensus       348 p~~Rp-----t~~~i~~~l~  362 (464)
                      |++||     ++.++++|.+
T Consensus       244 P~~R~g~~~~~~~ei~~h~~  263 (337)
T 1o6l_A          244 PKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             TTTSTTCSTTTHHHHHTSGG
T ss_pred             HHHhcCCCCCCHHHHHcCCC
Confidence            99999     8999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5e-41  Score=331.32  Aligned_cols=236  Identities=19%  Similarity=0.324  Sum_probs=199.0

Q ss_pred             cccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeecee
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSI  198 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~  198 (464)
                      ...+|.+++.||+|+||.||+|++.         +..||+|+++...  .....+.+.+| .+|+++ +||||+++++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            3457999999999999999999973         3579999998652  34556778889 999999 899999999999


Q ss_pred             eeCCceEEEEEecCCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh------------------hhcc
Q 039021          199 VLGEEMILITEYLPKGNLKGILSKKV----------------RLDLPTALRYALDIAR------------------NLLQ  244 (464)
Q Consensus       199 ~~~~~~~lv~E~~~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~------------------Nill  244 (464)
                      .+.+.+|+||||+++|+|.+++....                .+++.+++.++.||++                  |||+
T Consensus       157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV  236 (370)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence            99999999999999999999997643                4789999999999987                  9999


Q ss_pred             cCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hhc
Q 039021          245 DEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FMH  317 (464)
Q Consensus       245 ~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~~  317 (464)
                      +.++.+||+|||+++......     ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.... ...
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999998765322     22347889999999999999999999999999999999 99999887633 333


Q ss_pred             cccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      ....+..+.. +..+++++.+||.+||+.||++|||+.+++++|+.+....
T Consensus       317 ~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          317 LLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             HHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCC-CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            3333333333 3568999999999999999999999999999999986543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.5e-41  Score=332.27  Aligned_cols=230  Identities=17%  Similarity=0.158  Sum_probs=199.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|+++  |+.||+|++...........+.+.+| ++|+.++||||+++++++.+.+.+|+||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            37999999999999999999984  88999999986432223345567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      ||++||+|.+++...+.+++..++.++.||+.                  |||++.++.+||+|||+++.........+|
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~g  200 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG  200 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccC
Confidence            99999999999998889999999999999986                  999999999999999999987766666779


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      |+.|+|||++.+..++.++|||||||++|||++|..||...+..............++ ..+++++.+||.+||+.||.+
T Consensus       201 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~lL~~dp~~  279 (350)
T 1rdq_E          201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP-SHFSSDLKDLLRNLLQVDLTK  279 (350)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTCCHHHHHHHHHHSCSCTTT
T ss_pred             CccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhcCHHh
Confidence            9999999999999999999999999999999999999988763333222222234444 568999999999999999999


Q ss_pred             CCC-----HHHHHHHHH
Q 039021          351 RPT-----FAAVIITLE  362 (464)
Q Consensus       351 Rpt-----~~~i~~~l~  362 (464)
                      ||+     +.+|++|.+
T Consensus       280 R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          280 RFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             CTTSSTTTTHHHHTSGG
T ss_pred             ccCCccCCHHHHHhCcC
Confidence            998     899998864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=4.6e-41  Score=340.14  Aligned_cols=230  Identities=22%  Similarity=0.355  Sum_probs=195.6

Q ss_pred             ccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC-ceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE-EMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~-~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|.++++.||+|+++...     ..+.+.+| .+|++++||||+++++++.+.. .++|||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            3478889999999999999999999999999998642     34578889 9999999999999999987765 799999


Q ss_pred             EecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCC
Q 039021          209 EYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~  268 (464)
                      ||+++|+|.++++..+  .+++..++.++.||++                  |||++.++.+||+|||+++.........
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  346 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  346 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence            9999999999998654  3799999999999987                  9999999999999999998665544445


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      .+++.|+|||++.+..++.++|||||||++|||++ |..||.... .+....+..+.++..+ ..+|+++.+||.+||+.
T Consensus       347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~  425 (450)
T 1k9a_A          347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP-DGCPPAVYDVMKNCWHL  425 (450)
T ss_dssp             CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCS
T ss_pred             CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CcCCHHHHHHHHHHcCC
Confidence            68899999999999999999999999999999998 999998876 3333334444444433 67899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ||++|||+.++++.|+.+..
T Consensus       426 dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          426 DAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHH
Confidence            99999999999999988753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.3e-41  Score=330.42  Aligned_cols=230  Identities=19%  Similarity=0.245  Sum_probs=195.8

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|.+  .++.||+|++.............+.+| .+++.++||||+++++++.+.+..++|||
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   89 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE   89 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence            699999999999999999998  488999999986432222334567889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~  269 (464)
                      |+ +|+|.+++...+.+++.+++.++.|++.                  |||++.++.+||+|||+++.....  ....+
T Consensus        90 ~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~  168 (336)
T 3h4j_B           90 YA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC  168 (336)
T ss_dssp             CC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred             CC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence            99 6799999988889999999999999987                  999999999999999999876543  24456


Q ss_pred             CCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          270 NSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      ||+.|+|||++.+..+ +.++|||||||++|+|++|..||...................+ ..+|+++.+||.+||+.||
T Consensus       169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP  247 (336)
T 3h4j_B          169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP-DFLSPGAQSLIRRMIVADP  247 (336)
T ss_dssp             TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCC-TTSCHHHHHHHHTTSCSSG
T ss_pred             CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCc-ccCCHHHHHHHHHHcCCCh
Confidence            9999999999988776 6899999999999999999999988763333333322223333 5689999999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEEV  364 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~~  364 (464)
                      .+|||+.|+++|.+.-
T Consensus       248 ~~Rpt~~eil~hp~~~  263 (336)
T 3h4j_B          248 MQRITIQEIRRDPWFN  263 (336)
T ss_dssp             GGSCCHHHHTTCHHHH
T ss_pred             hHCcCHHHHHhChhhc
Confidence            9999999999998754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1e-41  Score=333.60  Aligned_cols=229  Identities=19%  Similarity=0.206  Sum_probs=193.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|++.+.||+|+||+||+|+++  ++.||+|++++...........+..| .+++.+ +||||+++++++.+.+.+|+||
T Consensus        24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~  103 (353)
T 3txo_A           24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM  103 (353)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence            7899999999999999999985  88999999986533334445567778 899888 7999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~  267 (464)
                      ||++||+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+|+....   ....
T Consensus       104 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~  183 (353)
T 3txo_A          104 EFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT  183 (353)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-------
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccc
Confidence            99999999999998889999999999999986                  99999999999999999986432   2334


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.......+......++ ..+++++.+||++||+.|
T Consensus       184 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~lL~~d  262 (353)
T 3txo_A          184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP-TWLHEDATGILKSFMTKN  262 (353)
T ss_dssp             --CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSS
T ss_pred             cCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhhC
Confidence            5699999999999999999999999999999999999999998774333333333334444 558999999999999999


Q ss_pred             CCCCCCH------HHHHHHHH
Q 039021          348 PSKRPTF------AAVIITLE  362 (464)
Q Consensus       348 p~~Rpt~------~~i~~~l~  362 (464)
                      |++||++      .++++|.+
T Consensus       263 P~~R~~~~~~~~~~~il~hp~  283 (353)
T 3txo_A          263 PTMRLGSLTQGGEHAILRHPF  283 (353)
T ss_dssp             GGGSTTSGGGTCTHHHHTSGG
T ss_pred             HHHccCCcccCCHHHHhhCCc
Confidence            9999998      88998854

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.4e-41  Score=321.84  Aligned_cols=227  Identities=18%  Similarity=0.237  Sum_probs=192.0

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.+  .++.||+|++......   ..+.+.+| .++++++||||+++++++.+++.+++||
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   96 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence            4699999999999999999997  4889999999864322   23467788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++|+|.+++... .+++.++..++.|++.                  |||++.++.+||+|||+++......   ..
T Consensus        97 e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  175 (297)
T 3fxz_A           97 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (297)
T ss_dssp             ECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             ECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence            999999999999765 7999999999999986                  9999999999999999998765332   23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCc-cCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~  345 (464)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||.... ............+.. .+..+++.+.+||.+||+
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  255 (297)
T 3fxz_A          176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE  255 (297)
T ss_dssp             CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSC
T ss_pred             ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHcc
Confidence            459999999999999999999999999999999999999998876 222222222222222 235689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLE  362 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~  362 (464)
                      .||++|||+.++++|.+
T Consensus       256 ~dp~~Rps~~ell~h~~  272 (297)
T 3fxz_A          256 MDVEKRGSAKELLQHQF  272 (297)
T ss_dssp             SSTTTSCCHHHHTTCGG
T ss_pred             CChhHCcCHHHHhhChh
Confidence            99999999999998854

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.9e-41  Score=329.69  Aligned_cols=232  Identities=19%  Similarity=0.166  Sum_probs=195.6

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ...|.+++.||+|+||.||+|+++  |+.||+|++........   ...+.+.+| .+|++++||||+++++++.+.+.+
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            346999999999999999999985  88999999986543211   124568889 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC----ceeEecchhhhhhc
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD----HLKIGEYWVQMFYE  262 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~----~~kl~DFG~a~~~~  262 (464)
                      ++||||++||+|.+++...+.+++.++..++.||+.                  |||++.++    .+||+|||+++...
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~  170 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence            999999999999999998889999999999999987                  99998877    79999999998765


Q ss_pred             ccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCcc---CCCCcHHHH
Q 039021          263 QIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ---ISRCPNRLK  337 (464)
Q Consensus       263 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  337 (464)
                      ...  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..............++   ...+++++.
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  250 (361)
T 2yab_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK  250 (361)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHH
T ss_pred             CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHH
Confidence            432  345699999999999999999999999999999999999999988763222222211122222   156899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||.+||..||++|||+.++++|.+
T Consensus       251 ~li~~~L~~dP~~R~t~~e~l~hp~  275 (361)
T 2yab_A          251 DFIRKLLVKETRKRLTIQEALRHPW  275 (361)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             HHHHHHCCCChhHCcCHHHHhcCcC
Confidence            9999999999999999999998865

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4.7e-41  Score=333.02  Aligned_cols=230  Identities=13%  Similarity=0.168  Sum_probs=193.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||+||+|+++  ++.||+|++++...........+..| .+|+++ +|||||+++++|.+.+.+|||
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            37999999999999999999985  78999999997655555555667788 888877 899999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~  266 (464)
                      |||++||+|.+++...+.+++..++.++.||+.                  |||++.++.+||+|||+|+...   ....
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~  211 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS  211 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred             EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccc
Confidence            999999999999998889999999999999986                  9999999999999999998632   2334


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---------cchhccccccCCCCccCCCCcHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---------FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ..+||+.|+|||++.+..|+.++|||||||++|||++|+.||....         ..............++ ..+++++.
T Consensus       212 ~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p-~~~s~~~~  290 (396)
T 4dc2_A          212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP-RSLSVKAA  290 (396)
T ss_dssp             CCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC-TTSCHHHH
T ss_pred             cccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC-CcCCHHHH
Confidence            5569999999999999999999999999999999999999996432         1112222223344444 56899999


Q ss_pred             HHHHHHcccCCCCCCCH------HHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTF------AAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~------~~i~~~l~  362 (464)
                      +||++||+.||.+||++      .+|++|.+
T Consensus       291 ~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          291 SVLKSFLNKDPKERLGCHPQTGFADIQGHPF  321 (396)
T ss_dssp             HHHHHHTCSCTTTSTTCSTTTHHHHHHHSTT
T ss_pred             HHHHHHhcCCHhHcCCCCCCCCHHHHhcCcc
Confidence            99999999999999985      78888854

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=7.9e-41  Score=321.99  Aligned_cols=237  Identities=21%  Similarity=0.373  Sum_probs=198.1

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|.+++.||+|+||.||+|.++  ++.||+|.+..   ......+.+.+| +++++++||||+++++++.+++..++|
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   85 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI   85 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence            347899999999999999999985  88999999865   235566788899 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC--
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~--  266 (464)
                      |||+++|+|.++++. ...+++.++..++.|+++                  |||++.++.+||+|||+++.......  
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  165 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP  165 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence            999999999999987 578999999999999987                  99999999999999999987543221  


Q ss_pred             ---------------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhcc--ccccCCCCccC
Q 039021          267 ---------------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHL--KSVNFEPKFQI  329 (464)
Q Consensus       267 ---------------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~  329 (464)
                                     ...||+.|+|||++.+..++.++|||||||++|||++|..||..........  ..........+
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (310)
T 3s95_A          166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP  245 (310)
T ss_dssp             --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC
T ss_pred             cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC
Confidence                           3459999999999999999999999999999999999999987654211111  11111111123


Q ss_pred             CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       330 ~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ..+|+++.+++.+||+.||++|||+.++++.|+.+...+..
T Consensus       246 ~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          246 PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence            56889999999999999999999999999999998766543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=3.9e-41  Score=333.08  Aligned_cols=234  Identities=20%  Similarity=0.313  Sum_probs=198.4

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|.+.+.||+|+||.||+|+++  ++.||+|+++...  .......+.+| ++|++++||||+++++++.+.+..++
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            3447889999999999999999995  8899999998642  24455678889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||||+++|+|.++++.. ..+++..++.++.|+++                  |||++.++.+||+|||+++......  
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence            99999999999999764 46999999999999987                  9999999999999999998654321  


Q ss_pred             ---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHH
Q 039021          266 ---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                         ....+++.|+|||++.+..++.++|||||||++|||++ |..||.... .+.......+.+.+.+ ..+|+++.+||
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li  348 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCP-ELCPDAVFRLM  348 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCC-TTCCHHHHHHH
T ss_pred             ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHH
Confidence               11225778999999998899999999999999999998 999998877 3333333333344433 56899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+||+.||++|||+.+|++.|+.+..
T Consensus       349 ~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          349 EQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999998864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.5e-40  Score=317.66  Aligned_cols=234  Identities=18%  Similarity=0.179  Sum_probs=195.7

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+|++.  ++.||+|++...........+.+.+| .++++++||||+++++++.+.+.+++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            347999999999999999999984  88999999976555556667788999 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----  265 (464)
                      |||++||+|.+++...+++++.+++.++.|++.                  |||++.++.+||+|||+++......    
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  169 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT  169 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence            999999999999998889999999999999987                  9999999999999999998765332    


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc---cCCCCcHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF---QISRCPNRLKQLIA  341 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~li~  341 (464)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.+... ...........+..   ....+|+.+.++|.
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  249 (294)
T 4eqm_A          170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVIL  249 (294)
T ss_dssp             -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHH
T ss_pred             CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHH
Confidence            233499999999999999999999999999999999999999988762 22222222222221   12568999999999


Q ss_pred             HHcccCCCCCC-CHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRP-TFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rp-t~~~i~~~l~~~  364 (464)
                      +||+.||.+|| ++.++.+.|..+
T Consensus       250 ~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          250 RATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             HHhcCCHhHccccHHHHHHHHHHH
Confidence            99999999998 888888887765

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.2e-40  Score=325.24  Aligned_cols=230  Identities=13%  Similarity=0.168  Sum_probs=195.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|+++  ++.||+|++.+...........+.+| .+++++ +||||+++++++.+.+.+|+|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            37999999999999999999985  88999999997665556667778888 999887 899999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~  266 (464)
                      |||++||+|.+++...+.+++..++.++.||+.                  |||++.++.+||+|||+++...   ....
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~  168 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS  168 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence            999999999999988889999999999999986                  9999999999999999998643   2233


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc---------cchhccccccCCCCccCCCCcHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS---------FDFMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ..+||+.|+|||++.+..++.++|||||||++|||++|+.||....         ..............++ ..+++++.
T Consensus       169 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p-~~~s~~~~  247 (345)
T 3a8x_A          169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP-RSLSVKAA  247 (345)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC-TTSCHHHH
T ss_pred             ccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC-CCCCHHHH
Confidence            4569999999999999999999999999999999999999997521         1112222222233443 56899999


Q ss_pred             HHHHHHcccCCCCCCCH------HHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTF------AAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~------~~i~~~l~  362 (464)
                      +||.+||+.||.+||++      .++++|.+
T Consensus       248 ~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~  278 (345)
T 3a8x_A          248 SVLKSFLNKDPKERLGCHPQTGFADIQGHPF  278 (345)
T ss_dssp             HHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred             HHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence            99999999999999985      78888754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=322.98  Aligned_cols=237  Identities=19%  Similarity=0.309  Sum_probs=198.5

Q ss_pred             cccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ++...+|++.+.||+|+||.||+|++.     +..||+|+++...  .....+.+.+| .++++++||||+++++++.++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  122 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG  122 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            344557999999999999999999983     4469999998642  24456678889 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      +..++||||+++|+|.++++.. +.+++.+++.++.|++.                  |||++.++.+||+|||+++...
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          123 RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            9999999999999999999654 68999999999999986                  9999999999999999998765


Q ss_pred             ccC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcH
Q 039021          263 QIH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       263 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ...      ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.... .+.............+ ..+++
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~  281 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP-MGCPH  281 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCC-TTCCH
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCC-CCcCH
Confidence            322      12236788999999998999999999999999999999 999998876 3333333333333333 56899


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      ++.+||.+||..||++|||+.+|++.|+.+...
T Consensus       282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999988653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.2e-41  Score=330.13  Aligned_cols=231  Identities=19%  Similarity=0.214  Sum_probs=195.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      -.+|.+.+.||+|+||.||+|+++  |+.||+|++++...........+..| .+++.+ +||||+++++++.+.+.+|+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            347999999999999999999985  88999999986432222334456677 888876 99999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IH  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~  265 (464)
                      ||||++||+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++....   ..
T Consensus        96 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~  175 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  175 (345)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcc
Confidence            9999999999999998889999999999999987                  99999999999999999986432   23


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+............+.++ ..+++++.+||.+||.
T Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~lL~  254 (345)
T 1xjd_A          176 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-RWLEKEAKDLLVKLFV  254 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHSC
T ss_pred             cCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC-cccCHHHHHHHHHHhc
Confidence            455699999999999999999999999999999999999999988773333322222334444 5689999999999999


Q ss_pred             cCCCCCCCHH-HHHHHHH
Q 039021          346 KDPSKRPTFA-AVIITLE  362 (464)
Q Consensus       346 ~dp~~Rpt~~-~i~~~l~  362 (464)
                      .||++||++. +|++|.+
T Consensus       255 ~dp~~R~~~~~~i~~hp~  272 (345)
T 1xjd_A          255 REPEKRLGVRGDIRQHPL  272 (345)
T ss_dssp             SSGGGSBTTBSCGGGSGG
T ss_pred             CCHhHcCCChHHHHcCcc
Confidence            9999999997 8887754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.1e-40  Score=312.32  Aligned_cols=236  Identities=19%  Similarity=0.317  Sum_probs=198.1

Q ss_pred             CccccccccccccccccccceeeeeEEeEE-eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      .|.++  ..+|++.+.||+|+||.||+|++ +++.||+|++......    .+.+.+| +++++++||||+++++++.+.
T Consensus         4 ~~~i~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   77 (269)
T 4hcu_A            4 KWVID--PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ   77 (269)
T ss_dssp             -CBCC--GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cEEeC--hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            34444  34789999999999999999998 4788999999865432    2457889 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      +..++||||+++|+|.+++.. .+.+++..++.++.|++.                  ||+++.++.+||+|||+++...
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             CceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccc
Confidence            999999999999999999965 457999999999999986                  9999999999999999998764


Q ss_pred             cc----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHH
Q 039021          263 QI----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       263 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ..    .....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||..... +..........+ ..+..+++++
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  236 (269)
T 4hcu_A          158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-YKPRLASTHV  236 (269)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-CCCTTSCHHH
T ss_pred             ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccC-CCCCcCCHHH
Confidence            32    233447889999999999999999999999999999999 9999988773 333333332232 2335679999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+++.+||+.||++|||+.+++++|+.+.+
T Consensus       237 ~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          237 YQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999998854

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=8.1e-41  Score=327.16  Aligned_cols=229  Identities=16%  Similarity=0.176  Sum_probs=194.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|++.+.||+|+||+||+|+++  ++.||+|++++.........+.+..| .+|+.+ +||||+++++++.+.+.+|+||
T Consensus        21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~  100 (353)
T 2i0e_A           21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM  100 (353)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence            7999999999999999999984  78999999986432223334567778 888887 8999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~~  267 (464)
                      ||++||+|.+++...+.+++..++.++.||+.                  |||++.++.+||+|||+++...   .....
T Consensus       101 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~  180 (353)
T 2i0e_A          101 EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT  180 (353)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCccccc
Confidence            99999999999998889999999999999986                  9999999999999999998643   22345


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+......++ ..+++++.+||.+||..|
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~lL~~d  259 (353)
T 2i0e_A          181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP-KSMSKEAVAICKGLMTKH  259 (353)
T ss_dssp             CCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSC
T ss_pred             ccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHhhcC
Confidence            5699999999999999999999999999999999999999988773333333323344444 568999999999999999


Q ss_pred             CCCCCC-----HHHHHHHHH
Q 039021          348 PSKRPT-----FAAVIITLE  362 (464)
Q Consensus       348 p~~Rpt-----~~~i~~~l~  362 (464)
                      |.+||+     +.+|++|.+
T Consensus       260 P~~R~~~~~~~~~~i~~h~~  279 (353)
T 2i0e_A          260 PGKRLGCGPEGERDIKEHAF  279 (353)
T ss_dssp             TTSCTTCSTTHHHHHHTSGG
T ss_pred             HHHcCCCCCCCHHHHhcCcc
Confidence            999995     588888854

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.1e-40  Score=325.80  Aligned_cols=232  Identities=16%  Similarity=0.125  Sum_probs=196.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++...... ....+.+.+| .++++++||||+++++++.+.+..|+||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            46999999999999999999985  889999999875443 3445678889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||+++|+|.+++..+..+++.++..++.||+.                  |||++.+   +.+||+|||+++......  
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~  187 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  187 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence            99999999999988889999999999999987                  9999865   459999999998776432  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCcc---CCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ---ISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..............++   ...+++++.+||.+
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  267 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS  267 (362)
T ss_dssp             CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHH
T ss_pred             ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHH
Confidence            234699999999999999999999999999999999999999988763222222111111221   14579999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||+.||++|||+.++++|.+..
T Consensus       268 ~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          268 MLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             HSCSSGGGSCCHHHHTTSHHHH
T ss_pred             HcCCChhhCcCHHHHhcCcccC
Confidence            9999999999999999997754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.9e-40  Score=312.83  Aligned_cols=237  Identities=17%  Similarity=0.277  Sum_probs=196.3

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      ..|++.  ..+|++.+.||+|+||.||+|.++ +..||+|++......    .+.+.+| +++++++||||+++++++.+
T Consensus        17 ~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~   90 (283)
T 3gen_A           17 GSWEID--PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTK   90 (283)
T ss_dssp             CTTBCC--GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             CCccCC--HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEec
Confidence            445544  447899999999999999999986 668999999865432    2457888 99999999999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      .+..++||||+++|+|.+++.. ...+++..++.++.|++.                  |||++.++.+||+|||+++..
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccc
Confidence            9999999999999999999976 568999999999999986                  999999999999999999876


Q ss_pred             ccc----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHH
Q 039021          262 EQI----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       262 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ...    .....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||..... ........... ...+..+++.
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  249 (283)
T 3gen_A          171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYRPHLASEK  249 (283)
T ss_dssp             CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-CCCCTTCCHH
T ss_pred             cccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC-CCCCCcCCHH
Confidence            432    223347889999999998899999999999999999998 9999988763 22222222222 2233567999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +.+|+.+||+.||++|||+.+++++|+.+..
T Consensus       250 l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          250 VYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-40  Score=325.10  Aligned_cols=240  Identities=22%  Similarity=0.337  Sum_probs=202.1

Q ss_pred             cccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeec
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLG  196 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~  196 (464)
                      .+...+|.+.+.||+|+||.||+|++.         +..||+|+++...  .......+.+| ++++++ +||||+++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  142 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG  142 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence            334458999999999999999999974         2579999998652  34556778888 999999 9999999999


Q ss_pred             eeeeCCceEEEEEecCCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh------------------hh
Q 039021          197 SIVLGEEMILITEYLPKGNLKGILSKKV----------------RLDLPTALRYALDIAR------------------NL  242 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~------------------Ni  242 (464)
                      ++.+++..++||||+++|+|.+++....                .+++.+++.++.||+.                  ||
T Consensus       143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  222 (382)
T 3tt0_A          143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  222 (382)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceE
Confidence            9999999999999999999999997643                4999999999999987                  99


Q ss_pred             cccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-ch
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DF  315 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~  315 (464)
                      |++.++.+||+|||+++......     ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||..... +.
T Consensus       223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~  302 (382)
T 3tt0_A          223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  302 (382)
T ss_dssp             EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999998765322     23347889999999999999999999999999999999 9999988773 33


Q ss_pred             hccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          316 MHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      .........+.. +..+++++.+||.+||+.||++|||+.+++++|+.+......
T Consensus       303 ~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  356 (382)
T 3tt0_A          303 FKLLKEGHRMDK-PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN  356 (382)
T ss_dssp             HHHHHTTCCCCC-CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHcCCCCCC-CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            333333333333 366899999999999999999999999999999999765544

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=7.3e-41  Score=315.26  Aligned_cols=234  Identities=18%  Similarity=0.293  Sum_probs=196.2

Q ss_pred             cccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      +....+|++.+.||+|+||.||+|+++ +..||+|+++.....    ...+.+| .++++++||||+++++++.+.+..+
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIY   79 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             EechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceE
Confidence            445568999999999999999999986 568999999865332    2457888 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          206 LITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      +||||+++|+|.+++... ..+++..++.++.|++.                  |||++.++.+||+|||+++...... 
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  159 (268)
T 3sxs_A           80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY  159 (268)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred             EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence            999999999999999764 45999999999999986                  9999999999999999998665322 


Q ss_pred             ---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 ---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                         ....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||....................+..+++.+.+++.
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  239 (268)
T 3sxs_A          160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMY  239 (268)
T ss_dssp             EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred             hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHH
Confidence               23346778999999999899999999999999999999 99999887633222222222223333567999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +||+.||++|||+.+++++|+.+.
T Consensus       240 ~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          240 SCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             HHcCCChhhCcCHHHHHHHHHHhh
Confidence            999999999999999999998764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-40  Score=322.97  Aligned_cols=237  Identities=21%  Similarity=0.302  Sum_probs=200.5

Q ss_pred             ccccccccccccccccceeeeeEEeEEeC-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeecee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWRG-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSI  198 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~  198 (464)
                      +.....+|++.+.||+|+||.||+|++.+       +.||+|+++...  .....+.+.+| .++++++||||+++++++
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            34455689999999999999999999864       789999998643  24456778899 999999999999999999


Q ss_pred             eeCCceEEEEEecCCCChHHHHhhc------------------------cCCCHHHHHHHHHHHHh--------------
Q 039021          199 VLGEEMILITEYLPKGNLKGILSKK------------------------VRLDLPTALRYALDIAR--------------  240 (464)
Q Consensus       199 ~~~~~~~lv~E~~~~g~L~~~l~~~------------------------~~l~~~~~~~~~~qi~~--------------  240 (464)
                      .+.+..++||||+++|+|.+++...                        ..+++.+++.++.||++              
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999999999999763                        57999999999999987              


Q ss_pred             ----hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCC
Q 039021          241 ----NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTN  310 (464)
Q Consensus       241 ----Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~  310 (464)
                          |||++.++.+||+|||+++......     ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence                9999999999999999998765322     23348899999999999999999999999999999999 9999988


Q ss_pred             Ccc-chhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          311 NSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       311 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ... +....+..+..+.. +..+|+++.+||.+||+.||++|||+.+++++|+.+..
T Consensus       280 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          280 MAHEEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CChHHHHHHHhCCCcCCC-CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            763 33333333333333 36689999999999999999999999999999988743

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.8e-40  Score=326.25  Aligned_cols=238  Identities=19%  Similarity=0.313  Sum_probs=189.2

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      -++...+|.+.+.||+|+||.||+|+++     +..||+|+++...  .....+.+.+| .+|++++||||+++++++.+
T Consensus        40 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~  117 (373)
T 2qol_A           40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK  117 (373)
T ss_dssp             CBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             hhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence            3444558999999999999999999874     6789999998642  34556778899 99999999999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      .+..++||||+++|+|.++++.. ..+++.+++.++.||++                  |||++.++.+||+|||+++..
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            99999999999999999999765 47999999999999987                  999999999999999999877


Q ss_pred             cccCC------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCc
Q 039021          262 EQIHP------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       262 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~  333 (464)
                      .....      ...+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .+....+........ +..++
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~-~~~~~  276 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCP  276 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCC-CTTCB
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-Ccccc
Confidence            54321      1225778999999999999999999999999999998 999998776 333333322222222 35689


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +++.+||.+||+.||++||++.+|++.|+.+...
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999988654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-40  Score=325.09  Aligned_cols=234  Identities=19%  Similarity=0.237  Sum_probs=195.7

Q ss_pred             ccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..+|++.+.||+|+||+||+|++.       ++.||+|+++...  .......+.+| .++++++||||+++++++.+.+
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  147 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  147 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            347899999999999999999953       5689999997532  24445567888 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc-------cCCCHHHHHHHHHHHHh------------------hhcccCCC---ceeEec
Q 039021          203 EMILITEYLPKGNLKGILSKK-------VRLDLPTALRYALDIAR------------------NLLQDEGD---HLKIGE  254 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~------------------Nill~~~~---~~kl~D  254 (464)
                      ..++||||+++|+|.+++...       ..+++.+++.++.||++                  |||++.++   .+||+|
T Consensus       148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECC
Confidence            999999999999999999764       35899999999999987                  99999554   599999


Q ss_pred             chhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCc
Q 039021          255 YWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKF  327 (464)
Q Consensus       255 FG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~  327 (464)
                      ||+++......     ....||+.|+|||++.+..++.++|||||||++|||++ |..||..... +....+..+..+. 
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~-  306 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-  306 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC-
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence            99998765322     22347899999999999999999999999999999998 9999988773 3333333333333 


Q ss_pred             cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       328 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      .+..+++.+.+||.+||+.||++|||+.+|+++|+.+...
T Consensus       307 ~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          307 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            3366899999999999999999999999999999988653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4.4e-40  Score=331.33  Aligned_cols=231  Identities=17%  Similarity=0.135  Sum_probs=194.1

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+|.++  |+.||+|++...... ....+.+.+| .++++++||||+++++++.+.+..|+|
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            346999999999999999999984  889999999875433 3445678889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc---CCCceeEecchhhhhhcccC-
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD---EGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~---~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ||||+||+|.+++..++.+++.++..++.||+.                  |||++   .++.+||+|||+++...... 
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~  168 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ  168 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence            999999999999998889999999999999987                  99998   45789999999998765432 


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCcc---CCCCcHHHHHHH
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ---ISRCPNRLKQLI  340 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li  340 (464)
                        ....||+.|+|||++.+..|+.++|||||||++|+|++|..||.+................++   ...+++++.+||
T Consensus       169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  248 (444)
T 3soa_A          169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI  248 (444)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred             eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHH
Confidence              345699999999999999999999999999999999999999988763222222211122222   146899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||+.||++|||+.++++|.+
T Consensus       249 ~~~L~~dP~~Rpta~e~L~hp~  270 (444)
T 3soa_A          249 NKMLTINPSKRITAAEALKHPW  270 (444)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSCT
T ss_pred             HHHcCCChhHCCCHHHHhcCcc
Confidence            9999999999999999999854

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.7e-40  Score=320.55  Aligned_cols=231  Identities=19%  Similarity=0.194  Sum_probs=194.2

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ...|.+.+.||+|+||.||+|+++  |+.||+|++........   ...+.+.+| .+|++++||||+++++++.+.+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            346999999999999999999985  88999999986543211   124568889 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC----ceeEecchhhhhhc
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD----HLKIGEYWVQMFYE  262 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~----~~kl~DFG~a~~~~  262 (464)
                      ++||||+++|+|.+++...+.+++.++..++.|++.                  |||++.++    .+||+|||+++...
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence            999999999999999988889999999999999987                  99998887    79999999998765


Q ss_pred             cc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCcc---CCCCcHHH
Q 039021          263 QI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQ---ISRCPNRL  336 (464)
Q Consensus       263 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~  336 (464)
                      ..  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+... +....... ....++   ...+++.+
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (326)
T 2y0a_A          170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA-VNYEFEDEYFSNTSALA  248 (326)
T ss_dssp             TTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH-TCCCCCHHHHTTSCHHH
T ss_pred             CCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh-cCCCcCccccccCCHHH
Confidence            32  2344599999999999999999999999999999999999999987662 22222211 111111   15678999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||.+||+.||++|||+.++++|.+
T Consensus       249 ~~li~~~L~~dP~~Rpt~~e~l~hp~  274 (326)
T 2y0a_A          249 KDFIRRLLVKDPKKRMTIQDSLQHPW  274 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCCC
Confidence            99999999999999999999999854

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=3.2e-40  Score=324.24  Aligned_cols=237  Identities=17%  Similarity=0.227  Sum_probs=195.6

Q ss_pred             cccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeecee
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSI  198 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~  198 (464)
                      ++...+|++.+.||+|+||.||+|++.       ++.||+|+++...  .....+.+.+| ++++++ +||||+++++++
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~   95 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC   95 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence            344558999999999999999999963       4789999998642  23445678889 999999 899999999999


Q ss_pred             eeCC-ceEEEEEecCCCChHHHHhhccC----------------------------------------------------
Q 039021          199 VLGE-EMILITEYLPKGNLKGILSKKVR----------------------------------------------------  225 (464)
Q Consensus       199 ~~~~-~~~lv~E~~~~g~L~~~l~~~~~----------------------------------------------------  225 (464)
                      .+.+ .+++||||+++|+|.+++.....                                                    
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            8754 48999999999999999976432                                                    


Q ss_pred             --------------CCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----CCC
Q 039021          226 --------------LDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQ  268 (464)
Q Consensus       226 --------------l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----~~~  268 (464)
                                    +++..++.++.|++.                  |||++.++.+||+|||+++......     ...
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  255 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA  255 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence                          899999999999987                  9999999999999999998764322     233


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchh-ccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFM-HLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      .||+.|+|||++.+..++.++|||||||++|||++ |..||.+.. .... ........... +..+++++.+++.+||+
T Consensus       256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~  334 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWH  334 (359)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC-CTTCCHHHHHHHHHHTC
T ss_pred             CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcc
Confidence            48899999999999999999999999999999998 999998866 2222 22222223333 35689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      .||++|||+.+++++|+.+...
T Consensus       335 ~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          335 GEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHHHHH
Confidence            9999999999999999988653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-40  Score=321.32  Aligned_cols=228  Identities=15%  Similarity=0.138  Sum_probs=193.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++...    ......+.+| .+|+.++||||+++++++.+.+.+++||
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence            36899999999999999999985  889999999753    2334567889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccC--CCceeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDE--GDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~--~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |||+||+|.+++... ..+++.++..++.|++.                  |||++.  ++.+||+|||+++......  
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            999999999999765 47999999999999987                  999987  7899999999998765332  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCcc---CCCCcHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQ---ISRCPNRLKQLIA  341 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~li~  341 (464)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+... +....+.. ....++   ...+|+++.+||.
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~~~~li~  239 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN-AEYTFDEEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-TCCCCCHHHHTTSCHHHHHHHH
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHc-CCCCCChhhhccCCHHHHHHHH
Confidence            233499999999999998899999999999999999999999988763 22222221 122222   1468999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||..||.+|||+.++++|.+..
T Consensus       240 ~~L~~dp~~Rpt~~e~l~hp~~~  262 (321)
T 1tki_A          240 RLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHcCCChhHCcCHHHHhcChhhc
Confidence            99999999999999999998754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.6e-40  Score=311.93  Aligned_cols=232  Identities=20%  Similarity=0.303  Sum_probs=182.1

Q ss_pred             ccccccccccccceeeeeEEeEEeCceEEEEEeeccCCch-HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHP-VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      -.+|++.+.||+|+||.||+|.+.++.||+|+++...... ....+.+.+| .+++.++||||+++++++.+.+..++||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            3478999999999999999999999999999997643222 2234668888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh---------------------hhcccC--------CCceeEecchhhh
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR---------------------NLLQDE--------GDHLKIGEYWVQM  259 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~---------------------Nill~~--------~~~~kl~DFG~a~  259 (464)
                      ||+++|+|.+++.. +.+++..+..++.|++.                     |||++.        ++.+||+|||+++
T Consensus        86 e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           86 EFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             ECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             EcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence            99999999999864 48999999999999986                     999986        6789999999998


Q ss_pred             hhcccC-CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCCCcHHHH
Q 039021          260 FYEQIH-PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLK  337 (464)
Q Consensus       260 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  337 (464)
                      ...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ..............+..+++++.
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (271)
T 3dtc_A          165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFA  244 (271)
T ss_dssp             -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHH
T ss_pred             ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHH
Confidence            765433 2345999999999999999999999999999999999999999887622 22222222222222366899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +++.+||+.||++|||+.+++++|+.
T Consensus       245 ~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          245 KLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            99999999999999999999999874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=5.6e-40  Score=316.32  Aligned_cols=238  Identities=20%  Similarity=0.351  Sum_probs=199.6

Q ss_pred             cccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          126 NFDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       126 ~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      .+.....+|.+.+.||+|+||.||+|.+.       +..||+|++....  .....+.+.+| +++++++||||++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   94 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGA   94 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEE
Confidence            34445568999999999999999999872       4789999998642  24556778889 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhcc------------------------CCCHHHHHHHHHHHHh-------------
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKKV------------------------RLDLPTALRYALDIAR-------------  240 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~~------------------------~l~~~~~~~~~~qi~~-------------  240 (464)
                      +.+.+..++||||+++|+|.+++....                        .+++.+++.++.|+++             
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            999999999999999999999997643                        3899999999999987             


Q ss_pred             -----hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCC
Q 039021          241 -----NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQT  309 (464)
Q Consensus       241 -----Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~  309 (464)
                           |||++.++.+||+|||+++......     ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  254 (314)
T 2ivs_A          175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP  254 (314)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                 9999999999999999998664322     23347889999999999999999999999999999999 999998


Q ss_pred             CCccchh-ccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          310 NNSFDFM-HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       310 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +...... ........+.. +..+++++.+|+.+||+.||++|||+.+++++|+.+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          255 GIPPERLFNLLKTGHRMER-PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             TCCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHhhcCCcCCC-CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            8763332 22223323333 36689999999999999999999999999999998754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.6e-40  Score=312.46  Aligned_cols=232  Identities=21%  Similarity=0.267  Sum_probs=195.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  +..||+|++.............+.+| .++++++||||+++++++.+.+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   88 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence            47999999999999999999985  77899999976433333335568888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-CCCc
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-PNQE  269 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-~~~~  269 (464)
                      ||+++|+|.+++.....+++..+..++.|++.                  |||++.++.+||+|||++....... ....
T Consensus        89 e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~  168 (279)
T 3fdn_A           89 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC  168 (279)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------C
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccC
Confidence            99999999999988889999999999999987                  9999999999999999987655332 3445


Q ss_pred             CCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCC
Q 039021          270 NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS  349 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  349 (464)
                      ||+.|+|||++.+..++.++||||||+++|+|++|..||..................++ ..+++.+.+||.+||+.||+
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~  247 (279)
T 3fdn_A          169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPS  247 (279)
T ss_dssp             CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-TTSCHHHHHHHHHHCCSSGG
T ss_pred             CCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC-CcCCHHHHHHHHHHhccChh
Confidence            99999999999999999999999999999999999999988763333222222233333 55899999999999999999


Q ss_pred             CCCCHHHHHHHHHHH
Q 039021          350 KRPTFAAVIITLEEV  364 (464)
Q Consensus       350 ~Rpt~~~i~~~l~~~  364 (464)
                      +|||+.++++|.+..
T Consensus       248 ~Rps~~e~l~h~~~~  262 (279)
T 3fdn_A          248 QRPMLREVLEHPWIT  262 (279)
T ss_dssp             GSCCHHHHHHCHHHH
T ss_pred             hCCCHHHHhhCcccc
Confidence            999999999997754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.6e-40  Score=326.52  Aligned_cols=230  Identities=15%  Similarity=0.165  Sum_probs=193.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|+++  ++.||+|++.............+.+| ++|+.++|||||+++++|.+.+.+|+||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            37999999999999999999985  78999999986433333345677889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~  268 (464)
                      ||+.||+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++.....  ....
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~  174 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM  174 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCC
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceecc
Confidence            99999999999998889999999999999987                  999999999999999999876533  2455


Q ss_pred             cCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc---cchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          269 ENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       269 ~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      +||+.|+|||++..   ..|+.++|||||||++|||++|+.||....   ..............++ ..+++++.+||.+
T Consensus       175 ~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p-~~~s~~~~~li~~  253 (384)
T 4fr4_A          175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP-SAWSQEMVSLLKK  253 (384)
T ss_dssp             CSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC-TTSCHHHHHHHHH
T ss_pred             CCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC-CcCCHHHHHHHHH
Confidence            69999999999964   468999999999999999999999997644   1111111222233333 5689999999999


Q ss_pred             HcccCCCCCCC-HHHHHHHHH
Q 039021          343 CTNKDPSKRPT-FAAVIITLE  362 (464)
Q Consensus       343 cl~~dp~~Rpt-~~~i~~~l~  362 (464)
                      ||+.||.+||+ +.+++.|.+
T Consensus       254 lL~~dP~~R~s~~~~l~~hp~  274 (384)
T 4fr4_A          254 LLEPNPDQRFSQLSDVQNFPY  274 (384)
T ss_dssp             HSCSSGGGSCCSHHHHHTSGG
T ss_pred             HhcCCHhHhcccHHHHHcChh
Confidence            99999999998 888887643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.3e-39  Score=313.57  Aligned_cols=240  Identities=20%  Similarity=0.306  Sum_probs=199.5

Q ss_pred             cccccccccccccccccceeeeeEEeEE-------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeec
Q 039021          126 NFDISELNTLHSSMVEQGVFGESQTAKW-------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLG  196 (464)
Q Consensus       126 ~i~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~  196 (464)
                      .+.....+|.+.+.||+|+||.||+|++       .++.||+|++....  .....+.+.+| .+++++ +||||+++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   94 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLG   94 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence            3444556899999999999999999986       25789999998643  23445678889 999999 9999999999


Q ss_pred             eeeeCCceEEEEEecCCCChHHHHhhcc------------------CCCHHHHHHHHHHHHh------------------
Q 039021          197 SIVLGEEMILITEYLPKGNLKGILSKKV------------------RLDLPTALRYALDIAR------------------  240 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~------------------~l~~~~~~~~~~qi~~------------------  240 (464)
                      ++.+++..++||||+++|+|.+++....                  .+++.+++.++.|+++                  
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  174 (313)
T 1t46_A           95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR  174 (313)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence            9999999999999999999999997643                  4899999999999987                  


Q ss_pred             hhcccCCCceeEecchhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-
Q 039021          241 NLLQDEGDHLKIGEYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-  313 (464)
Q Consensus       241 Nill~~~~~~kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-  313 (464)
                      |||++.++.+||+|||+++.......     ...||+.|+|||++.+..++.++||||||+++|+|++ |..||..... 
T Consensus       175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  254 (313)
T 1t46_A          175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (313)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence            99999999999999999987764322     2337889999999999999999999999999999999 9999987652 


Q ss_pred             chhcc-ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          314 DFMHL-KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       314 ~~~~~-~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      ..... ....... ..+..+++++.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus       255 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          255 SKFYKMIKEGFRM-LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hHHHHHhccCCCC-CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            22221 2222222 223568999999999999999999999999999999886543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-40  Score=335.25  Aligned_cols=231  Identities=20%  Similarity=0.236  Sum_probs=196.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+++.||+|+||.||+|++.  |+.||+|++.............+.+| .+|+.++||||+++++++.+.+.+|+|||
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E   96 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME   96 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            7999999999999999999984  89999999986432222345578889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--CCCCc
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--HPNQE  269 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--~~~~~  269 (464)
                      |+++|+|.+++..++.+++.+++.++.||+.                  |||++.++.+||+|||+++.....  ....+
T Consensus        97 ~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~  176 (476)
T 2y94_A           97 YVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC  176 (476)
T ss_dssp             CCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence            9999999999998889999999999999987                  999999999999999999876543  23456


Q ss_pred             CCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          270 NSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       270 gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      ||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+................. +..+++++.+||.+||+.||
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP  255 (476)
T 2y94_A          177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDP  255 (476)
T ss_dssp             SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSST
T ss_pred             CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCc
Confidence            9999999999988766 679999999999999999999998876333222222222222 25589999999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 039021          349 SKRPTFAAVIITLEEV  364 (464)
Q Consensus       349 ~~Rpt~~~i~~~l~~~  364 (464)
                      ++|||+.++++|.+..
T Consensus       256 ~~Rpt~~eil~hp~~~  271 (476)
T 2y94_A          256 MKRATIKDIREHEWFK  271 (476)
T ss_dssp             TTSCCHHHHHTCHHHH
T ss_pred             hhCcCHHHHHhCHHhh
Confidence            9999999999997654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.5e-40  Score=321.91  Aligned_cols=230  Identities=20%  Similarity=0.174  Sum_probs=189.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||+||+|+++  ++.||+|++.....  ....+.+.+| .+++.++||||+++++++.+++..++||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            37999999999999999999985  88999999975422  2334678889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----C
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----H  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----~  265 (464)
                      ||+++|+|.+++.....+++.++..++.|++.                  |||++.++.+||+|||+++.....     .
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  164 (323)
T 3tki_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (323)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence            99999999999988888999999999999987                  999999999999999999865422     2


Q ss_pred             CCCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccc--hhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......  .............+...+++++.+||.+
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHH
Confidence            34569999999999988765 67899999999999999999999876522  1111111111111225589999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||+.||++|||+.|+++|.+.
T Consensus       245 ~L~~dP~~R~t~~eil~h~~~  265 (323)
T 3tki_A          245 ILVENPSARITIPDIKKDRWY  265 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTT
T ss_pred             HccCChhhCcCHHHHhhChhh
Confidence            999999999999999988653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1e-39  Score=309.73  Aligned_cols=237  Identities=19%  Similarity=0.328  Sum_probs=187.8

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      +++...+|++.+.||+|+||.||+|.+.     +..||+|++...  ......+.+.+| .++++++||||+++++++. 
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   86 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   86 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence            3444558999999999999999999983     456999998754  234456678889 9999999999999999884 


Q ss_pred             CCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      .+..++||||+++|+|.+++... ..+++..++.++.|++.                  |||++.++.+||+|||+++..
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccccc
Confidence            56789999999999999999764 47999999999999986                  999999999999999999877


Q ss_pred             cccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHH
Q 039021          262 EQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       262 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ....    ....+|+.|+|||++.+..++.++||||||+++|||++ |..||.+.. .+....+........+ ..+|++
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~  245 (281)
T 1mp8_A          167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPT  245 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-TTCCHH
T ss_pred             CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC-CCCCHH
Confidence            5432    22337789999999998999999999999999999997 999998766 3333333333333333 668999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +.+++.+||+.||++|||+.+++++|+.+...
T Consensus       246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          246 LYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=313.57  Aligned_cols=230  Identities=22%  Similarity=0.332  Sum_probs=186.1

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      .+|++.+.||+|+||.||+|+++++.||+|.+...     ...+.+.+| +++++++||||+++++++.  +..++||||
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~   80 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY   80 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence            36889999999999999999999999999999752     335678889 9999999999999999887  458999999


Q ss_pred             cCCCChHHHHhhcc---CCCHHHHHHHHHHHHh---------------------hhcccCCCc-eeEecchhhhhhcccC
Q 039021          211 LPKGNLKGILSKKV---RLDLPTALRYALDIAR---------------------NLLQDEGDH-LKIGEYWVQMFYEQIH  265 (464)
Q Consensus       211 ~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~---------------------Nill~~~~~-~kl~DFG~a~~~~~~~  265 (464)
                      +++|+|.+++....   .+++..++.++.|+++                     |||++.++. +||+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~  160 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM  160 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence            99999999998654   4788999999999875                     999988886 7999999998776555


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ...........+... ..+|+.+.+++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~  239 (307)
T 2eva_A          161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI-KNLPKPIESLMTR  239 (307)
T ss_dssp             ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCB-TTCCHHHHHHHHH
T ss_pred             ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcc-cccCHHHHHHHHH
Confidence            556799999999999999999999999999999999999999986542   122222222333333 5689999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          343 CTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      ||+.||++|||+.+++++|+.+...+.
T Consensus       240 ~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          240 CWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            999999999999999999999865554

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.2e-40  Score=325.19  Aligned_cols=230  Identities=17%  Similarity=0.197  Sum_probs=187.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HH-HHhcCCCceeeeeceeeeCCceEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CK-LRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~-l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ..+|++.+.||+|+||+||+|+++  ++.||+|++++...........+..| .+ ++.++||||+++++++.+.+.+|+
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            347999999999999999999985  78999999987654444445556666 55 577899999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IH  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~  265 (464)
                      ||||++||+|.+++.+.+.+++..++.++.||+.                  |||++.+|.+||+|||+++....   ..
T Consensus       117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~  196 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT  196 (373)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCcc
Confidence            9999999999999998889999999999999986                  99999999999999999987542   23


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ...+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+.......+......++ ..+++++.+||.+||+
T Consensus       197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~lL~  275 (373)
T 2r5t_A          197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK-PNITNSARHLLEGLLQ  275 (373)
T ss_dssp             CSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC-SSSCHHHHHHHHHHTC
T ss_pred             ccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHcc
Confidence            345699999999999999999999999999999999999999988773333332222333443 5689999999999999


Q ss_pred             cCCCCCCCH----HHHHHHH
Q 039021          346 KDPSKRPTF----AAVIITL  361 (464)
Q Consensus       346 ~dp~~Rpt~----~~i~~~l  361 (464)
                      .||.+||++    .++++|.
T Consensus       276 ~dp~~R~~~~~~~~~i~~h~  295 (373)
T 2r5t_A          276 KDRTKRLGAKDDFMEIKSHV  295 (373)
T ss_dssp             SSGGGSTTTTTTHHHHHTSG
T ss_pred             cCHHhCCCCCCCHHHHhCCc
Confidence            999999987    4666654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4e-40  Score=318.87  Aligned_cols=239  Identities=18%  Similarity=0.231  Sum_probs=189.8

Q ss_pred             CccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..++.+...+|++.+.||+|+||+||+|+++++.||+|++...    .........| .++++++||||+++++++.+..
T Consensus        16 ~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           16 TENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT   91 (322)
T ss_dssp             CCCEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             ccccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCC
Confidence            3345556668999999999999999999999999999999753    2233345557 8899999999999999998754


Q ss_pred             ----ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh----------------------------hhcccCCCce
Q 039021          203 ----EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR----------------------------NLLQDEGDHL  250 (464)
Q Consensus       203 ----~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~----------------------------Nill~~~~~~  250 (464)
                          .+++||||+++|+|.++++.+ .+++..+..++.|+++                            |||++.++.+
T Consensus        92 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~  170 (322)
T 3soc_A           92 SVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA  170 (322)
T ss_dssp             SSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred             CCCceEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence                379999999999999999764 6999999999999975                            9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccC-----CCCCcccchhHHHHHHHHHhCCCCCCCCccch-----
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNV-----LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-----  315 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-----  315 (464)
                      ||+|||+++......     ....||+.|+|||++.+.     .++.++|||||||++|||++|+.||.+.....     
T Consensus       171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~  250 (322)
T 3soc_A          171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE  250 (322)
T ss_dssp             EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred             EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence            999999998765322     224599999999999863     45678999999999999999999997643110     


Q ss_pred             ------------hcccc-ccCCCCc----cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          316 ------------MHLKS-VNFEPKF----QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       316 ------------~~~~~-~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                                  ..... ....+..    .....++++.+||.+||+.||++|||+.++++.|+.+.+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                        00000 1111111    1122456799999999999999999999999999988653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=4.1e-39  Score=309.96  Aligned_cols=238  Identities=19%  Similarity=0.283  Sum_probs=189.2

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|.+  +|+.||+|++.............+.+| .++++++||||+++++++.+.+..++|||
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence            699999999999999999998  488999999986544455667788889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          210 YLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |+++|+|.+++..    ...+++..++.++.|+++                  ||+++.++.+||+|||+++......  
T Consensus       113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  192 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  192 (310)
T ss_dssp             CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred             cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence            9999999999964    467999999999999987                  9999999999999999998765432  


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc---chhccccccCCCCccCCCCcHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF---DFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                       ....|++.|+|||++.+..++.++||||||+++|+|++|..||.+...   ...........+..+...+++++.+||.
T Consensus       193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  272 (310)
T 2wqm_A          193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN  272 (310)
T ss_dssp             ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHH
T ss_pred             ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHH
Confidence             233589999999999999999999999999999999999999976542   2222222222333333568999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      +||+.||++|||+.++++.|+.+......
T Consensus       273 ~~l~~dp~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          273 MCINPDPEKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999765553

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-39  Score=318.18  Aligned_cols=236  Identities=20%  Similarity=0.238  Sum_probs=193.1

Q ss_pred             ccccccccccccccceeeeeEEeEE-------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW-------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIV  199 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~  199 (464)
                      +...+|.+.+.||+|+||.||+|++       .+..||+|++....  .....+.+.+| .+++++ +||||+++++++.
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            3445799999999999999999997       25689999998542  23445678889 999999 9999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhhcc-----------------------CCCHHHHHHHHHHHHh----------------
Q 039021          200 LGEEMILITEYLPKGNLKGILSKKV-----------------------RLDLPTALRYALDIAR----------------  240 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~~~-----------------------~l~~~~~~~~~~qi~~----------------  240 (464)
                      ..+..++||||+++|+|.+++....                       .+++..++.++.||+.                
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  199 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  199 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999999999997642                       3799999999999987                


Q ss_pred             --hhcccCCCceeEecchhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc
Q 039021          241 --NLLQDEGDHLKIGEYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS  312 (464)
Q Consensus       241 --Nill~~~~~~kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~  312 (464)
                        |||++.++.+||+|||+++.......     ...||+.|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence              99999999999999999987654322     2337889999999999999999999999999999998 999998866


Q ss_pred             c-chh-ccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          313 F-DFM-HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       313 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      . ... ........+.. +..+++++.+||.+||+.||.+|||+.+++++|+.+...
T Consensus       280 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          280 VDANFYKLIQNGFKMDQ-PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             CSHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             cHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            2 222 22222223332 356899999999999999999999999999999988543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1e-39  Score=316.63  Aligned_cols=231  Identities=18%  Similarity=0.176  Sum_probs=185.8

Q ss_pred             ccccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCc-hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYH-PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      ..+|++.+.||+|+||.||+|++     .++.||+|+++..... .......+.+| .+|++++||||+++++++.+.+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            34799999999999999999997     3789999999865322 22344567788 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-  264 (464)
                      +|+||||+++|+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+++..... 
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence            9999999999999999988889999999999999986                  999999999999999999864422 


Q ss_pred             --CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          265 --HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       265 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                        .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+................++ ..+++++.+||.+
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~  254 (327)
T 3a62_A          176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP-PYLTQEARDLLKK  254 (327)
T ss_dssp             ---CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC-TTSCHHHHHHHHH
T ss_pred             ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-CCCCHHHHHHHHH
Confidence              2345699999999999999999999999999999999999999988763222222222233333 5689999999999


Q ss_pred             HcccCCCCCC-----CHHHHHHHHH
Q 039021          343 CTNKDPSKRP-----TFAAVIITLE  362 (464)
Q Consensus       343 cl~~dp~~Rp-----t~~~i~~~l~  362 (464)
                      ||+.||++||     ++.++++|.+
T Consensus       255 ~L~~dp~~R~~~~~~~~~e~l~hp~  279 (327)
T 3a62_A          255 LLKRNAASRLGAGPGDAGEVQAHPF  279 (327)
T ss_dssp             HSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred             HHhcCHhhccCCCCCCHHHHHcCCc
Confidence            9999999999     7889999865

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.4e-40  Score=321.73  Aligned_cols=233  Identities=14%  Similarity=0.122  Sum_probs=191.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCch--HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP--VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~--~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++.......  ....+.+.+| .++++++||||+++++++.+.+.+|+
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            46999999999999999999984  8899999997532110  1124568889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCCCc---eeEecchhhhhh
Q 039021          207 ITEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEGDH---LKIGEYWVQMFY  261 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~~~---~kl~DFG~a~~~  261 (464)
                      |||||+||+|.+++...    ..+++..+..++.||+.                  |||++.++.   +||+|||+++..
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            99999999999888543    35899999999999987                  999987654   999999999876


Q ss_pred             cccC---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCc--cCCCCcHHH
Q 039021          262 EQIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF--QISRCPNRL  336 (464)
Q Consensus       262 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  336 (464)
                      ....   ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+........+........  ....+++++
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  263 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESA  263 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccCCHHH
Confidence            6432   24459999999999999999999999999999999999999998865333332222211111  114689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+||.+||+.||++|||+.++++|.+..
T Consensus       264 ~~li~~~L~~dP~~R~s~~e~l~hp~~~  291 (351)
T 3c0i_A          264 KDLVRRMLMLDPAERITVYEALNHPWLK  291 (351)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence            9999999999999999999999987654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=7.8e-40  Score=312.69  Aligned_cols=236  Identities=21%  Similarity=0.374  Sum_probs=191.6

Q ss_pred             ccccccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      +...+|++.+.||+|+||.||+|++      .++.||+|++...   .....+.+.+| +++++++||||+++++++...
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   83 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA   83 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            3455799999999999999999985      3789999999863   34556778899 999999999999999998653


Q ss_pred             --CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          202 --EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       202 --~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                        ..+++||||+++|+|.+++... ..+++..++.++.|++.                  |||++.++.+||+|||+++.
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence              5689999999999999999764 45999999999999986                  99999999999999999987


Q ss_pred             hcccC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-----------------hc
Q 039021          261 YEQIH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-----------------MH  317 (464)
Q Consensus       261 ~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-----------------~~  317 (464)
                      .....      ....++..|+|||++.+..++.++||||||+++|||++|..||.......                 ..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            65332      12337788999999999999999999999999999999999987543111                 11


Q ss_pred             cccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .......... +..+|+++.+||.+||+.||++|||+.++++.|+.+...+
T Consensus       244 ~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          244 LLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHHTTCCCCC-CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHhccCcCCC-CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            1112222232 3668999999999999999999999999999999886543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-39  Score=320.32  Aligned_cols=231  Identities=18%  Similarity=0.151  Sum_probs=182.4

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||+|+++  ++.||+|++......    ...+.+| .++++++||||+++++++.+.+.+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence            3457999999999999999999984  889999999864322    2457788 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCc--eeEecchhhhhhcc--c
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDH--LKIGEYWVQMFYEQ--I  264 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~--~kl~DFG~a~~~~~--~  264 (464)
                      ||||+++|+|.+++...+.+++..+..++.|++.                  |||++.++.  +||+|||+++....  .
T Consensus        94 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~  173 (361)
T 3uc3_A           94 IMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ  173 (361)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence            9999999999999988889999999999999987                  999987765  99999999985432  2


Q ss_pred             CCCCcCCCCcccccccccCCCCCc-ccchhHHHHHHHHHhCCCCCCCCcc-chh-c--cccccCCCCcc-CCCCcHHHHH
Q 039021          265 HPNQENSQRNDNSSIASNVLDDTK-KDICSFGYIFYQMLEGKHLQTNNSF-DFM-H--LKSVNFEPKFQ-ISRCPNRLKQ  338 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~el~~g~~p~~~~~~-~~~-~--~~~~~~~~~~~-~~~~~~~~~~  338 (464)
                      .....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+... ... .  .........++ ...+++++.+
T Consensus       174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  253 (361)
T 3uc3_A          174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH  253 (361)
T ss_dssp             -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred             CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence            234459999999999988887755 8999999999999999999987541 111 1  11111122222 1357999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||.+||+.||++|||+.++++|.+..
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          254 LISRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHhCcchh
Confidence            99999999999999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.5e-39  Score=329.59  Aligned_cols=231  Identities=20%  Similarity=0.324  Sum_probs=195.4

Q ss_pred             cccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+...+|.+.+.||+|+||+||+|.++ +..||+|+++....    ..+.+.+| ++|++++|||||++++++. .+..+
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~  258 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY  258 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence            334457889999999999999999996 77899999986432    24578889 9999999999999999986 66789


Q ss_pred             EEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-
Q 039021          206 LITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-  264 (464)
                      |||||+++|+|.++++..  ..+++..++.++.||++                  |||++.++.+||+|||+++..... 
T Consensus       259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~  338 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  338 (454)
T ss_dssp             EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence            999999999999999754  47899999999999987                  999999999999999999876532 


Q ss_pred             ---CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHH
Q 039021          265 ---HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                         .....+++.|+|||++....++.++|||||||++|||++ |+.||.+.. .+....+..+.+.+.+ ..+|+++.+|
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~l  417 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP-ENCPEELYNI  417 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCC-TTSCHHHHHH
T ss_pred             eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHH
Confidence               223347889999999998999999999999999999999 999998876 3333333333343333 6689999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      |.+||+.||++|||+.+|++.|+.+
T Consensus       418 i~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          418 MMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHccCChhHCcCHHHHHHHHHHH
Confidence            9999999999999999999998866

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=9.4e-40  Score=309.42  Aligned_cols=230  Identities=21%  Similarity=0.354  Sum_probs=187.5

Q ss_pred             ccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-CceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-EEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|.++|+.||+|+++...     ..+.+.+| .++++++||||+++++++.+. +..++||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            4479999999999999999999999999999998632     34567888 999999999999999987654 5789999


Q ss_pred             EecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCC
Q 039021          209 EYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~  268 (464)
                      ||+++|+|.+++...+  .+++..+..++.|++.                  ||+++.++.+||+|||+++.........
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  174 (278)
T 1byg_A           95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  174 (278)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence            9999999999997653  3899999999999986                  9999999999999999998776655556


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      .+++.|+|||++.+..++.++||||||+++|+|++ |..||..... +..........+.. +..+|+++.++|.+||+.
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~  253 (278)
T 1byg_A          175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMKNCWHL  253 (278)
T ss_dssp             -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCC-CTTCCHHHHHHHHHHTCS
T ss_pred             CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC-cccCCHHHHHHHHHHhcC
Confidence            68999999999999999999999999999999998 9999988763 33333333333333 366899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ||++|||+.++++.|+.+..
T Consensus       254 ~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          254 DAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCCCHHHHHHHHHHHHh
Confidence            99999999999999998854

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.7e-39  Score=317.66  Aligned_cols=231  Identities=18%  Similarity=0.184  Sum_probs=196.7

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|...+.||+|+||.||+|++  .++.||+|++...........+.+.+| +++++++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588899999999999999997  488999999987654555666788899 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCc
Q 039021          209 EYLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQE  269 (464)
Q Consensus       209 E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~  269 (464)
                      ||+. |+|.+++. ....+++.++..++.|+++                  |||++.++.+||+|||+++..... ....
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~~  211 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSFV  211 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCCC
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-Cccc
Confidence            9998 58888885 3568999999999999986                  999999999999999999876543 3456


Q ss_pred             CCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          270 NSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       270 gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ||+.|+|||++.   +..++.++|||||||++|||++|+.||.... ............+......+++.+.+||.+||+
T Consensus       212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  291 (348)
T 1u5q_A          212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ  291 (348)
T ss_dssp             SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            999999999984   5678999999999999999999999998776 333333333334444446689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .||++|||+.++++|.+..
T Consensus       292 ~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          292 KIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             SSGGGSCCHHHHTTCHHHH
T ss_pred             cChhhCcCHHHHhhChhhh
Confidence            9999999999999997754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.6e-40  Score=315.75  Aligned_cols=231  Identities=15%  Similarity=0.151  Sum_probs=187.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc----e
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE----M  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~----~  204 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++.............+.+| .++++++||||+++++++.....    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            47999999999999999999983  88999999987655556667788899 99999999999999999987554    4


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      |+||||+++|+|.+++...+.+++.+++.++.|++.                  |||++.++.+||+|||+++...... 
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  171 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN  171 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--------
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccc
Confidence            999999999999999998889999999999999987                  9999999999999999998765322 


Q ss_pred             -----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccCC--CCccCCCCcHHHH
Q 039021          266 -----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNFE--PKFQISRCPNRLK  337 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~  337 (464)
                           ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... .........  +......+++++.
T Consensus       172 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  251 (311)
T 3ork_A          172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD  251 (311)
T ss_dssp             ----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHH
T ss_pred             ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHH
Confidence                 12348999999999999999999999999999999999999998876322 222211111  1112255899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||.+||+.||++||+..+++.+-+
T Consensus       252 ~li~~~l~~dP~~R~~~~~~l~~~l  276 (311)
T 3ork_A          252 AVVLKALAKNPENRYQTAAEMRADL  276 (311)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHHHhcCHhhChhhHHHHHHHH
Confidence            9999999999999998877776643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=2.9e-39  Score=304.44  Aligned_cols=230  Identities=23%  Similarity=0.381  Sum_probs=193.6

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--CceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|+++++.||+|++...... ....+.+.+| .++++++||||+++++++.+.  +..++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            37889999999999999999999999999999875433 3445678899 999999999999999999887  7889999


Q ss_pred             EecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh--------------------hhcccCCCceeEecchhhhhhcccCC
Q 039021          209 EYLPKGNLKGILSKKV--RLDLPTALRYALDIAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~--------------------Nill~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      ||+++|+|.+++....  .+++.+++.++.|++.                    |||++.++.+||+|||++....  ..
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--~~  166 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--SP  166 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--CT
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec--cc
Confidence            9999999999998754  5899999999999986                    9999999999999998876533  23


Q ss_pred             CCcCCCCcccccccccCCCCC---cccchhHHHHHHHHHhCCCCCCCCcc-chhcccc-ccCCCCccCCCCcHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDT---KKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS-VNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~li~  341 (464)
                      ...||+.|+|||++.+..++.   ++|||||||++|||++|+.||..... ....... ....+..+ ..+++++.+++.
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~  245 (271)
T 3kmu_A          167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP-PGISPHVSKLMK  245 (271)
T ss_dssp             TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCC-TTCCHHHHHHHH
T ss_pred             CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCC-CCCCHHHHHHHH
Confidence            456899999999998766554   79999999999999999999988762 2222222 22233333 668999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +||+.||++|||+.++++.|+.+.
T Consensus       246 ~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          246 ICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHcCCChhhCcCHHHHHHHHHHhh
Confidence            999999999999999999998773

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=8.5e-40  Score=334.57  Aligned_cols=235  Identities=19%  Similarity=0.336  Sum_probs=197.6

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV  199 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~  199 (464)
                      ..|++.  ..+|++.+.||+|+||.||+|.++  +..||+|+++....    ..+.+.+| .+|++++|||||++++++.
T Consensus       213 ~~~~~~--~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~  286 (495)
T 1opk_A          213 DKWEME--RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCT  286 (495)
T ss_dssp             SCCBCC--GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccccC--HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            344444  447888999999999999999996  78999999986432    24568889 9999999999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          200 LGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      +.+.++|||||+++|+|.++++..  ..+++..++.++.||++                  |||++.++.+||+|||+++
T Consensus       287 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  366 (495)
T 1opk_A          287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR  366 (495)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccce
Confidence            999999999999999999999753  56899999999999987                  9999999999999999998


Q ss_pred             hhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCc
Q 039021          260 FYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       260 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~  333 (464)
                      ......    ....+++.|+|||++.+..++.++|||||||++|||++ |..||.+... +.........+... +..+|
T Consensus       367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~  445 (495)
T 1opk_A          367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCP  445 (495)
T ss_dssp             CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC-CTTCC
T ss_pred             eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCC
Confidence            765322    22336789999999999999999999999999999999 9999988763 33333333333333 36689


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +++.+||.+||+.||++|||+.+|++.|+.+
T Consensus       446 ~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          446 EKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            9999999999999999999999999998765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-39  Score=319.70  Aligned_cols=247  Identities=16%  Similarity=0.273  Sum_probs=194.5

Q ss_pred             CCCCccccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeee
Q 039021          121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQF  194 (464)
Q Consensus       121 ~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~  194 (464)
                      ....+.+......|.+.+.||+|+||.||+|.+.     +..||+|.++..  ......+.+.+| .++++++||||+++
T Consensus        78 ~~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~  155 (373)
T 3c1x_A           78 AVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSL  155 (373)
T ss_dssp             TTTTTBCCSTTEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCC
T ss_pred             hccccccChhhceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            3445566667778999999999999999999974     246899998753  223456778889 99999999999999


Q ss_pred             eceeee-CCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEec
Q 039021          195 LGSIVL-GEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGE  254 (464)
Q Consensus       195 ~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~D  254 (464)
                      ++++.+ .+..++||||+++|+|.++++.. ..+++.+++.++.||++                  |||++.++.+||+|
T Consensus       156 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~D  235 (373)
T 3c1x_A          156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD  235 (373)
T ss_dssp             CEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECC
T ss_pred             EEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEee
Confidence            998754 56789999999999999999764 56899999999999986                  99999999999999


Q ss_pred             chhhhhhcccC-------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCC
Q 039021          255 YWVQMFYEQIH-------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEP  325 (464)
Q Consensus       255 FG~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~  325 (464)
                      ||+++......       ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.... .+.......+..+
T Consensus       236 FG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~  315 (373)
T 3c1x_A          236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL  315 (373)
T ss_dssp             C---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCC
T ss_pred             ccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCC
Confidence            99998764322       22337889999999999999999999999999999999 788887765 3333333333232


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                       ..+..+|+++.++|.+||+.||++|||+.+++++|+.+...+..
T Consensus       316 -~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~  359 (373)
T 3c1x_A          316 -LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  359 (373)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence             23366899999999999999999999999999999998765553

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=317.87  Aligned_cols=228  Identities=18%  Similarity=0.075  Sum_probs=177.9

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||+|+++  ++.||+|++...     ...+.+.+| .+|++++||||+++++++.+.+..++
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  125 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL  125 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-----hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence            3446999999999999999999995  778999999863     234567889 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccC---CCceeEecchhhhhhcccC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDE---GDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl~DFG~a~~~~~~~  265 (464)
                      ||||+++|+|.+++...+.+++.++..++.|++.                  |||++.   ++.+||+|||+++......
T Consensus       126 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  205 (349)
T 2w4o_A          126 VLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV  205 (349)
T ss_dssp             EECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred             EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence            9999999999999998888999999999999987                  999975   7899999999998765432


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-c-hhccccccCCC--CccCCCCcHHHHHH
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-D-FMHLKSVNFEP--KFQISRCPNRLKQL  339 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~-~~~~~~~~~~~--~~~~~~~~~~~~~l  339 (464)
                        ....||+.|+|||++.+..++.++|||||||++|||++|..||..... . ....+......  ......+++++.+|
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  285 (349)
T 2w4o_A          206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL  285 (349)
T ss_dssp             -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHH
T ss_pred             ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHH
Confidence              344599999999999999999999999999999999999999977652 2 22222111111  11114589999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      |.+||+.||++|||+.++++|.+
T Consensus       286 i~~~L~~dP~~Rpt~~e~l~hp~  308 (349)
T 2w4o_A          286 VRKLIVLDPKKRLTTFQALQHPW  308 (349)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHccCChhhCcCHHHHhcCcc
Confidence            99999999999999999998854

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.5e-40  Score=331.16  Aligned_cols=235  Identities=15%  Similarity=0.152  Sum_probs=193.8

Q ss_pred             cccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      .....+|++.+.||+|+||+||+|+++  ++.||+|++++...........+.+| .+++.++|||||+++++|.+.+.+
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~  144 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  144 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence            334457999999999999999999985  88999999986322222223457788 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--  264 (464)
                      |||||||+||+|.++++.. .+++..+..++.||+.                  |||++.++.+||+|||+|+.....  
T Consensus       145 ~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             EEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred             EEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence            9999999999999999764 7999999999999986                  999999999999999999876532  


Q ss_pred             --CCCCcCCCCcccccccccCC----CCCcccchhHHHHHHHHHhCCCCCCCCccc-hhcccccc-CCCCccC-CCCcHH
Q 039021          265 --HPNQENSQRNDNSSIASNVL----DDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVN-FEPKFQI-SRCPNR  335 (464)
Q Consensus       265 --~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~  335 (464)
                        ....+||+.|+|||++.+..    |+.++|||||||++|||++|+.||.+.+.. ....+... ....++. ..++++
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~  303 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE  303 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHH
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHH
Confidence              23566999999999998765    789999999999999999999999887732 22222211 1122222 458999


Q ss_pred             HHHHHHHHcccCCCC--CCCHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSK--RPTFAAVIITLEE  363 (464)
Q Consensus       336 ~~~li~~cl~~dp~~--Rpt~~~i~~~l~~  363 (464)
                      +.+||.+||..+|.+  ||++.+|++|.+.
T Consensus       304 ~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f  333 (410)
T 3v8s_A          304 AKNLICAFLTDREVRLGRNGVEEIKRHLFF  333 (410)
T ss_dssp             HHHHHHHHSSCGGGCTTSSCHHHHHTSGGG
T ss_pred             HHHHHHHHccChhhhCCCCCHHHHhcCccc
Confidence            999999999999988  9999999999764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.5e-39  Score=314.57  Aligned_cols=227  Identities=18%  Similarity=0.217  Sum_probs=191.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|...+.||+|+||.||+|++.  |+.||+|++.....   ...+.+.+| .++++++||||+++++++...+..++|||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  122 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME  122 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            4666779999999999999984  89999999986432   234567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++|+|.+++.. ..+++..+..++.|++.                  |||++.++.+||+|||+++......   ...
T Consensus       123 ~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~  201 (321)
T 2c30_A          123 FLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  201 (321)
T ss_dssp             CCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             cCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence            9999999999875 47999999999999986                  9999999999999999998765432   334


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~  346 (464)
                      .||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .+..........+... ...+++++.+||.+||+.
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  281 (321)
T 2c30_A          202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR  281 (321)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCS
T ss_pred             cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccC
Confidence            59999999999999999999999999999999999999998766 2332222222222221 245789999999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEE  363 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~  363 (464)
                      ||++|||+.++++|.+.
T Consensus       282 dp~~Rps~~ell~hp~~  298 (321)
T 2c30_A          282 DPQERATAQELLDHPFL  298 (321)
T ss_dssp             STTTSCCHHHHHTSGGG
T ss_pred             ChhhCcCHHHHhcChhh
Confidence            99999999999998654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.4e-39  Score=314.12  Aligned_cols=233  Identities=17%  Similarity=0.272  Sum_probs=188.5

Q ss_pred             cccccccccccccceeeeeEEeEEe--Cce----EEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTW----VVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~----vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ...+|++.+.||+|+||.||+|++.  ++.    ||+|.+....  .......+.+| .++++++||||+++++++.++.
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   90 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence            3457999999999999999999983  443    5777776432  23345678889 9999999999999999998754


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                       .++|+||+.+|+|.+++.. ...+++..++.++.|+++                  |||++.++.+||+|||+|+....
T Consensus        91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred             -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence             7899999999999999976 467999999999999987                  99999999999999999998764


Q ss_pred             cCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchh-ccccccCCCCccCCCCcHHH
Q 039021          264 IHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFM-HLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       264 ~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ...     ...+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+...... ........... +..++.++
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  248 (327)
T 3poz_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-PPICTIDV  248 (327)
T ss_dssp             TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-CTTBCHHH
T ss_pred             CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC-CccCCHHH
Confidence            322     2236889999999999999999999999999999999 9999988763333 22223323332 35689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+++.+||+.||++|||+.+++++|+.+..
T Consensus       249 ~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          249 YMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999988754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.8e-40  Score=333.28  Aligned_cols=230  Identities=18%  Similarity=0.194  Sum_probs=188.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|+++  |+.||+|++.............+.+| .+++.++||||+++++++.+.+.++|||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            47999999999999999999984  88999999986533334455667788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcc---cCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHP  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~---~~~  266 (464)
                      ||+++|+|.+++...+.+++..+..++.||+.                   |||++.++.+||+|||+|+....   ...
T Consensus       228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  307 (446)
T 4ejn_A          228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK  307 (446)
T ss_dssp             CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----C
T ss_pred             eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccc
Confidence            99999999999988889999999999999986                   99999999999999999986432   223


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ...||+.|+|||++.+..|+.++|||||||++|||++|+.||.+................++ ..+++++.+||.+||+.
T Consensus       308 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~li~~~L~~  386 (446)
T 4ejn_A          308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP-RTLGPEAKSLLSGLLKK  386 (446)
T ss_dssp             CSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCS
T ss_pred             cccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC-ccCCHHHHHHHHHHccc
Confidence            45699999999999999999999999999999999999999988773332222222233333 56899999999999999


Q ss_pred             CCCCCC-----CHHHHHHHHH
Q 039021          347 DPSKRP-----TFAAVIITLE  362 (464)
Q Consensus       347 dp~~Rp-----t~~~i~~~l~  362 (464)
                      ||.+||     |+.++++|.+
T Consensus       387 dP~~R~~~~~~t~~ell~hp~  407 (446)
T 4ejn_A          387 DPKQRLGGGSEDAKEIMQHRF  407 (446)
T ss_dssp             STTTSTTCSTTTHHHHHTSGG
T ss_pred             CHHHhCCCCCCCHHHHHhCcc
Confidence            999999     9999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=2.8e-39  Score=314.52  Aligned_cols=240  Identities=19%  Similarity=0.323  Sum_probs=199.6

Q ss_pred             cccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeec
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLG  196 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~  196 (464)
                      .....+|++.+.||+|+||.||+|++.         +..||+|++....  .......+.+| .+++++ +||||+++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  108 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG  108 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence            334458999999999999999999862         5689999998643  24456678889 999999 9999999999


Q ss_pred             eeeeCCceEEEEEecCCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh------------------hh
Q 039021          197 SIVLGEEMILITEYLPKGNLKGILSKKV----------------RLDLPTALRYALDIAR------------------NL  242 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~------------------Ni  242 (464)
                      ++.+.+.+++||||+++|+|.+++....                .+++.+++.++.||+.                  ||
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  188 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence            9999999999999999999999997643                3899999999999987                  99


Q ss_pred             cccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-h
Q 039021          243 LQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-F  315 (464)
Q Consensus       243 ll~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~  315 (464)
                      |++.++.+||+|||+++......     ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.... .
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  268 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  268 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence            99999999999999998765322     23347889999999998899999999999999999999 99999887633 2


Q ss_pred             hccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          316 MHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      .........+.. +..+++++.++|.+||+.||.+|||+.+++++|+.+......
T Consensus       269 ~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~  322 (334)
T 2pvf_A          269 FKLLKEGHRMDK-PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  322 (334)
T ss_dssp             HHHHHHTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHhcCCCCCC-CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence            222222223333 356899999999999999999999999999999998765543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-39  Score=312.12  Aligned_cols=239  Identities=21%  Similarity=0.302  Sum_probs=194.1

Q ss_pred             cccccccccccccccceeeeeEEeEEe------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      ++...+|.+.+.||+|+||.||+|.++      +..||+|+++...  .......+.+| .++++++||||+++++++.+
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK  117 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            444557888999999999999999975      2359999998643  24455678889 99999999999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      .+..++||||+++|+|.+++... +.+++.+++.++.|+++                  |||++.++.+||+|||+++..
T Consensus       118 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            99999999999999999999764 67999999999999986                  999999999999999999876


Q ss_pred             cccCC------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCc
Q 039021          262 EQIHP------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       262 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~  333 (464)
                      .....      ...+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .+....+.....+.. +..++
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~  276 (333)
T 1mqb_A          198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT-PMDCP  276 (333)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-CTTCB
T ss_pred             ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC-cccCC
Confidence            53321      1236788999999999999999999999999999999 999998776 333333333333333 25689


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      +++.+++.+||+.||++||++.+++++|+.+.....
T Consensus       277 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          277 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            999999999999999999999999999998865443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=3.1e-39  Score=307.33  Aligned_cols=234  Identities=19%  Similarity=0.319  Sum_probs=197.9

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      ....+|++.+.||+|+||.||+|.++  +..||+|++...    ....+.+.+| .++++++||||+++++++.+.+..+
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            34557999999999999999999995  889999999864    2235578889 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          206 LITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +||||+++|+|.+++...  ..+++..++.++.|++.                  ||+++.++.+||+|||+++......
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            999999999999999763  56999999999999986                  9999999999999999998765332


Q ss_pred             ----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccch-hccccccCCCCccCCCCcHHHHHH
Q 039021          266 ----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDF-MHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       266 ----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                          ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||....... ............ +..+|+++.+|
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l  244 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYEL  244 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC-CTTCCHHHHHH
T ss_pred             cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCC-CCCCCHHHHHH
Confidence                22237889999999999999999999999999999999 999998876332 222222223332 36689999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +.+||..||.+|||+.++++.|+.+...
T Consensus       245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          245 MRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999887543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.3e-40  Score=331.10  Aligned_cols=235  Identities=15%  Similarity=0.131  Sum_probs=193.7

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      ....+|++.+.||+|+||+||+|+++  ++.||+|++.+...........+.+| .+++.++||||++++++|.+.+.+|
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            34457999999999999999999985  78999999986322222233447888 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          206 LITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ||||||+||+|.+++.. .+.+++..++.++.||+.                  |||++.++.+||+|||+|+...... 
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence            99999999999999987 578999999999999986                  9999999999999999997664322 


Q ss_pred             ---CCCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc-cCCCCcc--CCCCc
Q 039021          266 ---PNQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV-NFEPKFQ--ISRCP  333 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~-~~~~~~~--~~~~~  333 (464)
                         ...+||+.|+|||++.     ...|+.++|||||||++|||++|+.||.+.+. +....+.. .....++  ...++
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s  310 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS  310 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSC
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCC
Confidence               2356999999999987     56789999999999999999999999988762 22222211 1112222  14589


Q ss_pred             HHHHHHHHHHcccCCCC--CCCHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSK--RPTFAAVIITLEE  363 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~--Rpt~~~i~~~l~~  363 (464)
                      +++.+||++||..+|++  ||++.++++|.+.
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff  342 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKKHPFF  342 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGG
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhCCCcc
Confidence            99999999999988888  9999999999754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.4e-39  Score=309.17  Aligned_cols=231  Identities=20%  Similarity=0.230  Sum_probs=195.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|++.  ++.||+|++.............+.+| +++++++||||+++++++.+.+..++|||
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence            7999999999999999999985  77899999976432222234567888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-CCCCcC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPNQEN  270 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~~~g  270 (464)
                      |+++|+|.+++...+.+++..+..++.|++.                  ||+++.++.+||+|||++...... .....|
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  174 (284)
T 2vgo_A           95 FAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCG  174 (284)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCS
T ss_pred             eCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccC
Confidence            9999999999988889999999999999987                  999999999999999998765532 234459


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      ++.|+|||++.+..++.++||||||+++|+|++|..||..................++ ..+++++.+||.+||+.||.+
T Consensus       175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  253 (284)
T 2vgo_A          175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP-PFLSDGSKDLISKLLRYHPPQ  253 (284)
T ss_dssp             CGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC-TTSCHHHHHHHHHHSCSSGGG
T ss_pred             CCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC-CcCCHHHHHHHHHHhhcCHhh
Confidence            9999999999999999999999999999999999999987763222222222233333 558999999999999999999


Q ss_pred             CCCHHHHHHHHHHH
Q 039021          351 RPTFAAVIITLEEV  364 (464)
Q Consensus       351 Rpt~~~i~~~l~~~  364 (464)
                      |||+.++++|.+..
T Consensus       254 Rps~~~ll~h~~~~  267 (284)
T 2vgo_A          254 RLPLKGVMEHPWVK  267 (284)
T ss_dssp             SCCHHHHHTCHHHH
T ss_pred             CCCHHHHhhCHHHH
Confidence            99999999987654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=310.91  Aligned_cols=230  Identities=17%  Similarity=0.235  Sum_probs=184.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCch-----------------------HHHHHhHHHH-HHHHhc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP-----------------------VKMVLSAKDN-CKLREL  186 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e-~~l~~l  186 (464)
                      +|++.+.||+|+||.||+|++.  ++.||+|++.......                       ....+.+.+| ++|+++
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            7999999999999999999984  8899999998643211                       1123567889 999999


Q ss_pred             CCCceeeeeceeee--CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccC
Q 039021          187 RHPNILQFLGSIVL--GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDE  246 (464)
Q Consensus       187 ~hpnIv~~~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~  246 (464)
                      +||||+++++++.+  .+.+++||||+++|+|.+++. .+.+++.++..++.|+++                  |||++.
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  172 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE  172 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence            99999999999987  567999999999999988764 358999999999999986                  999999


Q ss_pred             CCceeEecchhhhhhcccC---CCCcCCCCcccccccccCC---CCCcccchhHHHHHHHHHhCCCCCCCCccchhcccc
Q 039021          247 GDHLKIGEYWVQMFYEQIH---PNQENSQRNDNSSIASNVL---DDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKS  320 (464)
Q Consensus       247 ~~~~kl~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~  320 (464)
                      ++.+||+|||+++......   ....||+.|+|||++.+..   ++.++|||||||++|+|++|+.||............
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~  252 (298)
T 2zv2_A          173 DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI  252 (298)
T ss_dssp             TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHH
Confidence            9999999999998765332   3446999999999997755   377899999999999999999999877632222222


Q ss_pred             ccCCCCcc-CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          321 VNFEPKFQ-ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       321 ~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ......++ ...+++++.+||.+||+.||++|||+.++++|.+.
T Consensus       253 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~  296 (298)
T 2zv2_A          253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV  296 (298)
T ss_dssp             HHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHH
T ss_pred             hcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccc
Confidence            11122222 25689999999999999999999999999998653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.2e-39  Score=313.65  Aligned_cols=240  Identities=19%  Similarity=0.296  Sum_probs=184.6

Q ss_pred             ccccccccccccccccceeeeeEEeEEe--C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR--G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      +.+...+|++.+.||+|+||.||+|+++  +   ..||+|+++..... ....+.+.+| +++++++||||+++++++..
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-SSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-HHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            3445558999999999999999999974  2   27999999865332 2345678889 99999999999999999987


Q ss_pred             CCce------EEEEEecCCCChHHHHhhcc------CCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          201 GEEM------ILITEYLPKGNLKGILSKKV------RLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       201 ~~~~------~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      ....      ++||||+++|+|.+++....      .+++.++..++.|++.                  |||++.++.+
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCE
Confidence            7654      99999999999999996532      6999999999999987                  9999999999


Q ss_pred             eEecchhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccC
Q 039021          251 KIGEYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~  323 (464)
                      ||+|||+++.......     ...+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.. .+.........
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~  256 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN  256 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence            9999999987653321     2237789999999999999999999999999999999 999998876 33333333333


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .... +..+++++.+|+.+||+.||++|||+.++++.|+.+....
T Consensus       257 ~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          257 RLKQ-PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             CCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             CCCC-CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            3333 3668999999999999999999999999999999886533

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.5e-39  Score=302.03  Aligned_cols=231  Identities=20%  Similarity=0.312  Sum_probs=195.8

Q ss_pred             ccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..+|++.+.||+|+||.||+|.+. ++.||+|++......    .+.+.+| +++++++||||+++++++.+.+..++||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence            347889999999999999999984 778999999865332    2467888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc----C
Q 039021          209 EYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI----H  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~----~  265 (464)
                      ||+++|+|.+++... +.+++..+..++.|++.                  ||+++.++.+||+|||+++.....    .
T Consensus        83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence            999999999999764 57899999999999986                  999999999999999999876422    2


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ....+++.|+|||++.+..++.++||||||+++|+|++ |+.||..... +....+....... .+..+++++.+++.+|
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~~  241 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-KPRLASTHVYQIMNHC  241 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-CCTTSCHHHHHHHHHH
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC-CCccCcHHHHHHHHHH
Confidence            33447889999999998899999999999999999999 8999988763 3333333332222 3356799999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      |+.||++|||+.+++++|+.+.+
T Consensus       242 l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          242 WRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999998854

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.5e-39  Score=308.06  Aligned_cols=232  Identities=17%  Similarity=0.171  Sum_probs=198.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|++.  ++.||+|++...........+.+.+| .++++++||||+++++++.+.+..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            46999999999999999999985  78999999987655555667788889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~  267 (464)
                      ||+++++|.+++...+.+++.++..++.|+++                  |||++.++.+||+|||+++.....   ...
T Consensus        95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  174 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV  174 (294)
T ss_dssp             ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccccc
Confidence            99999999999988889999999999999987                  999999999999999999876422   233


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|+.||...................+ ..+++.+.+++.+||+.|
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~  253 (294)
T 2rku_A          175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP-KHINPVAASLIQKMLQTD  253 (294)
T ss_dssp             CCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC-TTSCHHHHHHHHHHTCSS
T ss_pred             ccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc-cccCHHHHHHHHHHcccC
Confidence            4599999999999998999999999999999999999999988763222222222222332 568899999999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEEV  364 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~~  364 (464)
                      |++|||+.++++|.+..
T Consensus       254 p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          254 PTARPTINELLNDEFFT  270 (294)
T ss_dssp             GGGSCCGGGGGGSHHHH
T ss_pred             hhhCcCHHHHhhChhee
Confidence            99999999999987653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=5.1e-39  Score=315.98  Aligned_cols=234  Identities=15%  Similarity=0.181  Sum_probs=196.4

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+|+++  +..||+|++....  .....+.+.+| .++++++||||+++++++.+++..++|
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence            447999999999999999999995  8899999998652  24456678889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhccc-CCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPN  267 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~  267 (464)
                      |||+++|+|.+++...+.+++..+..++.|++.                   |||++.++.+||+|||+++..... ...
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  189 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  189 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence            999999999999998889999999999999976                   999999999999999999876543 334


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh-------------------------------
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM-------------------------------  316 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~-------------------------------  316 (464)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|+.||........                               
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM  269 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence            5699999999999999999999999999999999999999986552111                               


Q ss_pred             ------------ccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          317 ------------HLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       317 ------------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                                  ........+..+...+++++.+||.+||+.||++|||+.++++|.+.-..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                        01111122233334578999999999999999999999999999776543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.6e-39  Score=314.38  Aligned_cols=238  Identities=20%  Similarity=0.266  Sum_probs=194.4

Q ss_pred             cccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          126 NFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       126 ~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+.....+|++.+.||+|+||.||+|+++ ++.||+|.+....   ....+.+.+| .++++++||||+++++++.+.+.
T Consensus        33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred             HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence            44455568999999999999999999985 8899999987643   2345678889 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          204 MILITEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      .++||||+++|+|.+++...    ..+++..++.++.|+++                  |||++.++.+||+|||+++..
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            99999999999999999654    35899999999999986                  999999999999999999865


Q ss_pred             cccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh----ccc---------cccC
Q 039021          262 EQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM----HLK---------SVNF  323 (464)
Q Consensus       262 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~----~~~---------~~~~  323 (464)
                      ....     ....||+.|+|||++.+..++.++|||||||++|||++|+.||........    .+.         ....
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (321)
T 2qkw_B          190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV  269 (321)
T ss_dssp             SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhc
Confidence            4321     223489999999999999999999999999999999999999976541111    000         0000


Q ss_pred             CCCc---cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          324 EPKF---QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       324 ~~~~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+..   ....+++.+.+++.+||+.||++|||+.+++++|+.+.+
T Consensus       270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            0111   113356789999999999999999999999999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.9e-39  Score=306.01  Aligned_cols=239  Identities=16%  Similarity=0.210  Sum_probs=198.8

Q ss_pred             cccccccccc-ccccceeeeeEEeEE----eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          129 ISELNTLHSS-MVEQGVFGESQTAKW----RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       129 ~~~~~~~~~~-~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ....+|.+.+ .||+|+||.||+|.+    .+..||+|+++...  .....+.+.+| +++++++||||+++++++ ..+
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE   82 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence            3444666666 999999999999986    37789999998642  34556778899 999999999999999999 556


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ..++||||+++|+|.+++.. ...+++..++.++.|++.                  ||+++.++.+||+|||+++....
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            79999999999999999965 457999999999999987                  99999999999999999987643


Q ss_pred             cC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHH
Q 039021          264 IH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       264 ~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ..      ....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.... .+....+..+..+..+ ..+|++
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~  241 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP-PECPPE  241 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC-TTCCHH
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCC-CCcCHH
Confidence            21      22337899999999998899999999999999999998 999998876 3333333333334433 678999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcCC
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRS  371 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~~  371 (464)
                      +.++|.+||+.||++|||+.+++++|+.+.......
T Consensus       242 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  277 (287)
T 1u59_A          242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  277 (287)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999999999997665543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.8e-39  Score=308.90  Aligned_cols=232  Identities=14%  Similarity=0.148  Sum_probs=189.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  ++.||+|++...........+.+.+| .++++++||||+++++++.+++..++|||
T Consensus        35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 2h34_A           35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR  114 (309)
T ss_dssp             CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence            6999999999999999999984  88999999987554445566788899 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~~  267 (464)
                      |+++++|.+++...+.+++.+++.++.|+++                  |||++.++.+||+|||+++......    ..
T Consensus       115 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  194 (309)
T 2h34_A          115 LINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN  194 (309)
T ss_dssp             CCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------------
T ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccc
Confidence            9999999999998889999999999999987                  9999999999999999998765432    23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCC--CCccCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE--PKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|+.||................  +......+|+++.++|.+||+
T Consensus       195 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  274 (309)
T 2h34_A          195 TVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMA  274 (309)
T ss_dssp             --CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTC
T ss_pred             cCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhcc
Confidence            359999999999999999999999999999999999999998876333222221111  112235689999999999999


Q ss_pred             cCCCCCC-CHHHHHHHHHHH
Q 039021          346 KDPSKRP-TFAAVIITLEEV  364 (464)
Q Consensus       346 ~dp~~Rp-t~~~i~~~l~~~  364 (464)
                      .||++|| ++.++++.|+..
T Consensus       275 ~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          275 KNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             SSGGGSCSSHHHHHHHHHHT
T ss_pred             CCHHHHHHhHHHHHHHHHHH
Confidence            9999999 999999998866

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.9e-39  Score=314.55  Aligned_cols=233  Identities=17%  Similarity=0.170  Sum_probs=199.4

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|.+.+.||+|+||.||++++.  ++.||+|++...........+.+.+| .++++++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            346999999999999999999985  78999999987655555667788889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~  266 (464)
                      |||+++++|.+++...+.+++.+++.++.|+++                  |||++.++.+||+|||+++.....   ..
T Consensus       120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  199 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK  199 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCccccc
Confidence            999999999999988889999999999999987                  999999999999999999876522   23


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ...||+.|+|||++.+..++.++||||||+++|+|++|+.||..................++ ..+++++.+||.+||+.
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~  278 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP-KHINPVAASLIQKMLQT  278 (335)
T ss_dssp             CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-TTSCHHHHHHHHHHTCS
T ss_pred             ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC-ccCCHHHHHHHHHHccC
Confidence            34599999999999999999999999999999999999999987763222222212222332 56889999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||++|||+.++++|.+..
T Consensus       279 dp~~Rps~~ell~~~~~~  296 (335)
T 2owb_A          279 DPTARPTINELLNDEFFT  296 (335)
T ss_dssp             SGGGSCCGGGGGGSHHHH
T ss_pred             ChhHCcCHHHHhcCcccc
Confidence            999999999999987643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.3e-39  Score=327.93  Aligned_cols=234  Identities=23%  Similarity=0.345  Sum_probs=192.3

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      ..|++  ...+|++.+.||+|+||.||+|.++ +..||+|+++.....    .+.+.+| ++|++++||||+++++++.+
T Consensus       177 ~~~~i--~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~  250 (452)
T 1fmk_A          177 DAWEI--PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE  250 (452)
T ss_dssp             TCSBC--CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccccc--ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            33444  4457889999999999999999997 567999999865322    3468889 99999999999999999876


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                       +..+|||||+++|+|.++++..  ..+++.+++.++.|++.                  |||++.++.+||+|||+++.
T Consensus       251 -~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          251 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  329 (452)
T ss_dssp             -SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             -CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcccee
Confidence             7789999999999999999753  56999999999999987                  99999999999999999987


Q ss_pred             hcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcH
Q 039021          261 YEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       261 ~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      .....    ....+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.. .+....+..+.+.+.+ ..+|+
T Consensus       330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~-~~~~~  408 (452)
T 1fmk_A          330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP-PECPE  408 (452)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTSCH
T ss_pred             cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCH
Confidence            65322    22337789999999999999999999999999999999 999998876 3333333344444433 56899


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+.+||.+||+.||++|||+.+|++.|+.+
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999998876

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=6.6e-39  Score=304.43  Aligned_cols=232  Identities=16%  Similarity=0.138  Sum_probs=195.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++...... ....+.+.+| .++++++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46999999999999999999985  889999999865433 3345678888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCc---eeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDH---LKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~---~kl~DFG~a~~~~~~~--  265 (464)
                      ||+++|+|.+++..+..+++..+..++.|++.                  ||+++.++.   +||+|||++.......  
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence            99999999999988889999999999999986                  999987655   9999999998765433  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccC-C-CCccCCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNF-E-PKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|..||....... ........ . +......+++++.+|+.+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS  244 (284)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHH
Confidence            23459999999999999999999999999999999999999998876322 22221111 1 111124679999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||+.||++|||+.++++|.+..
T Consensus       245 ~l~~dp~~Rps~~~~l~h~~~~  266 (284)
T 3kk8_A          245 MLTVNPKKRITADQALKVPWIC  266 (284)
T ss_dssp             HSCSSTTTSCCHHHHTTSHHHH
T ss_pred             HcccChhhCCCHHHHhcCcccc
Confidence            9999999999999999997653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.4e-40  Score=325.56  Aligned_cols=233  Identities=15%  Similarity=0.097  Sum_probs=191.6

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||+||+|+++  |+.||+|++++...........+.+| .++..++||||++++++|.+.+.+||
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l  138 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL  138 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            3457999999999999999999984  89999999986432223344567888 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||||++||+|.+++.+. ..+++..++.++.||+.                  |||++.++++||+|||+++......  
T Consensus       139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~  218 (412)
T 2vd5_A          139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV  218 (412)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred             EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc
Confidence            99999999999999875 48999999999999986                  9999999999999999998765322  


Q ss_pred             --CCCcCCCCcccccccc-------cCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccc-cCCCCcc--CCCC
Q 039021          266 --PNQENSQRNDNSSIAS-------NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSV-NFEPKFQ--ISRC  332 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~-~~~~~~~--~~~~  332 (464)
                        ...+||+.|+|||++.       ...|+.++|||||||++|||++|+.||.+.+... ...+.. .....++  ...+
T Consensus       219 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  298 (412)
T 2vd5_A          219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGV  298 (412)
T ss_dssp             ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CC
T ss_pred             ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCC
Confidence              2356999999999987       3578999999999999999999999998876322 222211 1111122  2568


Q ss_pred             cHHHHHHHHHHcccCCCCC---CCHHHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKR---PTFAAVIITLEE  363 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~R---pt~~~i~~~l~~  363 (464)
                      |+++.+||++||. +|.+|   |++.++++|.+.
T Consensus       299 s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff  331 (412)
T 2vd5_A          299 PEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF  331 (412)
T ss_dssp             CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred             CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence            9999999999999 99998   599999998653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=5.3e-39  Score=306.38  Aligned_cols=238  Identities=16%  Similarity=0.201  Sum_probs=195.8

Q ss_pred             cccccccccccc-ccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          127 FDISELNTLHSS-MVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       127 i~~~~~~~~~~~-~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      +.....+|.+.+ .||+|+||.||+|.+.    ++.||+|+++.... .....+.+.+| +++++++||||+++++++ .
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            344455788888 9999999999999763    67899999986432 23345678889 999999999999999998 6


Q ss_pred             CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          201 GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      .+..++||||+++|+|.+++...+.+++..++.++.|++.                  |||++.++.+||+|||+++...
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            6778999999999999999998888999999999999987                  9999999999999999998765


Q ss_pred             ccC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcH
Q 039021          263 QIH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       263 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ...      ....+++.|+|||++.+..++.++||||||+++|+|++ |+.||..... +..........+..+ ..+|+
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~  247 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP-AGCPR  247 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCH
T ss_pred             cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCH
Confidence            322      12236789999999998889999999999999999999 9999988763 333333333333333 56899


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      ++.++|.+||+.||++|||+.++++.|+.+...
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999888543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=6.7e-39  Score=310.06  Aligned_cols=235  Identities=19%  Similarity=0.284  Sum_probs=196.3

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeecee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSI  198 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~  198 (464)
                      +.....+|++.+.||+|+||.||+|.++       ++.||+|++....  .......+.+| .++++++||||+++++++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            3444568999999999999999999874       5789999998642  23445678889 999999999999999999


Q ss_pred             eeCCceEEEEEecCCCChHHHHhhc----------cCCCHHHHHHHHHHHHh------------------hhcccCCCce
Q 039021          199 VLGEEMILITEYLPKGNLKGILSKK----------VRLDLPTALRYALDIAR------------------NLLQDEGDHL  250 (464)
Q Consensus       199 ~~~~~~~lv~E~~~~g~L~~~l~~~----------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~  250 (464)
                      .+.+..++||||+++|+|.+++...          ..+++..++.++.|++.                  |||++.++.+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence            9999999999999999999999753          35799999999999986                  9999999999


Q ss_pred             eEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccC
Q 039021          251 KIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNF  323 (464)
Q Consensus       251 kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~  323 (464)
                      ||+|||+++......     ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||..... +.........
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  257 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG  257 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC
Confidence            999999998765332     22337889999999999999999999999999999999 8999988763 3333332222


Q ss_pred             CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       324 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+.. +..+++.+.+||.+||+.||++|||+.+++++|+..
T Consensus       258 ~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          258 LLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             CCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             cCCC-CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            2222 366899999999999999999999999999999765

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=306.28  Aligned_cols=229  Identities=19%  Similarity=0.233  Sum_probs=171.1

Q ss_pred             ccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++  .++.||+|++...........+.+.+| .++++++||||+++++++.+.+..++|||
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE   91 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence            689999999999999999998  488999999986422222234678888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~  267 (464)
                      |+++++|.+++... ..+++..++.++.|+++                  ||+++.++.+||+|||++......   ...
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  171 (278)
T 3cok_A           92 MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT  171 (278)
T ss_dssp             CCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--------
T ss_pred             cCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCccee
Confidence            99999999999865 67999999999999987                  999999999999999999876522   223


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|+.||................... +..+++++.+||.+||+.|
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~d  250 (278)
T 3cok_A          172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM-PSFLSIEAKDLIHQLLRRN  250 (278)
T ss_dssp             --------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCC-CTTSCHHHHHHHHHHSCSS
T ss_pred             ccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCC-ccccCHHHHHHHHHHcccC
Confidence            459999999999999999999999999999999999999998765222111111112222 2457899999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLE  362 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~  362 (464)
                      |++|||+.++++|.+
T Consensus       251 p~~Rps~~~~l~h~~  265 (278)
T 3cok_A          251 PADRLSLSSVLDHPF  265 (278)
T ss_dssp             GGGSCCHHHHTTSTT
T ss_pred             HhhCCCHHHHhcCcc
Confidence            999999999998754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.1e-38  Score=305.20  Aligned_cols=244  Identities=16%  Similarity=0.281  Sum_probs=198.4

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeec
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLG  196 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~  196 (464)
                      ..+.+.....+|++.+.||+|+||.||+|.+.     ...||+|.+...  ......+.+.+| .++++++||||+++++
T Consensus        16 ~~~~i~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   93 (298)
T 3f66_A           16 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLG   93 (298)
T ss_dssp             GGGBCCGGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             hheecCccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeee
Confidence            34556677778999999999999999999973     235899998763  334556778889 9999999999999999


Q ss_pred             eee-eCCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecch
Q 039021          197 SIV-LGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       197 ~~~-~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG  256 (464)
                      ++. .++..++||||+++|+|.++++. ...+++..++.++.|++.                  |||++.++.+||+|||
T Consensus        94 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  173 (298)
T 3f66_A           94 ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG  173 (298)
T ss_dssp             EECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred             EEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccc
Confidence            865 45678999999999999999975 456899999999999986                  9999999999999999


Q ss_pred             hhhhhcccC-------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCc
Q 039021          257 VQMFYEQIH-------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKF  327 (464)
Q Consensus       257 ~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~  327 (464)
                      +++......       ....||+.|+|||++.+..++.++||||||+++|+|++ |..||.... .+........ ....
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~  252 (298)
T 3f66_A          174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLL  252 (298)
T ss_dssp             GGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-CCCC
T ss_pred             ccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-CCCC
Confidence            998664321       22337889999999999999999999999999999999 666777665 2333222222 2233


Q ss_pred             cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       328 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      .+..+|+++.+++.+||+.||++|||+.++++.|+.+...+.
T Consensus       253 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          253 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            346689999999999999999999999999999999866443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=9.2e-39  Score=303.08  Aligned_cols=236  Identities=21%  Similarity=0.329  Sum_probs=193.4

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      +.+...+|.+.+.||+|+||.||+|.+.     +..||+|++....  .....+.+.+| .++++++||||+++++++.+
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   84 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE   84 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence            3445568999999999999999999974     2359999998652  24456778889 99999999999999998865


Q ss_pred             CCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                       +..++||||+++|+|.+++... ..+++..+..++.|+++                  |||++.++.+||+|||+++..
T Consensus        85 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           85 -EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             -CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence             4578999999999999999764 56999999999999987                  999999999999999999876


Q ss_pred             cccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHH
Q 039021          262 EQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       262 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ....    ....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.... ............... +..+++.
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  242 (281)
T 3cc6_A          164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPV  242 (281)
T ss_dssp             ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCC-CTTCCHH
T ss_pred             ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCC-CCCCCHH
Confidence            5432    23347889999999998999999999999999999998 999998665 232222222223332 3568999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      +.+++.+||+.||++|||+.+++++|+.+..
T Consensus       243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999988754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-39  Score=320.81  Aligned_cols=228  Identities=16%  Similarity=0.181  Sum_probs=190.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++....   ......+.+| .+|++++||||+++++++.+.+.+++||
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence            36999999999999999999984  8899999998642   3334578889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccC--CCceeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDE--GDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~--~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||+++|+|.+++... ..+++.++..++.||+.                  |||++.  .+.+||+|||+++......  
T Consensus       128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence            999999999999764 47999999999999987                  999974  4679999999998765432  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-C-CCccCCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-E-PKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+... +....+.... . +......+++++.+||.+
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  287 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN  287 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHT
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHH
Confidence            233599999999999999999999999999999999999999988762 2222221111 1 111124689999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ||+.||++|||+.++++|.+
T Consensus       288 ~L~~dP~~Rpt~~ell~hp~  307 (387)
T 1kob_A          288 LLQKEPRKRLTVHDALEHPW  307 (387)
T ss_dssp             TSCSSGGGSCCHHHHHTSTT
T ss_pred             HcCCChhHCcCHHHHhhCcc
Confidence            99999999999999998854

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.6e-39  Score=315.03  Aligned_cols=233  Identities=18%  Similarity=0.286  Sum_probs=189.9

Q ss_pred             cccccccccccccceeeeeEEeEEe--Cce----EEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTW----VVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~----vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ...+|++.+.||+|+||.||+|++.  ++.    ||+|.+.....  ......+.+| .++++++||||+++++++. ++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~   87 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS   87 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence            3447999999999999999999984  444    77777754321  2223456778 9999999999999999886 56


Q ss_pred             ceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ..++||||+++|+|.+++... +.+++..++.++.|++.                  |||++.++.+||+|||+++....
T Consensus        88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  167 (325)
T 3kex_A           88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP  167 (325)
T ss_dssp             SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred             ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence            689999999999999999764 68999999999999987                  99999999999999999998754


Q ss_pred             cC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccc-hhccccccCCCCccCCCCcHHH
Q 039021          264 IH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       264 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ..     ....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.... ............. +..+++++
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  246 (325)
T 3kex_A          168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ-PQICTIDV  246 (325)
T ss_dssp             CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC-CTTBCTTT
T ss_pred             ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC-CCcCcHHH
Confidence            32     22337889999999999999999999999999999999 99999887633 3233333223332 35578899


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .++|.+||+.||.+|||+.+++++|+.+..
T Consensus       247 ~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          247 YMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             THHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999988753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=5.7e-39  Score=310.59  Aligned_cols=232  Identities=18%  Similarity=0.158  Sum_probs=194.7

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      ...+|++.+.||+|+||.||+|++.  |+.||+|++........   ...+.+.+| .++++++||||+++++++.+.+.
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            3446999999999999999999984  88999999986543221   124568889 99999999999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC----ceeEecchhhhhh
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD----HLKIGEYWVQMFY  261 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~----~~kl~DFG~a~~~  261 (464)
                      .++||||+++|+|.+++...+.+++..+..++.|++.                  |||++.++    .+||+|||+++..
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~  169 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI  169 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence            9999999999999999998888999999999999987                  99999887    7999999999876


Q ss_pred             cccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCcc---CCCCcHH
Q 039021          262 EQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQ---ISRCPNR  335 (464)
Q Consensus       262 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~  335 (464)
                      ....  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+... +....... ....++   ...+++.
T Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~  248 (321)
T 2a2a_A          170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS-VSYDFDEEFFSHTSEL  248 (321)
T ss_dssp             CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT-TCCCCCHHHHTTCCHH
T ss_pred             CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh-cccccChhhhcccCHH
Confidence            5432  334599999999999999999999999999999999999999988762 22222211 111111   1568899


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +.+||.+||+.||++|||+.++++|.+
T Consensus       249 ~~~li~~~l~~dp~~Rps~~e~l~hp~  275 (321)
T 2a2a_A          249 AKDFIRKLLVKETRKRLTIQEALRHPW  275 (321)
T ss_dssp             HHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            999999999999999999999998754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=6e-39  Score=303.65  Aligned_cols=229  Identities=17%  Similarity=0.140  Sum_probs=191.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  +..||+|.+......   ..+.+.+| +++++++||||+++++++.+.+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            46999999999999999999985  678999999864322   24568889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||+++++|.+++...+.+++..+..++.|++.                  |||+   +.++.+||+|||++.......  
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence            99999999999988889999999999999987                  9999   778899999999998765332  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccC---CCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI---SRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+. ++.++||||||+++|+|++|+.||..................++.   ..+++++.+||.+
T Consensus       166 ~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRR  244 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHH
Confidence            344599999999988654 899999999999999999999999887632222222111222221   3689999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||+.||++|||+.++++|.+.-
T Consensus       245 ~l~~dp~~R~s~~~~l~h~~~~  266 (277)
T 3f3z_A          245 LLTKSPKQRITSLQALEHEWFE  266 (277)
T ss_dssp             HTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HccCChhhCcCHHHHhcCHHHh
Confidence            9999999999999999987643

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=7.3e-39  Score=304.65  Aligned_cols=230  Identities=21%  Similarity=0.304  Sum_probs=188.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHH----HHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKM----VLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~----~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      ..+|++.+.||+|+||.||+|++.  ++.||+|++..........    .+.+.+| .++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            347899999999999999999984  8899999997543322221    1578889 9999999999999999987654 


Q ss_pred             eEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh--------------------hhcccCCCc-----eeEecchh
Q 039021          204 MILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR--------------------NLLQDEGDH-----LKIGEYWV  257 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~--------------------Nill~~~~~-----~kl~DFG~  257 (464)
                       ++||||+++|+|.+++.. ...+++..++.++.|++.                    |||++.++.     +||+|||+
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~  175 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL  175 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred             -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence             799999999999988865 457999999999999976                    999987776     99999999


Q ss_pred             hhhhcccCCCCcCCCCccccccc--ccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch---hcccc-ccCCCCccCCC
Q 039021          258 QMFYEQIHPNQENSQRNDNSSIA--SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF---MHLKS-VNFEPKFQISR  331 (464)
Q Consensus       258 a~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~---~~~~~-~~~~~~~~~~~  331 (464)
                      ++..........||+.|+|||++  ....++.++|||||||++|+|++|+.||.......   ..... ....+.. +..
T Consensus       176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~  254 (287)
T 4f0f_A          176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI-PED  254 (287)
T ss_dssp             CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCC-CTT
T ss_pred             cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCC-Ccc
Confidence            98766555556799999999998  44667899999999999999999999998765222   11111 2223333 366


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +|+++.+||.+||+.||++|||+.++++.|+.
T Consensus       255 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          255 CPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            89999999999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=4.8e-39  Score=304.09  Aligned_cols=231  Identities=19%  Similarity=0.231  Sum_probs=187.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|++.  |+.||+|++.............+.+| .+++.++||||+++++++.+.+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            37999999999999999999985  88999999986432222334567888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PNQ  268 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~~  268 (464)
                      ||+++++|.+++...+.+++..+..++.|++.                  ||+++.++.+||+|||++.......  ...
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  170 (276)
T 2h6d_A           91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS  170 (276)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------
T ss_pred             eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecc
Confidence            99999999999988889999999999999986                  9999999999999999998765432  234


Q ss_pred             cCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          269 ENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      .||+.|+|||++.+..+ +.++||||||+++|+|++|..||...................+ ..+++++.++|.+||+.|
T Consensus       171 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~  249 (276)
T 2h6d_A          171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP-EYLNRSVATLLMHMLQVD  249 (276)
T ss_dssp             ------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSS
T ss_pred             cCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc-hhcCHHHHHHHHHHccCC
Confidence            58999999999988765 5899999999999999999999987763322222222222222 557899999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039021          348 PSKRPTFAAVIITLEE  363 (464)
Q Consensus       348 p~~Rpt~~~i~~~l~~  363 (464)
                      |++|||+.++++|.+.
T Consensus       250 p~~Rps~~~~l~h~~~  265 (276)
T 2h6d_A          250 PLKRATIKDIREHEWF  265 (276)
T ss_dssp             GGGSCCHHHHHHSHHH
T ss_pred             hhhCCCHHHHHhChhh
Confidence            9999999999998664

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=6.6e-39  Score=309.13  Aligned_cols=237  Identities=18%  Similarity=0.247  Sum_probs=195.4

Q ss_pred             cccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeecee
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSI  198 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~  198 (464)
                      .....+|++.+.||+|+||.||+|++.       ++.||+|++....  .....+.+.+| .+++++ +||||+++++++
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            344557999999999999999999863       5789999998653  23445678888 999999 799999999998


Q ss_pred             eeCC-ceEEEEEecCCCChHHHHhhccC----------------CCHHHHHHHHHHHHh------------------hhc
Q 039021          199 VLGE-EMILITEYLPKGNLKGILSKKVR----------------LDLPTALRYALDIAR------------------NLL  243 (464)
Q Consensus       199 ~~~~-~~~lv~E~~~~g~L~~~l~~~~~----------------l~~~~~~~~~~qi~~------------------Nil  243 (464)
                      ...+ .+++||||+++|+|.+++.....                +++..++.++.|++.                  |||
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            8754 58999999999999999976543                899999999999987                  999


Q ss_pred             ccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-c-h
Q 039021          244 QDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-D-F  315 (464)
Q Consensus       244 l~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~-~  315 (464)
                      ++.++.+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|+|++ |..||..... . .
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  260 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  260 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence            9999999999999998765322     12337889999999999999999999999999999998 9999987652 2 2


Q ss_pred             hccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          316 MHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      ............ +..+++++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus       261 ~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          261 CRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHHHTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhccCccCCC-CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            222222222332 255899999999999999999999999999999988654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-38  Score=302.01  Aligned_cols=248  Identities=20%  Similarity=0.325  Sum_probs=201.7

Q ss_pred             CCCCccccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeee
Q 039021          121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQF  194 (464)
Q Consensus       121 ~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~  194 (464)
                      ..+++.+......|.+.+.||+|+||.||+|.+.     +..||+|++...  ......+.+.+| .++++++||||+++
T Consensus        10 ~~~~~~i~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~   87 (298)
T 3pls_A           10 EVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLAL   87 (298)
T ss_dssp             HTGGGBCCGGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             hhhheEccccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            3455667777778889999999999999999973     237999998753  334556778889 99999999999999


Q ss_pred             eceeeeCCce-EEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEec
Q 039021          195 LGSIVLGEEM-ILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGE  254 (464)
Q Consensus       195 ~~~~~~~~~~-~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~D  254 (464)
                      ++++.+.+.. ++||||+.+|+|.+++.. ...+++..++.++.|++.                  |||++.++.+||+|
T Consensus        88 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~D  167 (298)
T 3pls_A           88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVAD  167 (298)
T ss_dssp             CEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCc
Confidence            9999876655 999999999999999976 467899999999999987                  99999999999999


Q ss_pred             chhhhhhccc-------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCC-CCCCCCc-cchhccccccCCC
Q 039021          255 YWVQMFYEQI-------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK-HLQTNNS-FDFMHLKSVNFEP  325 (464)
Q Consensus       255 FG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~-~p~~~~~-~~~~~~~~~~~~~  325 (464)
                      ||+++.....       .....+|+.|+|||++.+..++.++||||||+++|+|++|. +||.... .............
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T 3pls_A          168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL  247 (298)
T ss_dssp             TTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCC
T ss_pred             CCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCC
Confidence            9999865432       12334889999999999999999999999999999999955 4555544 3333333333233


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcCC
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRS  371 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~~  371 (464)
                      . .+..+++++.+++.+||+.||.+|||+.++++.|+.+...+...
T Consensus       248 ~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~  292 (298)
T 3pls_A          248 P-QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD  292 (298)
T ss_dssp             C-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred             C-CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence            3 23568999999999999999999999999999999997766543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2e-38  Score=302.12  Aligned_cols=234  Identities=15%  Similarity=0.161  Sum_probs=191.8

Q ss_pred             ccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee---
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL---  200 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~---  200 (464)
                      +......|.+.+.||+|+||.||+|.+.  +..||+|++...... ....+.+.+| .++++++||||+++++++..   
T Consensus        21 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   99 (290)
T 1t4h_A           21 MSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             ECTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred             cccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC
Confidence            3334445888899999999999999984  778999999865443 3446778889 99999999999999999875   


Q ss_pred             -CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------hhccc-CCCceeEecchhh
Q 039021          201 -GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------NLLQD-EGDHLKIGEYWVQ  258 (464)
Q Consensus       201 -~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------Nill~-~~~~~kl~DFG~a  258 (464)
                       ...+++||||+++|+|.+++...+.+++..+..++.|++.                    |||++ .++.+||+|||++
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          100 GKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             CCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence             3568999999999999999998889999999999999986                    99997 7889999999999


Q ss_pred             hhhcccC-CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcHH
Q 039021          259 MFYEQIH-PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       259 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ....... ....||+.|+|||++. ..++.++|||||||++|+|++|+.||....  ............+.......+++
T Consensus       180 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (290)
T 1t4h_A          180 TLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  258 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             ccccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHH
Confidence            7655432 2345999999999886 458999999999999999999999998754  22222222222232223557899


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +.+||.+||+.||++|||+.++++|.+
T Consensus       259 l~~li~~~l~~dp~~Rps~~ell~h~~  285 (290)
T 1t4h_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHccCChhhCCCHHHHhhCcc
Confidence            999999999999999999999998754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=6.3e-39  Score=316.44  Aligned_cols=228  Identities=16%  Similarity=0.203  Sum_probs=184.4

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +...+.||+|+||.||+|.+.  |+.||+|+++...   ....+.+.+| ++|++++||||+++++++.+.+.++|||||
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  167 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY  167 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            334678999999999999984  8899999998642   3445678899 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcc--cCCCceeEecchhhhhhcccC--CC
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQ--DEGDHLKIGEYWVQMFYEQIH--PN  267 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill--~~~~~~kl~DFG~a~~~~~~~--~~  267 (464)
                      +++|+|.+++.. ...+++..++.++.||++                  |||+  +.++.+||+|||+++......  ..
T Consensus       168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~  247 (373)
T 2x4f_A          168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV  247 (373)
T ss_dssp             CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence            999999998865 357999999999999987                  9999  567789999999998765432  33


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-C-CCccCCCCcHHHHHHHHHHc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-E-PKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~cl  344 (464)
                      ..||+.|+|||++.+..++.++|||||||++|||++|..||.+... +....+.... . +......+++++.+||.+||
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  327 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLL  327 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTS
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHc
Confidence            4599999999999999999999999999999999999999988762 2222222111 1 11112468999999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.||.+|||+.++++|.+..
T Consensus       328 ~~dp~~Rps~~e~l~hp~~~  347 (373)
T 2x4f_A          328 IKEKSWRISASEALKHPWLS  347 (373)
T ss_dssp             CSSGGGSCCHHHHHHSHHHH
T ss_pred             CCChhhCCCHHHHhcCcCcC
Confidence            99999999999999987643

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.3e-38  Score=309.52  Aligned_cols=238  Identities=20%  Similarity=0.292  Sum_probs=196.5

Q ss_pred             ccccccccccccccccceeeeeEEeEEe--C-----ceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeece
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR--G-----TWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGS  197 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~-----~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~  197 (464)
                      +.....+|.+.+.||+|+||.||+|.+.  +     ..||+|++....  .....+.+.+| .+++++ +||||++++++
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            3444557999999999999999999984  2     479999998643  23455678889 999999 89999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhc--------------cCCCHHHHHHHHHHHHh------------------hhccc
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKK--------------VRLDLPTALRYALDIAR------------------NLLQD  245 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~--------------~~l~~~~~~~~~~qi~~------------------Nill~  245 (464)
                      +.+.+..++||||+++|+|.+++...              ..+++..++.++.|++.                  |||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            99999999999999999999999753              35799999999999987                  99999


Q ss_pred             CCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhcc
Q 039021          246 EGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHL  318 (464)
Q Consensus       246 ~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~  318 (464)
                      .++.+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+... .....
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  278 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK  278 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence            99999999999998765332     22337889999999999999999999999999999998 9999987652 22222


Q ss_pred             -ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          319 -KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       319 -~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                       ........ .+..+|+.+.+||.+||+.||.+|||+.+++++|+.+...
T Consensus       279 ~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          279 LVKDGYQMA-QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence             22222222 2355799999999999999999999999999999887654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.1e-38  Score=305.42  Aligned_cols=241  Identities=17%  Similarity=0.263  Sum_probs=190.1

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      +.....+|.+.+.||+|+||.||+|.+.     +..||+|++...... ....+.+.+| .++++++||||+++++++.+
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            4445568999999999999999999874     348999999865433 3445678889 99999999999999999987


Q ss_pred             CC-----ceEEEEEecCCCChHHHHh------hccCCCHHHHHHHHHHHHh------------------hhcccCCCcee
Q 039021          201 GE-----EMILITEYLPKGNLKGILS------KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLK  251 (464)
Q Consensus       201 ~~-----~~~lv~E~~~~g~L~~~l~------~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~k  251 (464)
                      .+     ..++||||+++|+|.+++.      ....+++..++.++.|+++                  |||++.++.+|
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~k  187 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVC  187 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEE
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEE
Confidence            54     3599999999999999994      2357999999999999987                  99999999999


Q ss_pred             EecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCC
Q 039021          252 IGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFE  324 (464)
Q Consensus       252 l~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~  324 (464)
                      |+|||+++......     ....+++.|+|||++.+..++.++||||||+++|+|++ |..||..... ...........
T Consensus       188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~  267 (313)
T 3brb_A          188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR  267 (313)
T ss_dssp             ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred             EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC
Confidence            99999998765322     22337889999999999999999999999999999999 8999988763 33333333333


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      +..+ ..+++++.++|.+||..||++|||+.+++++|+.+...++
T Consensus       268 ~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          268 LKQP-EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             CCCB-TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             CCCC-ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            3333 6689999999999999999999999999999999876554

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2e-39  Score=333.40  Aligned_cols=233  Identities=15%  Similarity=0.180  Sum_probs=195.8

Q ss_pred             ccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      ....+|++.+.||+|+||.||+|+++  |+.||+|++.............+.+| ++|++++|||||++++++.+.+.+|
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            34457999999999999999999984  89999999986433223334567788 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          206 LITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +||||++||+|.+++...+  .+++..++.++.||+.                  |||++.++.+||+|||+++......
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence            9999999999999997653  4999999999999986                  9999999999999999998765432


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhccccccCCCCccCCCCcHHHHHH
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                        ....||+.|+|||++.+..|+.++|||||||++|||++|..||.....    ..+.......+..++ ..+++++.+|
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p-~~~s~~~~dL  419 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS-ERFSPQARSL  419 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC-TTSCHHHHHH
T ss_pred             cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC-ccCCHHHHHH
Confidence              345699999999999999999999999999999999999999987641    122222222333443 5689999999


Q ss_pred             HHHHcccCCCCCC-----CHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRP-----TFAAVIITLE  362 (464)
Q Consensus       340 i~~cl~~dp~~Rp-----t~~~i~~~l~  362 (464)
                      |.+||+.||.+||     ++.+|++|.+
T Consensus       420 I~~lL~~dP~~R~g~~~~sa~eil~Hpf  447 (576)
T 2acx_A          420 CSQLLCKDPAERLGCRGGSAREVKEHPL  447 (576)
T ss_dssp             HHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred             HHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence            9999999999999     7899999854

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.2e-38  Score=316.59  Aligned_cols=235  Identities=13%  Similarity=0.175  Sum_probs=191.4

Q ss_pred             ccccccccccccccccc--eeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          127 FDISELNTLHSSMVEQG--VFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G--~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      +.....+|++.+.||+|  +||.||+|+++  ++.||+|++...... ....+.+.+| .++++++|||||++++++.++
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   98 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIAD   98 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC
Confidence            33444579999999999  99999999995  899999999875433 3456778889 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      +.+++|||||++|+|.+++...  ..+++..+..++.||+.                  |||++.++.+||+|||.+...
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999999999999765  67999999999999987                  999999999999999998654


Q ss_pred             ccc----------CCCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCC---
Q 039021          262 EQI----------HPNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEP---  325 (464)
Q Consensus       262 ~~~----------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~---  325 (464)
                      ...          .....||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.. .+..........+   
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence            321          122358999999999987  679999999999999999999999998765 2211111110000   


Q ss_pred             -----------------------------------------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          326 -----------------------------------------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       326 -----------------------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                                               ......+++++.+||.+||+.||++|||+.++++|.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~  336 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF  336 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence                                                     0011447889999999999999999999999998854

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.3e-39  Score=329.93  Aligned_cols=233  Identities=18%  Similarity=0.181  Sum_probs=196.2

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|++.+.||+|+||.||+|+++  ++.||+|++.............+.+| .+|++++||||+++++++.+.+.+++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            347999999999999999999984  88999999986544434445678889 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcccCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      |||+.+|+|.+++..++.+++..+..++.||+.                  |||+   +.++.+||+|||+++.......
T Consensus       105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  184 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK  184 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence            999999999999988889999999999999987                  9999   4678899999999987754332


Q ss_pred             --CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccC-CCCcc-CCCCcHHHHHHHH
Q 039021          267 --NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNF-EPKFQ-ISRCPNRLKQLIA  341 (464)
Q Consensus       267 --~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~-~~~~~-~~~~~~~~~~li~  341 (464)
                        ...||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.. .+....+..+. ....+ ...+|+++.+||.
T Consensus       185 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  263 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR  263 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHH
T ss_pred             cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHH
Confidence              2349999999999876 69999999999999999999999998877 33332222221 11111 1458999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||+.||.+|||+.++++|.|..
T Consensus       264 ~~L~~dp~~R~s~~e~l~h~~~~  286 (484)
T 3nyv_A          264 KMLTYVPSMRISARDALDHEWIQ  286 (484)
T ss_dssp             HHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             HHCCCChhHCcCHHHHhhChhhc
Confidence            99999999999999999997754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.9e-38  Score=332.14  Aligned_cols=234  Identities=17%  Similarity=0.213  Sum_probs=192.5

Q ss_pred             cccccc-ccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSS-MVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~-~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ++.+.+ .||+|+||.||+|.++    +..||||+++....  ....+.+.+| ++|++++|||||++++++.. +.++|
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l  412 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML  412 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS--STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence            444445 7999999999999874    56799999986422  2345678889 99999999999999999976 56999


Q ss_pred             EEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC-
Q 039021          207 ITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP-  266 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~-  266 (464)
                      |||||++|+|.+++.. ...+++..++.++.||++                  |||++.++.+||+|||+++....... 
T Consensus       413 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~  492 (613)
T 2ozo_A          413 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY  492 (613)
T ss_dssp             EEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred             EEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence            9999999999999975 456999999999999987                  99999999999999999987653221 


Q ss_pred             -----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHH
Q 039021          267 -----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       267 -----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                           ...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.. .+....+..+.++..+ ..+|+++.+|
T Consensus       493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~l  571 (613)
T 2ozo_A          493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP-PECPPELYAL  571 (613)
T ss_dssp             ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCC-TTCCHHHHHH
T ss_pred             eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC-CcCCHHHHHH
Confidence                 1226689999999999999999999999999999998 999999876 3444444444444443 6689999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      |.+||+.||++|||+.+|++.|+.+......
T Consensus       572 i~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          572 MSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             HHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999988665543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=8e-39  Score=308.19  Aligned_cols=229  Identities=21%  Similarity=0.214  Sum_probs=183.9

Q ss_pred             cccccccccccceeeeeEEeEE-eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+|++.+.||+|+||+||+|++ +++.||+|++..... .......+.+| +++++++||||+++++++.+++.+++|||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            4799999999999999999998 488999999975432 23344667788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~  267 (464)
                      |+++ +|.+++... ..+++..+..++.|+++                  |||++.++.+||+|||+++.....   ...
T Consensus       100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~  178 (311)
T 3niz_A          100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH  178 (311)
T ss_dssp             CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred             CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence            9985 888888654 56999999999999987                  999999999999999999876532   233


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---cc-CCCC---------------
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---VN-FEPK---------------  326 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---~~-~~~~---------------  326 (464)
                      ..||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+... +....+.   .. .+..               
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (311)
T 3niz_A          179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF  258 (311)
T ss_dssp             CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred             CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence            458999999999876 6689999999999999999999999987551 1111110   00 0000               


Q ss_pred             ---------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          327 ---------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       327 ---------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                               ...+.+++++.+||.+||+.||++|||+.|+++|.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  303 (311)
T 3niz_A          259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY  303 (311)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence                     001346789999999999999999999999998854

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.1e-38  Score=327.42  Aligned_cols=232  Identities=19%  Similarity=0.202  Sum_probs=190.8

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH----------HHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV----------KMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~----------~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      ..+|.+++.||+|+||+||+|+++  ++.||+|++........          ...+.+.+| .+|++++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            346999999999999999999985  78999999986532211          234567889 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC---ceeEecch
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD---HLKIGEYW  256 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~---~~kl~DFG  256 (464)
                      +.+.+.++||||||++|+|.+++...+.+++..+..++.||+.                  |||++.++   .+||+|||
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  194 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG  194 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence            9999999999999999999999988889999999999999987                  99998876   69999999


Q ss_pred             hhhhhccc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCcc---CC
Q 039021          257 VQMFYEQI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQ---IS  330 (464)
Q Consensus       257 ~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~---~~  330 (464)
                      +++.....  .....||+.|+|||++. ..++.++|||||||++|+|++|..||.+.... ....+..+ ...++   ..
T Consensus       195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~  272 (504)
T 3q5i_A          195 LSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG-KYYFDFNDWK  272 (504)
T ss_dssp             TCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCHHHHT
T ss_pred             CCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCccccC
Confidence            99876543  23445999999999987 46899999999999999999999999987733 32222221 22111   15


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+|+++.+||.+||+.||.+|||+.++++|.|..
T Consensus       273 ~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  306 (504)
T 3q5i_A          273 NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK  306 (504)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhh
Confidence            6899999999999999999999999999997753

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.5e-39  Score=308.76  Aligned_cols=232  Identities=16%  Similarity=0.166  Sum_probs=187.0

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC--ceE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE--EMI  205 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~--~~~  205 (464)
                      ..+|.+.+.||+|+||.||+|++.  ++.||+|++.....  ....+.+.+| +++++++||||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            457999999999999999999995  88999999986432  2224566788 9999999999999999998765  789


Q ss_pred             EEEEecCCCChHHHHhhcc---CCCHHHHHHHHHHHHh------------------hhcc----cCCCceeEecchhhhh
Q 039021          206 LITEYLPKGNLKGILSKKV---RLDLPTALRYALDIAR------------------NLLQ----DEGDHLKIGEYWVQMF  260 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~------------------Nill----~~~~~~kl~DFG~a~~  260 (464)
                      +||||+++|+|.+++....   .+++.+++.++.|++.                  |||+    +.++.+||+|||+++.
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            9999999999999997643   3999999999999987                  9998    7778899999999987


Q ss_pred             hcccC--CCCcCCCCcccccccc--------cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-----cchhccccccCCC
Q 039021          261 YEQIH--PNQENSQRNDNSSIAS--------NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-----FDFMHLKSVNFEP  325 (464)
Q Consensus       261 ~~~~~--~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-----~~~~~~~~~~~~~  325 (464)
                      .....  ....||+.|+|||++.        +..++.++|||||||++|||++|+.||....     .+.+.......+.
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~  245 (319)
T 4euu_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (319)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred             cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence            65433  3445999999999986        5788999999999999999999999997433     1111111111110


Q ss_pred             ------------------Ccc-----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          326 ------------------KFQ-----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       326 ------------------~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                                        .++     ...+++.+.+||.+||+.||++|||++|+++|....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence                              001     123467899999999999999999999999998765

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.1e-38  Score=302.13  Aligned_cols=234  Identities=20%  Similarity=0.292  Sum_probs=195.0

Q ss_pred             ccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +...+|++.+.||+|+||.||+|.++ +..||+|++......    .+.+.+| +++++++||||+++++++. .+..++
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   84 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence            33457999999999999999999986 568999999864322    3467889 9999999999999999886 456899


Q ss_pred             EEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          207 ITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ||||+++|+|.+++...  ..+++.+++.++.|++.                  |||+++++.+||+|||+++...... 
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence            99999999999999764  37999999999999987                  9999999999999999998765322 


Q ss_pred             ---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHH
Q 039021          266 ---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                         ....+++.|+|||++.+..++.++||||||+++|+|++ |+.||.+.. .+............. +..+++++.+++
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li  243 (279)
T 1qpc_A          165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLM  243 (279)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHH
T ss_pred             ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCC-cccccHHHHHHH
Confidence               23347889999999998889999999999999999999 999998876 333333333323332 356899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          341 AQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .+||+.||++|||+.++++.|+.+....
T Consensus       244 ~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          244 RLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            9999999999999999999999886543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.3e-38  Score=305.55  Aligned_cols=229  Identities=16%  Similarity=0.137  Sum_probs=190.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|++.  |+.||+|++....   ......+.+| .++++++||||+++++++.+.+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            46899999999999999999984  8899999998642   2233567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcccC-C
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQIH-P  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~~~-~  266 (464)
                      ||+++|+|.+++...+.+++..+..++.|++.                  |||+   +.++.+||+|||+++...... .
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred             EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence            99999999999988889999999999999986                  9999   778899999999997654322 1


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCC--CCccCCCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFE--PKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~li~~c  343 (464)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||...... ....+..+..  +......+++++.+||.+|
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  245 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL  245 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHH
Confidence            234999999999999999999999999999999999999999876622 2222221111  1111256899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |..||++|||+.++++|.+.
T Consensus       246 l~~dp~~Rps~~~~l~h~~~  265 (304)
T 2jam_A          246 LEKDPNERYTCEKALSHPWI  265 (304)
T ss_dssp             HCSSTTTSCCHHHHHTSHHH
T ss_pred             cCCChhHCcCHHHHhcCccc
Confidence            99999999999999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.9e-38  Score=331.74  Aligned_cols=227  Identities=16%  Similarity=0.229  Sum_probs=190.2

Q ss_pred             cccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          138 SMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      +.||+|+||.||+|.+.    ++.||||+++..... ....+.+.+| ++|++++|||||++++++. .+.++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC-GGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccC
Confidence            57999999999999773    578999999864322 2345678889 9999999999999999986 456899999999


Q ss_pred             CCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------CCC
Q 039021          213 KGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------PNQ  268 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------~~~  268 (464)
                      +|+|.+++...+.+++..++.++.||+.                  |||++.++.+||+|||+|+......      ...
T Consensus       453 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~  532 (635)
T 4fl3_A          453 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  532 (635)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----------
T ss_pred             CCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCC
Confidence            9999999998889999999999999987                  9999999999999999999775322      122


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      .+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.. .+....+..+..+..+ ..+|+++.+||.+||+.
T Consensus       533 ~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~  611 (635)
T 4fl3_A          533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP-AGCPREMYDLMNLCWTY  611 (635)
T ss_dssp             --CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCS
T ss_pred             CCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCC
Confidence            36789999999999999999999999999999998 999999877 3333334344444433 66899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      ||++|||+.+|++.|+.+...
T Consensus       612 dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          612 DVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             STTTSCCHHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999999887544

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.3e-38  Score=307.15  Aligned_cols=235  Identities=19%  Similarity=0.255  Sum_probs=192.6

Q ss_pred             ccccccccccccccceeeeeEEeEE-------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW-------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      +...+|++.+.||+|+||.||+|++       .+..||+|++....  .......+.+| .++++++||||+++++++.+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  104 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence            3445799999999999999999984       26689999997532  24445678888 99999999999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc-------cCCCHHHHHHHHHHHHh------------------hhcccC---CCceeE
Q 039021          201 GEEMILITEYLPKGNLKGILSKK-------VRLDLPTALRYALDIAR------------------NLLQDE---GDHLKI  252 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl  252 (464)
                      .+..++||||+++|+|.+++...       ..+++.+++.++.|++.                  |||++.   +..+||
T Consensus       105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence            99999999999999999999764       34899999999999986                  999984   446999


Q ss_pred             ecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCC
Q 039021          253 GEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEP  325 (464)
Q Consensus       253 ~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~  325 (464)
                      +|||+++......     ....||+.|+|||++.+..++.++||||||+++|+|++ |..||.... .+....+.....+
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~  264 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM  264 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence            9999998765322     22347899999999999999999999999999999998 999998776 3333333333333


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .. +..+++.+.+||.+||+.||.+|||+.+++++|+.+..
T Consensus       265 ~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          265 DP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC-CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            32 36689999999999999999999999999999998854

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4.4e-39  Score=340.12  Aligned_cols=230  Identities=16%  Similarity=0.178  Sum_probs=196.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||+||+|+++  ++.||+|++++.........+.+..| .+|..+ +||||+++++++.+.+.+|||
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV  420 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV  420 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred             cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence            36999999999999999999985  77899999986433233344566777 888887 799999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc---ccCC
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE---QIHP  266 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~---~~~~  266 (464)
                      |||++||+|.+++...+.+++..++.|+.||+.                  |||++.++.+||+|||+|+...   ....
T Consensus       421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~  500 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK  500 (674)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBC
T ss_pred             EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccc
Confidence            999999999999998889999999999999987                  9999999999999999998643   2233


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ..+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+...+...+......++ ..+++++.+||++||++
T Consensus       501 ~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~lL~~  579 (674)
T 3pfq_A          501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP-KSMSKEAVAICKGLMTK  579 (674)
T ss_dssp             CCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC-TTSCHHHHHHHHHHSCS
T ss_pred             cccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC-ccCCHHHHHHHHHHccC
Confidence            45699999999999999999999999999999999999999998774433333333344444 56899999999999999


Q ss_pred             CCCCCCCH-----HHHHHHHH
Q 039021          347 DPSKRPTF-----AAVIITLE  362 (464)
Q Consensus       347 dp~~Rpt~-----~~i~~~l~  362 (464)
                      ||++||++     .+|++|.+
T Consensus       580 dP~~R~~~~~~~~~ei~~h~f  600 (674)
T 3pfq_A          580 HPGKRLGCGPEGERDIKEHAF  600 (674)
T ss_dssp             SSTTCTTCSTTHHHHHHSSGG
T ss_pred             CHHHCCCCCCCcHHHHhcCcc
Confidence            99999997     88888754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.2e-38  Score=309.23  Aligned_cols=232  Identities=22%  Similarity=0.328  Sum_probs=191.1

Q ss_pred             ccccccccccceeeeeEEeEEe--Cce--EEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTW--VVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~--vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|++.+.||+|+||.||+|+++  +..  ||+|.++..  ......+.+.+| ++++++ +||||+++++++.+.+..++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            7889999999999999999985  554  599998753  223345568888 999999 99999999999999999999


Q ss_pred             EEEecCCCChHHHHhhcc----------------CCCHHHHHHHHHHHHh------------------hhcccCCCceeE
Q 039021          207 ITEYLPKGNLKGILSKKV----------------RLDLPTALRYALDIAR------------------NLLQDEGDHLKI  252 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~----------------~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl  252 (464)
                      ||||+++|+|.+++....                .+++.+++.++.|++.                  |||++.++.+||
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL  183 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  183 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEE
Confidence            999999999999997653                7999999999999987                  999999999999


Q ss_pred             ecchhhhhhcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCcc
Q 039021          253 GEYWVQMFYEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQ  328 (464)
Q Consensus       253 ~DFG~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~  328 (464)
                      +|||+++......  ....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+... +..........+.. 
T Consensus       184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~-  262 (327)
T 1fvr_A          184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-  262 (327)
T ss_dssp             CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCC-
T ss_pred             cccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCC-
Confidence            9999998654332  22347889999999998899999999999999999998 9999988763 33333333323332 


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +..+++++.+||.+||+.||++|||+.+++++|+.+...
T Consensus       263 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          263 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999988653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=6e-39  Score=329.01  Aligned_cols=231  Identities=14%  Similarity=0.161  Sum_probs=193.1

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      ..+|.+.+.||+|+||.||+|+++  |+.||+|++.+...........+..| .+|++++||||+++++++.+.+.+|+|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            347999999999999999999984  89999999986433223334567888 999999999999999999999999999


Q ss_pred             EEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          208 TEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||++||+|.+++...    ..+++..++.++.||+.                  |||++.+|.+||+|||+++......
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~  343 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ  343 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence            9999999999999753    47999999999999986                  9999999999999999998765432


Q ss_pred             ---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhccccccCCCCccCCCCcHHHHH
Q 039021          266 ---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                         ...+||+.|+|||++.+..|+.++|||||||++|||++|+.||.....    ..+..........++ ..+++++.+
T Consensus       344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~  422 (543)
T 3c4z_A          344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP-DKFSPASKD  422 (543)
T ss_dssp             CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC-TTSCHHHHH
T ss_pred             cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC-cccCHHHHH
Confidence               234699999999999999999999999999999999999999987531    112222222233343 568999999


Q ss_pred             HHHHHcccCCCCCCCH-----HHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTF-----AAVIITLE  362 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~-----~~i~~~l~  362 (464)
                      ||.+||+.||++||++     .+|++|.+
T Consensus       423 li~~lL~~dP~~R~~~~~~~a~ei~~Hpf  451 (543)
T 3c4z_A          423 FCEALLQKDPEKRLGFRDGSCDGLRTHPL  451 (543)
T ss_dssp             HHHHHSCSSGGGSCCCBTTBSHHHHTSGG
T ss_pred             HHHHhccCCHhHCCCCcccCHHHHHcCcc
Confidence            9999999999999964     78888753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=6e-39  Score=312.22  Aligned_cols=224  Identities=16%  Similarity=0.114  Sum_probs=190.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH-----HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV-----KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~-----~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|++.+.||+|+||.||+|+++  ++.||+|++........     .....+.+| .+|++++||||+++++++.+.+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            36999999999999999999984  88999999987543221     133467788 99999999999999999999999


Q ss_pred             eEEEEEecCCC-ChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 MILITEYLPKG-NLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 ~~lv~E~~~~g-~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      +++||||+.+| +|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++.....
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  183 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG  183 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC
Confidence            99999999777 99999998889999999999999987                  999999999999999999876543


Q ss_pred             C--CCCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHH
Q 039021          265 H--PNQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIA  341 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (464)
                      .  ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.........      . ...+..+++++.+||.
T Consensus       184 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~------~-~~~~~~~~~~l~~li~  256 (335)
T 3dls_A          184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA------A-IHPPYLVSKELMSLVS  256 (335)
T ss_dssp             CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTT------C-CCCSSCCCHHHHHHHH
T ss_pred             CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhh------c-cCCCcccCHHHHHHHH
Confidence            3  23459999999999988776 78999999999999999999999764321110      1 1122458999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||+.||++|||+.++++|.+
T Consensus       257 ~~L~~dP~~Rps~~ell~hp~  277 (335)
T 3dls_A          257 GLLQPVPERRTTLEKLVTDPW  277 (335)
T ss_dssp             HHTCSSGGGSCCHHHHHHCTT
T ss_pred             HHccCChhhCcCHHHHhcCcc
Confidence            999999999999999999865

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.3e-39  Score=307.29  Aligned_cols=230  Identities=20%  Similarity=0.232  Sum_probs=187.5

Q ss_pred             cccccccccccccceeeeeEEeEEe--C-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--G-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV  199 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~  199 (464)
                      ...+|.+.+.||+|+||.||+|+++  +       ..||+|++....   ....+.+.+| .++++++||||+++++++.
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   82 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGVCV   82 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence            3457999999999999999999985  3       579999997632   3345678889 9999999999999999999


Q ss_pred             eCCceEEEEEecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCCc--------eeE
Q 039021          200 LGEEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGDH--------LKI  252 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~~--------~kl  252 (464)
                      +++..++||||+++|+|.+++...+ .+++..++.++.|++.                  |||++.++.        +||
T Consensus        83 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence            9999999999999999999998754 4999999999999987                  999998887        999


Q ss_pred             ecchhhhhhcccCCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhC-CCCCCCCccchhccccccCCCCccCC
Q 039021          253 GEYWVQMFYEQIHPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEG-KHLQTNNSFDFMHLKSVNFEPKFQIS  330 (464)
Q Consensus       253 ~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~  330 (464)
                      +|||++....... ...||+.|+|||++.+ ..++.++|||||||++|||++| ..||............. .....+ .
T Consensus       163 ~Dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~-~  239 (289)
T 4fvq_A          163 SDPGISITVLPKD-ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLP-A  239 (289)
T ss_dssp             CCCCSCTTTSCHH-HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCC-C
T ss_pred             ccCcccccccCcc-ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh-ccCCCC-C
Confidence            9999987654321 2348899999999987 7789999999999999999995 55555544222211111 122222 4


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ..++++.+|+.+||+.||++|||+.+++++|+.+.
T Consensus       240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            46788999999999999999999999999998763

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.7e-38  Score=315.43  Aligned_cols=234  Identities=15%  Similarity=0.125  Sum_probs=189.2

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC--CCceeeeeceeeeCC
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR--HPNILQFLGSIVLGE  202 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~--hpnIv~~~~~~~~~~  202 (464)
                      +.....+|.+.+.||+|+||.||+|.+. ++.||+|++..... .....+.+.+| .+|++++  ||||+++++++...+
T Consensus        51 ~~~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             ccccCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence            3344456999999999999999999985 88999999986543 24456778889 9999996  599999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+||||| +.+|+|.+++.....+++.++..++.||+.                  |||++ ++.+||+|||+++.....
T Consensus       130 ~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          130 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             EEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             EEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            9999999 567899999998889999999999999987                  99995 588999999999876532


Q ss_pred             C-----CCCcCCCCccccccccc-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhccccc-cCCC
Q 039021          265 H-----PNQENSQRNDNSSIASN-----------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLKSV-NFEP  325 (464)
Q Consensus       265 ~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~~~-~~~~  325 (464)
                      .     ....||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....  ........ ....
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~  287 (390)
T 2zmd_A          208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  287 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred             CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence            2     34459999999999865           4688999999999999999999999987542  22222221 1222


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .++ ...++++.+||.+||+.||++|||+.++++|.+..
T Consensus       288 ~~~-~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          288 EFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             CCC-CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCC-ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence            222 44588999999999999999999999999997754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-38  Score=306.18  Aligned_cols=226  Identities=16%  Similarity=0.166  Sum_probs=181.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||+||+|++.  ++.||+|++.............+.++ .+.+..+||||+++++++.+++.+++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            47999999999999999999985  89999999876544444444444444 4455559999999999999999999999


Q ss_pred             EecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--CC
Q 039021          209 EYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--~~  267 (464)
                      ||+ +|+|.+++... ..+++..+..++.|++.                  |||++.++.+||+|||+++......  ..
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  215 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV  215 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence            999 66999888654 56999999999999987                  9999999999999999998765432  23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ..||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ...+..  ...++.+ ...+++++.+||.+||+.
T Consensus       216 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~l~~li~~~L~~  291 (311)
T 3p1a_A          216 QEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ--GYLPPEF-TAGLSSELRSVLVMMLEP  291 (311)
T ss_dssp             CCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT--TCCCHHH-HTTSCHHHHHHHHHHSCS
T ss_pred             cCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc--cCCCccc-ccCCCHHHHHHHHHHcCC
Confidence            459999999998876 78999999999999999999976665443 221111  1111222 256899999999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLE  362 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~  362 (464)
                      ||++|||+.++++|.+
T Consensus       292 dP~~Rpt~~ell~hp~  307 (311)
T 3p1a_A          292 DPKLRATAEALLALPV  307 (311)
T ss_dssp             STTTSCCHHHHHTSGG
T ss_pred             ChhhCcCHHHHHhCcc
Confidence            9999999999998754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.1e-39  Score=312.93  Aligned_cols=234  Identities=13%  Similarity=0.067  Sum_probs=186.3

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc--hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH--PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~--~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ...+|++.+.||+|+||.||+|.++  +..||+|++......  .....+.+.+| .++++++||||+++++++.+.+..
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  103 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI  103 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeE
Confidence            3457999999999999999999984  789999999754211  23445678889 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhh----------------------------------------ccCCCHHHHHHHHHHHHh----
Q 039021          205 ILITEYLPKGNLKGILSK----------------------------------------KVRLDLPTALRYALDIAR----  240 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~----------------------------------------~~~l~~~~~~~~~~qi~~----  240 (464)
                      ++||||+++|+|.+++..                                        ...+++..+..++.|++.    
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  183 (345)
T 3hko_A          104 CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY  183 (345)
T ss_dssp             EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence            999999999999999852                                        112357778889999986    


Q ss_pred             --------------hhcccCCC--ceeEecchhhhhhccc-------CCCCcCCCCccccccccc--CCCCCcccchhHH
Q 039021          241 --------------NLLQDEGD--HLKIGEYWVQMFYEQI-------HPNQENSQRNDNSSIASN--VLDDTKKDICSFG  295 (464)
Q Consensus       241 --------------Nill~~~~--~~kl~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG  295 (464)
                                    |||++.++  .+||+|||+++.....       .....||+.|+|||++.+  ..++.++||||||
T Consensus       184 LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  263 (345)
T 3hko_A          184 LHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG  263 (345)
T ss_dssp             HHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred             HHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence                          99998776  8999999999876432       123459999999999875  6789999999999


Q ss_pred             HHHHHHHhCCCCCCCCcc-chhccccccC-CCCc-cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          296 YIFYQMLEGKHLQTNNSF-DFMHLKSVNF-EPKF-QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       296 v~l~el~~g~~p~~~~~~-~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |++|||++|+.||.+... +......... .... ....+++++.+||.+||+.||.+|||+.++++|.+.
T Consensus       264 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~  334 (345)
T 3hko_A          264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI  334 (345)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHH
T ss_pred             HHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhh
Confidence            999999999999988762 2222222111 1111 113479999999999999999999999999998764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.5e-38  Score=301.73  Aligned_cols=231  Identities=20%  Similarity=0.204  Sum_probs=191.6

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|+++.......   ...+.+.+| .++++++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46899999999999999999985  88999999986543221   124578889 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC----ceeEecchhhhhhcc
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD----HLKIGEYWVQMFYEQ  263 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~----~~kl~DFG~a~~~~~  263 (464)
                      +||||+++++|.+++.....+++.++..++.|+++                  ||+++.++    .+||+|||+++....
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            99999999999999988889999999999999987                  99998877    799999999987653


Q ss_pred             cC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCcc---CCCCcHHHH
Q 039021          264 IH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQ---ISRCPNRLK  337 (464)
Q Consensus       264 ~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~  337 (464)
                      ..  ....||+.|+|||++.+..++.++||||||+++|+|++|..||...... ....... ....++   ...+++.+.
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  243 (283)
T 3bhy_A          165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA-VNYDFDEEYFSNTSELAK  243 (283)
T ss_dssp             -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-TCCCCCHHHHTTCCHHHH
T ss_pred             CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh-cccCCcchhcccCCHHHH
Confidence            32  2345999999999999999999999999999999999999999887622 2222111 111111   156789999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +|+.+||..||++|||+.++++|.+.
T Consensus       244 ~li~~~l~~dp~~Rps~~~~l~h~~~  269 (283)
T 3bhy_A          244 DFIRRLLVKDPKRRMTIAQSLEHSWI  269 (283)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHCHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHhCHHH
Confidence            99999999999999999999998653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.7e-38  Score=325.32  Aligned_cols=230  Identities=16%  Similarity=0.161  Sum_probs=187.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|+++  +..||+|++....... .....+.+| .+|+.++||||+++++++.+.+.+|+||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            36999999999999999999985  8899999998653222 224567888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~~~--  265 (464)
                      |||++|+|.+++.....+++..+..++.||+.                  |||++..   +.+||+|||+|+......  
T Consensus       116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~  195 (494)
T 3lij_A          116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM  195 (494)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc
Confidence            99999999999988889999999999999987                  9999764   459999999998766432  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCcc---CCCCcHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQ---ISRCPNRLKQLIA  341 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~li~  341 (464)
                      ....||+.|+|||++. ..|+.++|||||||++|+|++|..||.+.... ....+..+ ...++   ...+|+++.+||.
T Consensus       196 ~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~  273 (494)
T 3lij_A          196 KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG-KYTFDSPEWKNVSEGAKDLIK  273 (494)
T ss_dssp             CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCSGGGTTSCHHHHHHHH
T ss_pred             cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCchhcccCCHHHHHHHH
Confidence            3445999999999886 56999999999999999999999999987733 22222221 11111   1468999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +||+.||.+|||+.++++|.+..
T Consensus       274 ~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          274 QMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             HHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             HHCCCChhhCccHHHHhcCcccc
Confidence            99999999999999999996643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.1e-38  Score=304.38  Aligned_cols=228  Identities=17%  Similarity=0.184  Sum_probs=183.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||+|+++  ++.||+|++...... ......+.+| .++++++||||+++++++.+++.+++|||
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            6889999999999999999984  889999999865432 3345667788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+++ +|.+++. ..+.+++..+..++.|++.                  |||++.++.+||+|||+++......   ..
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA  160 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCS
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccC
Confidence            9986 6655554 4678999999999999987                  9999999999999999998765322   33


Q ss_pred             CcCCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCC-CCc-cchhccccc--cC-----------------CC
Q 039021          268 QENSQRNDNSSIASNVL-DDTKKDICSFGYIFYQMLEGKHLQT-NNS-FDFMHLKSV--NF-----------------EP  325 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~el~~g~~p~~-~~~-~~~~~~~~~--~~-----------------~~  325 (464)
                      ..||+.|+|||++.+.. ++.++|||||||++|+|++|..||. +.. .+....+..  +.                 .+
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T 3o0g_A          161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence            45899999999997755 8999999999999999999888753 333 111111100  00                 00


Q ss_pred             C--------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          326 K--------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       326 ~--------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .        .....+++++.+||.+||+.||++|||+.|+++|.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  285 (292)
T 3o0g_A          241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence            0        001347899999999999999999999999999854

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2e-38  Score=302.00  Aligned_cols=228  Identities=21%  Similarity=0.242  Sum_probs=184.1

Q ss_pred             ccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +|++.+.||+|+||.||+|++. ++.||+|++..... .......+.+| .++++++||||+++++++.+.+..++||||
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            6889999999999999999985 88999999975432 22233567788 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          211 LPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       211 ~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      +++ +|.+++.. .+.+++..+..++.|+++                  |||++.++.+||+|||+++......   ...
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence            986 99999875 368999999999999987                  9999999999999999998775322   234


Q ss_pred             cCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc-----------------cCCCCc--
Q 039021          269 ENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV-----------------NFEPKF--  327 (464)
Q Consensus       269 ~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~-----------------~~~~~~--  327 (464)
                      .||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+... +.......                 ...+.+  
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T 1ob3_A          161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (288)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence            58999999999976 4689999999999999999999999987651 11111000                 000000  


Q ss_pred             --------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 --------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 --------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                              ....+++++.+||.+||+.||++|||+.++++|.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  283 (288)
T 1ob3_A          241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY  283 (288)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence                    01347899999999999999999999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=310.32  Aligned_cols=234  Identities=15%  Similarity=0.131  Sum_probs=189.1

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC--CceeeeeceeeeCC
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH--PNILQFLGSIVLGE  202 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h--pnIv~~~~~~~~~~  202 (464)
                      +.....+|++.+.||+|+||.||+|.+. ++.||+|++...... ......+.+| .+|++++|  |||+++++++.+++
T Consensus         4 i~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~   82 (343)
T 3dbq_A            4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ   82 (343)
T ss_dssp             EESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             eeeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc-hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence            4455567999999999999999999884 889999999865432 4455778889 99999976  99999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .++|||| +.+|+|.+++...+.+++.++..++.|++.                  |||++ ++.+||+|||+++.....
T Consensus        83 ~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           83 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             EEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            9999999 557899999998889999999999999987                  99996 678999999999876533


Q ss_pred             C-----CCCcCCCCccccccccc-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCccc--hhcccc-ccCCC
Q 039021          265 H-----PNQENSQRNDNSSIASN-----------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKS-VNFEP  325 (464)
Q Consensus       265 ~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~--~~~~~~-~~~~~  325 (464)
                      .     ....||+.|+|||++.+           ..++.++|||||||++|||++|+.||......  ...... .....
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  240 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  240 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc
Confidence            2     23459999999999865           67889999999999999999999999875421  122211 12222


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .++ ...++++.+||.+||+.||.+|||+.++++|.+..
T Consensus       241 ~~~-~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          241 EFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             CCC-CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCc-ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            222 45678999999999999999999999999998754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.1e-38  Score=301.51  Aligned_cols=229  Identities=20%  Similarity=0.179  Sum_probs=190.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++.....  ....+.+.+| .+++.++||||+++++++.+.+..++||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            36899999999999999999985  88999999985432  2345678889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----C
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----H  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----~  265 (464)
                      ||+++|+|.+++.....+++..+..++.|++.                  ||+++.++.+||+|||++......     .
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  164 (276)
T 2yex_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (276)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence            99999999999988888999999999999987                  999999999999999999865422     2


Q ss_pred             CCCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccc--hhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||......  .............+...+++.+.+||.+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHH
Confidence            34459999999999987665 67899999999999999999999876521  1111111111111224589999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ||+.||++|||+.++++|.+
T Consensus       245 ~l~~~p~~Rps~~~il~~~~  264 (276)
T 2yex_A          245 ILVENPSARITIPDIKKDRW  264 (276)
T ss_dssp             HSCSSTTTSCCHHHHTTCTT
T ss_pred             HCCCCchhCCCHHHHhcCcc
Confidence            99999999999999998754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=2.4e-38  Score=303.54  Aligned_cols=230  Identities=19%  Similarity=0.229  Sum_probs=195.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|++.+.||+|+||.||+|++.  ++.||+|++.....  ....+.+.+| .++++++||||+++++++.+.+..++||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            45899999999999999999984  88999999986532  2335678888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      ||+++++|.+++.. +.+++..+..++.|++.                  ||+++.++.+||+|||++.......   ..
T Consensus       100 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  178 (303)
T 3a7i_A          100 EYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  178 (303)
T ss_dssp             ECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred             EeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence            99999999999875 57999999999999987                  9999999999999999998765432   23


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ..||+.|+|||++.+..++.++||||||+++|+|++|..||..... ...........+.. ...+++.+.+||.+||+.
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~  257 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL-EGNYSKPLKEFVEACLNK  257 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-CSSCCHHHHHHHHHHCCS
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCC-ccccCHHHHHHHHHHcCC
Confidence            4599999999999999999999999999999999999999987662 22222222223332 356899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ||++|||+.++++|.+...
T Consensus       258 dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          258 EPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             SGGGSCCHHHHTTCHHHHH
T ss_pred             ChhhCcCHHHHhhChhhhc
Confidence            9999999999999987653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=7.8e-39  Score=303.12  Aligned_cols=230  Identities=18%  Similarity=0.237  Sum_probs=190.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCceEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEMIL  206 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~~l  206 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|.+...... ....+.+.+| .++++++||||+++++++.+  .+..++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            47999999999999999999984  889999999865433 3456678889 99999999999999998854  567999


Q ss_pred             EEEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh-----------------------hhcccCCCceeEecchhhh
Q 039021          207 ITEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR-----------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~-----------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      ||||+++|+|.+++...    ..+++..++.++.|++.                       |||++.++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            99999999999999753    34999999999999875                       8999999999999999998


Q ss_pred             hhcccC---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHH
Q 039021          260 FYEQIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       260 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ......   ....||+.|+|||++.+..++.++||||||+++|+|++|..||..... +....+..+..+..+ ..++++
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~  243 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP-YRYSDE  243 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCC-TTSCHH
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCC-cccCHH
Confidence            765432   123489999999999998999999999999999999999999988763 222233233233333 568999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +.++|.+||+.||++|||+.+|+++++.
T Consensus       244 l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          244 LNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            9999999999999999999999988653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.3e-38  Score=302.84  Aligned_cols=228  Identities=20%  Similarity=0.207  Sum_probs=183.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|.+.+.||+|+||.||+|+++  +..||+|++.....  ....+.+.+| +++++++||||+++++++.+.+..++||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            36999999999999999999984  88999999986532  2224567889 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcc
Q 039021          209 EYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       209 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~  263 (464)
                      ||+++|+|.+++..    ...+++..+..++.|++.                  |||+   +.++.+||+|||+++....
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~  179 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS  179 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence            99999999999854    367999999999999987                  9999   4457899999999987653


Q ss_pred             c--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCc--cCCCCcHHHHHH
Q 039021          264 I--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF--QISRCPNRLKQL  339 (464)
Q Consensus       264 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l  339 (464)
                      .  .....||+.|+|||++. ..++.++||||||+++|+|++|+.||.+..............+.+  ....+++++.+|
T Consensus       180 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  258 (285)
T 3is5_A          180 DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDL  258 (285)
T ss_dssp             -------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHH
T ss_pred             cccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHH
Confidence            3  23445999999999876 568899999999999999999999998876332222211111111  224478999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      |.+||+.||++|||+.|+++|.+
T Consensus       259 i~~~L~~dP~~Rps~~e~l~hp~  281 (285)
T 3is5_A          259 LKQMLTKDPERRPSAAQVLHHEW  281 (285)
T ss_dssp             HHHHTCSCTTTSCCHHHHHTSGG
T ss_pred             HHHHccCChhhCcCHHHHhcCHH
Confidence            99999999999999999998754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.2e-38  Score=309.53  Aligned_cols=232  Identities=14%  Similarity=0.118  Sum_probs=191.6

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|++  .++.||+|++.....     ...+.+| ++++++ +||||+++++++.+++..++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv   83 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV   83 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence            4799999999999999999997  489999999986422     2357788 999999 999999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCc-----eeEecchhhhhhcc
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDH-----LKIGEYWVQMFYEQ  263 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~-----~kl~DFG~a~~~~~  263 (464)
                      |||+ +|+|.+++.. .+.+++..++.++.|++.                  |||++.++.     +||+|||+++....
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            9999 8999999976 468999999999999987                  999998887     99999999987653


Q ss_pred             cC----------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch----hcccccc---CCCC
Q 039021          264 IH----------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF----MHLKSVN---FEPK  326 (464)
Q Consensus       264 ~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~----~~~~~~~---~~~~  326 (464)
                      ..          ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....    ...+...   ....
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  242 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE  242 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH
Confidence            22          24459999999999999999999999999999999999999998754211    1111110   1111


Q ss_pred             ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          327 FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       327 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      .....+| ++.+++.+||+.||.+||++.+|.+.|+.+......
T Consensus       243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~  285 (330)
T 2izr_A          243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY  285 (330)
T ss_dssp             HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            1113356 999999999999999999999999999988765543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.2e-38  Score=306.02  Aligned_cols=233  Identities=21%  Similarity=0.304  Sum_probs=194.1

Q ss_pred             cccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--Cce
Q 039021          134 TLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--EEM  204 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~~~  204 (464)
                      |++.+.||+|+||.||++.+      .++.||+|+++...  .....+.+.+| +++++++||||+++++++.+.  ..+
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  110 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL  110 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence            58999999999999999876      37899999998652  34556778899 999999999999999999884  578


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ++||||+++|+|.+++... .+++..++.++.|++.                  |||++.++.+||+|||+++...... 
T Consensus       111 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          111 QLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             EEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred             EEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence            9999999999999999765 5999999999999987                  9999999999999999998765322 


Q ss_pred             -----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----------------hhccccccCC
Q 039021          266 -----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----------------FMHLKSVNFE  324 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----------------~~~~~~~~~~  324 (464)
                           ....||+.|+|||++.+..++.++||||||+++|+|++|..||......                ..........
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER  269 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC
Confidence                 2334888999999999989999999999999999999999999764311                1111112222


Q ss_pred             CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       325 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ... +..+++++.+||.+||+.||++|||+.++++.|+.+.+.+..
T Consensus       270 ~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  314 (318)
T 3lxp_A          270 LPR-PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG  314 (318)
T ss_dssp             CCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             CCC-CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence            222 356899999999999999999999999999999998776654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.5e-39  Score=312.18  Aligned_cols=225  Identities=16%  Similarity=0.157  Sum_probs=186.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++.....       ...+| +++.++ +||||+++++++.+++.+|+|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv   94 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV   94 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence            36999999999999999999985  88999999986432       23456 777777 799999999999999999999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC----CceeEecchhhhhhccc-
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG----DHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~----~~~kl~DFG~a~~~~~~-  264 (464)
                      ||||+||+|.+++...+.+++.++..++.||+.                  |||+.+.    +.+||+|||+++..... 
T Consensus        95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            999999999999988889999999999999987                  9997443    34999999999876533 


Q ss_pred             --CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc----cchhccccccCCCCcc---CCCCcHH
Q 039021          265 --HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKFQ---ISRCPNR  335 (464)
Q Consensus       265 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~  335 (464)
                        ....+||+.|+|||++.+..|+.++|||||||++|+|++|..||....    .+....+.. ....++   ...++++
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~  253 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS-GKFSLSGGYWNSVSDT  253 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH-CCCCCCSTTTTTSCHH
T ss_pred             CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc-CCcccCccccccCCHH
Confidence              234569999999999998889999999999999999999999998642    122222211 111111   1458999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.+||.+||..||++|||+.++++|.+..
T Consensus       254 ~~~li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          254 AKDLVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence            99999999999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.5e-38  Score=301.43  Aligned_cols=235  Identities=22%  Similarity=0.401  Sum_probs=182.2

Q ss_pred             cccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ++...+|++.+.||+|+||.||+|++++ .||+|+++.... .....+.+.+| .++++++||||+++++++ ..+..++
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l   96 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI   96 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence            4445579999999999999999998765 499999986543 34556778899 999999999999999955 5667899


Q ss_pred             EEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||||+++++|.+++.. ...+++.+++.++.|++.                  |||++.++.+||+|||+++......  
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A           97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence            9999999999999964 467999999999999986                  9999999999999999998655321  


Q ss_pred             ---CCCcCCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cc-hhccccccC-CCC--ccCCCCcH
Q 039021          266 ---PNQENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FD-FMHLKSVNF-EPK--FQISRCPN  334 (464)
Q Consensus       266 ---~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~-~~~~~~~~~-~~~--~~~~~~~~  334 (464)
                         ....||+.|+|||++.   +..++.++||||||+++|+|++|+.||.... .. ......... .+.  .....+|+
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK  256 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCH
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCH
Confidence               2334999999999986   5678889999999999999999999998755 22 222211111 111  11246899


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ++.+||.+||+.||++|||+.++++.|+.+.
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999998763

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.2e-38  Score=329.02  Aligned_cols=234  Identities=23%  Similarity=0.344  Sum_probs=196.3

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      ..|++.  ..+|++.+.||+|+||.||+|.++ +..||||+++.....    .+.+.+| ++|++++||||+++++++.+
T Consensus       260 ~~~~i~--~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~  333 (535)
T 2h8h_A          260 DAWEIP--RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE  333 (535)
T ss_dssp             TCSBCC--GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cceecc--hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            344444  447889999999999999999997 567999999865322    3468889 99999999999999999876


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                       +.++|||||+++|+|.++++..  ..+++.+++.++.||++                  |||++.++.+||+|||+++.
T Consensus       334 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  412 (535)
T 2h8h_A          334 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  412 (535)
T ss_dssp             -SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred             -ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence             7789999999999999999753  56999999999999987                  99999999999999999987


Q ss_pred             hccc----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcH
Q 039021          261 YEQI----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       261 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ....    .....++..|+|||++.+..++.++|||||||++|||++ |+.||.+.. .+....+..+.+...+ ..+++
T Consensus       413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~-~~~~~  491 (535)
T 2h8h_A          413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP-PECPE  491 (535)
T ss_dssp             CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCH
T ss_pred             cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCH
Confidence            6532    223347889999999999999999999999999999999 999998876 3344333344344333 56899


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ++.+||.+||+.||++|||+.+|++.|+.+
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999998865

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=6.2e-39  Score=310.86  Aligned_cols=219  Identities=18%  Similarity=0.196  Sum_probs=166.0

Q ss_pred             ccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEEecC
Q 039021          137 SSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      .+.||+|+||.||+|.++  ++.||+|++...      ....+.+| .+++.+. ||||+++++++.+....|+||||++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~   89 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN   89 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence            378999999999999985  889999999753      23456678 9999997 9999999999999999999999999


Q ss_pred             CCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC---ceeEecchhhhhhccc---CCCC
Q 039021          213 KGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD---HLKIGEYWVQMFYEQI---HPNQ  268 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~---~~kl~DFG~a~~~~~~---~~~~  268 (464)
                      +|+|.+++...+.+++.++..++.|++.                  |||++.++   .+||+|||+++.....   ....
T Consensus        90 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  169 (325)
T 3kn6_A           90 GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP  169 (325)
T ss_dssp             SCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccccc
Confidence            9999999998889999999999999987                  99998765   7999999999865432   2344


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc--------chhccccccCCCCccC---CCCcHHHH
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--------DFMHLKSVNFEPKFQI---SRCPNRLK  337 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~  337 (464)
                      .||+.|+|||++.+..++.++|||||||++|+|++|..||.....        +....+.. ....++.   ..+++++.
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~~~  248 (325)
T 3kn6_A          170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-GDFSFEGEAWKNVSQEAK  248 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT-TCCCCCSHHHHTSCHHHH
T ss_pred             CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc-CCCCCCcccccCCCHHHH
Confidence            589999999999999999999999999999999999999986541        11122211 1222221   35799999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||.+||+.||++|||+.++++|.|
T Consensus       249 ~li~~~L~~dP~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          249 DLIQGLLTVDPNKRLKMSGLRYNEW  273 (325)
T ss_dssp             HHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred             HHHHHHCCCChhHCCCHHHHhcChh
Confidence            9999999999999999999998865

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=305.88  Aligned_cols=229  Identities=15%  Similarity=0.175  Sum_probs=185.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  |+.||+|++.... ......+.+.+| +++++++||||+++++++.+.+..++|||
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            6889999999999999999985  8899999987653 233445677888 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+++++|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++......   ...
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (311)
T 4agu_A           83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE  162 (311)
T ss_dssp             CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred             eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCC
Confidence            9999999999988888999999999999986                  9999999999999999998765322   234


Q ss_pred             cCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------ccCCCC
Q 039021          269 ENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------VNFEPK  326 (464)
Q Consensus       269 ~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~~~~~~  326 (464)
                      .||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+... +......                    .....+
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (311)
T 4agu_A          163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP  242 (311)
T ss_dssp             ---GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCC
T ss_pred             cCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCC
Confidence            59999999999976 6789999999999999999999999987651 1111000                    000000


Q ss_pred             c---------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          327 F---------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       327 ~---------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .         ..+.+++++.+||.+||+.||++|||+.++++|.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  287 (311)
T 4agu_A          243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY  287 (311)
T ss_dssp             CCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred             CccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChH
Confidence            0         01457889999999999999999999999999854

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4e-38  Score=301.07  Aligned_cols=234  Identities=13%  Similarity=0.098  Sum_probs=193.4

Q ss_pred             ccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ..+|++.+.||+|+||.||+|++  .++.||+|++....     ....+.+| .+++++ +|+||+++++++.+....++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   83 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   83 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence            34699999999999999999997  48999999997532     22357788 999999 89999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCc-----eeEecchhhhhhc
Q 039021          207 ITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDH-----LKIGEYWVQMFYE  262 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~-----~kl~DFG~a~~~~  262 (464)
                      ||||+ +++|.+++... ..+++.++..++.|++.                  |||++.++.     +||+|||+++...
T Consensus        84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            99999 89999999864 46999999999999987                  999987766     9999999998765


Q ss_pred             ccC----------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhcccccc---CCC
Q 039021          263 QIH----------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKSVN---FEP  325 (464)
Q Consensus       263 ~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~~~---~~~  325 (464)
                      ...          ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....    .........   ...
T Consensus       163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (298)
T 1csn_A          163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL  242 (298)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred             cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence            432          233499999999999999999999999999999999999999987541    111111110   111


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ......+|+++.+|+.+||+.||++|||+.+|++.|+.+...+..
T Consensus       243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~  287 (298)
T 1csn_A          243 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT  287 (298)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence            111246899999999999999999999999999999998776554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5.5e-38  Score=298.87  Aligned_cols=236  Identities=12%  Similarity=0.177  Sum_probs=181.8

Q ss_pred             cccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ++...+|++.+.||+|+||.||+|++  +++.||+|++..... .....+.+.++ ..++.++||||+++++++.+++..
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            34455899999999999999999998  489999999986432 23334445555 678889999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhh
Q 039021          205 ILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      ++||||+++ +|.+++..    ...+++..++.++.|++.                   |||++.++.+||+|||+++..
T Consensus        82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            999999985 88777753    468999999999999986                   999999999999999999877


Q ss_pred             cccC--CCCcCCCCccccccc----ccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCc
Q 039021          262 EQIH--PNQENSQRNDNSSIA----SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCP  333 (464)
Q Consensus       262 ~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~  333 (464)
                      ....  ....||+.|+|||++    .+..++.++|||||||++|+|++|+.||....  ............+..+...++
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS  240 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred             cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence            6433  233599999999996    55678899999999999999999999998643  222333333334444446689


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +++.+|+.+||+.||++|||+.++++|.+.-.
T Consensus       241 ~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          241 AEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            99999999999999999999999999877553

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.4e-38  Score=310.55  Aligned_cols=231  Identities=16%  Similarity=0.170  Sum_probs=191.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc-----hHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH-----PVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGE  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~-----~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~  202 (464)
                      .+|.+.+.||+|+||.||+|+++  |+.||||++......     .....+.+.+| .+++++ +||||+++++++...+
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            46899999999999999999984  889999999864311     12334567788 999999 8999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..++||||++||+|.+++.....+++..+..++.||+.                  |||++.++.+||+|||++......
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~  253 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG  253 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred             EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCC
Confidence            99999999999999999988889999999999999987                  999999999999999999876533


Q ss_pred             --CCCCcCCCCccccccccc------CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-CCCcc-CCCCc
Q 039021          265 --HPNQENSQRNDNSSIASN------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-EPKFQ-ISRCP  333 (464)
Q Consensus       265 --~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~~~~~-~~~~~  333 (464)
                        .....||+.|+|||++.+      ..++.++|||||||++|+|++|..||..... .....+.... ....+ ...++
T Consensus       254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  333 (365)
T 2y7j_A          254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRS  333 (365)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSC
T ss_pred             cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCC
Confidence              234569999999999863      3588999999999999999999999987662 2222222111 11111 14578


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +++.+||.+||+.||++|||+.++++|.+
T Consensus       334 ~~~~~li~~~L~~dP~~Rps~~ell~hp~  362 (365)
T 2y7j_A          334 STVKDLISRLLQVDPEARLTAEQALQHPF  362 (365)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence            99999999999999999999999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2.1e-38  Score=324.00  Aligned_cols=231  Identities=19%  Similarity=0.189  Sum_probs=191.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||+||+|+++  ++.||+|++....... .....+.+| .+|++++||||+++++++.+.+.+++||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            46999999999999999999985  8899999997532211 224567888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc---CCCceeEecchhhhhhcccC--
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD---EGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~---~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |||++|+|.+++...+.+++..+..++.||+.                  |||++   .++.+||+|||+++......  
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence            99999999999988889999999999999987                  99995   45679999999998765432  


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-CCCcc-CCCCcHHHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-EPKFQ-ISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~~li~~  342 (464)
                      ....||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+... +....+..+. ....+ ...+|+++.+||.+
T Consensus       181 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  259 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (486)
T ss_dssp             -CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHH
T ss_pred             CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHH
Confidence            34459999999999875 589999999999999999999999988763 3332222211 11111 14579999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||+.||.+|||+.++++|.+..
T Consensus       260 ~L~~dp~~R~t~~~~l~hp~~~  281 (486)
T 3mwu_A          260 MLTFHPSLRITATQCLEHPWIQ  281 (486)
T ss_dssp             HTCSSTTTSCCHHHHHHCHHHH
T ss_pred             HcCCChhhCcCHHHHhcCHhhc
Confidence            9999999999999999997653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=5e-39  Score=311.58  Aligned_cols=238  Identities=19%  Similarity=0.279  Sum_probs=189.2

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ..++.....+|.+.+.||+|+||.||+|++. ++.||+|++.....  ......+.+| .++++++||||+++++++.+.
T Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   99 (326)
T 3uim_A           22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP   99 (326)
T ss_dssp             THHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred             HHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC--chHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence            3445556668999999999999999999874 88999999986432  1122357888 999999999999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh---------------------hhcccCCCceeEecch
Q 039021          202 EEMILITEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR---------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~---------------------Nill~~~~~~kl~DFG  256 (464)
                      +..++||||+++|+|.+++...    ..+++..+..++.|++.                     |||++.++.+||+|||
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  179 (326)
T 3uim_A          100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG  179 (326)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred             CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence            9999999999999999999764    34999999999999975                     9999999999999999


Q ss_pred             hhhhhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc------cchhccc---cccC
Q 039021          257 VQMFYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS------FDFMHLK---SVNF  323 (464)
Q Consensus       257 ~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~------~~~~~~~---~~~~  323 (464)
                      +++......    ....||+.|+|||++.+..++.++|||||||++|+|++|+.||....      .......   ....
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  259 (326)
T 3uim_A          180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK  259 (326)
T ss_dssp             SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC
T ss_pred             cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch
Confidence            998765322    23349999999999998899999999999999999999999996321      0000000   0000


Q ss_pred             ------CCCc---cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 ------EPKF---QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 ------~~~~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                            ....   .....++.+.+++.+||+.||.+|||+.+|+++|+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             CSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence                  0000   012245789999999999999999999999999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.3e-38  Score=307.58  Aligned_cols=229  Identities=17%  Similarity=0.221  Sum_probs=173.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|.++  |+.||+|+++....  ......+.+| .++++++||||+++++++.+++.+++||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            36899999999999999999984  88999999986431  2233567788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhc------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          209 EYLPKGNLKGILSKK------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       209 E~~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ||++ |+|.+++...      ..+++..+..++.||+.                  |||++.++.+||+|||+++.....
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            9998 5999998653      35899999999999987                  999999999999999999876532


Q ss_pred             ---CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--c---------------
Q 039021          265 ---HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--N---------------  322 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~---------------  322 (464)
                         .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+... +....+..  +               
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  241 (317)
T 2pmi_A          162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK  241 (317)
T ss_dssp             CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred             cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence               233458999999999976 5689999999999999999999999987652 11111100  0               


Q ss_pred             CCC---------------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          323 FEP---------------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       323 ~~~---------------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ..+               ......+++++.+||.+||+.||++|||+.++++|.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f  297 (317)
T 2pmi_A          242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF  297 (317)
T ss_dssp             CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhh
Confidence            000               00113578899999999999999999999999998653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.1e-38  Score=317.74  Aligned_cols=229  Identities=17%  Similarity=0.176  Sum_probs=180.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc-----hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH-----PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~-----~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|.+.+.||+|+||.||+|.++  ++.||+|++......     .......+.+| .+|++++||||+++++++. .+.
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~  213 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED  213 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence            46999999999999999999985  789999999864321     12233457889 9999999999999999875 456


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC---ceeEecchhhhhhc
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD---HLKIGEYWVQMFYE  262 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~---~~kl~DFG~a~~~~  262 (464)
                      .++||||+++|+|.+++...+.+++.++..++.|++.                  |||++.++   .+||+|||+++...
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~  293 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  293 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC
T ss_pred             eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecC
Confidence            8999999999999999988889999999999999987                  99997544   59999999999876


Q ss_pred             ccC--CCCcCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc-c-chhccccccCCCCcc---CCCC
Q 039021          263 QIH--PNQENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-F-DFMHLKSVNFEPKFQ---ISRC  332 (464)
Q Consensus       263 ~~~--~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~-~~~~~~~~~~~~~~~---~~~~  332 (464)
                      ...  ....||+.|+|||++.+   ..++.++|||||||++|+|++|..||.... . ......... ...+.   ...+
T Consensus       294 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~  372 (419)
T 3i6u_A          294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEV  372 (419)
T ss_dssp             -----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTT-CCCCCHHHHTTS
T ss_pred             CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcC-CCCCCchhhccc
Confidence            432  34459999999999853   677889999999999999999999998754 2 222222211 11111   1458


Q ss_pred             cHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ++++.+||.+||+.||++|||+.++++|.+
T Consensus       373 ~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  402 (419)
T 3i6u_A          373 SEKALDLVKKLLVVDPKARFTTEEALRHPW  402 (419)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence            999999999999999999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2e-38  Score=312.23  Aligned_cols=241  Identities=17%  Similarity=0.200  Sum_probs=188.5

Q ss_pred             ccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHH--------hHHHH-HHHHhcCCCcee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVL--------SAKDN-CKLRELRHPNIL  192 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~--------~~~~e-~~l~~l~hpnIv  192 (464)
                      ....+|++.+.||+|+||.||+|.++       ++.||+|++...........+        .+..| ..++.++||||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            44558999999999999999999984       478999999864321111111        12234 567788999999


Q ss_pred             eeeceeeeC----CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhccc--CC
Q 039021          193 QFLGSIVLG----EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQD--EG  247 (464)
Q Consensus       193 ~~~~~~~~~----~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~--~~  247 (464)
                      ++++++...    ...+|||||+ +|+|.+++... +.+++..++.++.||+.                  |||++  .+
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~  190 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP  190 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence            999999875    4589999999 99999999765 68999999999999987                  99999  88


Q ss_pred             CceeEecchhhhhhcccC----------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cch
Q 039021          248 DHLKIGEYWVQMFYEQIH----------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDF  315 (464)
Q Consensus       248 ~~~kl~DFG~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~  315 (464)
                      +.+||+|||+++......          ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..  ...
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~  270 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY  270 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence            999999999997754321          22339999999999999999999999999999999999999998643  111


Q ss_pred             hccccccCC--------CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          316 MHLKSVNFE--------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       316 ~~~~~~~~~--------~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      .........        ..++...+|+++.+|+..||+.||++||++.+|++.|+.+......
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~  333 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS  333 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            111110000        1112256799999999999999999999999999999998766554

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.7e-38  Score=314.93  Aligned_cols=224  Identities=16%  Similarity=0.129  Sum_probs=177.4

Q ss_pred             ccccc-cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHH-HhcCCCceeeeeceeee----CCc
Q 039021          133 NTLHS-SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKL-RELRHPNILQFLGSIVL----GEE  203 (464)
Q Consensus       133 ~~~~~-~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l-~~l~hpnIv~~~~~~~~----~~~  203 (464)
                      +|.+. +.||+|+||+||+|.++  ++.||+|++...        ..+.+| .++ +..+||||++++++|..    ...
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            46665 68999999999999985  889999999742        235566 655 55689999999999876    567


Q ss_pred             eEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccC---CCceeEecchhhhh
Q 039021          204 MILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDE---GDHLKIGEYWVQMF  260 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl~DFG~a~~  260 (464)
                      +|||||||+||+|.+++...  ..+++.++..++.||+.                  |||++.   ++.+||+|||+++.
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            89999999999999999864  36999999999999987                  999998   78899999999987


Q ss_pred             hccc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch----hccccccCCCCcc---CCC
Q 039021          261 YEQI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF----MHLKSVNFEPKFQ---ISR  331 (464)
Q Consensus       261 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~---~~~  331 (464)
                      ....  ....+||+.|+|||++.+..|+.++|||||||++|||++|..||.......    ...........++   ...
T Consensus       214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (400)
T 1nxk_A          214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE  293 (400)
T ss_dssp             CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred             cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence            6532  234569999999999999999999999999999999999999997754111    1111111111111   145


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +++++.+||++||+.||++|||+.++++|.+..
T Consensus       294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            899999999999999999999999999998765

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.4e-38  Score=303.06  Aligned_cols=227  Identities=23%  Similarity=0.285  Sum_probs=180.2

Q ss_pred             ccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHh--cCCCceeeeeceeeeC----Cc
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE--LRHPNILQFLGSIVLG----EE  203 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~--l~hpnIv~~~~~~~~~----~~  203 (464)
                      ..+|++.+.||+|+||.||+|+++++.||+|++...      ....+..| +++..  ++||||+++++++.+.    ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            347999999999999999999999999999999753      12344455 66665  7999999999987653    45


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------------hhcccCCCceeEecchh
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------------Nill~~~~~~kl~DFG~  257 (464)
                      +++||||+++|+|.++++. ..+++..++.++.|++.                          |||++.++.+||+|||+
T Consensus        81 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             eEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            8999999999999999965 47999999999999974                          99999999999999999


Q ss_pred             hhhhcccC-------CCCcCCCCcccccccccC------CCCCcccchhHHHHHHHHHhC----------CCCCCCCcc-
Q 039021          258 QMFYEQIH-------PNQENSQRNDNSSIASNV------LDDTKKDICSFGYIFYQMLEG----------KHLQTNNSF-  313 (464)
Q Consensus       258 a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~el~~g----------~~p~~~~~~-  313 (464)
                      ++......       ....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||..... 
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            97655322       223699999999999876      455789999999999999999          888865431 


Q ss_pred             ----chhcc-c-cccCCCCccC----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          314 ----DFMHL-K-SVNFEPKFQI----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       314 ----~~~~~-~-~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                          ..... . .....+..+.    ..+++++.+||.+||+.||++|||+.++++.|+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                11111 1 1111222221    33568899999999999999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.1e-38  Score=301.99  Aligned_cols=236  Identities=23%  Similarity=0.317  Sum_probs=185.0

Q ss_pred             ccccccccccccccceeeeeEEeEEe---C--ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR---G--TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      +...+|++.+.||+|+||.||+|+++   +  ..||+|+++..........+.+.+| +++++++||||+++++++.+..
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP   94 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC
Confidence            34557999999999999999999974   2  3689999986544444566788899 9999999999999999998755


Q ss_pred             ceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                       .++||||+++|+|.+++... +.+++..+..++.|+++                  |||++.++.+||+|||+++....
T Consensus        95 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             -CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             -ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence             89999999999999999764 67999999999999986                  99999999999999999987653


Q ss_pred             cC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCcc-chhccccccCCCCccCCCCcHH
Q 039021          264 IH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       264 ~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                      ..      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||..... +..............+..+|++
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD  253 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHH
Confidence            22      22347889999999998889999999999999999999 9999988762 2222222221111223568999


Q ss_pred             HHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      +.+++.+||..||++|||+.+++++|+...
T Consensus       254 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          254 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            999999999999999999999999998763

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=4.1e-39  Score=318.69  Aligned_cols=224  Identities=11%  Similarity=0.041  Sum_probs=178.9

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHh---cCCCceeeee-------ce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE---LRHPNILQFL-------GS  197 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~---l~hpnIv~~~-------~~  197 (464)
                      ..+|.+.+.||+|+||.||+|++.  |+.||+|++...........+.+.+| .+++.   ++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            457999999999999999999974  89999999986543444455677777 65554   4799999999       55


Q ss_pred             eeeCC-----------------ceEEEEEecCCCChHHHHhhccCCCH-------HHHHHHHHHHHh-------------
Q 039021          198 IVLGE-----------------EMILITEYLPKGNLKGILSKKVRLDL-------PTALRYALDIAR-------------  240 (464)
Q Consensus       198 ~~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~~l~~-------~~~~~~~~qi~~-------------  240 (464)
                      +.+.+                 ..||||||+ +|+|.+++...+.+++       ..++.++.||++             
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            55443                 389999999 5799999987655655       788889999987             


Q ss_pred             -----hhcccCCCceeEecchhhhhhcccCCCCcCCCCcccccccccC-----------CCCCcccchhHHHHHHHHHhC
Q 039021          241 -----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV-----------LDDTKKDICSFGYIFYQMLEG  304 (464)
Q Consensus       241 -----Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv~l~el~~g  304 (464)
                           |||++.++.+||+|||+|+..........| +.|+|||++.+.           .++.++|||||||++|||++|
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg  309 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA  309 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence                 999999999999999999976655556668 999999999887           899999999999999999999


Q ss_pred             CCCCCCCccc-hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          305 KHLQTNNSFD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       305 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +.||...... .......      ....+|+++.+||.+||+.||++|||+.++++|.+
T Consensus       310 ~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  362 (377)
T 3byv_A          310 DLPITKDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE  362 (377)
T ss_dssp             SCCC------CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred             CCCCcccccccchhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence            9999876522 2222111      11457999999999999999999999999999754

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2e-38  Score=307.52  Aligned_cols=234  Identities=21%  Similarity=0.342  Sum_probs=193.2

Q ss_pred             ccccccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee--
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV--  199 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~--  199 (464)
                      +...+|++.+.||+|+||.||+|++      .++.||+|++...   .....+.+.+| +++++++||||+++++++.  
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP   96 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence            3445799999999999999999995      3789999999864   24455678899 9999999999999999887  


Q ss_pred             eCCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          200 LGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       200 ~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      +...+++||||+++|+|.+++.. ...+++..++.++.|++.                  |||++.++.+||+|||+++.
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence            45668999999999999999976 467999999999999986                  99999999999999999987


Q ss_pred             hcccC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch----------------hcc
Q 039021          261 YEQIH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF----------------MHL  318 (464)
Q Consensus       261 ~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~----------------~~~  318 (464)
                      .....      ....||+.|+|||++.+..++.++||||||+++|+|++|..||.......                ...
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL  256 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred             cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            65322      23348888999999999999999999999999999999999987544211                111


Q ss_pred             ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ......... +..+++++.+||.+||+.||++|||+.+++++|+.+..
T Consensus       257 ~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          257 LEEGQRLPA-PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             hhcccCCCC-CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            112222222 35689999999999999999999999999999988754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-38  Score=306.87  Aligned_cols=233  Identities=17%  Similarity=0.271  Sum_probs=186.3

Q ss_pred             cccccccccccccceeeeeEEeEEe--Cce----EEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTW----VVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~----vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ...+|++.+.||+|+||.||+|++.  ++.    ||+|.+....  .......+.+| .++++++||||+++++++..+.
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence            3457999999999999999999984  554    4666665432  22334578889 9999999999999999998754


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                       .++||||+.+|+|.+++.. .+.+++..++.++.|++.                  |||++.++.+||+|||+++....
T Consensus        91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred             -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence             8899999999999999976 467999999999999987                  99999999999999999987653


Q ss_pred             cC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchh-ccccccCCCCccCCCCcHHH
Q 039021          264 IH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFM-HLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       264 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ..     ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+...... ........... +..+++++
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l  248 (327)
T 3lzb_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-PPICTIDV  248 (327)
T ss_dssp             ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-CTTBCHHH
T ss_pred             ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHH
Confidence            22     22337889999999999999999999999999999999 9999988763333 32323323332 35689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+||.+||+.||.+|||+.++++.|+.+..
T Consensus       249 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          249 YMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999998853

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=3.5e-38  Score=309.95  Aligned_cols=229  Identities=18%  Similarity=0.264  Sum_probs=187.7

Q ss_pred             ccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-----CCceeeeeceeee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-----HPNILQFLGSIVL  200 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-----hpnIv~~~~~~~~  200 (464)
                      ....+|.+.+.||+|+||.||+|++  .++.||+|+++..    ......+..| .+++.++     ||||+++++++..
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~  107 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY  107 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence            3345799999999999999999999  4889999999752    3445566778 8999986     9999999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccC--------------
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDE--------------  246 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~--------------  246 (464)
                      .+..++||||+ +++|.+++...  ..+++.+++.++.||+.                  |||++.              
T Consensus       108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~  186 (360)
T 3llt_A          108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT  186 (360)
T ss_dssp             TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred             CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence            99999999999 88999999765  35999999999999987                  999975              


Q ss_pred             -----------CCceeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cc
Q 039021          247 -----------GDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FD  314 (464)
Q Consensus       247 -----------~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~  314 (464)
                                 ++.+||+|||+|+..........||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .+
T Consensus       187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  266 (360)
T 3llt_A          187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME  266 (360)
T ss_dssp             TCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHH
Confidence                       788999999999987766667779999999999999999999999999999999999999998755 11


Q ss_pred             hhcccccc--C-----------------------CCCccC-------------------CCCcHHHHHHHHHHcccCCCC
Q 039021          315 FMHLKSVN--F-----------------------EPKFQI-------------------SRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       315 ~~~~~~~~--~-----------------------~~~~~~-------------------~~~~~~~~~li~~cl~~dp~~  350 (464)
                      ....+...  .                       ...++.                   ...++.+.+||.+||+.||++
T Consensus       267 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  346 (360)
T 3llt_A          267 HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTL  346 (360)
T ss_dssp             HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhh
Confidence            11110000  0                       000000                   112377889999999999999


Q ss_pred             CCCHHHHHHHHH
Q 039021          351 RPTFAAVIITLE  362 (464)
Q Consensus       351 Rpt~~~i~~~l~  362 (464)
                      |||+.|+++|.+
T Consensus       347 Rpta~elL~hp~  358 (360)
T 3llt_A          347 RPSPAELLKHKF  358 (360)
T ss_dssp             SCCHHHHTTSGG
T ss_pred             CCCHHHHhcCcc
Confidence            999999998753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.8e-38  Score=306.85  Aligned_cols=228  Identities=20%  Similarity=0.180  Sum_probs=178.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  ++.||+|+++.... .......+.+| .++++++||||+++++++.+.+.+++|||
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  113 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE  113 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence            7999999999999999999984  88999999976432 23344567788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc-----CCCceeEecchhhhhhcccC-
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD-----EGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~-----~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      |+++ +|.+++.....+++..+..++.||+.                  |||++     ..+.+||+|||+++...... 
T Consensus       114 ~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~  192 (329)
T 3gbz_A          114 YAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR  192 (329)
T ss_dssp             CCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred             cCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence            9985 99999998889999999999999987                  99994     45569999999998876332 


Q ss_pred             --CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--cCCC--------------
Q 039021          266 --PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--NFEP--------------  325 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~~~~--------------  325 (464)
                        ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... +....+..  +.+.              
T Consensus       193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (329)
T 3gbz_A          193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK  272 (329)
T ss_dssp             -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhh
Confidence              23458999999999987 4589999999999999999999999987651 11111100  0000              


Q ss_pred             -Ccc-----------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          326 -KFQ-----------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       326 -~~~-----------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                       .++           ...+++++.+||.+||+.||++|||+.|+++|.+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  321 (329)
T 3gbz_A          273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY  321 (329)
T ss_dssp             TTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             hhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence             000           0126789999999999999999999999998864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.9e-38  Score=301.45  Aligned_cols=229  Identities=16%  Similarity=0.219  Sum_probs=187.6

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+|++.+.||+|+||.||+|.++  |+.||+|++....     ....+.+| .++++++||||+++++++.+.+..++
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI  101 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            3446999999999999999999985  8899999998642     23467788 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||||+++|+|.+++. ....+++..+..++.|++.                  ||+++.++.+||+|||++.......  
T Consensus       102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred             EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence            999999999999997 3568999999999999987                  9999999999999999998765432  


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  342 (464)
                       ....||+.|+|||++.+..++.++||||||+++|+|++|..||.... ............+.+. +..+++.+.+||.+
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  261 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ  261 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence             23459999999999999999999999999999999999999998766 2222222222222221 24578999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||..||.+|||+.++++|.+.
T Consensus       262 ~l~~dp~~Rpt~~~ll~~~~~  282 (314)
T 3com_A          262 CLVKSPEQRATATQLLQHPFV  282 (314)
T ss_dssp             HTCSCTTTSCCHHHHTTSHHH
T ss_pred             HccCChhhCcCHHHHHhCHHH
Confidence            999999999999999998664

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.6e-38  Score=304.08  Aligned_cols=228  Identities=16%  Similarity=0.122  Sum_probs=182.0

Q ss_pred             cccccc-cccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          132 LNTLHS-SMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       132 ~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ..|.+. +.||+|+||.||+|++  .++.||+|++.....   .....+.+| ++++++ +||||+++++++.+.+.+++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l   88 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL   88 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            357774 7899999999999997  488999999986432   224567778 888885 79999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCc---eeEecchhhhhhccc-
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDH---LKIGEYWVQMFYEQI-  264 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~---~kl~DFG~a~~~~~~-  264 (464)
                      ||||+++|+|.+++...+.+++.++..++.||+.                  |||++.++.   +||+|||+++..... 
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             EEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence            9999999999999988889999999999999987                  999988775   999999998765421 


Q ss_pred             ---------CCCCcCCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCccch---------------
Q 039021          265 ---------HPNQENSQRNDNSSIASN-----VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF---------------  315 (464)
Q Consensus       265 ---------~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~---------------  315 (464)
                               .....||+.|+|||++.+     ..++.++|||||||++|+|++|+.||.......               
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  248 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM  248 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence                     112349999999999875     568899999999999999999999998754110               


Q ss_pred             hccccccCCCCccC---CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          316 MHLKSVNFEPKFQI---SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       316 ~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ...........++.   ..+++++.+||.+||+.||++|||+.++++|.+
T Consensus       249 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  298 (316)
T 2ac3_A          249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW  298 (316)
T ss_dssp             HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred             HHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence            11111111222221   457899999999999999999999999999854

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5e-38  Score=303.28  Aligned_cols=233  Identities=19%  Similarity=0.187  Sum_probs=186.7

Q ss_pred             cccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee----
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL----  200 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~----  200 (464)
                      .+...+|++.+.||+|+||.||+|++  .++.||+|++...   .....+.+.+| .++++++||||+++++++..    
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA  101 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence            34455799999999999999999998  4899999998753   24556678889 99999999999999999973    


Q ss_pred             CCceEEEEEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          201 GEEMILITEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ....++||||+++|+|.+++..    ...+++.+++.++.|++.                  |||++.++.+||+|||++
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            3478999999999999999975    467999999999999987                  999999999999999988


Q ss_pred             hhhcccC------------CCCcCCCCcccccccccCC---CCCcccchhHHHHHHHHHhCCCCCCCCc---cchhcccc
Q 039021          259 MFYEQIH------------PNQENSQRNDNSSIASNVL---DDTKKDICSFGYIFYQMLEGKHLQTNNS---FDFMHLKS  320 (464)
Q Consensus       259 ~~~~~~~------------~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~el~~g~~p~~~~~---~~~~~~~~  320 (464)
                      +......            ....||+.|+|||++.+..   ++.++||||||+++|+|++|+.||....   ........
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  261 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ  261 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence            7653211            1123799999999987544   6899999999999999999999996532   11111111


Q ss_pred             ccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .....+ ....+++++.+||.+||+.||.+|||+.+++++|+.+
T Consensus       262 ~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          262 NQLSIP-QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             CC--CC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             ccCCCC-ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            111111 2256899999999999999999999999999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=9.8e-38  Score=299.82  Aligned_cols=231  Identities=19%  Similarity=0.234  Sum_probs=187.9

Q ss_pred             cccccccccceeeeeEEeEEeCceEEEEEeeccC-CchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          134 TLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHI-YHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      |..++.||+|+||.||+|.++++.||+|++.... .......+.+.+| .++++++||||+++++++.+.+..++||||+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  112 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM  112 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence            4456899999999999999999999999997543 2234456678889 9999999999999999999999999999999


Q ss_pred             CCCChHHHHhh---ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----C
Q 039021          212 PKGNLKGILSK---KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----H  265 (464)
Q Consensus       212 ~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----~  265 (464)
                      ++|+|.+++..   ...+++..++.++.|++.                  |||++.++.+||+|||+++.....     .
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  192 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT  192 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence            99999999964   356999999999999986                  999999999999999999876532     2


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc---ccC----------CCCccCCC
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS---VNF----------EPKFQISR  331 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~---~~~----------~~~~~~~~  331 (464)
                      ....||+.|+|||++.+ .++.++||||||+++|+|++|..||..... .......   ...          ........
T Consensus       193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (307)
T 2nru_A          193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST  271 (307)
T ss_dssp             SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHH
T ss_pred             cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchH
Confidence            23459999999998865 588999999999999999999999987552 1111100   000          00111133


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      .++.+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus       272 ~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          272 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            5678999999999999999999999999998874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.2e-38  Score=309.68  Aligned_cols=235  Identities=15%  Similarity=0.115  Sum_probs=182.2

Q ss_pred             ccccccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCchHHH--------HHhHHHH-HHHHhcCCCceeee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYHPVKM--------VLSAKDN-CKLRELRHPNILQF  194 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~--------~~~~~~e-~~l~~l~hpnIv~~  194 (464)
                      ....+|.+.+.||+|+||.||+|.+     .+..||+|++..........        ...+.+| ..++.++||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            3445799999999999999999998     46789999998653211111        1224566 78899999999999


Q ss_pred             eceeee----CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC--ce
Q 039021          195 LGSIVL----GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD--HL  250 (464)
Q Consensus       195 ~~~~~~----~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~--~~  250 (464)
                      ++++.+    ....++||||+ +++|.+++...+.+++.+++.++.||+.                  |||++.++  .+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSE
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcE
Confidence            999988    67899999999 9999999988789999999999999987                  99999887  99


Q ss_pred             eEecchhhhhhcccC----------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhcc
Q 039021          251 KIGEYWVQMFYEQIH----------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHL  318 (464)
Q Consensus       251 kl~DFG~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~  318 (464)
                      ||+|||+++......          ....||+.|+|||++.+..++.++|||||||++|||++|+.||....  ......
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  272 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT  272 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence            999999998764221          23359999999999999999999999999999999999999996532  111111


Q ss_pred             ccccCCCCcc--------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          319 KSVNFEPKFQ--------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       319 ~~~~~~~~~~--------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .........+        ...+|+++.++|.+||..||++|||+.+|++.|+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            1111111111        126899999999999999999999999999998764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=3.8e-38  Score=311.10  Aligned_cols=232  Identities=11%  Similarity=-0.019  Sum_probs=175.4

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc--CCCceeeee-------cee
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL--RHPNILQFL-------GSI  198 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l--~hpnIv~~~-------~~~  198 (464)
                      ...|.+.+.||+|+||.||+|++.  ++.||+|++...........+.+.+| .+++.|  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            345899999999999999999984  88999999998665555666777887 666666  599988865       444


Q ss_pred             eeC-----------------CceEEEEEecCCCChHHHHhhc-cCCCHHHH------HHHHHHHHh--------------
Q 039021          199 VLG-----------------EEMILITEYLPKGNLKGILSKK-VRLDLPTA------LRYALDIAR--------------  240 (464)
Q Consensus       199 ~~~-----------------~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~------~~~~~qi~~--------------  240 (464)
                      ...                 ..+||||||++ |+|.+++... ..+++..+      ..++.||++              
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD  219 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH  219 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence            433                 33899999999 7999999763 44555555      677788876              


Q ss_pred             ----hhcccCCCceeEecchhhhhhcccCCCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCccc
Q 039021          241 ----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD  314 (464)
Q Consensus       241 ----Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~  314 (464)
                          |||++.++.+||+|||+|+..........+|+.|+|||++.+  ..++.++|||||||++|||++|+.||......
T Consensus       220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~  299 (371)
T 3q60_A          220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG  299 (371)
T ss_dssp             CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred             CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence                999999999999999999987655445557799999999987  78999999999999999999999999877421


Q ss_pred             hhcc-------ccccCCCCcc-CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          315 FMHL-------KSVNFEPKFQ-ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       315 ~~~~-------~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ....       ........++ ...+|+++.+||.+||+.||++|||+.++++|.+.
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  356 (371)
T 3q60_A          300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF  356 (371)
T ss_dssp             CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHH
T ss_pred             cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHH
Confidence            1110       0111111222 14689999999999999999999999999998654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.2e-38  Score=307.41  Aligned_cols=226  Identities=16%  Similarity=0.166  Sum_probs=180.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||+|+++  |+.||+|+++...  .....+.+.+| .+|++++||||+++++++.+.+      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            36899999999999999999984  8899999998643  23445678899 9999999999999999987643      


Q ss_pred             ---------------------------------------------------ceEEEEEecCCCChHHHHhhcc---CCCH
Q 039021          203 ---------------------------------------------------EMILITEYLPKGNLKGILSKKV---RLDL  228 (464)
Q Consensus       203 ---------------------------------------------------~~~lv~E~~~~g~L~~~l~~~~---~l~~  228 (464)
                                                                         ..++|||||++|+|.+++....   ..++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                               2899999999999999998653   3556


Q ss_pred             HHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---------------CCCcCCCCcc
Q 039021          229 PTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---------------PNQENSQRND  275 (464)
Q Consensus       229 ~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---------------~~~~gt~~y~  275 (464)
                      ..++.++.||+.                  |||++.++.+||+|||+++......               ....||+.|+
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  243 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM  243 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence            678899999986                  9999999999999999998765321               2335999999


Q ss_pred             cccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHH
Q 039021          276 NSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFA  355 (464)
Q Consensus       276 aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~  355 (464)
                      |||++.+..++.++|||||||++|||++|..|+..... ........ ..+......++++.+||.+||+.||++|||+.
T Consensus       244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  321 (332)
T 3qd2_B          244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-IITDVRNL-KFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT  321 (332)
T ss_dssp             CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-HHHHHHTT-CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHH
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-HHHHhhcc-CCCcccccCChhHHHHHHHHccCCCCcCCCHH
Confidence            99999999999999999999999999998777643221 11111111 11111234578889999999999999999999


Q ss_pred             HHHHHH
Q 039021          356 AVIITL  361 (464)
Q Consensus       356 ~i~~~l  361 (464)
                      ++++|.
T Consensus       322 ~~l~~~  327 (332)
T 3qd2_B          322 DIIENA  327 (332)
T ss_dssp             HHHHST
T ss_pred             HHhhch
Confidence            999874

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=9.4e-38  Score=299.16  Aligned_cols=227  Identities=16%  Similarity=0.203  Sum_probs=184.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|++.  +..||+|++....   ......+.+| .++++++||||+++++++.+.+..++||
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            46999999999999999999995  8899999997532   2334577888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCC
Q 039021          209 EYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHP  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~  266 (464)
                      ||+++|+|.+++.. ...+++..+..++.|++.                  |||++.++.+||+|||++.....   ...
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  175 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD  175 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence            99999999999875 467999999999999986                  99999999999999999875432   223


Q ss_pred             CCcCCCCccccccc-----ccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCC-ccCCCCcHHHHHH
Q 039021          267 NQENSQRNDNSSIA-----SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPK-FQISRCPNRLKQL  339 (464)
Q Consensus       267 ~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l  339 (464)
                      ...||+.|+|||++     .+..++.++||||||+++|+|++|..||..... ...........+. ..+..+++++.+|
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  255 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF  255 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHH
Confidence            44699999999998     367788999999999999999999999988762 2222222222222 2235689999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      |.+||+.||++|||+.++++|.
T Consensus       256 i~~~l~~dp~~Rps~~~ll~h~  277 (302)
T 2j7t_A          256 LKIALDKNPETRPSAAQLLEHP  277 (302)
T ss_dssp             HHHHSCSCTTTSCCHHHHTTST
T ss_pred             HHHHcccChhhCCCHHHHhcCh
Confidence            9999999999999999998874

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.9e-38  Score=306.10  Aligned_cols=230  Identities=17%  Similarity=0.198  Sum_probs=186.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||.||+|++.  |+.||+|++..... .....+.+.+| .++++++||||+++++++.+.+..++|||
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            7999999999999999999985  88999999976532 23445667788 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~  268 (464)
                      |+++++|.+++...+.+++..+..++.|++.                  |||++.++.+||+|||+++.....   ....
T Consensus       105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  184 (331)
T 4aaa_A          105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE  184 (331)
T ss_dssp             CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------C
T ss_pred             cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCC
Confidence            9999999998887788999999999999986                  999999999999999999876532   2334


Q ss_pred             cCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------------ccC-CC
Q 039021          269 ENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------------VNF-EP  325 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------------~~~-~~  325 (464)
                      .||+.|+|||++.+. .++.++|||||||++|+|++|+.||..... +......                    .+. .+
T Consensus       185 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (331)
T 4aaa_A          185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLP  264 (331)
T ss_dssp             CCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCC
T ss_pred             cCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCc
Confidence            599999999999775 789999999999999999999999987651 1111100                    000 00


Q ss_pred             Cc--------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          326 KF--------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       326 ~~--------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ..        ..+.+++++.+||.+||+.||++|||+.|+++|.+.
T Consensus       265 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f  310 (331)
T 4aaa_A          265 EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF  310 (331)
T ss_dssp             CCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             cccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence            00        013578999999999999999999999999998664

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=301.58  Aligned_cols=239  Identities=21%  Similarity=0.240  Sum_probs=177.9

Q ss_pred             CccccccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIV  199 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~  199 (464)
                      ...+++.+.+|++.+.||+|+||.||+|++  .++.||+|++...   .......+.+| .+++++. ||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           20 GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             TCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence            345666677899999999999999999998  4889999998653   24445677888 9999996 999999999984


Q ss_pred             --------eCCceEEEEEecCCCChHHHHhh---ccCCCHHHHHHHHHHHHh--------------------hhcccCCC
Q 039021          200 --------LGEEMILITEYLPKGNLKGILSK---KVRLDLPTALRYALDIAR--------------------NLLQDEGD  248 (464)
Q Consensus       200 --------~~~~~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~--------------------Nill~~~~  248 (464)
                              ....+++||||+. |+|.+++..   .+.+++.+++.++.||+.                    |||++.++
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~  175 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG  175 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS
T ss_pred             ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC
Confidence                    3345899999996 699998864   467999999999999986                    99999999


Q ss_pred             ceeEecchhhhhhcccCC---------------CCcCCCCccccccc---ccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 039021          249 HLKIGEYWVQMFYEQIHP---------------NQENSQRNDNSSIA---SNVLDDTKKDICSFGYIFYQMLEGKHLQTN  310 (464)
Q Consensus       249 ~~kl~DFG~a~~~~~~~~---------------~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~el~~g~~p~~~  310 (464)
                      .+||+|||+++.......               ...||+.|+|||++   .+..++.++|||||||++|+|++|+.||..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            999999999987653221               33489999999998   567788999999999999999999999987


Q ss_pred             CccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      ..........   .........++.+.+||.+||+.||++|||+.+++++|+.+.....
T Consensus       256 ~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          256 GAKLRIVNGK---YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             -------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             hhHHHhhcCc---ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence            5522111111   1111224567889999999999999999999999999999876543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=302.34  Aligned_cols=232  Identities=17%  Similarity=0.235  Sum_probs=185.8

Q ss_pred             cccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeee---
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVL---  200 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~---  200 (464)
                      .....+|++.+.||+|+||.||+|++  .++.||+|++.....    ....+.+| .+++++ +||||+++++++..   
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   95 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP   95 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence            33445799999999999999999999  488999999976432    23467788 899998 89999999999987   


Q ss_pred             ---CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          201 ---GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       201 ---~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                         .+.+++||||+++|+|.+++...  ..+++..++.++.||+.                  |||++.++.+||+|||+
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  175 (326)
T 2x7f_A           96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV  175 (326)
T ss_dssp             -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred             ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence               46789999999999999999763  57999999999999987                  99999999999999999


Q ss_pred             hhhhccc---CCCCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc
Q 039021          258 QMFYEQI---HPNQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ  328 (464)
Q Consensus       258 a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~  328 (464)
                      +......   .....||+.|+|||++.     +..++.++|||||||++|+|++|..||.... ............+...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  255 (326)
T 2x7f_A          176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK  255 (326)
T ss_dssp             TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS
T ss_pred             ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCC
Confidence            9876532   22345999999999987     5678899999999999999999999998766 2222222222233334


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ...+++.+.+||.+||..||.+|||+.++++|.+.
T Consensus       256 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~  290 (326)
T 2x7f_A          256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI  290 (326)
T ss_dssp             CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHH
T ss_pred             ccccCHHHHHHHHHHhccChhhCCCHHHHhhChHH
Confidence            46689999999999999999999999999998653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=9.5e-38  Score=299.11  Aligned_cols=231  Identities=23%  Similarity=0.335  Sum_probs=188.2

Q ss_pred             cccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC--C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG--E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~--~  202 (464)
                      ..|++.+.||+|+||.||+|++      .++.||+|++....  .....+.+.+| .++++++||||+++++++.+.  .
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN   98 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence            3589999999999999999995      48899999998642  22334678889 999999999999999999876  6


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      .+++||||+++|+|.+++.. ...+++..++.++.|++.                  |||++.++.+||+|||+++....
T Consensus        99 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  178 (302)
T 4e5w_A           99 GIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  178 (302)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             eEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence            68999999999999999954 467999999999999987                  99999999999999999987653


Q ss_pred             cC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc----------------cchhccccc
Q 039021          264 IH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS----------------FDFMHLKSV  321 (464)
Q Consensus       264 ~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~----------------~~~~~~~~~  321 (464)
                      ..      ....||..|+|||++.+..++.++||||||+++|+|++|..|+....                .........
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (302)
T 4e5w_A          179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE  258 (302)
T ss_dssp             TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred             CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence            22      23448889999999999999999999999999999999998864321                111111122


Q ss_pred             cCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       322 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ...... +..+|+++.+||.+||+.||.+|||+.++++.|+.+.
T Consensus       259 ~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          259 GKRLPC-PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             TCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCC-CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            222222 2568999999999999999999999999999998763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-38  Score=312.23  Aligned_cols=231  Identities=19%  Similarity=0.210  Sum_probs=188.4

Q ss_pred             cccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCc-hHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYH-PVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~  203 (464)
                      .+|++.+.||+|+||.||+|++     .++.||+|+++..... .......+.+| ++|+++ +||||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            4799999999999999999998     4889999999753211 12233456778 999999 69999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-  264 (464)
                      ++|||||+++|+|.+++...+.+++..+..++.||++                  |||++.++.+||+|||+++..... 
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~  213 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE  213 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCC
Confidence            9999999999999999988889999999999999987                  999999999999999999865322 


Q ss_pred             ---CCCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhccccccCCCCccCCCCcHH
Q 039021          265 ---HPNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKSVNFEPKFQISRCPNR  335 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  335 (464)
                         .....||+.|+|||++.+  ..++.++|||||||++|||++|+.||.....    ..+........+.++ ..+++.
T Consensus       214 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  292 (355)
T 1vzo_A          214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP-QEMSAL  292 (355)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC-TTSCHH
T ss_pred             CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCC-cccCHH
Confidence               223459999999999985  4578999999999999999999999975431    111111122233333 568999


Q ss_pred             HHHHHHHHcccCCCCCC-----CHHHHHHHHHH
Q 039021          336 LKQLIAQCTNKDPSKRP-----TFAAVIITLEE  363 (464)
Q Consensus       336 ~~~li~~cl~~dp~~Rp-----t~~~i~~~l~~  363 (464)
                      +.+||.+||..||.+||     |+.++++|.+.
T Consensus       293 ~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             HHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             HHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence            99999999999999999     99999998753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-37  Score=305.90  Aligned_cols=228  Identities=17%  Similarity=0.175  Sum_probs=183.4

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||+|.+.  |+.||+|++..... .......+.+| .+|+.++||||+++++++...+      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46999999999999999999984  88999999975432 24455678889 9999999999999999998653      


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+|+||||+ +++|.++++. +.+++..+..++.||++                  |||++.++.+||+|||+++.....
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  181 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE  181 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc
Confidence            469999999 7899999976 57999999999999987                  999999999999999999987766


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--c------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--N------------------  322 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~------------------  322 (464)
                      .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+ .+....+..  +                  
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~  261 (367)
T 1cm8_A          182 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY  261 (367)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred             cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Confidence            566679999999999887 789999999999999999999999998765 111111100  0                  


Q ss_pred             -------CCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 -------FEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 -------~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                             ....+  ....+++++.+||.+||..||++|||+.++++|.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~  310 (367)
T 1cm8_A          262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  310 (367)
T ss_dssp             HHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence                   00011  11457899999999999999999999999999854

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.8e-38  Score=311.63  Aligned_cols=227  Identities=16%  Similarity=0.206  Sum_probs=174.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCC--ceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGE--EMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~--~~~l  206 (464)
                      +|++.+.||+|+||.||+|.++  |+.||+|++...... ......+.+| .+|+.+. ||||+++++++...+  .+|+
T Consensus        10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A           10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            6999999999999999999984  889999999754333 3344566677 9999997 999999999998644  6899


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc-----
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ-----  263 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~-----  263 (464)
                      |||||+ |+|.++++. +.+++..+..++.|+++                  |||++.++.+||+|||+|+....     
T Consensus        89 v~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  166 (388)
T 3oz6_A           89 VFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT  166 (388)
T ss_dssp             EEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred             EecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence            999998 599999976 48999999999999987                  99999999999999999986532     


Q ss_pred             -------------------cCCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc-
Q 039021          264 -------------------IHPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV-  321 (464)
Q Consensus       264 -------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~-  321 (464)
                                         ......||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+ ......+.. 
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~  246 (388)
T 3oz6_A          167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV  246 (388)
T ss_dssp             CCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence                               1123359999999999986 678999999999999999999999998766 221111110 


Q ss_pred             -cCCC--------------------------------C-----------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHH
Q 039021          322 -NFEP--------------------------------K-----------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAV  357 (464)
Q Consensus       322 -~~~~--------------------------------~-----------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i  357 (464)
                       +.+.                                .           .+...+++++.+||.+||+.||++|||+.|+
T Consensus       247 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~  326 (388)
T 3oz6_A          247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDA  326 (388)
T ss_dssp             HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHH
Confidence             0000                                0           0112578999999999999999999999999


Q ss_pred             HHHHH
Q 039021          358 IITLE  362 (464)
Q Consensus       358 ~~~l~  362 (464)
                      ++|.+
T Consensus       327 l~Hp~  331 (388)
T 3oz6_A          327 LKHPF  331 (388)
T ss_dssp             TTSTT
T ss_pred             hCCHH
Confidence            99854

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.3e-37  Score=297.49  Aligned_cols=230  Identities=17%  Similarity=0.174  Sum_probs=190.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCC---c---hHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIY---H---PVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLG  201 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~---~---~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~  201 (464)
                      .+|++.+.||+|+||.||+|.++  ++.||+|++.....   .   .....+.+.+| ++++++. ||||+++++++.+.
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   96 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence            47999999999999999999984  78999999976431   1   12344567788 9999995 99999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          202 EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      +..++||||+++|+|.+++..+..+++..+..++.|++.                  ||+++.++.+||+|||++.....
T Consensus        97 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  176 (298)
T 1phk_A           97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  176 (298)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence            999999999999999999998889999999999999986                  99999999999999999987653


Q ss_pred             cC--CCCcCCCCcccccccc------cCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccccccCCCCcc---CCC
Q 039021          264 IH--PNQENSQRNDNSSIAS------NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLKSVNFEPKFQ---ISR  331 (464)
Q Consensus       264 ~~--~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~  331 (464)
                      ..  ....||+.|+|||++.      ...++.++||||||+++|+|++|..||....... ....... ...++   ...
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~  255 (298)
T 1phk_A          177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG-NYQFGSPEWDD  255 (298)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCTTTGGG
T ss_pred             CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC-CcccCcccccc
Confidence            32  3345999999999885      4568899999999999999999999998766222 2222111 11111   145


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +++++.+||.+||+.||++|||+.++++|.+
T Consensus       256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~  286 (298)
T 1phk_A          256 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPF  286 (298)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence            7999999999999999999999999998754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-37  Score=301.43  Aligned_cols=229  Identities=22%  Similarity=0.338  Sum_probs=181.8

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc--CCCceeeeeceeeeC----Cce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL--RHPNILQFLGSIVLG----EEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l--~hpnIv~~~~~~~~~----~~~  204 (464)
                      .+|++.+.||+|+||.||+|+++++.||+|++...     . ...+..| +++..+  +||||+++++++...    ..+
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT-----E-EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG-----G-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cceEEEeEeecCCCeEEEEEEECCceEEEEEEecc-----c-cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            47999999999999999999999999999999753     1 1233344 555544  999999999999887    679


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------------hhcccCCCceeEecchhh
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ++||||+++|+|.++++.. .+++..++.++.|++.                          |||++.++.+||+|||++
T Consensus       111 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            9999999999999999764 7999999999999975                          999999999999999999


Q ss_pred             hhhcccC-------CCCcCCCCcccccccccCCCCCc------ccchhHHHHHHHHHhC----------CCCCCCCcc--
Q 039021          259 MFYEQIH-------PNQENSQRNDNSSIASNVLDDTK------KDICSFGYIFYQMLEG----------KHLQTNNSF--  313 (464)
Q Consensus       259 ~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGv~l~el~~g----------~~p~~~~~~--  313 (464)
                      +......       ....||+.|+|||++.+..++.+      +|||||||++|||++|          ..||.....  
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence            7654322       13459999999999988777665      9999999999999999          667755321  


Q ss_pred             ---chhcc-c-cccCCCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          314 ---DFMHL-K-SVNFEPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       314 ---~~~~~-~-~~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                         ..... . .....+.++    ...+++++.+||.+||+.||++|||+.+++++|+.+.+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence               11111 1 111122222    235678899999999999999999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=6.3e-38  Score=301.40  Aligned_cols=231  Identities=18%  Similarity=0.198  Sum_probs=180.8

Q ss_pred             ccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCch--HHHHHhHHHH-HHHHhc---CCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHP--VKMVLSAKDN-CKLREL---RHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~--~~~~~~~~~e-~~l~~l---~hpnIv~~~~~~~~~~  202 (464)
                      ..+|++.+.||+|+||+||+|++  .++.||+|++.......  ......+.+| .+++++   +||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            34799999999999999999997  48899999997533211  1111234455 555554   6999999999998765


Q ss_pred             -----ceEEEEEecCCCChHHHHhhccC--CCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          203 -----EMILITEYLPKGNLKGILSKKVR--LDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       203 -----~~~lv~E~~~~g~L~~~l~~~~~--l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                           .+++||||+. |+|.+++.....  +++.++..++.|++.                  |||++.++.+||+|||+
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence                 4899999997 599999987543  999999999999987                  99999999999999999


Q ss_pred             hhhhcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--cCC--CCc---
Q 039021          258 QMFYEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--NFE--PKF---  327 (464)
Q Consensus       258 a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~~~--~~~---  327 (464)
                      ++......  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+... +....+..  +..  ..+   
T Consensus       167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (308)
T 3g33_A          167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD  246 (308)
T ss_dssp             TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred             ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence            98765332  234599999999999999999999999999999999999999987662 11111100  000  000   


Q ss_pred             ------------------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 ------------------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 ------------------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                        ..+.+++++.+||.+||+.||++|||+.++++|.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~  299 (308)
T 3g33_A          247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY  299 (308)
T ss_dssp             CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred             hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence                              01357899999999999999999999999999854

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.9e-37  Score=314.74  Aligned_cols=230  Identities=13%  Similarity=0.104  Sum_probs=172.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~  203 (464)
                      .+|++.+.||+|+||+||+|+++  ++.||+|++.... ......+.+.+| .+|++++|||||++++++...     ..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            47999999999999999999984  8899999997643 234455678889 999999999999999999543     56


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-  264 (464)
                      +|+||||+. |+|.++++....+++..+..++.||++                  |||++.++.+||+|||+|+..... 
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  210 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE  210 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred             EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence            899999985 699999998888999999999999987                  999999999999999999876421 


Q ss_pred             -----------------------------CCCCcCCCCccccccc-ccCCCCCcccchhHHHHHHHHHh-----------
Q 039021          265 -----------------------------HPNQENSQRNDNSSIA-SNVLDDTKKDICSFGYIFYQMLE-----------  303 (464)
Q Consensus       265 -----------------------------~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~el~~-----------  303 (464)
                                                   .....||+.|+|||++ .+..|+.++|||||||++|||++           
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~  290 (458)
T 3rp9_A          211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD  290 (458)
T ss_dssp             TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGG
T ss_pred             ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccc
Confidence                                         1223489999999986 55779999999999999999999           


Q ss_pred             CCCCCCCCcc-c--------------------hhccc-----------------------c----ccCC--CCccCCCCc
Q 039021          304 GKHLQTNNSF-D--------------------FMHLK-----------------------S----VNFE--PKFQISRCP  333 (464)
Q Consensus       304 g~~p~~~~~~-~--------------------~~~~~-----------------------~----~~~~--~~~~~~~~~  333 (464)
                      |+.+|.+... .                    .+..+                       .    ....  .....+.++
T Consensus       291 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  370 (458)
T 3rp9_A          291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS  370 (458)
T ss_dssp             CCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSC
T ss_pred             ccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCC
Confidence            6666655320 0                    00000                       0    0000  000114468


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +++.+||.+||..||++|||+.|+++|.+.
T Consensus       371 ~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f  400 (458)
T 3rp9_A          371 ADAIHLLKRMLVFNPNKRITINECLAHPFF  400 (458)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCHhh
Confidence            999999999999999999999999999653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1e-37  Score=316.29  Aligned_cols=228  Identities=15%  Similarity=0.117  Sum_probs=178.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~  202 (464)
                      .+|++.+.||+|+||+||+|++.  ++.||+|++..... .......+.+| .+|+.++|||||++++++...      .
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46999999999999999999984  88999999986432 24455677888 999999999999999999754      3


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+||||||+++ +|.+.+..  .+++..+..++.||++                  |||++.++.+||+|||+|+.....
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  217 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  217 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred             eEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence            57999999986 57777754  5999999999999987                  999999999999999999887643


Q ss_pred             C--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--c-----------------
Q 039021          265 H--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--N-----------------  322 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~-----------------  322 (464)
                      .  ....||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+ .+....+..  +                 
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~  297 (464)
T 3ttj_A          218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY  297 (464)
T ss_dssp             CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHH
T ss_pred             cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhH
Confidence            2  34469999999999999999999999999999999999999998865 111111100  0                 


Q ss_pred             --CCCCccC--------C-----------CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          323 --FEPKFQI--------S-----------RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       323 --~~~~~~~--------~-----------~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                        ..+.+..        .           ..++++.+||.+||+.||++|||+.|+++|.+.
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~  359 (464)
T 3ttj_A          298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI  359 (464)
T ss_dssp             HTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred             hhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhh
Confidence              0000000        0           015789999999999999999999999999653

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=3.1e-37  Score=293.10  Aligned_cols=226  Identities=16%  Similarity=0.188  Sum_probs=185.6

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|.+.  ++.||+|++........ ....+.+| ..+.++ +||||+++++++.+.+..++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-HHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46999999999999999999994  89999999986543333 34456666 888888 999999999999999999999


Q ss_pred             EEecCCCChHHHHhhc----cCCCHHHHHHHHHHHHh------------------hhcccCC------------------
Q 039021          208 TEYLPKGNLKGILSKK----VRLDLPTALRYALDIAR------------------NLLQDEG------------------  247 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~------------------Nill~~~------------------  247 (464)
                      |||+++|+|.+++...    +.+++.+++.++.||+.                  |||++.+                  
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            9999999999999764    67999999999999987                  9999844                  


Q ss_pred             -CceeEecchhhhhhcccCCCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCC
Q 039021          248 -DHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEP  325 (464)
Q Consensus       248 -~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~  325 (464)
                       ..+||+|||+++...... ...||+.|+|||++.+. .++.++|||||||++|+|++|..|+.....  .........+
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~~~~~~  246 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--WHEIRQGRLP  246 (289)
T ss_dssp             CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH--HHHHHTTCCC
T ss_pred             ceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH--HHHHHcCCCC
Confidence             479999999998775432 34599999999999775 566899999999999999999987755441  1111222223


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ..+ ..+++++.+||.+||+.||++|||+.++++|.+
T Consensus       247 ~~~-~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  282 (289)
T 1x8b_A          247 RIP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHSV  282 (289)
T ss_dssp             CCS-SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred             CCC-cccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence            333 568999999999999999999999999998854

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.1e-37  Score=301.62  Aligned_cols=229  Identities=16%  Similarity=0.156  Sum_probs=182.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCc-----hHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYH-----PVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~-----~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .+|.+.+.||+|+||.||+|+++  ++.||+|++......     .......+.+| ++|++++||||+++++++...+ 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            36999999999999999999984  789999999764321     12234567889 9999999999999999987654 


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCc---eeEecchhhhhhc
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDH---LKIGEYWVQMFYE  262 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~---~kl~DFG~a~~~~  262 (464)
                      .++||||+++|+|.+++.....+++..+..++.||+.                  |||++.++.   +||+|||+++...
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence            8999999999999999988889999999999999987                  999987654   9999999998764


Q ss_pred             ccC--CCCcCCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhccccccCCCCc--cCCCCc
Q 039021          263 QIH--PNQENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLKSVNFEPKF--QISRCP  333 (464)
Q Consensus       263 ~~~--~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~~~~~~~~~--~~~~~~  333 (464)
                      ...  ....||+.|+|||++.   ...++.++|||||||++|+|++|..||.....  ..............  ....++
T Consensus       169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (322)
T 2ycf_A          169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS  248 (322)
T ss_dssp             CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSC
T ss_pred             cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcC
Confidence            321  1234999999999974   46788999999999999999999999987552  22221111111111  114579


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +++.+||.+||+.||++|||+.++++|.
T Consensus       249 ~~~~~li~~~l~~dP~~Rps~~~~l~h~  276 (322)
T 2ycf_A          249 EKALDLVKKLLVVDPKARFTTEEALRHP  276 (322)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence            9999999999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=9.7e-38  Score=299.02  Aligned_cols=233  Identities=20%  Similarity=0.250  Sum_probs=174.6

Q ss_pred             cccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      .+...+|++.+.||+|+||.||+|.+  +++.||+|++.....  ....+.+.+| .++++++||||+++++++...+..
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   88 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL   88 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence            33445799999999999999999987  488999999875421  2334567788 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhh--------ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          205 ILITEYLPKGNLKGILSK--------KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~--------~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ++||||+++|+|.+++..        .+.+++..++.++.|++.                  ||+++.++.+||+|||++
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999999963        456999999999999987                  999999999999999999


Q ss_pred             hhhccc--------CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCc-
Q 039021          259 MFYEQI--------HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKF-  327 (464)
Q Consensus       259 ~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-  327 (464)
                      +.....        .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||..... ...........+.. 
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  248 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE  248 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc
Confidence            876432        123349999999999876 5789999999999999999999999987652 22211111111111 


Q ss_pred             -------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 -------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 -------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                             ....+++++.+||.+||+.||.+|||+.++++|.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  290 (303)
T 2vwi_A          249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF  290 (303)
T ss_dssp             C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred             cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence                   11457899999999999999999999999998754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4e-37  Score=309.75  Aligned_cols=230  Identities=14%  Similarity=0.126  Sum_probs=181.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~  203 (464)
                      .+|.+.+.||+|+||.||+|+++  ++.||+|++.... ........+.+| .+|++++||||+++++++...     ..
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46999999999999999999984  7899999998643 234455678889 999999999999999999876     56


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +|+||||+. |+|.++++....+++..+..++.||++                  |||++.++.+||+|||+|+......
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~  183 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK  183 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred             EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence            899999997 599999998888999999999999987                  9999999999999999998765321


Q ss_pred             -------------------------CCCcCCCCccccccc-ccCCCCCcccchhHHHHHHHHHhCCCCCC----------
Q 039021          266 -------------------------PNQENSQRNDNSSIA-SNVLDDTKKDICSFGYIFYQMLEGKHLQT----------  309 (464)
Q Consensus       266 -------------------------~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~el~~g~~p~~----------  309 (464)
                                               ....||+.|+|||++ ....|+.++|||||||++|||++|..||.          
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f  263 (432)
T 3n9x_A          184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF  263 (432)
T ss_dssp             ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSC
T ss_pred             cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccC
Confidence                                     344599999999986 55779999999999999999998655443          


Q ss_pred             -CCcc------------------chhc-----------------------cccccCCCCc------cCCCCcHHHHHHHH
Q 039021          310 -NNSF------------------DFMH-----------------------LKSVNFEPKF------QISRCPNRLKQLIA  341 (464)
Q Consensus       310 -~~~~------------------~~~~-----------------------~~~~~~~~~~------~~~~~~~~~~~li~  341 (464)
                       +...                  ..+.                       ......+...      ..+.+++++.+||.
T Consensus       264 ~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~  343 (432)
T 3n9x_A          264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLE  343 (432)
T ss_dssp             CCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred             CCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence             2210                  0000                       0000000000      01457999999999


Q ss_pred             HHcccCCCCCCCHHHHHHHHHH
Q 039021          342 QCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       342 ~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +||+.||++|||+.|+++|.+.
T Consensus       344 ~mL~~dP~~R~ta~e~L~Hp~f  365 (432)
T 3n9x_A          344 SMLKFNPNKRITIDQALDHPYL  365 (432)
T ss_dssp             HHSCSSTTTSCCHHHHHTCGGG
T ss_pred             HHhcCCcccCCCHHHHhcChhh
Confidence            9999999999999999998653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-37  Score=300.36  Aligned_cols=236  Identities=21%  Similarity=0.372  Sum_probs=193.5

Q ss_pred             ccccccccccccccceeeeeEEeEE------eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW------RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      ....+|++.+.||+|+||.||+|++      .++.||+|++...   .....+.+.+| .++++++||||+++++++...
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            3445799999999999999999985      3889999999863   23455678889 999999999999999998764


Q ss_pred             C--ceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          202 E--EMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       202 ~--~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      +  .+++||||+++|+|.+++... ..+++.+++.++.|+++                  |||++.++.+||+|||+++.
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            4  789999999999999999765 56999999999999986                  99999999999999999987


Q ss_pred             hcccC------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-----------------hc
Q 039021          261 YEQIH------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-----------------MH  317 (464)
Q Consensus       261 ~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-----------------~~  317 (464)
                      .....      ....++..|+|||++.+..++.++||||||+++|+|++|..||.......                 ..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            65332      22347788999999998889999999999999999999999986532110                 11


Q ss_pred             cccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .......+.. +..+|+++.+||.+||+.||++|||+.++++.|+.+...+
T Consensus       275 ~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          275 LLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             HHHTTCCCCC-CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HhhcCCCCCC-CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            1112222222 3568999999999999999999999999999999887654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.2e-38  Score=305.72  Aligned_cols=229  Identities=19%  Similarity=0.233  Sum_probs=179.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|.+.+.||+|+||.||+|++.  ++.||+|++....  .......+.+| .++++++||||+++++++.+.+..++|||
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc--ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            6889999999999999999985  8899999997532  12222345568 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CC
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~  267 (464)
                      |+++ +|.+++... ..+++..+..++.|++.                  |||++.++.+||+|||+++......   ..
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~  159 (324)
T 3mtl_A           81 YLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN  159 (324)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence            9985 999998764 56999999999999986                  9999999999999999998655322   23


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--cCC-------------------
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--NFE-------------------  324 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~~~-------------------  324 (464)
                      ..||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+... +....+..  +.+                   
T Consensus       160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (324)
T 3mtl_A          160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY  239 (324)
T ss_dssp             ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC
T ss_pred             ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccc
Confidence            358999999999876 6789999999999999999999999988662 11111100  000                   


Q ss_pred             CC-------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          325 PK-------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       325 ~~-------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +.       .....+++++.+||.+||+.||++|||+.|+++|.+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  286 (324)
T 3mtl_A          240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL  286 (324)
T ss_dssp             CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred             ccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhh
Confidence            00       00134788999999999999999999999999987643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=3.6e-37  Score=324.54  Aligned_cols=235  Identities=20%  Similarity=0.326  Sum_probs=194.4

Q ss_pred             cccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG  201 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~  201 (464)
                      .+...+|++.+.||+|+||.||+|.+.     +..||+|.++..  ......+.+.+| .+|++++||||+++++++. +
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            344457999999999999999999984     457999998753  234455778889 9999999999999999985 4


Q ss_pred             CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          202 EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      +..++||||+++|+|.+++..+ ..+++..++.++.|+++                  |||++.++.+||+|||+++...
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred             CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence            6789999999999999999764 47999999999999987                  9999999999999999998765


Q ss_pred             ccCC----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHH
Q 039021          263 QIHP----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       263 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      ....    ...+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.. .+....+.....+..+ ..+|+.+
T Consensus       543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~l  621 (656)
T 2j0j_A          543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPTL  621 (656)
T ss_dssp             C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCC-TTCCHHH
T ss_pred             CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC-ccccHHH
Confidence            4321    2337789999999998999999999999999999997 999998876 3333333333333333 6689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+||.+||+.||++|||+.++++.|+.+..
T Consensus       622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999998854

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=302.69  Aligned_cols=234  Identities=17%  Similarity=0.111  Sum_probs=190.4

Q ss_pred             cccccccccccccccceeeeeEEeEEe----------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceee---
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR----------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQ---  193 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~---  193 (464)
                      +....+|++.+.||+|+||.||+|++.          ++.||+|++...        ..+.+| +++++++||||++   
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~  109 (352)
T 2jii_A           38 DKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWK  109 (352)
T ss_dssp             CTTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHH
T ss_pred             cccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhh
Confidence            334458999999999999999999984          679999999863        357788 9999999999998   


Q ss_pred             ------------eeceeee-CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------
Q 039021          194 ------------FLGSIVL-GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------  240 (464)
Q Consensus       194 ------------~~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------  240 (464)
                                  +++++.. ++..++||||+ +|+|.+++...  ..+++.+++.++.||+.                  
T Consensus       110 ~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~  188 (352)
T 2jii_A          110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAE  188 (352)
T ss_dssp             HHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGG
T ss_pred             hhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHH
Confidence                        5666665 67889999999 99999999875  78999999999999987                  


Q ss_pred             hhcccCCC--ceeEecchhhhhhcccC----------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCC
Q 039021          241 NLLQDEGD--HLKIGEYWVQMFYEQIH----------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQ  308 (464)
Q Consensus       241 Nill~~~~--~~kl~DFG~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~  308 (464)
                      |||++.++  .+||+|||+++......          ....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  268 (352)
T 2jii_A          189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW  268 (352)
T ss_dssp             GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            99999998  89999999998765321          2235999999999999999999999999999999999999999


Q ss_pred             CCCc--cc-hhcccc--ccCCCCccC-----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          309 TNNS--FD-FMHLKS--VNFEPKFQI-----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       309 ~~~~--~~-~~~~~~--~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ....  .. ......  ......+..     ..+++++.+||.+||+.||++|||+.+|++.|+.+......
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~  340 (352)
T 2jii_A          269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV  340 (352)
T ss_dssp             GGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             ccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence            8753  11 111111  111111111     24689999999999999999999999999999998776654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.5e-37  Score=293.36  Aligned_cols=233  Identities=13%  Similarity=0.123  Sum_probs=187.3

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeecee-eeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSI-VLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~-~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|++  .++.||+|++....     ....+.+| .+++.++|++++..+..+ .+.+..++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            4699999999999999999997  48899999977532     23457788 999999988776666655 567788999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcccC
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||+ +|+|.+++.. ...+++.+++.++.|++.                  |||+   +.++.+||+|||+++......
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            9999 8899999974 468999999999999987                  9999   788999999999998765432


Q ss_pred             C----------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccc---cCCCCcc
Q 039021          266 P----------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSV---NFEPKFQ  328 (464)
Q Consensus       266 ~----------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~---~~~~~~~  328 (464)
                      .          ...||+.|+|||++.+..++.++|||||||++|+|++|+.||......    .......   ..+....
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL  242 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh
Confidence            2          345999999999999999999999999999999999999999875411    1111110   1111111


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ...+|+++.+|+.+||+.||++|||+.++++.|+.+......
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~  284 (296)
T 4hgt_A          243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF  284 (296)
T ss_dssp             TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred             hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence            155799999999999999999999999999999998776654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=295.87  Aligned_cols=225  Identities=19%  Similarity=0.240  Sum_probs=181.9

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      |.....||+|+||.||+|.+.  ++.||+|.+....   ....+.+.+| .+++.++||||+++++++.+.+..++||||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            344459999999999999984  7899999998642   2345678888 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc---cCCCHHHHHHHHHHHHh------------------hhcccC-CCceeEecchhhhhhccc---C
Q 039021          211 LPKGNLKGILSKK---VRLDLPTALRYALDIAR------------------NLLQDE-GDHLKIGEYWVQMFYEQI---H  265 (464)
Q Consensus       211 ~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~------------------Nill~~-~~~~kl~DFG~a~~~~~~---~  265 (464)
                      +++++|.+++...   ..+++..+..++.|++.                  ||+++. ++.+||+|||+++.....   .
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~  180 (295)
T 2clq_A          101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT  180 (295)
T ss_dssp             CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred             CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence            9999999999764   35678889999999986                  999987 899999999999876532   2


Q ss_pred             CCCcCCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCCCcc-c-h-hccccccCCCCccCCCCcHHHHHHH
Q 039021          266 PNQENSQRNDNSSIASNVL--DDTKKDICSFGYIFYQMLEGKHLQTNNSF-D-F-MHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                      ....||+.|+|||++.+..  ++.++||||||+++|+|++|+.||..... . . .........+..+ ..+++++.+||
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  259 (295)
T 2clq_A          181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP-ESMSAEAKAFI  259 (295)
T ss_dssp             CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC-TTSCHHHHHHH
T ss_pred             cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccccc-ccCCHHHHHHH
Confidence            3445999999999997643  78999999999999999999999976541 1 1 1111112223333 56899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||+.||++|||+.++++|-+
T Consensus       260 ~~~l~~dp~~Rps~~~ll~~~~  281 (295)
T 2clq_A          260 LKCFEPDPDKRACANDLLVDEF  281 (295)
T ss_dssp             HHTTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHccCChhhCCCHHHHhcChh
Confidence            9999999999999999998743

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=4.7e-38  Score=307.48  Aligned_cols=231  Identities=13%  Similarity=0.114  Sum_probs=190.5

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHH--------------HHHhHHHH-HHHHhcCCCceeeeec
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVK--------------MVLSAKDN-CKLRELRHPNILQFLG  196 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~e-~~l~~l~hpnIv~~~~  196 (464)
                      .+|++.+.||+|+||.||+|.+.++.||+|++.........              ....+.+| .++++++||||+++++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~  110 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG  110 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred             CceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            37999999999999999999999999999999853211110              11678889 9999999999999999


Q ss_pred             eeeeCCceEEEEEecCCCChHHH------Hhh--ccCCCHHHHHHHHHHHHh-------------------hhcccCCCc
Q 039021          197 SIVLGEEMILITEYLPKGNLKGI------LSK--KVRLDLPTALRYALDIAR-------------------NLLQDEGDH  249 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~------l~~--~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~  249 (464)
                      ++.+.+..++||||+++|+|.++      +..  ...+++..++.++.|++.                   |||++.++.
T Consensus       111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~  190 (348)
T 2pml_X          111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR  190 (348)
T ss_dssp             EEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSC
T ss_pred             EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCc
Confidence            99999999999999999999998      665  578999999999999986                   999999999


Q ss_pred             eeEecchhhhhhccc-CCCCcCCCCcccccccccC-CCCC-cccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCC
Q 039021          250 LKIGEYWVQMFYEQI-HPNQENSQRNDNSSIASNV-LDDT-KKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEP  325 (464)
Q Consensus       250 ~kl~DFG~a~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~  325 (464)
                      +||+|||++...... .....||+.|+|||++.+. .++. ++||||||+++|+|++|..||..... ............
T Consensus       191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~  270 (348)
T 2pml_X          191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI  270 (348)
T ss_dssp             EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC
T ss_pred             EEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc
Confidence            999999999876432 3345699999999999877 6766 99999999999999999999987653 222221211122


Q ss_pred             CccC------------------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          326 KFQI------------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       326 ~~~~------------------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .++.                  ..+++++.+||.+||+.||.+|||+.++++|.+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~  325 (348)
T 2pml_X          271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW  325 (348)
T ss_dssp             CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            2221                  457899999999999999999999999998753

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1.6e-37  Score=294.67  Aligned_cols=223  Identities=20%  Similarity=0.227  Sum_probs=187.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--------  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--------  200 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++....       ..+.+| +++++++||||+++++++..        
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS   83 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence            36899999999999999999995  8999999998642       256778 99999999999999998864        


Q ss_pred             --------CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeE
Q 039021          201 --------GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKI  252 (464)
Q Consensus       201 --------~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl  252 (464)
                              ...+++||||+++|+|.+++...  ..+++..++.++.|++.                  |||++.++.+||
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  163 (284)
T 2a19_B           84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI  163 (284)
T ss_dssp             -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEE
Confidence                    44589999999999999999653  67999999999999986                  999999999999


Q ss_pred             ecchhhhhhcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCC
Q 039021          253 GEYWVQMFYEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQIS  330 (464)
Q Consensus       253 ~DFG~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  330 (464)
                      +|||+++......  ....||+.|+|||++.+..++.++||||||+++|+|++|..||...... ......   .. .+.
T Consensus       164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~~~~~---~~-~~~  238 (284)
T 2a19_B          164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF-FTDLRD---GI-ISD  238 (284)
T ss_dssp             CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH-HHHHHT---TC-CCT
T ss_pred             CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH-HHHhhc---cc-ccc
Confidence            9999998765432  3345999999999999999999999999999999999999888543311 111111   11 124


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+++++.++|.+||+.||.+|||+.+++++|+.+..
T Consensus       239 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          239 IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            578999999999999999999999999999998743

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6e-37  Score=293.95  Aligned_cols=230  Identities=19%  Similarity=0.216  Sum_probs=185.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCch-HHHHHhHHHH-HHHHhcCCCceeeeeceee--eCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP-VKMVLSAKDN-CKLRELRHPNILQFLGSIV--LGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~-~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~--~~~~~~l  206 (464)
                      +|++++.||+|+||.||+|.+.  ++.||+|++....... ......+.+| .++++++||||+++++++.  +....++
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM   85 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence            6899999999999999999984  7899999998642111 2345678889 9999999999999999984  4568899


Q ss_pred             EEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--
Q 039021          207 ITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--  264 (464)
                      ||||+++| |.+++..  ...+++..+..++.|++.                  |||++.++.+||+|||++......  
T Consensus        86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~  164 (305)
T 2wtk_C           86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA  164 (305)
T ss_dssp             EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred             EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence            99999986 7777764  467999999999999986                  999999999999999999876422  


Q ss_pred             ---CCCCcCCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHH
Q 039021          265 ---HPNQENSQRNDNSSIASNVL--DDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQL  339 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  339 (464)
                         .....||+.|+|||++.+..  ++.++||||||+++|+|++|+.||..................++ ..+++++.+|
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~l~~l  243 (305)
T 2wtk_C          165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP-GDCGPPLSDL  243 (305)
T ss_dssp             SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC-SSSCHHHHHH
T ss_pred             ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC-CccCHHHHHH
Confidence               12344999999999987643  37799999999999999999999988763222222222223333 5689999999


Q ss_pred             HHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          340 IAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       340 i~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      |.+||+.||++|||+.++++|.+..
T Consensus       244 i~~~l~~dp~~Rps~~~ll~~~~~~  268 (305)
T 2wtk_C          244 LKGMLEYEPAKRFSIRQIRQHSWFR  268 (305)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHHHccCChhhCCCHHHHhcCcccc
Confidence            9999999999999999999997654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.3e-37  Score=301.80  Aligned_cols=231  Identities=15%  Similarity=0.097  Sum_probs=186.8

Q ss_pred             ccccccc-cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceE
Q 039021          131 ELNTLHS-SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       131 ~~~~~~~-~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~  205 (464)
                      ...|.+. +.||+|+||.||+|++.  ++.||+|++....... .....+.+| .+++++ +||||+++++++.+.+..+
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~  105 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII  105 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence            3357766 88999999999999985  8899999998643322 234567778 899998 5699999999999999999


Q ss_pred             EEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccC---CCceeEecchhhhhhc
Q 039021          206 LITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDE---GDHLKIGEYWVQMFYE  262 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl~DFG~a~~~~  262 (464)
                      +||||+++|+|.+++..  ...+++.+++.++.|++.                  |||++.   ++.+||+|||+++...
T Consensus       106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~  185 (327)
T 3lm5_A          106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG  185 (327)
T ss_dssp             EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence            99999999999999865  368999999999999987                  999987   7899999999998765


Q ss_pred             ccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh-ccccc--cCCCCccCCCCcHHHH
Q 039021          263 QIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM-HLKSV--NFEPKFQISRCPNRLK  337 (464)
Q Consensus       263 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~  337 (464)
                      ...  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ..+..  ...+......+++.+.
T Consensus       186 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  265 (327)
T 3lm5_A          186 HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLAT  265 (327)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             CccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHH
Confidence            432  334599999999999999999999999999999999999999988762222 11111  1111112256899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||.+||+.||++|||+.++++|.+
T Consensus       266 ~li~~~L~~dP~~Rpt~~~ll~h~~  290 (327)
T 3lm5_A          266 DFIQSLLVKNPEKRPTAEICLSHSW  290 (327)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred             HHHHHHcCCChhhCcCHHHHhCCHh
Confidence            9999999999999999999998865

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=4e-37  Score=292.77  Aligned_cols=230  Identities=20%  Similarity=0.187  Sum_probs=190.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++...... ......+.+| +++++++||||+++++++.+.+..++||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            36999999999999999999984  889999999764322 2234567888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC---CceeEecchhhhhhcccCC-
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG---DHLKIGEYWVQMFYEQIHP-  266 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~---~~~kl~DFG~a~~~~~~~~-  266 (464)
                      ||+++++|.+++.....+++.+++.++.|++.                  ||+++.+   +.+||+|||+++....... 
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence            99999999999988789999999999999987                  9999764   4699999999987654332 


Q ss_pred             -CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-CCCcc-CCCCcHHHHHHHHH
Q 039021          267 -NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-EPKFQ-ISRCPNRLKQLIAQ  342 (464)
Q Consensus       267 -~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~~li~~  342 (464)
                       ...||+.|+|||++.+ .++.++||||||+++|+|++|..||..... +.......+. ....+ ...+++++.+||.+
T Consensus       181 ~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (287)
T ss_dssp             SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHH
Confidence             2348999999998875 488999999999999999999999988762 2222222211 11111 14579999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ||..||++|||+.++++|.+.
T Consensus       260 ~l~~dp~~Rps~~ell~hp~~  280 (287)
T 2wei_A          260 MLTFHPSLRITATQCLEHPWI  280 (287)
T ss_dssp             HTCSSGGGSCCHHHHHHSHHH
T ss_pred             HcccChhhCcCHHHHhcCHHH
Confidence            999999999999999998653

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.9e-38  Score=311.40  Aligned_cols=233  Identities=16%  Similarity=0.162  Sum_probs=187.3

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC--ceE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE--EMI  205 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~--~~~  205 (464)
                      ..+|.+.+.||+|+||.||+|++.  |+.||+|++.....  ....+.+.+| +++++++||||+++++++.+.+  ..+
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence            457999999999999999999995  88999999986422  2224566788 9999999999999999998765  789


Q ss_pred             EEEEecCCCChHHHHhhcc---CCCHHHHHHHHHHHHh------------------hhcc----cCCCceeEecchhhhh
Q 039021          206 LITEYLPKGNLKGILSKKV---RLDLPTALRYALDIAR------------------NLLQ----DEGDHLKIGEYWVQMF  260 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~------------------Nill----~~~~~~kl~DFG~a~~  260 (464)
                      +||||+++|+|.+++....   .+++..++.++.||+.                  |||+    +.++.+||+|||+++.
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            9999999999999997643   3999999999999987                  9998    7778899999999987


Q ss_pred             hcccC--CCCcCCCCccccccccc--------CCCCCcccchhHHHHHHHHHhCCCCCCCCc-----cchhccccccCCC
Q 039021          261 YEQIH--PNQENSQRNDNSSIASN--------VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-----FDFMHLKSVNFEP  325 (464)
Q Consensus       261 ~~~~~--~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-----~~~~~~~~~~~~~  325 (464)
                      .....  ....||+.|+|||++.+        ..++.++|||||||++|||++|+.||....     .+.+.....+.++
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (396)
T ss_dssp             CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred             ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence            65332  34559999999999865        567789999999999999999999997432     1222211111111


Q ss_pred             ------------------Ccc-----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          326 ------------------KFQ-----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       326 ------------------~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                                        ..+     ...+++.+.+++.+||+.||++|||+.++++.++.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence                              000     0234678899999999999999999999999998874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=8.6e-37  Score=296.02  Aligned_cols=235  Identities=15%  Similarity=0.223  Sum_probs=170.1

Q ss_pred             cccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH--HHHHhcCCCceeeeeceeeeCCc
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      .....+|++.+.||+|+||.||+|.++  |+.||+|++.....  ......+..|  .+++.++||||+++++++.+.+.
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~   95 (327)
T 3aln_A           18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD   95 (327)
T ss_dssp             CCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE
T ss_pred             ccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc
Confidence            334457899999999999999999995  89999999986532  2233344444  57888899999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhh-----ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhh
Q 039021          204 MILITEYLPKGNLKGILSK-----KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      .++||||+++ +|.+++..     ...+++..+..++.|++.                   |||++.++.+||+|||+++
T Consensus        96 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           96 CWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             eEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            9999999986 88888763     568999999999999976                   9999999999999999998


Q ss_pred             hhcccC--CCCcCCCCccccccc----ccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC--
Q 039021          260 FYEQIH--PNQENSQRNDNSSIA----SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI--  329 (464)
Q Consensus       260 ~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~--  329 (464)
                      ......  ....||+.|+|||++    .+..++.++|||||||++|+|++|+.||....  .+.......+..+.++.  
T Consensus       175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T 3aln_A          175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE  254 (327)
T ss_dssp             C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred             ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence            765432  223599999999998    45678999999999999999999999998754  22222222332332221  


Q ss_pred             -CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          330 -SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       330 -~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                       ..+++++.+||.+||+.||++|||+.++++|.+...
T Consensus       255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             cccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence             458999999999999999999999999999876543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3.7e-37  Score=309.51  Aligned_cols=228  Identities=17%  Similarity=0.187  Sum_probs=186.8

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc------CCCceeeeeceeeeC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL------RHPNILQFLGSIVLG  201 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l------~hpnIv~~~~~~~~~  201 (464)
                      ..+|++.+.||+|+||.||+|.+.  ++.||+|++...    ......+.+| ++++.+      +|+||+++++++...
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~  171 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR  171 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence            346999999999999999999984  789999999853    3344566677 777776      678999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCc--eeEecchhhh
Q 039021          202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDH--LKIGEYWVQM  259 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~--~kl~DFG~a~  259 (464)
                      +.+++||||+. |+|.+++...  ..+++..++.++.||+.                  |||++.++.  +||+|||+|+
T Consensus       172 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~  250 (429)
T 3kvw_A          172 NHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC  250 (429)
T ss_dssp             TEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             CeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence            99999999996 5999999764  35999999999999987                  999999987  9999999998


Q ss_pred             hhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--c--------------
Q 039021          260 FYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--N--------------  322 (464)
Q Consensus       260 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~--------------  322 (464)
                      ..........||+.|+|||++.+..++.++|||||||++|||++|..||.+... +....+..  +              
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~  330 (429)
T 3kvw_A          251 YEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK  330 (429)
T ss_dssp             ETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHH
T ss_pred             ecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhh
Confidence            877666677799999999999999999999999999999999999999987651 11110000  0              


Q ss_pred             ------CCC-----------------------------Cc------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          323 ------FEP-----------------------------KF------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       323 ------~~~-----------------------------~~------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                            ..+                             ..      .....++++.+||.+||+.||++|||+.|+++|.
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hp  410 (429)
T 3kvw_A          331 NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHP  410 (429)
T ss_dssp             HHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred             hccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCCh
Confidence                  000                             00      0012478899999999999999999999999986


Q ss_pred             HH
Q 039021          362 EE  363 (464)
Q Consensus       362 ~~  363 (464)
                      |.
T Consensus       411 w~  412 (429)
T 3kvw_A          411 WL  412 (429)
T ss_dssp             TT
T ss_pred             hh
Confidence            53

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.2e-37  Score=304.69  Aligned_cols=228  Identities=19%  Similarity=0.203  Sum_probs=168.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC------C
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG------E  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~------~  202 (464)
                      .+|++.+.||+|+||.||+|.+.  |+.||+|++..... .......+.+| .+|+.++||||+++++++...      .
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46999999999999999999984  88999999976432 23445677788 999999999999999998754      5


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+|+||||+ +++|.++++. +.+++..+..++.||++                  |||++.++.+||+|||+++.....
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~  185 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE  185 (367)
T ss_dssp             CCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred             eEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence            689999999 6799999876 57999999999999987                  999999999999999999987766


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--c------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--N------------------  322 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~------------------  322 (464)
                      .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+ .+....+..  +                  
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~  265 (367)
T 2fst_X          186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY  265 (367)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHH
T ss_pred             CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence            556679999999999887 788999999999999999999999998766 111111100  0                  


Q ss_pred             -----CCC--Ccc--CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 -----FEP--KFQ--ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 -----~~~--~~~--~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                           ..+  .+.  ...+++++.+||.+||+.||++|||+.++++|.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~  314 (367)
T 2fst_X          266 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  314 (367)
T ss_dssp             HHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence                 000  000  1346889999999999999999999999999865

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5.9e-37  Score=292.63  Aligned_cols=233  Identities=13%  Similarity=0.128  Sum_probs=188.4

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeecee-eeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSI-VLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~-~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|++  .++.||+|++.....     ...+.+| .+++.++|++++..+..+ ...+..++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence            4699999999999999999997  489999999876432     2357788 999999988766655555 567788999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcccC
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||+ +++|.+++.. ...+++.+++.++.|++.                  |||+   +.++.+||+|||+++......
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence            9999 8899999974 568999999999999987                  9999   478899999999998766432


Q ss_pred             ----------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc----chhcccc---ccCCCCcc
Q 039021          266 ----------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF----DFMHLKS---VNFEPKFQ  328 (464)
Q Consensus       266 ----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~----~~~~~~~---~~~~~~~~  328 (464)
                                ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....    +......   ...+....
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL  242 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHH
Confidence                      234599999999999999999999999999999999999999987541    1111111   11111111


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ...+|+++.+|+.+||+.||++|||+.++++.|+.+......
T Consensus       243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~  284 (296)
T 3uzp_A          243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF  284 (296)
T ss_dssp             TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence            256899999999999999999999999999999998765543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=304.65  Aligned_cols=235  Identities=16%  Similarity=0.266  Sum_probs=187.8

Q ss_pred             cccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ...+|++.+.||+|+||.||+|.+++ .||+|+++..... ....+.+.+| .++++++||||+++++++.+.+..++||
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDN-EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCC-CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCC-HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            34478999999999999999999876 4999999764322 2233467788 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----
Q 039021          209 EYLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----  264 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----  264 (464)
                      ||+++++|.+++...+ .+++..++.++.|++.                  |||++ ++.+||+|||+++.....     
T Consensus       109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~  187 (319)
T 2y4i_B          109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR  187 (319)
T ss_dssp             BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred             ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence            9999999999998753 7999999999999987                  99998 678999999998765321     


Q ss_pred             ---CCCCcCCCCccccccccc---------CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccccCCCCccCCC
Q 039021          265 ---HPNQENSQRNDNSSIASN---------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSVNFEPKFQISR  331 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~  331 (464)
                         .....||+.|+|||++.+         ..++.++|||||||++|||++|+.||...... ..........+......
T Consensus       188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  267 (319)
T 2y4i_B          188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIG  267 (319)
T ss_dssp             CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSS
T ss_pred             ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCC
Confidence               122348999999999874         45788999999999999999999999887633 33333333344444456


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      +++++.+++.+||..||++|||+.++++.|+.+...
T Consensus       268 ~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          268 MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            889999999999999999999999999999877543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3e-37  Score=301.73  Aligned_cols=231  Identities=19%  Similarity=0.191  Sum_probs=181.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCch--HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP--VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~--~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      .+|++.+.||+|+||.||+|++.  |+.||+|++.......  ....+.+.+| .++++++||||+++++++.+.+..++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   89 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence            46999999999999999999984  8899999997543221  1123457788 99999999999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          207 ITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      ||||+++ +|.+++... ..+++.++..++.|++.                  |||++.++.+||+|||+++......  
T Consensus        90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  168 (346)
T 1ua2_A           90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  168 (346)
T ss_dssp             EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence            9999986 899888764 57999999999999986                  9999999999999999998775332  


Q ss_pred             -CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--cCC----------------
Q 039021          266 -PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--NFE----------------  324 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~~~----------------  324 (464)
                       ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.. .+....+..  +.+                
T Consensus       169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  248 (346)
T 1ua2_A          169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT  248 (346)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccc
Confidence             33459999999999876 458899999999999999999999998765 211111100  000                


Q ss_pred             ----CCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          325 ----PKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       325 ----~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                          +..+    ...+++++.+||.+||+.||++|||+.|+++|.+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f  295 (346)
T 1ua2_A          249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF  295 (346)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             ccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence                0000    13467899999999999999999999999998653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1e-36  Score=300.80  Aligned_cols=228  Identities=15%  Similarity=0.115  Sum_probs=177.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++..... .......+.+| .+++.++||||+++++++...+      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36999999999999999999984  88999999986432 23445677888 9999999999999999998654      


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..++||||+++ +|.+++..  .+++..+..++.||+.                  |||++.++.+||+|||+++.....
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  180 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  180 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-------
T ss_pred             ceEEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccc
Confidence            68999999985 88888863  6999999999999986                  999999999999999999876543


Q ss_pred             C--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccccc-------------------
Q 039021          265 H--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVN-------------------  322 (464)
Q Consensus       265 ~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~-------------------  322 (464)
                      .  ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+. +....+...                   
T Consensus       181 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  260 (371)
T 2xrw_A          181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY  260 (371)
T ss_dssp             ---------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHH
T ss_pred             cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence            2  334599999999999999999999999999999999999999987652 111111100                   


Q ss_pred             --CCCCcc--------------C-----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          323 --FEPKFQ--------------I-----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       323 --~~~~~~--------------~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                        ..+.+.              .     ...++++.+||.+||+.||++|||+.++++|.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  322 (371)
T 2xrw_A          261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI  322 (371)
T ss_dssp             HHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred             HhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence              000000              0     0126789999999999999999999999999765

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.2e-37  Score=301.27  Aligned_cols=234  Identities=18%  Similarity=0.203  Sum_probs=178.4

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HH--HHhcCCCceeeeeceeee-----CCc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CK--LRELRHPNILQFLGSIVL-----GEE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~--l~~l~hpnIv~~~~~~~~-----~~~  203 (464)
                      .+|++.+.||+|+||.||+|+++++.||+|++....      ...+..| ++  ++.++||||+++++.+..     ...
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             HHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            378999999999999999999999999999998531      2233344 44  445899999999986543     335


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh---------------------------hhcccCCCceeEecch
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR---------------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~---------------------------Nill~~~~~~kl~DFG  256 (464)
                      +++||||+++|+|.+++... ..++..+..++.|+++                           |||++.++.+||+|||
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG  165 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG  165 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred             EEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence            78999999999999999765 4589999999999974                           9999999999999999


Q ss_pred             hhhhhccc-----------CCCCcCCCCccccccccc-------CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhc
Q 039021          257 VQMFYEQI-----------HPNQENSQRNDNSSIASN-------VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMH  317 (464)
Q Consensus       257 ~a~~~~~~-----------~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~  317 (464)
                      +++.....           .....||+.|+|||++.+       ..++.++|||||||++|||++|..||.... .....
T Consensus       166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~  245 (336)
T 3g2f_A          166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ  245 (336)
T ss_dssp             TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred             ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence            99865421           123359999999999986       456678999999999999999977664322 11000


Q ss_pred             c-------------------ccccCCCCccC-----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcCCC
Q 039021          318 L-------------------KSVNFEPKFQI-----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSA  372 (464)
Q Consensus       318 ~-------------------~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~~~  372 (464)
                      .                   .....++.++.     ..+++++.+||.+||+.||++|||+.++++.|+.+...+.+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence            0                   00111222221     2245689999999999999999999999999999987666543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=8.1e-37  Score=297.89  Aligned_cols=229  Identities=18%  Similarity=0.277  Sum_probs=184.8

Q ss_pred             cccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHh--cCCCceeeeeceeeeCC----ce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE--LRHPNILQFLGSIVLGE----EM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~--l~hpnIv~~~~~~~~~~----~~  204 (464)
                      .+|.+.+.||+|+||.||+|+++++.||+|++...      ....+.+| ++++.  ++||||+++++++....    ..
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            46999999999999999999999999999999752      12355667 88877  79999999999998875    78


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------------hhcccCCCceeEecchhh
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ++||||+++|+|.+++.+. .+++.+++.++.|++.                          |||++.++.+||+|||++
T Consensus       116 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~  194 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  194 (342)
T ss_dssp             EEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence            9999999999999999764 7999999999999974                          999999999999999999


Q ss_pred             hhhcccC-------CCCcCCCCcccccccccCC------CCCcccchhHHHHHHHHHhC----------CCCCCCCcc--
Q 039021          259 MFYEQIH-------PNQENSQRNDNSSIASNVL------DDTKKDICSFGYIFYQMLEG----------KHLQTNNSF--  313 (464)
Q Consensus       259 ~~~~~~~-------~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGv~l~el~~g----------~~p~~~~~~--  313 (464)
                      +......       ....||+.|+|||++.+..      ++.++|||||||++|||++|          ..||.....  
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  274 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  274 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence            8765432       3345999999999987652      33689999999999999999          788876431  


Q ss_pred             ---chhcc-cc-ccCCCCcc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          314 ---DFMHL-KS-VNFEPKFQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       314 ---~~~~~-~~-~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                         ..... .. ....+..+    ...+++.+.+||.+||+.||++|||+.+++++|+.+...
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence               11111 11 11122222    124567899999999999999999999999999998643

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=8.8e-37  Score=301.23  Aligned_cols=228  Identities=17%  Similarity=0.203  Sum_probs=183.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce----
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM----  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~----  204 (464)
                      .+|.+.+.||+|+||.||+|.+.  |+.||+|++..... .......+.+| .+++.++||||+++++++...+..    
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46999999999999999999984  88999999986432 24455677888 999999999999999999877654    


Q ss_pred             --EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          205 --ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       205 --~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                        ++||||+. |+|.+++..  .+++..+..++.|++.                  |||++.++.+||+|||+++.....
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  197 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  197 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred             eEEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence              99999998 589888854  5999999999999987                  999999999999999999987766


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--c------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--N------------------  322 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~------------------  322 (464)
                      .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. .+....+..  +                  
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  277 (371)
T 4exu_A          198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY  277 (371)
T ss_dssp             --CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHH
T ss_pred             cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhh
Confidence            666779999999999987 788999999999999999999999998765 111111100  0                  


Q ss_pred             -------CCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          323 -------FEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       323 -------~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                             ....+  ....+++++.+||.+||+.||++|||+.++++|.+.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  327 (371)
T 4exu_A          278 IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  327 (371)
T ss_dssp             HHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             hhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence                   00000  013578999999999999999999999999998653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.1e-37  Score=304.30  Aligned_cols=227  Identities=16%  Similarity=0.155  Sum_probs=178.8

Q ss_pred             cccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC---
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG---  201 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~---  201 (464)
                      +....+|++.+.||+|+||.||+|++.  |+.||+|++....       ....+| .+|+.++||||++++++|...   
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   75 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDE   75 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHHcCCCCccchhheeeecCcc
Confidence            345568999999999999999999984  8999999997542       123468 999999999999999998543   


Q ss_pred             -----------------------------------CceEEEEEecCCCChHHHHh----hccCCCHHHHHHHHHHHHh--
Q 039021          202 -----------------------------------EEMILITEYLPKGNLKGILS----KKVRLDLPTALRYALDIAR--  240 (464)
Q Consensus       202 -----------------------------------~~~~lv~E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~--  240 (464)
                                                         ..+++||||+++ +|.+.+.    ....+++..+..++.||++  
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL  154 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV  154 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence                                               348899999985 8777764    3578999999999999987  


Q ss_pred             ----------------hhccc-CCCceeEecchhhhhhccc--CCCCcCCCCcccccccccC-CCCCcccchhHHHHHHH
Q 039021          241 ----------------NLLQD-EGDHLKIGEYWVQMFYEQI--HPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQ  300 (464)
Q Consensus       241 ----------------Nill~-~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~e  300 (464)
                                      |||++ .++.+||+|||+|+.....  .....||+.|+|||++.+. .++.++|||||||++||
T Consensus       155 ~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (383)
T 3eb0_A          155 GFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE  234 (383)
T ss_dssp             HHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence                            99997 6789999999999876433  2344589999999998774 58999999999999999


Q ss_pred             HHhCCCCCCCCc-cchhccccc--cC-----------------CCC--------ccCCCCcHHHHHHHHHHcccCCCCCC
Q 039021          301 MLEGKHLQTNNS-FDFMHLKSV--NF-----------------EPK--------FQISRCPNRLKQLIAQCTNKDPSKRP  352 (464)
Q Consensus       301 l~~g~~p~~~~~-~~~~~~~~~--~~-----------------~~~--------~~~~~~~~~~~~li~~cl~~dp~~Rp  352 (464)
                      |++|+.||.+.. .+....+..  +.                 .+.        ..+..+|+++.+||.+||+.||++||
T Consensus       235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (383)
T 3eb0_A          235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI  314 (383)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence            999999998865 221111100  00                 000        01244789999999999999999999


Q ss_pred             CHHHHHHHHH
Q 039021          353 TFAAVIITLE  362 (464)
Q Consensus       353 t~~~i~~~l~  362 (464)
                      |+.|+++|.+
T Consensus       315 t~~e~l~hp~  324 (383)
T 3eb0_A          315 NPYEAMAHPF  324 (383)
T ss_dssp             CHHHHHTSGG
T ss_pred             CHHHHhcCHH
Confidence            9999999854

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.1e-36  Score=299.75  Aligned_cols=228  Identities=17%  Similarity=0.174  Sum_probs=185.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~  203 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++...  ........+.+| +++++++||||+++++++...     ..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            46999999999999999999984  889999999853  224455678889 999999999999999999765     36


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      .++||||+.+ +|.++++.. .+++.++..++.|++.                  |||++.++.+||+|||+++......
T Consensus       105 ~~iv~e~~~~-~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          105 VYIVQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             EEEEEECCSE-EHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEEEcccCc-CHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence            8999999985 999998764 7999999999999987                  9999999999999999998765322


Q ss_pred             ------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--cC------------
Q 039021          266 ------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--NF------------  323 (464)
Q Consensus       266 ------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~~------------  323 (464)
                            ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. .+....+..  +.            
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  262 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL  262 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence                  23359999999998754 558999999999999999999999998765 221111100  00            


Q ss_pred             -------------CCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 -------------EPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 -------------~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                   ...+  ....+++++.+||.+||+.||++|||+.++++|.+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  317 (364)
T 3qyz_A          263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL  317 (364)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence                         0000  014578999999999999999999999999998653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3.2e-36  Score=296.57  Aligned_cols=232  Identities=13%  Similarity=0.111  Sum_probs=188.6

Q ss_pred             ccccccccccccccccccceeeeeEEeE-----E--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC---CCceee
Q 039021          125 VNFDISELNTLHSSMVEQGVFGESQTAK-----W--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR---HPNILQ  193 (464)
Q Consensus       125 ~~i~~~~~~~~~~~~lg~G~~g~V~~~~-----~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~---hpnIv~  193 (464)
                      ..+.....+|.+.+.||+|+||.||+|.     .  .++.||+|++....      ...+..| ++++.++   |+||++
T Consensus        58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~  131 (365)
T 3e7e_A           58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMK  131 (365)
T ss_dssp             CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCC
T ss_pred             eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhh
Confidence            3455566689999999999999999994     2  48899999998632      2345666 7777776   999999


Q ss_pred             eeceeeeCCceEEEEEecCCCChHHHHhh-----ccCCCHHHHHHHHHHHHh------------------hhcccC----
Q 039021          194 FLGSIVLGEEMILITEYLPKGNLKGILSK-----KVRLDLPTALRYALDIAR------------------NLLQDE----  246 (464)
Q Consensus       194 ~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~------------------Nill~~----  246 (464)
                      +++++...+..+||||||++|+|.+++..     ...+++..++.++.||++                  |||++.    
T Consensus       132 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          132 FYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred             hheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence            99999999999999999999999999973     467999999999999987                  999998    


Q ss_pred             -------CCceeEecchhhhhhcc-----cCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc
Q 039021          247 -------GDHLKIGEYWVQMFYEQ-----IHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD  314 (464)
Q Consensus       247 -------~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~  314 (464)
                             ++.+||+|||+|+....     ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  291 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG  291 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence                   89999999999976542     223445999999999999999999999999999999999999999654421


Q ss_pred             hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC-CCHHHHHHHHHHHHHH
Q 039021          315 FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR-PTFAAVIITLEEVSAC  367 (464)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R-pt~~~i~~~l~~~~~~  367 (464)
                      ....  .   ..+.....++.+.+++..||+.+|.+| |++.++.+.|+.+...
T Consensus       292 ~~~~--~---~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          292 ECKP--E---GLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             EEEE--C---SCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ceee--c---hhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            1111  1   111112357889999999999999999 5788888888877554

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.7e-36  Score=292.11  Aligned_cols=234  Identities=15%  Similarity=0.133  Sum_probs=187.7

Q ss_pred             ccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC--CCceeeeeceeeeCC
Q 039021          127 FDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR--HPNILQFLGSIVLGE  202 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~--hpnIv~~~~~~~~~~  202 (464)
                      +.+...+|++.+.||+|+||.||+|.+. ++.||+|++...... ......+.+| .++++++  ||||+++++++.+.+
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~  101 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  101 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCC
Confidence            4555567999999999999999999985 889999999865432 4456778889 9999997  599999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      ..++||| +.+++|.+++...+.+++.+++.++.|+++                  |||+++ +.+||+|||+++.....
T Consensus       102 ~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~  179 (313)
T 3cek_A          102 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD  179 (313)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred             EEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence            9999999 567899999998889999999999999987                  999964 88999999999876533


Q ss_pred             C-----CCCcCCCCccccccccc-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCcc--chhcccc-ccCCC
Q 039021          265 H-----PNQENSQRNDNSSIASN-----------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--DFMHLKS-VNFEP  325 (464)
Q Consensus       265 ~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~~~~~~~-~~~~~  325 (464)
                      .     ....||+.|+|||++.+           ..++.++|||||||++|+|++|..||.....  ....... .....
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  259 (313)
T 3cek_A          180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  259 (313)
T ss_dssp             ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc
Confidence            2     23358999999999875           4678899999999999999999999987542  1111111 11222


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .++ ...++++.+||.+||+.||++|||+.++++|.+..
T Consensus       260 ~~~-~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          260 EFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             CCC-CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCc-ccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence            222 45689999999999999999999999999997654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=8.4e-37  Score=299.11  Aligned_cols=230  Identities=17%  Similarity=0.161  Sum_probs=181.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--------  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--------  200 (464)
                      .+|++.+.||+|+||.||+|+++  |+.||+|++...... ......+.+| .++++++||||+++++++..        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            47999999999999999999984  889999998764322 2223456678 99999999999999999987        


Q ss_pred             CCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      .+.+++||||+++ +|.+.+.. ...+++.++..++.|++.                  |||++.++.+||+|||+++..
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            3468999999986 77777754 467999999999999987                  999999999999999999876


Q ss_pred             ccc-------CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccc---cccCCCCc-c
Q 039021          262 EQI-------HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLK---SVNFEPKF-Q  328 (464)
Q Consensus       262 ~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~---~~~~~~~~-~  328 (464)
                      ...       .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... ....+   .....+.. +
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  254 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP  254 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            421       123348999999999876 56899999999999999999999999876521 11111   01001100 0


Q ss_pred             C--------------------------CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          329 I--------------------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       329 ~--------------------------~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      .                          ...++++.+||.+||+.||++|||+.|+++|.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  315 (351)
T 3mi9_A          255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF  315 (351)
T ss_dssp             TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence            0                          0026789999999999999999999999998653

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=4.9e-36  Score=289.25  Aligned_cols=231  Identities=13%  Similarity=0.181  Sum_probs=171.9

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv  207 (464)
                      -.+|++.+.||+|+||.||+|+++  |+.||+|++..... .....+.+.++ .+++.++||||+++++++.+.+..++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            347899999999999999999994  88999999986532 23334445555 778889999999999999999999999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccC--
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIH--  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~--  265 (464)
                      |||+ ++.+..+... .+.+++..+..++.|+++                   |||++.++.+||+|||+++......  
T Consensus       103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (318)
T 2dyl_A          103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK  181 (318)
T ss_dssp             ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence            9999 4455555543 568999999999999976                   9999999999999999998765432  


Q ss_pred             CCCcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccC-CCCcHHHH
Q 039021          266 PNQENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQI-SRCPNRLK  337 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~  337 (464)
                      ....||+.|+|||++.     ...++.++|||||||++|+|++|+.||....  .+..........+..+. ..+++++.
T Consensus       182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  261 (318)
T 2dyl_A          182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQ  261 (318)
T ss_dssp             -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHH
T ss_pred             cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHH
Confidence            2345999999999984     4678899999999999999999999998743  23333333332333322 45799999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +||.+||+.||.+|||+.++++|.+.
T Consensus       262 ~li~~~l~~dp~~Rps~~~ll~h~~~  287 (318)
T 2dyl_A          262 SFVKDCLTKDHRKRPKYNKLLEHSFI  287 (318)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred             HHHHHHccCChhHCcCHHHHhhCHHH
Confidence            99999999999999999999998654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1e-36  Score=296.40  Aligned_cols=226  Identities=15%  Similarity=0.180  Sum_probs=185.8

Q ss_pred             cccccccccccceeeeeEEeEE---eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc------eeeeeceeeeC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW---RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN------ILQFLGSIVLG  201 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn------Iv~~~~~~~~~  201 (464)
                      .+|++.+.||+|+||.||+|.+   .++.||+|+++..    ....+.+.+| .+++.++|+|      |+++++++.+.
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence            4799999999999999999998   3789999999753    3445667788 8888886654      99999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccC---------------
Q 039021          202 EEMILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDE---------------  246 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~---------------  246 (464)
                      +..++||||+ +++|.+++...+  ++++..+..++.|+++                  |||++.               
T Consensus        90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            9999999999 789999997754  6899999999999987                  999987               


Q ss_pred             ----CCceeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhcccc-
Q 039021          247 ----GDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKS-  320 (464)
Q Consensus       247 ----~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~-  320 (464)
                          ++.+||+|||+++..........||+.|+|||++.+..++.++|||||||++|||++|..||...+.. ...... 
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  248 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER  248 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHH
T ss_pred             ccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence                66799999999988776666677999999999999999999999999999999999999999876521 111000 


Q ss_pred             -ccCCC----------------------------------------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHH
Q 039021          321 -VNFEP----------------------------------------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVII  359 (464)
Q Consensus       321 -~~~~~----------------------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~  359 (464)
                       ....+                                        .......++++.+||.+||+.||.+|||+.|+++
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence             00000                                        0011224678999999999999999999999998


Q ss_pred             HHH
Q 039021          360 TLE  362 (464)
Q Consensus       360 ~l~  362 (464)
                      |.+
T Consensus       329 hp~  331 (339)
T 1z57_A          329 HPF  331 (339)
T ss_dssp             SGG
T ss_pred             CHH
Confidence            854

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=4e-36  Score=294.54  Aligned_cols=227  Identities=17%  Similarity=0.215  Sum_probs=182.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc-----
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE-----  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~-----  203 (464)
                      .+|.+.+.||+|+||.||+|.++  |+.||+|++..... .......+.+| .++++++||||+++++++...+.     
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            36999999999999999999984  88999999976432 24455678888 99999999999999999987654     


Q ss_pred             -eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 -MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 -~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                       +++||||+. |+|.+++..  .+++..+..++.||+.                  |||++.++.+||+|||+++.....
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  179 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  179 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred             eEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence             499999998 599888754  5999999999999986                  999999999999999999887665


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc----------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS----------------------  320 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~----------------------  320 (464)
                      .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+. +....+.                      
T Consensus       180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  259 (353)
T 3coi_A          180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY  259 (353)
T ss_dssp             ----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHH
T ss_pred             ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHH
Confidence            556679999999999877 7789999999999999999999999987651 1111100                      


Q ss_pred             -----ccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 -----VNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 -----~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                           ......+  ....+++++.+||.+||+.||++|||+.++++|.+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  308 (353)
T 3coi_A          260 IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  308 (353)
T ss_dssp             HHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             HHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence                 0001111  11457899999999999999999999999999865

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.2e-36  Score=287.40  Aligned_cols=223  Identities=17%  Similarity=0.270  Sum_probs=176.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--------  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--------  200 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++...    ....+.+.+| .++++++||||+++++++.+        
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM   81 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence            36899999999999999999984  889999999753    4456678889 99999999999999998865        


Q ss_pred             -----CCceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecch
Q 039021          201 -----GEEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYW  256 (464)
Q Consensus       201 -----~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG  256 (464)
                           .+..++||||+++|+|.+++... ..+++..++.++.|+++                  |||++.++.+||+|||
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg  161 (303)
T 1zy4_A           82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG  161 (303)
T ss_dssp             ----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             cccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence                 35689999999999999999753 46888999999999986                  9999999999999999


Q ss_pred             hhhhhccc-----------------CCCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCc--cchh
Q 039021          257 VQMFYEQI-----------------HPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFM  316 (464)
Q Consensus       257 ~a~~~~~~-----------------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~  316 (464)
                      +++.....                 .....||+.|+|||++.+. .++.++|||||||++|+|++   ||....  ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~  238 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL  238 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHH
Confidence            99865421                 1233489999999999764 78999999999999999998   554332  1111


Q ss_pred             cccc---ccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          317 HLKS---VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       317 ~~~~---~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ....   ...++.+ ....++.+.+||.+||+.||++|||+.++++|.+
T Consensus       239 ~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  286 (303)
T 1zy4_A          239 KKLRSVSIEFPPDF-DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW  286 (303)
T ss_dssp             HHHHSTTCCCCTTC-CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred             HhccccccccCccc-cccchHHHHHHHHHHHhcCcccCcCHHHHhCCCC
Confidence            1111   1111222 2457889999999999999999999999998754

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=5e-36  Score=304.33  Aligned_cols=231  Identities=15%  Similarity=0.129  Sum_probs=188.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC-CceeeeeceeeeCCceEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH-PNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h-pnIv~~~~~~~~~~~~~lv  207 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||||++.....     ...+..| ++++.++| ++|..+..++.+.+..+||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv   81 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV   81 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence            46999999999999999999984  88999999876432     2357778 99999977 6677777777788889999


Q ss_pred             EEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcc---cCCCceeEecchhhhhhcccC
Q 039021          208 TEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQ---DEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill---~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||+ +++|.+++.. ...+++.+++.++.||+.                  |||+   +.++.+||+|||+++......
T Consensus        82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            9999 8899999975 568999999999999987                  9999   688999999999998766432


Q ss_pred             C----------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhccccc---cCCCCcc
Q 039021          266 P----------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKSV---NFEPKFQ  328 (464)
Q Consensus       266 ~----------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~~---~~~~~~~  328 (464)
                      .          ...||+.|+|||++.+..++.++|||||||++|||++|+.||.+....    ....+..   .......
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l  240 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL  240 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH
Confidence            2          445999999999999999999999999999999999999999875421    1111110   0011111


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      ...+|+++.+||.+||+.||++||++.+|++.|+.+....
T Consensus       241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            1568999999999999999999999999999998886543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.1e-36  Score=303.33  Aligned_cols=226  Identities=19%  Similarity=0.170  Sum_probs=178.9

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----  201 (464)
                      .+.+|++.+.||+|+||.||+|++.  |+.||+|++....       ....+| ++|++++|||||+++++|...     
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTT
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCc
Confidence            4557999999999999999999994  8899999997532       134468 999999999999999998642     


Q ss_pred             -CceEEEEEecCCCChHHHHh----hccCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchh
Q 039021          202 -EEMILITEYLPKGNLKGILS----KKVRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWV  257 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~  257 (464)
                       ..+++||||+++ +|.+.+.    ....+++..+..++.||++                  |||++.+ +.+||+|||+
T Consensus       125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchh
Confidence             236799999986 6766664    3468999999999999987                  9999965 5789999999


Q ss_pred             hhhhccc--CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--c---------
Q 039021          258 QMFYEQI--HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--N---------  322 (464)
Q Consensus       258 a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~---------  322 (464)
                      ++.....  .....||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.. .+.+..+..  +         
T Consensus       204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~  283 (420)
T 1j1b_A          204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE  283 (420)
T ss_dssp             CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            9876432  234469999999999876 479999999999999999999999998865 211111100  0         


Q ss_pred             -----CCCCc-----------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          323 -----FEPKF-----------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       323 -----~~~~~-----------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                           ....+           ....+++++.+||.+||+.||.+|||+.|+++|.+.
T Consensus       284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f  340 (420)
T 1j1b_A          284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF  340 (420)
T ss_dssp             HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhh
Confidence                 00000           013468999999999999999999999999998654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.2e-36  Score=291.41  Aligned_cols=222  Identities=16%  Similarity=0.146  Sum_probs=180.6

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeee--CCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVL--GEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~--~~~~~  205 (464)
                      .+|++.+.||+|+||.||+|++  .++.||+|+++...      ...+.+| .++++++ ||||+++++++.+  ....+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~  109 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  109 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence            4699999999999999999998  48899999998531      2467788 9999997 9999999999988  56789


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhcccC-
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~~-  265 (464)
                      +||||+++++|.+++.   .+++.++..++.|++.                  |||++.++ .+||+|||+++...... 
T Consensus       110 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~  186 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  186 (330)
T ss_dssp             EEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred             EEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence            9999999999999885   4899999999999987                  99999776 89999999998765332 


Q ss_pred             -CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhcccc------------cc-------
Q 039021          266 -PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKS------------VN-------  322 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~------------~~-------  322 (464)
                       ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....  .+......            ..       
T Consensus       187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  266 (330)
T 3nsz_A          187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP  266 (330)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred             cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence             34459999999999877 778999999999999999999999995432  11000000            00       


Q ss_pred             ----------------CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 ----------------FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 ----------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                      .........+++++.+||.+||+.||++|||+.++++|.+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~  322 (330)
T 3nsz_A          267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY  322 (330)
T ss_dssp             HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred             chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence                            0000011337899999999999999999999999999854

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.3e-36  Score=290.48  Aligned_cols=227  Identities=19%  Similarity=0.166  Sum_probs=177.8

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceee---------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV---------  199 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~---------  199 (464)
                      .+|++.+.||+|+||.||+|.+.  ++.||+|++...   .....+.+.+| .++++++||||+++++++.         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            36999999999999999999985  889999999853   34556778889 9999999999999999873         


Q ss_pred             -----eCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc-CCCceeEecc
Q 039021          200 -----LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD-EGDHLKIGEY  255 (464)
Q Consensus       200 -----~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~-~~~~~kl~DF  255 (464)
                           +.+..++||||++ |+|.+++.. +++++..++.++.|++.                  |||++ +++.+||+||
T Consensus        88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             ---CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             cccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence                 3467899999998 599999975 57999999999999987                  99997 5678999999


Q ss_pred             hhhhhhccc------CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC----
Q 039021          256 WVQMFYEQI------HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF----  323 (464)
Q Consensus       256 G~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~----  323 (464)
                      |+++.....      .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+... +.........    
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  245 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH  245 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence            999876422      122347999999998865 7789999999999999999999999987652 2111111000    


Q ss_pred             --------------------CCCc----cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 --------------------EPKF----QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 --------------------~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                          .+..    ....+++++.+||.+||+.||++|||+.++++|.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (320)
T 2i6l_A          246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM  309 (320)
T ss_dssp             HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred             hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence                                0000    114579999999999999999999999999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.5e-36  Score=292.92  Aligned_cols=226  Identities=19%  Similarity=0.144  Sum_probs=160.4

Q ss_pred             ccccccc-ccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee----CCc
Q 039021          132 LNTLHSS-MVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL----GEE  203 (464)
Q Consensus       132 ~~~~~~~-~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~----~~~  203 (464)
                      .+|.+.+ .||+|+||.||+|+++  ++.||+|++...    ..   ...+. ..++.++||||+++++++..    ...
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            3688754 6999999999999995  899999999753    11   12223 56778899999999999986    455


Q ss_pred             eEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccC---CCceeEecchhhhh
Q 039021          204 MILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDE---GDHLKIGEYWVQMF  260 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl~DFG~a~~  260 (464)
                      +++||||+++|+|.+++...  ..+++.+++.++.|++.                  |||++.   ++.+||+|||+++.
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            89999999999999999765  36999999999999987                  999976   45599999999986


Q ss_pred             hcccC-CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh----ccccccCCCCc---cCCCC
Q 039021          261 YEQIH-PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM----HLKSVNFEPKF---QISRC  332 (464)
Q Consensus       261 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~---~~~~~  332 (464)
                      ..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........    ..........+   ....+
T Consensus       181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (336)
T 3fhr_A          181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV  260 (336)
T ss_dssp             C----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTC
T ss_pred             ccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccC
Confidence            65332 344589999999999888899999999999999999999999977652211    11111111111   11468


Q ss_pred             cHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      ++++.+||.+||+.||++|||+.++++|.+..
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  292 (336)
T 3fhr_A          261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWIN  292 (336)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            99999999999999999999999999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=4.7e-36  Score=297.23  Aligned_cols=226  Identities=19%  Similarity=0.215  Sum_probs=182.3

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CC-----ceeeeeceeeeCC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HP-----NILQFLGSIVLGE  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hp-----nIv~~~~~~~~~~  202 (464)
                      .+|++.+.||+|+||+||+|++.  ++.||+|+++..    ......+..| .+++.++ |+     +|+++++++...+
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            47999999999999999999985  889999999853    3345566777 8888774 45     4999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh--------------------hhccc--CCCceeEecchhh
Q 039021          203 EMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR--------------------NLLQD--EGDHLKIGEYWVQ  258 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~--------------------Nill~--~~~~~kl~DFG~a  258 (464)
                      ..+|||||+.+ +|.+++...  ..+++..+..++.|++.                    |||++  .++.+||+|||+|
T Consensus       130 ~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          130 HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            99999999965 999999764  56999999999999986                    99995  4678999999999


Q ss_pred             hhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc--cCC-----------
Q 039021          259 MFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV--NFE-----------  324 (464)
Q Consensus       259 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~--~~~-----------  324 (464)
                      +..........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+ .+....+..  +.+           
T Consensus       209 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  288 (382)
T 2vx3_A          209 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA  288 (382)
T ss_dssp             EETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTH
T ss_pred             eecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHH
Confidence            988766666779999999999999999999999999999999999999998765 111111100  000           


Q ss_pred             ---------------------CCccCC----------------------------CCcHHHHHHHHHHcccCCCCCCCHH
Q 039021          325 ---------------------PKFQIS----------------------------RCPNRLKQLIAQCTNKDPSKRPTFA  355 (464)
Q Consensus       325 ---------------------~~~~~~----------------------------~~~~~~~~li~~cl~~dp~~Rpt~~  355 (464)
                                           ..+.++                            ..++++.+||.+||+.||++|||+.
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~  368 (382)
T 2vx3_A          289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPY  368 (382)
T ss_dssp             HHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             HHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHH
Confidence                                 000000                            0014789999999999999999999


Q ss_pred             HHHHHHH
Q 039021          356 AVIITLE  362 (464)
Q Consensus       356 ~i~~~l~  362 (464)
                      |+++|.+
T Consensus       369 e~L~hp~  375 (382)
T 2vx3_A          369 YALQHSF  375 (382)
T ss_dssp             HHTTSGG
T ss_pred             HHhcCcc
Confidence            9999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=6.3e-36  Score=289.60  Aligned_cols=233  Identities=18%  Similarity=0.203  Sum_probs=183.7

Q ss_pred             cccccccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc---CCCceeeeeceee-
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL---RHPNILQFLGSIV-  199 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l---~hpnIv~~~~~~~-  199 (464)
                      .....+|++.+.||+|+||.||+|++.   ++.||+|++....... .....+.+| .+++.+   +||||+++++++. 
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~   85 (326)
T 1blx_A            7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   85 (326)
T ss_dssp             CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence            344567999999999999999999983   7899999997543221 112234455 666555   8999999999987 


Q ss_pred             ----eCCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecc
Q 039021          200 ----LGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEY  255 (464)
Q Consensus       200 ----~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DF  255 (464)
                          .....++||||+. |+|.+++...  ..+++..+..++.|++.                  |||++.++.+||+||
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           86 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             EECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence                4567899999998 5999999764  35999999999999986                  999999999999999


Q ss_pred             hhhhhhccc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--c--------
Q 039021          256 WVQMFYEQI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--N--------  322 (464)
Q Consensus       256 G~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~--------  322 (464)
                      |+++.....  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+... .....+..  +        
T Consensus       165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (326)
T 1blx_A          165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  244 (326)
T ss_dssp             CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred             cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence            999876532  2345599999999999999999999999999999999999999987651 11111100  0        


Q ss_pred             ---------------CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 ---------------FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 ---------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                     .........+++.+.+||.+||+.||++|||+.++++|.+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  299 (326)
T 1blx_A          245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY  299 (326)
T ss_dssp             TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence                           0000011457899999999999999999999999998754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.4e-36  Score=296.70  Aligned_cols=227  Identities=19%  Similarity=0.140  Sum_probs=167.5

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc-----
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE-----  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~-----  203 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++......    ...+.++ +.++.++||||+++++++...+.     
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            47999999999999999999985  889999998754221    2244556 77888999999999999976443     


Q ss_pred             --eEEEEEecCCCChHHHH----hhccCCCHHHHHHHHHHHHh--------------------hhcccC-CCceeEecch
Q 039021          204 --MILITEYLPKGNLKGIL----SKKVRLDLPTALRYALDIAR--------------------NLLQDE-GDHLKIGEYW  256 (464)
Q Consensus       204 --~~lv~E~~~~g~L~~~l----~~~~~l~~~~~~~~~~qi~~--------------------Nill~~-~~~~kl~DFG  256 (464)
                        +++||||+++ +|.+.+    .....+++..+..++.|++.                    |||++. ++.+||+|||
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A           99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence              8899999987 554444    35578999999999999975                    999997 8999999999


Q ss_pred             hhhhhcccC--CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccc--cCC------
Q 039021          257 VQMFYEQIH--PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSV--NFE------  324 (464)
Q Consensus       257 ~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~--~~~------  324 (464)
                      +++......  ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+... .....+..  +.+      
T Consensus       178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  257 (360)
T 3e3p_A          178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR  257 (360)
T ss_dssp             TCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             CceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHH
Confidence            998776433  234589999999998664 489999999999999999999999987652 11111100  000      


Q ss_pred             ----------------CC------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          325 ----------------PK------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       325 ----------------~~------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                      ..      ......++++.+||.+||+.||.+|||+.++++|.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  318 (360)
T 3e3p_A          258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF  318 (360)
T ss_dssp             HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGG
T ss_pred             hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccc
Confidence                            00      0012257899999999999999999999999998654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.1e-36  Score=294.50  Aligned_cols=227  Identities=15%  Similarity=0.158  Sum_probs=188.5

Q ss_pred             ccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcC--CCceeeeeceeee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELR--HPNILQFLGSIVL  200 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~--hpnIv~~~~~~~~  200 (464)
                      ....+|++.+.||+|+||.||+|++  .++.||+|++........   .....+.+| .++++++  ||||+++++++.+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            3445799999999999999999998  488999999986532211   123456778 9999996  5999999999999


Q ss_pred             CCceEEEEEecCC-CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc-CCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPK-GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD-EGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~-g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~-~~~~~kl~DFG~a~~  260 (464)
                      .+..++||||+.+ ++|.+++...+.+++..++.++.|++.                  |||++ +++.+||+|||+++.
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~  199 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  199 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence            9999999999986 899999998889999999999999987                  99999 778999999999987


Q ss_pred             hcccC-CCCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHH
Q 039021          261 YEQIH-PNQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       261 ~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      ..... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||........      ....+ ...+++++.+
T Consensus       200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~------~~~~~-~~~~~~~~~~  272 (320)
T 3a99_A          200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR------GQVFF-RQRVSSECQH  272 (320)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH------CCCCC-SSCCCHHHHH
T ss_pred             cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhc------ccccc-cccCCHHHHH
Confidence            76433 33459999999999987666 6789999999999999999999976542111      11112 2568999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ||.+||+.||++|||+.++++|.+
T Consensus       273 li~~~l~~dp~~Rps~~~ll~hp~  296 (320)
T 3a99_A          273 LIRWCLALRPSDRPTFEEIQNHPW  296 (320)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHccCChhhCcCHHHHhcCHh
Confidence            999999999999999999998754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.8e-36  Score=297.11  Aligned_cols=226  Identities=19%  Similarity=0.193  Sum_probs=177.3

Q ss_pred             ccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc---
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE---  203 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~---  203 (464)
                      ....+|++.+.||+|+||.||+|++. +..||+|.+....       ....+| ++|+.++||||++++++|...+.   
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~-------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~  109 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD  109 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSS
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc-------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCC
Confidence            34557999999999999999999984 5568888876532       123468 99999999999999999965443   


Q ss_pred             ---eEEEEEecCCCChHHHHh----hccCCCHHHHHHHHHHHHh------------------hhccc-CCCceeEecchh
Q 039021          204 ---MILITEYLPKGNLKGILS----KKVRLDLPTALRYALDIAR------------------NLLQD-EGDHLKIGEYWV  257 (464)
Q Consensus       204 ---~~lv~E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~------------------Nill~-~~~~~kl~DFG~  257 (464)
                         +++||||+++ ++.+.+.    ....+++..+..++.||++                  |||++ .++.+||+|||+
T Consensus       110 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~  188 (394)
T 4e7w_A          110 EVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGS  188 (394)
T ss_dssp             CEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence               8899999987 4444432    3568999999999999987                  99999 789999999999


Q ss_pred             hhhhccc--CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc------------
Q 039021          258 QMFYEQI--HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV------------  321 (464)
Q Consensus       258 a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~------------  321 (464)
                      |+.....  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+ .+....+..            
T Consensus       189 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  268 (394)
T 4e7w_A          189 AKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT  268 (394)
T ss_dssp             CEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             cccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            9876433  334559999999999876 468999999999999999999999998866 111111100            


Q ss_pred             -------cCCCC--------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          322 -------NFEPK--------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       322 -------~~~~~--------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                             ...+.        .....+++++.+||.+||+.||.+|||+.++++|.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (394)
T 4e7w_A          269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF  324 (394)
T ss_dssp             HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChh
Confidence                   00000        001347899999999999999999999999999865

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=5.6e-36  Score=293.32  Aligned_cols=228  Identities=16%  Similarity=0.209  Sum_probs=184.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~  203 (464)
                      .+|.+.+.||+|+||.||+|++.  |+.||+|++...  ........+.+| .++++++||||+++++++...     ..
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            47999999999999999999985  889999999753  234455677788 999999999999999988764     67


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      .++||||+. |+|.+++.. +.+++..+..++.|++.                  |||++.++.+||+|||+++......
T Consensus        89 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA  166 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence            899999997 599999876 47999999999999987                  9999999999999999998754211


Q ss_pred             -------------CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhcccc--ccC-----
Q 039021          266 -------------PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKS--VNF-----  323 (464)
Q Consensus       266 -------------~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~--~~~-----  323 (464)
                                   ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.... ......  .+.     
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  246 (353)
T 2b9h_A          167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN  246 (353)
T ss_dssp             -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTT
T ss_pred             ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhc
Confidence                         12358999999998765 77899999999999999999999999876521 110000  000     


Q ss_pred             ----------------CCCc-------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          324 ----------------EPKF-------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       324 ----------------~~~~-------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                                      .+..       ....+++++.+||.+||+.||++|||+.++++|.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (353)
T 2b9h_A          247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL  309 (353)
T ss_dssp             TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence                            0000       014578999999999999999999999999998653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4e-36  Score=295.49  Aligned_cols=232  Identities=13%  Similarity=0.136  Sum_probs=178.3

Q ss_pred             cccccccccccccceeeeeEEeEEe-CceEEEEEeeccCC--------chHHHHHhHHHH-HHHHhcCCCceeeeeceee
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIY--------HPVKMVLSAKDN-CKLRELRHPNILQFLGSIV  199 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~  199 (464)
                      ...+|.+.+.||+|+||.||+|.+. |+.||+|++.....        ......+.+.+| +++++++||||+++++++.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            3347999999999999999999874 88999999965322        123345678889 9999999999999999995


Q ss_pred             eC-----CceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecc
Q 039021          200 LG-----EEMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEY  255 (464)
Q Consensus       200 ~~-----~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DF  255 (464)
                      ..     ..+++||||+. |+|.+++... ..+++..+..++.||+.                  |||++.++.+||+||
T Consensus       100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             ECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             eccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEec
Confidence            43     35899999998 5888888653 57999999999999987                  999999999999999


Q ss_pred             hhhhhhcccC--CCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc----------
Q 039021          256 WVQMFYEQIH--PNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV----------  321 (464)
Q Consensus       256 G~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~----------  321 (464)
                      |+++......  ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. ......+..          
T Consensus       179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  258 (362)
T 3pg1_A          179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV  258 (362)
T ss_dssp             TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHh
Confidence            9998655332  33459999999999877 778999999999999999999999998765 111111100          


Q ss_pred             -------------cCCCC-------ccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          322 -------------NFEPK-------FQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       322 -------------~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                   .....       .....+++.+.+||.+||+.||++|||+.++++|.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY  319 (362)
T ss_dssp             HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence                         00000       011456889999999999999999999999999865

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.9e-36  Score=299.97  Aligned_cols=226  Identities=17%  Similarity=0.147  Sum_probs=181.7

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC--------CCceeeeeceee-
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR--------HPNILQFLGSIV-  199 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~--------hpnIv~~~~~~~-  199 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++...    ....+.+.+| .+++.++        ||||+++++++. 
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            47999999999999999999984  889999999853    3445677788 8888885        888999999998 


Q ss_pred             ---eCCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh-------------------hhcccCCC-------
Q 039021          200 ---LGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR-------------------NLLQDEGD-------  248 (464)
Q Consensus       200 ---~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~-------------------Nill~~~~-------  248 (464)
                         +...+++||||+ +|+|.+++...  +.+++..++.++.||+.                   |||++.++       
T Consensus       113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence               456799999999 55777776543  57999999999999986                   99998775       


Q ss_pred             ------------------------------------------ceeEecchhhhhhcccCCCCcCCCCcccccccccCCCC
Q 039021          249 ------------------------------------------HLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDD  286 (464)
Q Consensus       249 ------------------------------------------~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~  286 (464)
                                                                .+||+|||+++..........||+.|+|||++.+..++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~  271 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN  271 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCC
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCC
Confidence                                                      79999999999887666667799999999999999999


Q ss_pred             CcccchhHHHHHHHHHhCCCCCCCCccch-------hccc--cccCCC---------------------Cc---------
Q 039021          287 TKKDICSFGYIFYQMLEGKHLQTNNSFDF-------MHLK--SVNFEP---------------------KF---------  327 (464)
Q Consensus       287 ~~~DvwSlGv~l~el~~g~~p~~~~~~~~-------~~~~--~~~~~~---------------------~~---------  327 (464)
                      .++|||||||++|||++|+.||.......       ....  ..+..+                     ..         
T Consensus       272 ~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (397)
T 1wak_A          272 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF  351 (397)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred             cHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchh
Confidence            99999999999999999999997644110       0000  000000                     00         


Q ss_pred             --------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 --------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 --------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                              .....++.+.+||.+||+.||++|||+.++++|.+
T Consensus       352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  394 (397)
T 1wak_A          352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW  394 (397)
T ss_dssp             HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGG
T ss_pred             HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcc
Confidence                    01223567899999999999999999999998854

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=5.2e-36  Score=293.44  Aligned_cols=227  Identities=16%  Similarity=0.194  Sum_probs=184.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--C-ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc------eeeeeceeee
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--G-TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN------ILQFLGSIVL  200 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~-~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn------Iv~~~~~~~~  200 (464)
                      ..+|++.+.||+|+||.||+|.+.  + +.||+|+++..    ......+.+| .++++++|++      ++.+++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            347999999999999999999984  4 68999999753    3445677788 8999887766      9999999999


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcc----------------
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQ----------------  244 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill----------------  244 (464)
                      .+..+|||||+ +|+|.+++...  ..+++.+++.++.||+.                  |||+                
T Consensus        94 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~  172 (355)
T 2eu9_A           94 HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE  172 (355)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred             CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccc
Confidence            99999999999 56887777654  47999999999999987                  9999                


Q ss_pred             ---cCCCceeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc
Q 039021          245 ---DEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS  320 (464)
Q Consensus       245 ---~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~  320 (464)
                         +.++.+||+|||+++..........||+.|+|||++.+..++.++|||||||++|||++|..||..... +......
T Consensus       173 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  252 (355)
T 2eu9_A          173 EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME  252 (355)
T ss_dssp             EEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence               567889999999998877666667799999999999999999999999999999999999999987652 1111100


Q ss_pred             --ccCCC----------------------------------------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHH
Q 039021          321 --VNFEP----------------------------------------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI  358 (464)
Q Consensus       321 --~~~~~----------------------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~  358 (464)
                        .+..+                                        .......++++.+||.+||+.||++|||+.+++
T Consensus       253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l  332 (355)
T 2eu9_A          253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL  332 (355)
T ss_dssp             HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence              00000                                        000122356899999999999999999999999


Q ss_pred             HHHH
Q 039021          359 ITLE  362 (464)
Q Consensus       359 ~~l~  362 (464)
                      +|.+
T Consensus       333 ~hp~  336 (355)
T 2eu9_A          333 LHPF  336 (355)
T ss_dssp             TSGG
T ss_pred             cChh
Confidence            8854

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-36  Score=289.41  Aligned_cols=227  Identities=17%  Similarity=0.203  Sum_probs=180.1

Q ss_pred             ccccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchH---HHHHhHHHH-HHHHhc----CCCceeeeecee
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLREL----RHPNILQFLGSI  198 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l----~hpnIv~~~~~~  198 (464)
                      ....+|++.+.||+|+||.||+|++  .++.||+|++........   .....+.+| .+++++    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3445799999999999999999998  488999999976533221   223445667 888888    899999999999


Q ss_pred             eeCCceEEEEEe-cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc-CCCceeEecchhh
Q 039021          199 VLGEEMILITEY-LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD-EGDHLKIGEYWVQ  258 (464)
Q Consensus       199 ~~~~~~~lv~E~-~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~-~~~~~kl~DFG~a  258 (464)
                      .+.+..++|||| +.+++|.+++..++.+++..++.++.|++.                  ||+++ .++.+||+|||++
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            999999999999 789999999998889999999999999987                  99999 7899999999999


Q ss_pred             hhhcccC-CCCcCCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHH
Q 039021          259 MFYEQIH-PNQENSQRNDNSSIASNVLDD-TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       259 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      +...... ....||+.|+|||++.+..+. .++||||||+++|+|++|+.||........      ....++ ..+++++
T Consensus       188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~-~~~~~~~  260 (312)
T 2iwi_A          188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE------AELHFP-AHVSPDC  260 (312)
T ss_dssp             EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH------TCCCCC-TTSCHHH
T ss_pred             hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh------hccCCc-ccCCHHH
Confidence            8765433 344599999999999876664 589999999999999999999976441110      112222 5589999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||.+||+.||++|||+.++++|.+
T Consensus       261 ~~li~~~l~~~p~~Rps~~e~l~~~~  286 (312)
T 2iwi_A          261 CALIRRCLAPKPSSRPSLEEILLDPW  286 (312)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred             HHHHHHHccCChhhCcCHHHHhcChh
Confidence            99999999999999999999998854

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.5e-36  Score=299.09  Aligned_cols=225  Identities=18%  Similarity=0.193  Sum_probs=165.8

Q ss_pred             cccc-ccccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCce
Q 039021          133 NTLH-SSMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEM  204 (464)
Q Consensus       133 ~~~~-~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~  204 (464)
                      .|.+ +++||+|+||.||+|+++    ++.||+|++......     ..+.+| .+|++++||||+++++++..  ...+
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   95 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKV   95 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence            3655 558999999999999974    778999999864322     356778 99999999999999999965  6789


Q ss_pred             EEEEEecCCCChHHHHhhc---------cCCCHHHHHHHHHHHHh------------------hhcc----cCCCceeEe
Q 039021          205 ILITEYLPKGNLKGILSKK---------VRLDLPTALRYALDIAR------------------NLLQ----DEGDHLKIG  253 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~---------~~l~~~~~~~~~~qi~~------------------Nill----~~~~~~kl~  253 (464)
                      +|||||+.+ +|.+++...         ..+++..++.++.||+.                  |||+    +.++.+||+
T Consensus        96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~  174 (405)
T 3rgf_A           96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA  174 (405)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred             EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence            999999975 888888532         25999999999999987                  9999    677899999


Q ss_pred             cchhhhhhccc------CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccch----------h
Q 039021          254 EYWVQMFYEQI------HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF----------M  316 (464)
Q Consensus       254 DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~----------~  316 (464)
                      |||+|+.....      .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.....          +
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l  254 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL  254 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence            99999876532      123458999999999987 458999999999999999999999997543210          0


Q ss_pred             cccc--ccCCC-----------------------Ccc-----------CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          317 HLKS--VNFEP-----------------------KFQ-----------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       317 ~~~~--~~~~~-----------------------~~~-----------~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ..+.  .+.+.                       .+.           ....++++.+||.+||+.||.+|||+.|+++|
T Consensus       255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000  00000                       000           01126788999999999999999999999999


Q ss_pred             HHH
Q 039021          361 LEE  363 (464)
Q Consensus       361 l~~  363 (464)
                      .+.
T Consensus       335 p~f  337 (405)
T 3rgf_A          335 PYF  337 (405)
T ss_dssp             GGG
T ss_pred             hhh
Confidence            764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=9.8e-36  Score=293.76  Aligned_cols=227  Identities=15%  Similarity=0.185  Sum_probs=180.9

Q ss_pred             ccccccccccccceeeeeEEeEE--eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-----------CCceeeeec
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-----------HPNILQFLG  196 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-----------hpnIv~~~~  196 (464)
                      ..+|++.+.||+|+||.||+|++  .++.||+|++...    ......+.+| .++++++           ||||+++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            34799999999999999999998  4889999999853    3344567778 8888776           899999999


Q ss_pred             eeeeCC----ceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh-------------------hhccc------
Q 039021          197 SIVLGE----EMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR-------------------NLLQD------  245 (464)
Q Consensus       197 ~~~~~~----~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~-------------------Nill~------  245 (464)
                      ++...+    .+++||||+ +++|.+++..  ...+++..+..++.||+.                   |||++      
T Consensus        94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred             HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence            998654    789999999 8899999976  356999999999999986                   99994      


Q ss_pred             CCCceeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-------hhcc
Q 039021          246 EGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-------FMHL  318 (464)
Q Consensus       246 ~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-------~~~~  318 (464)
                      ..+.+||+|||+++..........||+.|+|||++.+..++.++|||||||++|||++|+.||......       ....
T Consensus       173 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  252 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  252 (373)
T ss_dssp             TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             CcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHH
Confidence            344799999999988876666677999999999999999999999999999999999999999864310       0000


Q ss_pred             cc--ccC---------------------------------------CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHH
Q 039021          319 KS--VNF---------------------------------------EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV  357 (464)
Q Consensus       319 ~~--~~~---------------------------------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i  357 (464)
                      ..  .+.                                       ...+ +..+++++.+||.+||+.||++|||+.++
T Consensus       253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~el  331 (373)
T 1q8y_A          253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF-SKDEAKEISDFLSPMLQLDPRKRADAGGL  331 (373)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCC-CHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccC-CcchHHHHHHHHHHHhccCccccCCHHHH
Confidence            00  000                                       0001 12356789999999999999999999999


Q ss_pred             HHHHHH
Q 039021          358 IITLEE  363 (464)
Q Consensus       358 ~~~l~~  363 (464)
                      ++|.+.
T Consensus       332 l~hp~f  337 (373)
T 1q8y_A          332 VNHPWL  337 (373)
T ss_dssp             HTCGGG
T ss_pred             hhChhh
Confidence            998653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=5e-34  Score=271.19  Aligned_cols=210  Identities=11%  Similarity=0.077  Sum_probs=173.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++...........+.+.+| .++++++||||+++++++.+.+..|+||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            46999999999999999999995  89999999987655555666788888 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      ||++|++|.++++..  ....++..++.|++.                  |||++.++.+||+++|              
T Consensus       111 e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~--------------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA--------------  174 (286)
T ss_dssp             ECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC--------------
T ss_pred             EecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc--------------
Confidence            999999999999653  466678899999986                  9999999999998553              


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhc---cccccCCCC--ccCCCCcHHHHHHHHHHc
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMH---LKSVNFEPK--FQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~---~~~~~~~~~--~~~~~~~~~~~~li~~cl  344 (464)
                         |++|       ++.++|||||||++|||++|+.||.+... ....   .......+.  .....+|+++.+||.+||
T Consensus       175 ---~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          175 ---TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSV  244 (286)
T ss_dssp             ---CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHH
T ss_pred             ---ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHc
Confidence               3443       68899999999999999999999988662 2111   111111111  112568999999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          345 NKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      +.||++| |+.++++.|+.+....
T Consensus       245 ~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          245 QGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             CTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             ccCCccC-CHHHHHHHHHHHhccC
Confidence            9999999 9999999999886433

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-35  Score=294.88  Aligned_cols=228  Identities=15%  Similarity=0.122  Sum_probs=173.3

Q ss_pred             ccccccccccccccccceeeee-EEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCc
Q 039021          127 FDISELNTLHSSMVEQGVFGES-QTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEE  203 (464)
Q Consensus       127 i~~~~~~~~~~~~lg~G~~g~V-~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~  203 (464)
                      +.+...+|.+.+.||+|+||+| |++..+++.||||++.....      ..+.+| .+|+++ +|||||++++++.+...
T Consensus        19 ~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~   92 (432)
T 3p23_A           19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQF   92 (432)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTE
T ss_pred             EEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCE
Confidence            3445567999999999999985 44555799999999975322      235678 999999 89999999999999999


Q ss_pred             eEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccC---C--CceeEecchhhh
Q 039021          204 MILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDE---G--DHLKIGEYWVQM  259 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~---~--~~~kl~DFG~a~  259 (464)
                      .|||||||. |+|.+++... ..+++.+++.++.||++                  |||++.   +  ..+||+|||+|+
T Consensus        93 ~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A           93 QYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred             EEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence            999999997 5999999764 34666677888899976                  999953   2  357899999998


Q ss_pred             hhccc------CCCCcCCCCcccccccc---cCCCCCcccchhHHHHHHHHHh-CCCCCCCCccchhccccccCCCC--c
Q 039021          260 FYEQI------HPNQENSQRNDNSSIAS---NVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFEPK--F  327 (464)
Q Consensus       260 ~~~~~------~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~--~  327 (464)
                      .....      .....||+.|+|||++.   ...++.++|||||||++|||++ |..||..................  .
T Consensus       172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~  251 (432)
T 3p23_A          172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLH  251 (432)
T ss_dssp             CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSC
T ss_pred             eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccC
Confidence            76532      22345999999999997   4567889999999999999999 99999765533222222111111  1


Q ss_pred             cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       328 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      +....+..+.+||.+||+.||++|||+.++++|.
T Consensus       252 ~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp  285 (432)
T 3p23_A          252 PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP  285 (432)
T ss_dssp             TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred             ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence            1133467789999999999999999999999874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=4.4e-35  Score=304.22  Aligned_cols=226  Identities=15%  Similarity=0.070  Sum_probs=179.4

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee------CCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL------GEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~------~~~  203 (464)
                      +|++.+.||+|+||.||+|.+.  |+.||+|++....  .....+.+.+| +++++++||||+++++++..      .+.
T Consensus        15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            6899999999999999999984  8899999997642  24456778889 99999999999999998765      677


Q ss_pred             eEEEEEecCCCChHHHHhhcc---CCCHHHHHHHHHHHHh------------------hhcccCCCc---eeEecchhhh
Q 039021          204 MILITEYLPKGNLKGILSKKV---RLDLPTALRYALDIAR------------------NLLQDEGDH---LKIGEYWVQM  259 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~------------------Nill~~~~~---~kl~DFG~a~  259 (464)
                      .++||||++||+|.+++....   .+++..++.++.|++.                  |||++.++.   +||+|||+++
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence            899999999999999997643   6999999999999987                  999987765   9999999998


Q ss_pred             hhcccC--CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc--c------------hhccccccC
Q 039021          260 FYEQIH--PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF--D------------FMHLKSVNF  323 (464)
Q Consensus       260 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~--~------------~~~~~~~~~  323 (464)
                      ......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.....  .            .........
T Consensus       173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g  252 (676)
T 3qa8_A          173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG  252 (676)
T ss_dssp             BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSS
T ss_pred             ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcc
Confidence            876433  334599999999999999999999999999999999999999975420  0            000000000


Q ss_pred             ------C---CCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          324 ------E---PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       324 ------~---~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                            .   +......+++.+.+||.+||..||++|||+.++++|
T Consensus       253 ~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h  298 (676)
T 3qa8_A          253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV  298 (676)
T ss_dssp             SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC
T ss_pred             ccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC
Confidence                  0   000113368899999999999999999999997765

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=5.1e-35  Score=294.42  Aligned_cols=223  Identities=19%  Similarity=0.162  Sum_probs=167.1

Q ss_pred             ccccccccccceeeeeEEeEE-eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|.+.+.||+|+||+||.+.. +|+.||||++....      .+.+.+| .+|+++ +|||||++++++.+.+.+|||||
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            356678999999999976543 69999999997531      2356678 888876 89999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCC-------CHHHHHHHHHHHHh------------------hhcccCC-------------Ccee
Q 039021          210 YLPKGNLKGILSKKVRL-------DLPTALRYALDIAR------------------NLLQDEG-------------DHLK  251 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l-------~~~~~~~~~~qi~~------------------Nill~~~-------------~~~k  251 (464)
                      ||. |+|.+++......       ++..++.++.||+.                  |||++.+             +.+|
T Consensus        90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence            996 5999999765332       23345678888876                  9999754             4799


Q ss_pred             EecchhhhhhcccC-------CCCcCCCCccccccccc-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCccchh
Q 039021          252 IGEYWVQMFYEQIH-------PNQENSQRNDNSSIASN-------VLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFM  316 (464)
Q Consensus       252 l~DFG~a~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~~~~~  316 (464)
                      |+|||+++......       ....||+.|+|||++.+       ..++.++|||||||++|||++ |..||........
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~  248 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES  248 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence            99999998765422       13359999999999975       678899999999999999999 9999976542211


Q ss_pred             ccccccCC-C---CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          317 HLKSVNFE-P---KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       317 ~~~~~~~~-~---~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ........ +   ......+++++.+||.+||+.||.+|||+.++++|.+
T Consensus       249 ~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~  298 (434)
T 2rio_A          249 NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL  298 (434)
T ss_dssp             HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence            11111101 1   1111235789999999999999999999999998743

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.9e-33  Score=269.01  Aligned_cols=205  Identities=17%  Similarity=0.151  Sum_probs=163.8

Q ss_pred             ccccc-cccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHH-HhcCCCceeeeeceeee----CCc
Q 039021          133 NTLHS-SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKL-RELRHPNILQFLGSIVL----GEE  203 (464)
Q Consensus       133 ~~~~~-~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l-~~l~hpnIv~~~~~~~~----~~~  203 (464)
                      +|.+. +.||+|+||.||+|.+.  ++.||+|++...        ..+.+| .++ +.++||||+++++++..    ...
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            56666 78999999999999984  889999999752        245566 665 66799999999999987    677


Q ss_pred             eEEEEEecCCCChHHHHhhcc--CCCHHHHHHHHHHHHh------------------hhcccC---CCceeEecchhhhh
Q 039021          204 MILITEYLPKGNLKGILSKKV--RLDLPTALRYALDIAR------------------NLLQDE---GDHLKIGEYWVQMF  260 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl~DFG~a~~  260 (464)
                      +++||||+++|+|.+++....  .+++..++.++.|++.                  |||++.   ++.+||+|||+++.
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence            999999999999999998753  6999999999999987                  999998   78899999998864


Q ss_pred             hcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh----ccccccCCCCccC---CCCc
Q 039021          261 YEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM----HLKSVNFEPKFQI---SRCP  333 (464)
Q Consensus       261 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~---~~~~  333 (464)
                      ..                   +..++.++|||||||++|||++|..||........    ..........++.   ..++
T Consensus       170 ~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (299)
T 3m2w_A          170 TT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS  230 (299)
T ss_dssp             CT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSC
T ss_pred             cc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCC
Confidence            32                   34577899999999999999999999977652111    1111111111111   4589


Q ss_pred             HHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       334 ~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +++.+||.+||+.||++|||+.++++|.+..
T Consensus       231 ~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence            9999999999999999999999999997754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.6e-34  Score=300.87  Aligned_cols=220  Identities=18%  Similarity=0.157  Sum_probs=176.6

Q ss_pred             cccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc----
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE----  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~----  203 (464)
                      .+|++.+.||+|+||.||+|.++   ++.||+|++...  ........+.+| .+|++++||||+++++++...+.    
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            47999999999999999999984   789999998754  224455678889 99999999999999999988665    


Q ss_pred             -eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 -MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 -~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                       .||||||++|++|.+++..  .+++.+++.++.||++                  |||++.+ .+||+|||+++.....
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             EEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred             eeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence             7999999999999988765  7999999999999987                  9999875 8999999999877544


Q ss_pred             CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          265 HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                       ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.+......       ....+....++.+.+||.+||
T Consensus       235 -~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l  305 (681)
T 2pzi_A          235 -GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------PEDDPVLKTYDSYGRLLRRAI  305 (681)
T ss_dssp             -SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-------CTTCHHHHHCHHHHHHHHHHT
T ss_pred             -CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc-------cccccccccCHHHHHHHhhhc
Confidence             4456999999999987654 8899999999999999999988876431111       111111224688999999999


Q ss_pred             ccCCCCCCC-HHHHHHHHHHHH
Q 039021          345 NKDPSKRPT-FAAVIITLEEVS  365 (464)
Q Consensus       345 ~~dp~~Rpt-~~~i~~~l~~~~  365 (464)
                      +.||++||+ +.++...|..+.
T Consensus       306 ~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          306 DPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             CSSGGGSCSSHHHHHHHHHHHH
T ss_pred             cCChhhCCCHHHHHHHHHHHHH
Confidence            999999996 455555565553

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=3.4e-33  Score=279.37  Aligned_cols=222  Identities=13%  Similarity=0.019  Sum_probs=170.1

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC-Cceeeee------------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH-PNILQFL------------  195 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h-pnIv~~~------------  195 (464)
                      ..|...+.||+|+||+||+|++.  |+.||||++...........+.+.+| .+++.++| +|+..++            
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            45788899999999999999985  99999999985443334446678888 88999977 3221111            


Q ss_pred             ---------ceeee-----CCceEEEEEecCCCChHHHHhh-------ccCCCHHHHHHHHHHHHh--------------
Q 039021          196 ---------GSIVL-----GEEMILITEYLPKGNLKGILSK-------KVRLDLPTALRYALDIAR--------------  240 (464)
Q Consensus       196 ---------~~~~~-----~~~~~lv~E~~~~g~L~~~l~~-------~~~l~~~~~~~~~~qi~~--------------  240 (464)
                               .++..     ...++++|+++ +++|.++++.       ...+++..++.++.|+++              
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD  236 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  236 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence                     11111     22467778766 5799999841       345788899999999987              


Q ss_pred             ----hhcccCCCceeEecchhhhhhcccCCCCcCCCCccccccc----------ccCCCCCcccchhHHHHHHHHHhCCC
Q 039021          241 ----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIA----------SNVLDDTKKDICSFGYIFYQMLEGKH  306 (464)
Q Consensus       241 ----Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGv~l~el~~g~~  306 (464)
                          |||++.++.+||+|||+++..........| +.|+|||++          .+..++.++|||||||++|||++|+.
T Consensus       237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~  315 (413)
T 3dzo_A          237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL  315 (413)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence                999999999999999999887766666678 999999999          55668889999999999999999999


Q ss_pred             CCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHH
Q 039021          307 LQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT  360 (464)
Q Consensus       307 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~  360 (464)
                      ||..............     ....+|+++.+||.+||+.||++|||+.+++++
T Consensus       316 Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          316 PNTDDAALGGSEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             CCCTTGGGSCSGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CCCCcchhhhHHHHHh-----hcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            9987663222111111     113578999999999999999999999998876

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=1e-33  Score=275.45  Aligned_cols=223  Identities=13%  Similarity=0.042  Sum_probs=169.9

Q ss_pred             ccccccccccccceeeeeEEeEEeCceEEEEEeeccCCc-----hHHHHHhHHHH-HHHHhcC-----------------
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYH-----PVKMVLSAKDN-CKLRELR-----------------  187 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e-~~l~~l~-----------------  187 (464)
                      ..+|++.+.||+|+||+||+|+++|+.||+|++......     .....+.+.+| .+|+.++                 
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            357999999999999999999999999999999865321     12223567788 8888886                 


Q ss_pred             ---------CCceeeeeceeee-------------CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-----
Q 039021          188 ---------HPNILQFLGSIVL-------------GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-----  240 (464)
Q Consensus       188 ---------hpnIv~~~~~~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-----  240 (464)
                               ||||++++++|.+             .+.+|||||||++|++.+.+.+ +.+++.+++.++.||+.     
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHH
Confidence                     4555555555554             6789999999999987777654 57899999999999985     


Q ss_pred             --------------hhcccCCC--------------------ceeEecchhhhhhcccCCCCcCCCCcccccccccCCCC
Q 039021          241 --------------NLLQDEGD--------------------HLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDD  286 (464)
Q Consensus       241 --------------Nill~~~~--------------------~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~  286 (464)
                                    |||++.++                    .+||+|||+|+.....  ...||+.|+|||++.+.. +
T Consensus       178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~g~~-~  254 (336)
T 2vuw_A          178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFTGDG-D  254 (336)
T ss_dssp             HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGCCCS-S
T ss_pred             HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhcCCC-c
Confidence                          99999887                    8999999999876532  346999999999998766 8


Q ss_pred             CcccchhHHHH-HHHHHhCCCCCCCCc-----c-chhccccccCCC-CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHH
Q 039021          287 TKKDICSFGYI-FYQMLEGKHLQTNNS-----F-DFMHLKSVNFEP-KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI  358 (464)
Q Consensus       287 ~~~DvwSlGv~-l~el~~g~~p~~~~~-----~-~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~  358 (464)
                      .++||||||++ .+++++|..||....     . ...........+ ......+++++.+||.+||+.|     |+.|++
T Consensus       255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          255 YQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             cceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            89999998777 777888999996532     0 111011111111 1111357899999999999976     999999


Q ss_pred             -HHHH
Q 039021          359 -ITLE  362 (464)
Q Consensus       359 -~~l~  362 (464)
                       +|.+
T Consensus       330 ~~Hp~  334 (336)
T 2vuw_A          330 CQHSL  334 (336)
T ss_dssp             HHCGG
T ss_pred             hcCCC
Confidence             7743

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.90  E-value=1.4e-24  Score=224.74  Aligned_cols=166  Identities=13%  Similarity=-0.017  Sum_probs=114.2

Q ss_pred             cccccceeeeeEEeEE--eCceEEEEEeeccCCc-------hHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          138 SMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYH-------PVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~-------~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      ...+.|++|.+..++.  -|+.|++|++......       .+...+++.+| ++|+++ .|+||+++++++++++.+||
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            3466788887777765  4999999999865321       23345678999 999999 79999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---  265 (464)
                      |||||+||+|.++|...+++++.+   |+.||+.                  |||++++|.+||+|||+|+......   
T Consensus       320 VMEyv~G~~L~d~i~~~~~l~~~~---I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~  396 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGEEIDREK---ILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP  396 (569)
T ss_dssp             EEECCCSEEHHHHHHTTCCCCHHH---HHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred             EEecCCCCcHHHHHHhCCCCCHHH---HHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence            999999999999999988888764   6778876                  9999999999999999998765432   


Q ss_pred             CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC
Q 039021          266 PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL  307 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p  307 (464)
                      .+.+||+.|||||++.+. +..++|+||+|+++|+|.++..|
T Consensus       397 ~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             HHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             cCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence            233499999999999764 56789999999999888766443

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.87  E-value=5.4e-22  Score=172.65  Aligned_cols=109  Identities=30%  Similarity=0.420  Sum_probs=84.8

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .|++.+..|.+|.||||+|+..++.++++.|++.|+|+|.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|.|
T Consensus        26 ~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~T  105 (169)
T 4gpm_A           26 NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRT  105 (169)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCC
Confidence            35667777777888888888888888888888888888888888888888888888888888888888888877878888


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus       106 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~  134 (169)
T 4gpm_A          106 PLHHAAENGHKEVVKLLISKGADVNTSDS  134 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence            88888888888888888877776655544

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.86  E-value=1.9e-21  Score=151.51  Aligned_cols=93  Identities=34%  Similarity=0.443  Sum_probs=89.2

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCc
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH   93 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~   93 (464)
                      +|+||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhcccCc
Q 039021           94 RDICRILEVNGGK  106 (464)
Q Consensus        94 ~~iv~~L~~~g~~  106 (464)
                      .+++++|+++|++
T Consensus        81 ~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           81 LEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999999873

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.85  E-value=5.9e-21  Score=166.06  Aligned_cols=105  Identities=31%  Similarity=0.403  Sum_probs=96.8

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      -+++.+..|.+|.||||+|+..|+.++++.||++|+|+|.+|.+|+||||+|+..|+.++|++|+++|++++.+|..|.|
T Consensus        59 ~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~T  138 (169)
T 4gpm_A           59 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRT  138 (169)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            35677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      |||+|+..|+.+++++|+++|++..
T Consensus       139 pL~~A~~~g~~~iv~~Ll~~GA~ie  163 (169)
T 4gpm_A          139 PLDLAREHGNEEVVKLLEKQGGWLE  163 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHTC-----
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCcC
Confidence            9999999999999999999999653

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.85  E-value=4e-22  Score=205.12  Aligned_cols=165  Identities=11%  Similarity=0.017  Sum_probs=127.7

Q ss_pred             ccccccccceeeeeEEeEEeCceEEEEEeeccCCch-----HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          135 LHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHP-----VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ...+.||+|+||+||+|.+.++.+++|.........     ....+.+.+| ++|++++||||+++..++...+..||||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            345699999999999998889999999876543322     1234567899 9999999999996666666778889999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-----
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-----  265 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-----  265 (464)
                      ||++||+|.+++..        +..++.|+++                  |||++.  .+||+|||+|+......     
T Consensus       419 E~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~  488 (540)
T 3en9_A          419 SYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVD  488 (540)
T ss_dssp             ECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHH
T ss_pred             ECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccc
Confidence            99999999999976        4567777765                  999998  99999999998775421     


Q ss_pred             -----CCCcCCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCC
Q 039021          266 -----PNQENSQRNDNSSIASN--VLDDTKKDICSFGYIFYQMLEGKHLQT  309 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~el~~g~~p~~  309 (464)
                           ....||+.|||||++..  ..|+..+|+||..+-..+.+.++.+|.
T Consensus       489 ~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          489 LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence                 23459999999999987  678888999999999998888776663

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.81  E-value=9.6e-20  Score=152.58  Aligned_cols=103  Identities=32%  Similarity=0.380  Sum_probs=99.0

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      ..|.+|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~   84 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA   84 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence            77899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchHHHHHHhcccCccccccC
Q 039021           90 LYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ..|+.+++++|+++|++.+..+.
T Consensus        85 ~~~~~~~v~~Ll~~ga~~~~~~~  107 (137)
T 3c5r_A           85 KNGHVDIVKLLLSYGASRNAVNI  107 (137)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HcCCHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999998766554

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.81  E-value=7e-20  Score=148.49  Aligned_cols=103  Identities=29%  Similarity=0.365  Sum_probs=98.6

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      -.|.+|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~   83 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK   83 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchHHHHHHhcccCccccccC
Q 039021           90 LYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ..++.+++++|+++|++.+..+.
T Consensus        84 ~~~~~~~~~~Ll~~ga~~n~~~~  106 (115)
T 2l6b_A           84 KNGHHEIVKLLDAKGADVNARSW  106 (115)
T ss_dssp             TTTCHHHHHHHHTTSSSHHHHSC
T ss_pred             HCCCHHHHHHHHHcCCCCCcCCc
Confidence            99999999999999998776654

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.80  E-value=2.2e-19  Score=150.19  Aligned_cols=102  Identities=29%  Similarity=0.364  Sum_probs=82.2

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHh
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL   90 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   90 (464)
                      ....|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~   89 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF   89 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence            34567788888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             cCchHHHHHHhcccCccccccC
Q 039021           91 YGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        91 ~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .|+.+++++|+++|++.+..+.
T Consensus        90 ~~~~~~v~~Ll~~g~~~~~~~~  111 (136)
T 2jab_A           90 IGHLEIAEVLLKHGADVNAQDK  111 (136)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCT
T ss_pred             cCCHHHHHHHHHcCCCCcCcCC
Confidence            8888888888888877655443

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.80  E-value=1e-19  Score=152.30  Aligned_cols=107  Identities=24%  Similarity=0.268  Sum_probs=100.3

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCC-CCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRW-QRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~t   83 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |.|
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t   80 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR   80 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence            45668889999999999999999999999999999999999999999999999 9999999999999999999999 999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus        81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~  109 (136)
T 1d9s_A           81 PVHDAAREGFLDTLVVLHRAGARLDVCDA  109 (136)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence            99999999999999999999987765544

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.80  E-value=2.4e-19  Score=147.25  Aligned_cols=102  Identities=25%  Similarity=0.326  Sum_probs=94.3

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHh
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL   90 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   90 (464)
                      .+..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus         3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~   82 (123)
T 3aaa_C            3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY   82 (123)
T ss_dssp             ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHhcccCccccccC
Q 039021           91 YGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        91 ~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .|+.+++++|+++|++.+..+.
T Consensus        83 ~~~~~~v~~Ll~~ga~~~~~~~  104 (123)
T 3aaa_C           83 EGHVSCVKLLLSKGADKTVKGP  104 (123)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCT
T ss_pred             cCCHHHHHHHHHcCCCCCCcCC
Confidence            9999999999999998765554

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.80  E-value=6.5e-20  Score=153.48  Aligned_cols=102  Identities=27%  Similarity=0.349  Sum_probs=97.7

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYD-KRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~-g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .+++.+..|..|.||||+|+. |+.++++.|+++|+++|.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        34 ~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~  112 (136)
T 1d9s_A           34 AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGR  112 (136)
T ss_dssp             TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSS
T ss_pred             cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence            356778889999999999999 9999999999999999999999 99999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCchHHHHHHhcccCc
Q 039021           83 TPLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      ||||+|+..++.+++++|+++|++
T Consensus       113 tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A          113 LPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999999999874

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.79  E-value=6.7e-19  Score=152.25  Aligned_cols=109  Identities=25%  Similarity=0.362  Sum_probs=102.2

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+...+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        31 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  110 (165)
T 3twr_A           31 QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT  110 (165)
T ss_dssp             TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCC
Confidence            34455778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus       111 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  139 (165)
T 3twr_A          111 PLHEAAAKGKYEICKLLLQHGADPTKKNR  139 (165)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence            99999999999999999999998766654

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.79  E-value=5.4e-19  Score=155.13  Aligned_cols=108  Identities=29%  Similarity=0.364  Sum_probs=102.5

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +.+.+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~  108 (179)
T 3f6q_A           29 ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP  108 (179)
T ss_dssp             TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence            45678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++.+..+.
T Consensus       109 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  136 (179)
T 3f6q_A          109 LHYACFWGQDQVAEDLVANGALVSICNK  136 (179)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence            9999999999999999999998766554

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.78  E-value=5.2e-19  Score=142.25  Aligned_cols=94  Identities=26%  Similarity=0.405  Sum_probs=86.6

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      -....|.+|.|+||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus        16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~   95 (110)
T 2zgd_A           16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD   95 (110)
T ss_dssp             ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence            34678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHH
Q 039021           87 DARLYGHRDICRIL  100 (464)
Q Consensus        87 ~A~~~g~~~iv~~L  100 (464)
                      +|+..|+.+++++|
T Consensus        96 ~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           96 ISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHh
Confidence            99999999999987

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.78  E-value=1.4e-19  Score=155.27  Aligned_cols=106  Identities=26%  Similarity=0.331  Sum_probs=62.8

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCh-HhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t-~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      +++.+..|..|.||||+|+ .|+.++++.|+++|+++|.+|..|+| |||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        35 g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t  113 (156)
T 1bi7_B           35 GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRL  113 (156)
T ss_dssp             TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCC
T ss_pred             CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCC
Confidence            3445555666666666653 56666666666666666666666666 666666666666666666666666666666666


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      |||+|+..|+.+++++|+++|++.+..+
T Consensus       114 pl~~A~~~~~~~~v~~Ll~~ga~~~~~~  141 (156)
T 1bi7_B          114 PVDLAEELGHRDVARYLRAAAGGTRGSN  141 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHSSCC-------
T ss_pred             HHHHHHHhCHHHHHHHHHHcCCCCCccC
Confidence            6666666666666666666666554433

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.78  E-value=1.1e-18  Score=152.04  Aligned_cols=106  Identities=23%  Similarity=0.247  Sum_probs=99.8

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ..+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus        28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  107 (172)
T 3v30_A           28 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLL  107 (172)
T ss_dssp             GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred             cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence            35778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhcccCccccccC
Q 039021           87 DARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +|+..|+.+++++|+++|++.+..+.
T Consensus       108 ~A~~~~~~~~v~~Ll~~ga~~~~~~~  133 (172)
T 3v30_A          108 YAVRGNHVKCVEALLARGADLTTEAD  133 (172)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHcCCHHHHHHHHHcCCCccccCC
Confidence            99999999999999999987765544

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.78  E-value=1.6e-18  Score=150.68  Aligned_cols=109  Identities=31%  Similarity=0.341  Sum_probs=100.1

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        36 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t  115 (169)
T 2y1l_E           36 NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHT  115 (169)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence            35667788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus       116 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  144 (169)
T 2y1l_E          116 PLHLAAMFGHLEIVEVLLKNGADVNAQDK  144 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            99999999999999999999987655543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.78  E-value=1.4e-18  Score=148.34  Aligned_cols=103  Identities=32%  Similarity=0.356  Sum_probs=97.8

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      ..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus        29 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~  108 (153)
T 1awc_B           29 TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWAT  108 (153)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            46888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchHHHHHHhcccCccccccC
Q 039021           90 LYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ..|+.+++++|+++|++.+..+.
T Consensus       109 ~~~~~~~v~~Ll~~ga~~~~~~~  131 (153)
T 1awc_B          109 EHNHQEVVELLIKYGADVHTQSK  131 (153)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HcCCHHHHHHHHHcCCCccccCC
Confidence            99999999999999997765543

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.77  E-value=1.4e-18  Score=149.67  Aligned_cols=103  Identities=19%  Similarity=0.262  Sum_probs=91.4

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .++..+..|..|.||||+|+. |+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        27 ~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  105 (162)
T 1ihb_A           27 NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL  105 (162)
T ss_dssp             SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            456667788889999999888 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      |||+|+..|+.+++++|+++|++.
T Consensus       106 ~L~~A~~~~~~~~v~~Ll~~g~~~  129 (162)
T 1ihb_A          106 PLHLAAKEGHLRVVEFLVKHTASN  129 (162)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred             HHHHHHHcCCHHHHHHHHHccCCC
Confidence            999999999999999999888863

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.77  E-value=2e-18  Score=141.69  Aligned_cols=98  Identities=34%  Similarity=0.425  Sum_probs=54.7

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      .+..|..|.||||+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++
T Consensus        28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~  107 (126)
T 1n0r_A           28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL  107 (126)
T ss_dssp             TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            34445555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HHhcCchHHHHHHhcccC
Q 039021           88 ARLYGHRDICRILEVNGG  105 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~  105 (464)
                      |+..|+.+++++|+++|+
T Consensus       108 A~~~~~~~~~~~Ll~~Ga  125 (126)
T 1n0r_A          108 AARNGHLEVVKLLLEAGA  125 (126)
T ss_dssp             HHHTTCHHHHHHHHHHTC
T ss_pred             HHHcCcHHHHHHHHHcCC
Confidence            555555555555555554

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.77  E-value=2e-18  Score=149.55  Aligned_cols=108  Identities=24%  Similarity=0.291  Sum_probs=99.9

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ++..+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        26 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  105 (167)
T 3v31_A           26 ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP  105 (167)
T ss_dssp             SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred             CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCH
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++.+..+.
T Consensus       106 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  133 (167)
T 3v31_A          106 LLYAVHGNHVKCVKMLLESGADPTIETD  133 (167)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            9999999999999999999987765543

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.77  E-value=1.2e-18  Score=145.61  Aligned_cols=101  Identities=27%  Similarity=0.310  Sum_probs=96.0

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        36 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  115 (136)
T 2jab_A           36 NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKT  115 (136)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCC
Confidence            35667888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhccc
Q 039021           84 PLTDARLYGHRDICRILEVNG  104 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g  104 (464)
                      |||+|+..|+.+++++|+++|
T Consensus       116 pl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A          116 AFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHHHHHHTTCHHHHHHHHHC-
T ss_pred             HHHHHHHCCCHHHHHHHHHcC
Confidence            999999999999999999765

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.76  E-value=1.3e-18  Score=160.26  Aligned_cols=101  Identities=27%  Similarity=0.384  Sum_probs=65.4

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHh
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL   90 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   90 (464)
                      .+..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus        33 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~  112 (239)
T 1ycs_B           33 FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAAS  112 (239)
T ss_dssp             ----CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH
T ss_pred             cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            34556666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             cCchHHHHHHhcccCcccccc
Q 039021           91 YGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        91 ~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      .|+.+++++|+++|++.+..+
T Consensus       113 ~~~~~~v~~Ll~~ga~~~~~~  133 (239)
T 1ycs_B          113 CNNVQVCKFLVESGAAVFAMT  133 (239)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCC
T ss_pred             cCCHHHHHHHHHcCCCcceec
Confidence            666666666666666554433

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.76  E-value=3.1e-18  Score=152.05  Aligned_cols=107  Identities=22%  Similarity=0.229  Sum_probs=86.5

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        58 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  137 (192)
T 2rfm_A           58 FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETP  137 (192)
T ss_dssp             HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCH
T ss_pred             ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence            34556677778888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhcCchHHHHHHhcccCcccccc
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      ||+|+..|+.+++++|+++|++.+..+
T Consensus       138 L~~A~~~~~~~~v~~Ll~~ga~~~~~~  164 (192)
T 2rfm_A          138 LIVASKYGRSEIVKKLLELGADISARD  164 (192)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence            888888888888888888887665544

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.76  E-value=2e-18  Score=162.62  Aligned_cols=98  Identities=17%  Similarity=0.115  Sum_probs=94.2

Q ss_pred             CCCcccchHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021           10 DFDMQVIGNFLSFASR---GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~---g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ..|..|.||||+|+..   |+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus       164 ~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~  243 (278)
T 1dcq_A          164 NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLD  243 (278)
T ss_dssp             SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             ccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHH
Confidence            3478899999999999   8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhcccCcc
Q 039021           87 DARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      +|+..|+.+++++|+++|+..
T Consensus       244 ~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          244 IAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHcCCHHHHHHHHHcCCCC
Confidence            999999999999999999853

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.76  E-value=2.2e-18  Score=150.11  Aligned_cols=106  Identities=22%  Similarity=0.180  Sum_probs=100.4

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        59 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  138 (172)
T 3v30_A           59 GADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTP  138 (172)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence            56678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccc
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      ||+|+..|+.+++++|++++++....
T Consensus       139 l~~A~~~~~~~~~~~L~~~~~~~~~~  164 (172)
T 3v30_A          139 MDLAVALGYRKVQQVIENHILKLFQS  164 (172)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999865433

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.75  E-value=3.4e-18  Score=160.34  Aligned_cols=109  Identities=23%  Similarity=0.244  Sum_probs=80.5

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHH---------------------------------HHHcCCCCCCcCCCCCh
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQ---------------------------------MLREGTSPNVQDYDKRT   50 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~---------------------------------ll~~ga~~n~~d~~g~t   50 (464)
                      .|++.+..|.+|.||||+|+..|+.+++++                                 |++.|+++|.+|..|+|
T Consensus        75 ~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~T  154 (269)
T 4b93_B           75 SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNT  154 (269)
T ss_dssp             CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred             CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCC
Confidence            345556666666666666666665555554                                 45556677777778888


Q ss_pred             HhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           51 ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        51 ~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+||..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       155 pL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~  216 (269)
T 4b93_B          155 PLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK  216 (269)
T ss_dssp             HHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence            88888888888888888888888888888888888888888888888888888887666554

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.75  E-value=4e-18  Score=155.95  Aligned_cols=100  Identities=27%  Similarity=0.292  Sum_probs=66.1

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      ..+..|.|+||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus        16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~   95 (229)
T 2vge_A           16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA   95 (229)
T ss_dssp             CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            44455666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             hcCchHHHHHHhcccCcccc
Q 039021           90 LYGHRDICRILEVNGGKDFI  109 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~~~  109 (464)
                      ..|+.+++++|+++|++.+.
T Consensus        96 ~~g~~~~v~~Ll~~ga~~~~  115 (229)
T 2vge_A           96 SCNDTVICMALVQHGAAIFA  115 (229)
T ss_dssp             HTTCHHHHHHHHTTTCCTTC
T ss_pred             HcCCHHHHHHHHHcCCCccc
Confidence            66666666666666665443

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.75  E-value=4.8e-18  Score=145.36  Aligned_cols=105  Identities=22%  Similarity=0.260  Sum_probs=95.4

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      .+.+..|..|.||||+ +..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus        27 ~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  105 (156)
T 1bd8_A           27 VHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI  105 (156)
T ss_dssp             CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred             cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence            3667788899999999 889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHhcccCccccccC
Q 039021           86 TDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+|+..|+.+++++|+++ ++.+..+.
T Consensus       106 ~~A~~~~~~~~v~~Ll~~-~~~~~~~~  131 (156)
T 1bd8_A          106 HLAVQEGHTAVVSFLAAE-SDLHRRDA  131 (156)
T ss_dssp             HHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred             HHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence            999999999999999988 66555443

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.75  E-value=3.7e-18  Score=145.71  Aligned_cols=97  Identities=26%  Similarity=0.343  Sum_probs=93.2

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        56 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  135 (153)
T 1awc_B           56 AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT  135 (153)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            45667888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHH
Q 039021           84 PLTDARLYGHRDICRIL  100 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L  100 (464)
                      |+|+|+..|+.+++++|
T Consensus       136 ~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B          136 AFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHh
Confidence            99999999999999987

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.75  E-value=5.9e-18  Score=147.05  Aligned_cols=101  Identities=29%  Similarity=0.366  Sum_probs=96.0

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        69 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  148 (169)
T 2y1l_E           69 NGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKT  148 (169)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            35667888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhccc
Q 039021           84 PLTDARLYGHRDICRILEVNG  104 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g  104 (464)
                      |+++|+..|+.+++++|++.|
T Consensus       149 ~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          149 AFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHTC-
T ss_pred             HHHHHHHhCCHHHHHHHHHcC
Confidence            999999999999999999765

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.75  E-value=5.1e-18  Score=159.66  Aligned_cols=110  Identities=22%  Similarity=0.170  Sum_probs=100.3

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYD-KRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~-g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ...+..|..|.||||+|+..|+.++++.|+++|+++|.++.. |+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus       149 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tp  228 (282)
T 1oy3_D          149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP  228 (282)
T ss_dssp             GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             hcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCH
Confidence            346778899999999999999999999999999999999865 9999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccCCcc
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQPLT  115 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~p~~  115 (464)
                      ||+|+..|+.+++++|+++|++.+..+....
T Consensus       229 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  259 (282)
T 1oy3_D          229 LGSALLRPNPILARLLRAHGAPEPEDGGDKL  259 (282)
T ss_dssp             HHHHHTSSCHHHHHHHHHTTCCCCCCC----
T ss_pred             HHHHHHcCCcHHHHHHHHcCCCcCcCCCccc
Confidence            9999999999999999999998876665433

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.75  E-value=3.6e-18  Score=147.05  Aligned_cols=102  Identities=27%  Similarity=0.360  Sum_probs=89.6

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCC-cccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN-LNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t   83 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|
T Consensus        60 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t  139 (162)
T 1ihb_A           60 GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT  139 (162)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence            556677888899999999999999999999999999999999999999999999999999999999988 5888999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCc
Q 039021           84 PLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      |||+|+..|+.+++++|+++|++
T Consensus       140 ~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          140 ACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTC--
T ss_pred             HHHHHHHcCCHHHHHHHHHhCCC
Confidence            99999999999999999988873

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.74  E-value=3.5e-18  Score=147.76  Aligned_cols=100  Identities=30%  Similarity=0.276  Sum_probs=94.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        65 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  144 (165)
T 3twr_A           65 GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTP  144 (165)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred             CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCh
Confidence            56678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccC
Q 039021           85 LTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~  105 (464)
                      +|+|.. ++.+++++|+.+|+
T Consensus       145 l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          145 LDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             GGGSCT-TCHHHHHHHHTC--
T ss_pred             hHhHhc-CChHHHHHHhhccc
Confidence            999877 89999999998876

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.74  E-value=7.1e-18  Score=154.26  Aligned_cols=109  Identities=17%  Similarity=0.058  Sum_probs=102.7

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccccc-CCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD-RWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t   83 (464)
                      +++.+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|.|
T Consensus        44 g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t  123 (229)
T 2vge_A           44 MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT  123 (229)
T ss_dssp             SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCC
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCC
Confidence            56778899999999999999999999999999999999999999999999999999999999999999999986 69999


Q ss_pred             HHHHH--HhcCchHHHHHHhcccCccccccCC
Q 039021           84 PLTDA--RLYGHRDICRILEVNGGKDFIHDQP  113 (464)
Q Consensus        84 pl~~A--~~~g~~~iv~~L~~~g~~~~~~~~p  113 (464)
                      |||+|  +..|+.+++++|+++|++.+..+..
T Consensus       124 pL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~  155 (229)
T 2vge_A          124 AFEKCDPYREGYADCATYLADVEQSMGLMNSG  155 (229)
T ss_dssp             TGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGG
T ss_pred             HHHHHHHHhcChHHHHHHHHHcCCCcccccCC
Confidence            99999  9999999999999999988776653

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.74  E-value=6e-18  Score=158.65  Aligned_cols=105  Identities=25%  Similarity=0.245  Sum_probs=66.3

Q ss_pred             CCCCCcccchHHHHHHHcCCHH-HHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRV-GLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~-~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      .+..|..|.||||+|+..++.+ +++.|++.|+|+|.+|.+|+||||+|+..|+.+++++|++.|++++.++..|.||++
T Consensus        45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~  124 (269)
T 4b93_B           45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLH  124 (269)
T ss_dssp             ------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccc
Confidence            4567889999999999987764 788899999999999999999999999999999999999999888888888888888


Q ss_pred             HHHhcCchHHHHHHhcccCccccccC
Q 039021           87 DARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +|+..++.+++++|+++|++.+..+.
T Consensus       125 ~a~~~~~~~~~~~Ll~~g~~~n~~d~  150 (269)
T 4b93_B          125 LACQQGHFQVVKCLLDSNAKPNKKDL  150 (269)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred             cccccChHHHHHHHHHCCCCCCCCCC
Confidence            88888888888888888776655543

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.74  E-value=7.9e-18  Score=143.98  Aligned_cols=98  Identities=28%  Similarity=0.313  Sum_probs=85.0

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.||
T Consensus        58 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~  136 (156)
T 1bd8_A           58 GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTP  136 (156)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCH
T ss_pred             CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCH
Confidence            566677888888899998888888888888888888888888888999998888888888888888 8888888888889


Q ss_pred             HHHHHhcCchHHHHHHhcc
Q 039021           85 LTDARLYGHRDICRILEVN  103 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~  103 (464)
                      ||+|+..|+.+++++|+++
T Consensus       137 l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          137 LELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHcCcHHHHHHHHhh
Confidence            9888888888888888754

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.74  E-value=5.2e-18  Score=154.29  Aligned_cols=102  Identities=26%  Similarity=0.296  Sum_probs=96.9

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhcc-CCCcccccCCCCCHHHHHH
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~   89 (464)
                      .|..|.||||+||..|+.++++.|++.|+++|.+|..|+||||+||..|+.+++++|+++ |++++.+|..|.||||+|+
T Consensus        69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~  148 (222)
T 3ehr_A           69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA  148 (222)
T ss_dssp             HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred             cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence            356789999999999999999999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             hcCchHHHHHHhcccCccccccC
Q 039021           90 LYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ..|+.+++++|+++|++.+..+.
T Consensus       149 ~~~~~~~v~~Ll~~ga~~~~~~~  171 (222)
T 3ehr_A          149 WKGYADIVQLLLAKGARTDLRNI  171 (222)
T ss_dssp             HHTCHHHHHHHHHHTCCSCCCCT
T ss_pred             HcCCHHHHHHHHHcCCCCccccC
Confidence            99999999999999998776654

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.74  E-value=4.1e-18  Score=156.90  Aligned_cols=111  Identities=17%  Similarity=0.069  Sum_probs=103.4

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      ..+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        58 ~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~  137 (239)
T 1ycs_B           58 YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM  137 (239)
T ss_dssp             STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred             HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCC
Confidence            44667888999999999999999999999999999999999999999999999999999999999999999999998887


Q ss_pred             -CHHHHH--HhcCchHHHHHHhcccCccccccCC
Q 039021           83 -TPLTDA--RLYGHRDICRILEVNGGKDFIHDQP  113 (464)
Q Consensus        83 -tpl~~A--~~~g~~~iv~~L~~~g~~~~~~~~p  113 (464)
                       ||+|+|  +..|+.+++++|+.+|++....+..
T Consensus       138 ~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~  171 (239)
T 1ycs_B          138 QTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG  171 (239)
T ss_dssp             CCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred             cchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence             999999  7889999999999999987766554

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.74  E-value=4.5e-18  Score=149.22  Aligned_cols=106  Identities=17%  Similarity=0.098  Sum_probs=101.1

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        61 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  140 (179)
T 3f6q_A           61 RGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEM  140 (179)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCC
T ss_pred             cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCC
Confidence            35677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFI  109 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~  109 (464)
                      |+++|+..++.+++++|+++|++.+.
T Consensus       141 pl~~A~~~~~~~~~~~L~~~g~~~~~  166 (179)
T 3f6q_A          141 PVDKAKAPLRELLRERAEKMGQNLNR  166 (179)
T ss_dssp             GGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCccc
Confidence            99999999999999999999997654

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.74  E-value=8.3e-18  Score=149.22  Aligned_cols=100  Identities=20%  Similarity=0.238  Sum_probs=96.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        91 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  170 (192)
T 2rfm_A           91 GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA  170 (192)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBH
T ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH
Confidence            56678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhccc
Q 039021           85 LTDARLYGHRDICRILEVNG  104 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g  104 (464)
                      +|+|+..|+.+++++|++++
T Consensus       171 l~~A~~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          171 EASARIFGRQEVIKIFTEVR  190 (192)
T ss_dssp             HHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHhCcHHHHHHHHhcc
Confidence            99999999999999998765

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.74  E-value=3.2e-18  Score=140.40  Aligned_cols=92  Identities=22%  Similarity=0.106  Sum_probs=84.7

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        29 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  108 (123)
T 3aaa_C           29 KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLT  108 (123)
T ss_dssp             TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence            35667888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchH
Q 039021           84 PLTDARLYGHRD   95 (464)
Q Consensus        84 pl~~A~~~g~~~   95 (464)
                      |+|+|...+..+
T Consensus       109 ~l~~A~~~~~~~  120 (123)
T 3aaa_C          109 AFEATDNQAIKA  120 (123)
T ss_dssp             HHHHCCCHHHHH
T ss_pred             HHHHhCCHHHHH
Confidence            999995444333

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.74  E-value=4e-18  Score=150.22  Aligned_cols=102  Identities=26%  Similarity=0.276  Sum_probs=96.0

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccccc-CCCCCHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD-RWQRTPLTDA   88 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A   88 (464)
                      +.|.+|.||||+|+..|+.++++.|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|.||||+|
T Consensus        39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A  117 (183)
T 3deo_A           39 DVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA  117 (183)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence            346789999999999999999999999 99999999999999999999999999999999999999998 8999999999


Q ss_pred             HhcCchHHHHHHhcccCccccccC
Q 039021           89 RLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +..|+.+++++|+++|++.+..+.
T Consensus       118 ~~~~~~~~v~~Ll~~ga~~~~~d~  141 (183)
T 3deo_A          118 AGYVRPEVVEALVELGADIEVEDE  141 (183)
T ss_dssp             HHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred             HhcCcHHHHHHHHHcCCCCcCCCC
Confidence            999999999999999998765554

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.73  E-value=3.2e-18  Score=146.72  Aligned_cols=103  Identities=26%  Similarity=0.297  Sum_probs=94.3

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC-HHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT-PLTD   87 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~   87 (464)
                      +..+..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+ .|+.+++++|+++|++++.+|..|.| |||+
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~   84 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD   84 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence            456778999999999999999999999999999999999999999986 99999999999999999999999999 9999


Q ss_pred             HHhcCchHHHHHHhcccCccccccC
Q 039021           88 ARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+..|+.+++++|+++|++.+..+.
T Consensus        85 A~~~~~~~~v~~Ll~~ga~~~~~d~  109 (156)
T 1bi7_B           85 AAREGFLDTLVVLHRAGARLDVRDA  109 (156)
T ss_dssp             HHHHTCHHHHHHHHHHTCCSSCCCT
T ss_pred             HHHCCCHHHHHHHHHcCCCCcccCC
Confidence            9999999999999999998766553

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.73  E-value=1e-17  Score=157.82  Aligned_cols=100  Identities=27%  Similarity=0.237  Sum_probs=77.2

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhc-cCCCcccccCCCCCH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ-YKANLNLKDRWQRTP   84 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tp   84 (464)
                      +..+..|..|.||||+|+..|+.++++.|+++|+|+|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||
T Consensus       174 ~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~Tp  253 (276)
T 4hbd_A          174 NINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTA  253 (276)
T ss_dssp             CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCH
T ss_pred             CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCH
Confidence            4455566677788888888888888888888888888888888888888888888888888887 778887788888888


Q ss_pred             HHHHHhcCchHHHHHHhcccC
Q 039021           85 LTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~  105 (464)
                      ||+|+..|+.+++++|+++..
T Consensus       254 L~~A~~~g~~~iv~~Ll~~~~  274 (276)
T 4hbd_A          254 LMVALDAGQSEIASMLYSRMN  274 (276)
T ss_dssp             HHHHHHHTCHHHHHHHHHHCC
T ss_pred             HHHHHHcCCHHHHHHHHhccC
Confidence            888888888888887776543

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.73  E-value=1.5e-17  Score=136.34  Aligned_cols=98  Identities=34%  Similarity=0.425  Sum_probs=93.8

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCc
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH   93 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~   93 (464)
                      +|.||||+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhcccCcccccc
Q 039021           94 RDICRILEVNGGKDFIHD  111 (464)
Q Consensus        94 ~~iv~~L~~~g~~~~~~~  111 (464)
                      .+++++|+++|++.+..+
T Consensus        81 ~~~~~~Ll~~g~~~~~~~   98 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKD   98 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCC
T ss_pred             HHHHHHHHHcCCCCcccC
Confidence            999999999998765544

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.73  E-value=9.9e-18  Score=145.17  Aligned_cols=102  Identities=20%  Similarity=0.166  Sum_probs=98.0

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        59 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  138 (167)
T 3v31_A           59 GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNS  138 (167)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence            56678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCc
Q 039021           85 LTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      +|+|+..|+.+++++|++++.+
T Consensus       139 l~~A~~~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A          139 MDLAVALGYRSVQQVIESHLLK  160 (167)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCcHHHHHHHHHHHHH
Confidence            9999999999999999988764

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.72  E-value=1.1e-17  Score=159.51  Aligned_cols=105  Identities=21%  Similarity=0.155  Sum_probs=96.4

Q ss_pred             CCcccchHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021           11 FDMQVIGNFLSFASR---GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~---g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      .|..|.||||+|+..   |+.+++++||++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus       186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~  265 (301)
T 2b0o_E          186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI  265 (301)
T ss_dssp             SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred             cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            588999999999997   89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHhcccCccccccCCcccc
Q 039021           88 ARLYGHRDICRILEVNGGKDFIHDQPLTVR  117 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~~~~~~~~p~~~~  117 (464)
                      |+..|+.+++++|+++|++.  ...|+..+
T Consensus       266 A~~~~~~~iv~~Ll~~ga~~--g~tpLh~A  293 (301)
T 2b0o_E          266 ARKKHHKECEELLEQAQAGT--FAFPLHVD  293 (301)
T ss_dssp             HHHHTCHHHHHHHHHHHHHT--TSSCCC--
T ss_pred             HHHcCCHHHHHHHHHhcCCC--CCChhHHH
Confidence            99999999999999999863  34444433

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.72  E-value=2.1e-18  Score=152.40  Aligned_cols=100  Identities=9%  Similarity=0.083  Sum_probs=89.9

Q ss_pred             cccchHHHHHHHcCCH----HHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC------HHHHHHhhccCCCcccccCCCC
Q 039021           13 MQVIGNFLSFASRGDR----VGLNQMLREGTSPNVQDYDKRTALHLAASEGH------APIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus        13 ~~g~t~l~~a~~~g~~----~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~------~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      ..|+||||+|+..|+.    ++++.||++|+|+|.+|..|+||||+|+..|+      .+++++|+++|+++|.+|..|.
T Consensus        36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~  115 (186)
T 3t8k_A           36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK  115 (186)
T ss_dssp             HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred             cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence            6799999999999975    48999999999999999999999999999987      5789999999999999999999


Q ss_pred             -CHHHHHHhcC-----chHHHHHHhc-ccCccccccC
Q 039021           83 -TPLTDARLYG-----HRDICRILEV-NGGKDFIHDQ  112 (464)
Q Consensus        83 -tpl~~A~~~g-----~~~iv~~L~~-~g~~~~~~~~  112 (464)
                       ||||+|+..+     +.+++++|+. +|++.+..+.
T Consensus       116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~  152 (186)
T 3t8k_A          116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK  152 (186)
T ss_dssp             BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT
T ss_pred             chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC
Confidence             9999999854     3568999999 9998877665

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.72  E-value=2.9e-18  Score=143.47  Aligned_cols=102  Identities=22%  Similarity=0.247  Sum_probs=92.7

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        32 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  111 (137)
T 3c5r_A           32 NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLR  111 (137)
T ss_dssp             TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence            35677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccC
Q 039021           84 PLTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~  105 (464)
                      |+++|+..+..++++++...+.
T Consensus       112 pl~~A~~~~~~~~l~~l~~~~~  133 (137)
T 3c5r_A          112 PVDYTDDESMKSLLLLPEKNES  133 (137)
T ss_dssp             GGGGCCCHHHHHHHSCC-----
T ss_pred             HHHHHhhccHHHHHhhcccccc
Confidence            9999999999999888876554

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.72  E-value=2.7e-18  Score=151.69  Aligned_cols=103  Identities=15%  Similarity=0.099  Sum_probs=94.6

Q ss_pred             CccCCCCCCcccchHHHHHHHcCC------HHHHHHHHHcCCCCCCcCCCCC-hHhHHHHHcCC-----HHHHHHhhc-c
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGD------RVGLNQMLREGTSPNVQDYDKR-TALHLAASEGH-----APIVELLLQ-Y   70 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~------~~~~~~ll~~ga~~n~~d~~g~-t~lh~A~~~g~-----~~~v~~Ll~-~   70 (464)
                      -|++.+..|.+|+||||+|+..|+      .+++++|+++|+|+|.+|..|+ ||||+|+..+.     .+++++|++ +
T Consensus        64 ~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~  143 (186)
T 3t8k_A           64 KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS  143 (186)
T ss_dssp             TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST
T ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc
Confidence            478889999999999999999987      6889999999999999999999 99999999554     569999999 9


Q ss_pred             CCCcccccCCCCCHHHHHHhcCchHHHHHHhcccCc
Q 039021           71 KANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        71 ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      |++++.+|..|.||||+|+..|+.+++++|.....+
T Consensus       144 gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~  179 (186)
T 3t8k_A          144 GLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK  179 (186)
T ss_dssp             TCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999999876543

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.72  E-value=3.4e-17  Score=149.06  Aligned_cols=107  Identities=23%  Similarity=0.217  Sum_probs=92.5

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccC-CCcccccCCCCCH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK-ANLNLKDRWQRTP   84 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tp   84 (464)
                      ++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||
T Consensus        98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~  177 (228)
T 2dzn_A           98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP  177 (228)
T ss_dssp             CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCH
T ss_pred             cccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCH
Confidence            556777888889999999999999999999999999988888999999999999999999999888 8888888889999


Q ss_pred             HHHHHhcCchHHHHHHh-cccCccccccC
Q 039021           85 LTDARLYGHRDICRILE-VNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~-~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+ ++|++.+..+.
T Consensus       178 L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~  206 (228)
T 2dzn_A          178 LFHALAEGHGDAAVLLVEKYGAEYDLVDN  206 (228)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred             HHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence            99999999999999888 78887766554

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.72  E-value=7.7e-18  Score=155.62  Aligned_cols=102  Identities=26%  Similarity=0.276  Sum_probs=95.8

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccccc-CCCCCHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD-RWQRTPLTDA   88 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A   88 (464)
                      +.+.+|.||||+|+..|+.++++.||+ |+++|.+|..|+||||+||..|+.++|++|+++|++++.+| ..|.||||+|
T Consensus        40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A  118 (244)
T 3ui2_A           40 DVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA  118 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHH
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence            345689999999999999999999999 99999999999999999999999999999999999999998 8899999999


Q ss_pred             HhcCchHHHHHHhcccCccccccC
Q 039021           89 RLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +..|+.+++++|+.+|++.+..+.
T Consensus       119 ~~~g~~~~v~~Ll~~ga~~~~~d~  142 (244)
T 3ui2_A          119 AGYVRPEVVEALVELGADIEVEDE  142 (244)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHcCCHHHHHHHHHCCCCCCCCCC
Confidence            999999999999999998766554

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.71  E-value=1.6e-17  Score=154.30  Aligned_cols=104  Identities=19%  Similarity=0.126  Sum_probs=65.8

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ..+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus       116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~  195 (253)
T 1yyh_A          116 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF  195 (253)
T ss_dssp             CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence            34455556666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHhcCchHHHHHHhcccCccccc
Q 039021           87 DARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      +|+..|+.+++++|+++|++.+..
T Consensus       196 ~A~~~~~~~~v~~Ll~~ga~~~~~  219 (253)
T 1yyh_A          196 LAAREGSYETAKVLLDHFANRDIT  219 (253)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHCCCHHHHHHHHHcCCCcccc
Confidence            666666666666666666654443

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.71  E-value=6.7e-18  Score=153.53  Aligned_cols=109  Identities=18%  Similarity=0.148  Sum_probs=91.6

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~-ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|++. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        95 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  174 (222)
T 3ehr_A           95 NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKK  174 (222)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSC
T ss_pred             CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC
Confidence            3566788899999999999999999999999999 999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           83 TPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||||+|+..++.++++.++..++.....+.
T Consensus       175 t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~  204 (222)
T 3ehr_A          175 LAFDMATNAACASLLKKKQGTDAVRTLSNA  204 (222)
T ss_dssp             CHHHHCCSHHHHHHHC--------------
T ss_pred             CHHHHhcchhHHHHHHHHhccchhhhccch
Confidence            999999999999999999999987655444

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.71  E-value=4.2e-17  Score=148.01  Aligned_cols=106  Identities=20%  Similarity=0.142  Sum_probs=94.8

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ..+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus        84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  163 (223)
T 2f8y_A           84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF  163 (223)
T ss_dssp             CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHH
Confidence            55677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhcccCccccccC
Q 039021           87 DARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +|+..|+.+++++|+++|++.+..+.
T Consensus       164 ~A~~~~~~~~v~~Ll~~ga~~~~~~~  189 (223)
T 2f8y_A          164 LAAREGSYETAKVLLDHFANRDITDH  189 (223)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHcCCHHHHHHHHHcCCCCccccc
Confidence            99999999999999999887765544

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.71  E-value=2.9e-17  Score=150.70  Aligned_cols=109  Identities=23%  Similarity=0.219  Sum_probs=77.2

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccc
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTS------PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL   76 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~------~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~   76 (464)
                      .-+++.+..|..|.||||+|+..|+.++++.|++.|++      ++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus        66 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  145 (236)
T 1ikn_D           66 GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA  145 (236)
T ss_dssp             SCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred             HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            34556666777777777777777777777777777665      456666777777777777777777777777777777


Q ss_pred             ccC-CCCCHHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           77 KDR-WQRTPLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        77 ~d~-~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      +|. .|.||||+|+..|+.+++++|+++|++.+..+
T Consensus       146 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~  181 (236)
T 1ikn_D          146 QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT  181 (236)
T ss_dssp             CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence            776 77777777777777777777777777655444

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.71  E-value=5e-17  Score=157.71  Aligned_cols=108  Identities=25%  Similarity=0.288  Sum_probs=101.7

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+...+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        47 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t  126 (351)
T 3utm_A           47 LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFT  126 (351)
T ss_dssp             TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            45566788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      |||+|+..|+.+++++|+++|++....+
T Consensus       127 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  154 (351)
T 3utm_A          127 PLHEAASKNRVEVCSLLLSHGADPTLVN  154 (351)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence            9999999999999999999998765544

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.71  E-value=3.1e-17  Score=144.45  Aligned_cols=90  Identities=23%  Similarity=0.212  Sum_probs=85.0

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        66 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t  145 (183)
T 3deo_A           66 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT  145 (183)
T ss_dssp             TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred             cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCC
Confidence            66778899999999999999999999999999999999998 89999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCch
Q 039021           84 PLTDARLYGHR   94 (464)
Q Consensus        84 pl~~A~~~g~~   94 (464)
                      |||+|+..++.
T Consensus       146 pl~~A~~~~~~  156 (183)
T 3deo_A          146 ALELAREILKT  156 (183)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHhccC
Confidence            99999876443

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.71  E-value=6.5e-17  Score=148.34  Aligned_cols=104  Identities=20%  Similarity=0.143  Sum_probs=66.7

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCC------cccccCC
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN------LNLKDRW   80 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~------~~~~d~~   80 (464)
                      ..+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++      ++..|..
T Consensus        37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~  116 (236)
T 1ikn_D           37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN  116 (236)
T ss_dssp             CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred             HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence            4555666666666666666666666666666666666666666666666666666666666666654      3455666


Q ss_pred             CCCHHHHHHhcCchHHHHHHhcccCccccc
Q 039021           81 QRTPLTDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        81 g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      |.||||+|+..|+.+++++|+++|++.+..
T Consensus       117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~  146 (236)
T 1ikn_D          117 GHTCLHLASIHGYLGIVELLVSLGADVNAQ  146 (236)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence            666666666666666666666666655433

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.71  E-value=6.2e-17  Score=147.76  Aligned_cols=107  Identities=26%  Similarity=0.265  Sum_probs=72.2

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        63 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~  142 (231)
T 3aji_A           63 GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATA  142 (231)
T ss_dssp             TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence            34455666667777777777777777777777777777666667777777777777777777777677666666666777


Q ss_pred             HHHHHhcCchHHHHHHhcccCcccccc
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      ||+|+..|+.+++++|+.+|++.+..+
T Consensus       143 L~~A~~~~~~~~v~~Ll~~g~~~~~~~  169 (231)
T 3aji_A          143 MHRAAAKGNLKMVHILLFYKASTNIQD  169 (231)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred             HHHHHHcCCHHHHHHHHhcCCCccccC
Confidence            777776666677777766666554433

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.70  E-value=4.1e-17  Score=149.13  Aligned_cols=108  Identities=19%  Similarity=0.195  Sum_probs=90.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCC-----CCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSP-----NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR   79 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~-----n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~   79 (464)
                      +++.+..|..|.||||+|+..|+.++++.|++.|+++     +.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus        27 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  106 (232)
T 2rfa_A           27 GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARAT  106 (232)
T ss_dssp             CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred             CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccC
Confidence            6667778888888888888888888888888888876     67778888888888888888888888888888887765


Q ss_pred             -------------CCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           80 -------------WQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        80 -------------~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                                   .|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~  152 (232)
T 2rfa_A          107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS  152 (232)
T ss_dssp             SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence                         688888888888888888888888887665543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.70  E-value=3.4e-17  Score=151.27  Aligned_cols=101  Identities=24%  Similarity=0.229  Sum_probs=93.7

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        67 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t  146 (244)
T 3ui2_A           67 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT  146 (244)
T ss_dssp             TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence            67788899999999999999999999999999999999998 88999999999999999999999999999999999999


Q ss_pred             HHHHHH----------------hcCchHHHHHHhcccC
Q 039021           84 PLTDAR----------------LYGHRDICRILEVNGG  105 (464)
Q Consensus        84 pl~~A~----------------~~g~~~iv~~L~~~g~  105 (464)
                      |||+|+                ..|+.+++++|..++.
T Consensus       147 ~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~  184 (244)
T 3ui2_A          147 ALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF  184 (244)
T ss_dssp             HHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred             HHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence            999988                5577888888887654

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.70  E-value=5.1e-17  Score=147.46  Aligned_cols=108  Identities=19%  Similarity=0.150  Sum_probs=97.7

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGT-SPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga-~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      +++.+..|..|.||||+|+..|+.++++.|++.|+ +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus        48 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t  127 (223)
T 2f8y_A           48 SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS  127 (223)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCB
T ss_pred             CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCc
Confidence            56677888999999999999999999999999987 89999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus       128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  156 (223)
T 2f8y_A          128 ALHWAAAVNNVDAAVVLLKNGANKDMQNN  156 (223)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            99999999999999999999987765543

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.70  E-value=3e-17  Score=160.74  Aligned_cols=108  Identities=14%  Similarity=0.072  Sum_probs=85.8

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTS-----PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR   79 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~-----~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~   79 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|++     +|.+|..|+||||+|+..|+.++|++|+++|++++.+|.
T Consensus       163 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~  242 (364)
T 3ljn_A          163 GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN  242 (364)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred             CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence            456677777888888888888888888888888777     888888888888888888888888888888888888888


Q ss_pred             CCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           80 WQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        80 ~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .|.||||+|+..|+.+++++|+++|+.....+.
T Consensus       243 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~  275 (364)
T 3ljn_A          243 EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQAC  275 (364)
T ss_dssp             TSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTC
T ss_pred             CCCCHHHHHHHhChHHHHHHHHHcCCchhhhcC
Confidence            888888888888888888888888776544443

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.70  E-value=1.7e-17  Score=154.48  Aligned_cols=96  Identities=19%  Similarity=0.051  Sum_probs=91.5

Q ss_pred             cccchHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCChHhHHHHHcCC---------HHHHHHhhccCCCc------
Q 039021           13 MQVIGNFLSFASRGDRVGLNQMLR---EGTSPNVQDYDKRTALHLAASEGH---------APIVELLLQYKANL------   74 (464)
Q Consensus        13 ~~g~t~l~~a~~~g~~~~~~~ll~---~ga~~n~~d~~g~t~lh~A~~~g~---------~~~v~~Ll~~ga~~------   74 (464)
                      ..|.||||+|+..|+.++++.|++   .|+++|.+|..|+||||+|+..++         .+++++|+++|+++      
T Consensus       138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~  217 (260)
T 3jxi_A          138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL  217 (260)
T ss_dssp             CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccch
Confidence            689999999999999999999999   999999999999999999999888         79999999999999      


Q ss_pred             -ccccCCCCCHHHHHHhcCchHHHHHHhcccCccc
Q 039021           75 -NLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        75 -~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                       +.+|..|.||||+|+..|+.+++++|+++|....
T Consensus       218 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~  252 (260)
T 3jxi_A          218 EALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA  252 (260)
T ss_dssp             GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             hhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence             7799999999999999999999999999998654

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.70  E-value=1.7e-17  Score=154.18  Aligned_cols=94  Identities=20%  Similarity=0.091  Sum_probs=90.5

Q ss_pred             cchHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCChHhHHHHH--cCCHH-------HHHHhhccCCCc-------c
Q 039021           15 VIGNFLSFASRGDRVGLNQMLR---EGTSPNVQDYDKRTALHLAAS--EGHAP-------IVELLLQYKANL-------N   75 (464)
Q Consensus        15 g~t~l~~a~~~g~~~~~~~ll~---~ga~~n~~d~~g~t~lh~A~~--~g~~~-------~v~~Ll~~ga~~-------~   75 (464)
                      |.||||+|+..|+.++++.|++   +|+++|.+|..|+||||+|+.  .++.+       ++++|+++|+++       +
T Consensus       136 g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~  215 (256)
T 2etb_A          136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE  215 (256)
T ss_dssp             CSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGG
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccc
Confidence            9999999999999999999999   999999999999999999999  88888       999999999999       9


Q ss_pred             cccCCCCCHHHHHHhcCchHHHHHHhcccCccc
Q 039021           76 LKDRWQRTPLTDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        76 ~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      .+|..|.||||+|+..|+.+++++|+++|....
T Consensus       216 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~  248 (256)
T 2etb_A          216 ISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA  248 (256)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence            999999999999999999999999999998654

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.70  E-value=5.9e-17  Score=150.38  Aligned_cols=101  Identities=26%  Similarity=0.285  Sum_probs=95.4

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus       146 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t  225 (253)
T 1yyh_A          146 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL  225 (253)
T ss_dssp             TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCC
Confidence            35677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhccc
Q 039021           84 PLTDARLYGHRDICRILEVNG  104 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g  104 (464)
                      |+++|+..|+.+++++|....
T Consensus       226 pl~~A~~~g~~~i~~~l~~~~  246 (253)
T 1yyh_A          226 PRDIAQERMHHDIVRLLDLEH  246 (253)
T ss_dssp             HHHHHHHTTCHHHHHHHHC--
T ss_pred             HHHHHHHcCCHHHHHHHHHHh
Confidence            999999999999999998654

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.70  E-value=5.2e-17  Score=150.90  Aligned_cols=98  Identities=17%  Similarity=0.125  Sum_probs=93.0

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-------------CChHhHHHHHcCCHHHHHHhhc---cCCC
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYD-------------KRTALHLAASEGHAPIVELLLQ---YKAN   73 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~-------------g~t~lh~A~~~g~~~~v~~Ll~---~ga~   73 (464)
                      +.|..|.||||+|+..|+.++++.|+++|+++|.+|..             |+||||+|+..|+.+++++|++   +|++
T Consensus        85 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~  164 (256)
T 2etb_A           85 DEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS  164 (256)
T ss_dssp             STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred             cccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence            45678999999999999999999999999999999987             9999999999999999999999   9999


Q ss_pred             cccccCCCCCHHHHHHh--cCchH-------HHHHHhcccCcc
Q 039021           74 LNLKDRWQRTPLTDARL--YGHRD-------ICRILEVNGGKD  107 (464)
Q Consensus        74 ~~~~d~~g~tpl~~A~~--~g~~~-------iv~~L~~~g~~~  107 (464)
                      ++.+|..|.||||+|+.  .++.+       ++++|+++|++.
T Consensus       165 ~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~  207 (256)
T 2etb_A          165 LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL  207 (256)
T ss_dssp             TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence            99999999999999998  78888       999999999876

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.70  E-value=2.8e-17  Score=154.29  Aligned_cols=93  Identities=16%  Similarity=0.075  Sum_probs=89.9

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCChHhHHHHHcCC---------HHHHHHhhccCCCcc------
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLR---EGTSPNVQDYDKRTALHLAASEGH---------APIVELLLQYKANLN------   75 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~---~ga~~n~~d~~g~t~lh~A~~~g~---------~~~v~~Ll~~ga~~~------   75 (464)
                      .|.||||+|+..|+.++++.|++   .|+++|.+|..|+||||+|+..|+         .+++++|+++|++++      
T Consensus       147 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~  226 (273)
T 2pnn_A          147 FGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE  226 (273)
T ss_dssp             SCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc
Confidence            79999999999999999999999   999999999999999999999998         899999999999997      


Q ss_pred             -cccCCCCCHHHHHHhcCchHHHHHHhcccCc
Q 039021           76 -LKDRWQRTPLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        76 -~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                       .+|..|.||||+|+..|+.+++++|+++|+.
T Consensus       227 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~  258 (273)
T 2pnn_A          227 EITNRKGLTPLALAASSGKIGVLAYILQREIH  258 (273)
T ss_dssp             GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred             cccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence             4899999999999999999999999999994

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.69  E-value=7.1e-17  Score=144.02  Aligned_cols=109  Identities=25%  Similarity=0.267  Sum_probs=98.8

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccC-CCcccccCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK-ANLNLKDRWQ   81 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll-~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g   81 (464)
                      -+++.+..|..|.||||+|+..|+.++++.|+ ..+++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|
T Consensus        61 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g  140 (201)
T 3hra_A           61 RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG  140 (201)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTS
T ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC
Confidence            35677888999999999999999999999999 557899999999999999999999999999999999 9999999999


Q ss_pred             CCHHHHHHhcCc-----hHHHHHHhcccCccccccC
Q 039021           82 RTPLTDARLYGH-----RDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        82 ~tpl~~A~~~g~-----~~iv~~L~~~g~~~~~~~~  112 (464)
                      .||||+|+..+.     .+++++|+++|++.+..+.
T Consensus       141 ~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~  176 (201)
T 3hra_A          141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN  176 (201)
T ss_dssp             CCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred             CCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence            999999998887     8999999999998776654

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.69  E-value=4.7e-17  Score=151.54  Aligned_cols=100  Identities=19%  Similarity=0.158  Sum_probs=93.8

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCChHhHHHHHcCCHHHHHHhhc---c
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD--------------YDKRTALHLAASEGHAPIVELLLQ---Y   70 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d--------------~~g~t~lh~A~~~g~~~~v~~Ll~---~   70 (464)
                      ....|..|.||||+|+..|+.++++.|+++|+++|.+|              ..|+||||+|+..|+.+++++|++   +
T Consensus        86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~  165 (260)
T 3jxi_A           86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK  165 (260)
T ss_dssp             BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred             ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence            35556799999999999999999999999999999999              689999999999999999999999   9


Q ss_pred             CCCcccccCCCCCHHHHHHhcCc---------hHHHHHHhcccCcc
Q 039021           71 KANLNLKDRWQRTPLTDARLYGH---------RDICRILEVNGGKD  107 (464)
Q Consensus        71 ga~~~~~d~~g~tpl~~A~~~g~---------~~iv~~L~~~g~~~  107 (464)
                      |++++.+|..|.||||+|+..++         .+++++|+++|++.
T Consensus       166 ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~  211 (260)
T 3jxi_A          166 QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL  211 (260)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence            99999999999999999998777         69999999999876

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.69  E-value=8.7e-17  Score=143.46  Aligned_cols=107  Identities=18%  Similarity=0.215  Sum_probs=96.7

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhh-ccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL-QYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t   83 (464)
                      +.+.+..|.+|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+ ..+++++.+|..|.|
T Consensus        29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t  108 (201)
T 3hra_A           29 TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGN  108 (201)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCc
Confidence            3467888999999999999999999999999999999999999999999999999999999999 567799999999999


Q ss_pred             HHHHHHhcCchHHHHHHhccc-Ccccccc
Q 039021           84 PLTDARLYGHRDICRILEVNG-GKDFIHD  111 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g-~~~~~~~  111 (464)
                      |||+|+..|+.+++++|+++| ++.+..+
T Consensus       109 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  137 (201)
T 3hra_A          109 ALIPAAEKGHIDNVKLLLEDGREDIDFQN  137 (201)
T ss_dssp             SHHHHHHTTCHHHHHHHHHHCCCCTTCCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcCCCC
Confidence            999999999999999999998 5554443

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.69  E-value=1.3e-16  Score=146.15  Aligned_cols=106  Identities=19%  Similarity=0.166  Sum_probs=73.5

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      ...+..|..|.||||+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus       102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L  181 (237)
T 3b7b_A          102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPL  181 (237)
T ss_dssp             CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred             CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            34455666677777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHhcCchHHHHHHhcccCcccccc
Q 039021           86 TDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      |+|+..++.+++++|+++|++.+..+
T Consensus       182 ~~A~~~~~~~~v~~Ll~~gad~~~~d  207 (237)
T 3b7b_A          182 HIAARENRYDCVVLFLSRDSDVTLKN  207 (237)
T ss_dssp             HHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred             HHHHHhCCHhHHHHHHHcCCCCCccC
Confidence            77777777777777777766655443

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.69  E-value=1.9e-16  Score=145.37  Aligned_cols=106  Identities=19%  Similarity=0.172  Sum_probs=92.9

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      ..+..|..|.||||+|+..|+.++++.|++.|++++.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus       108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  187 (241)
T 1k1a_A          108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL  187 (241)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred             cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            456677889999999999999999999999999999888 7899999999999999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHhcccCccccccC
Q 039021           86 TDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+|+..|+.+++++|+++|++.+..+.
T Consensus       188 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~  214 (241)
T 1k1a_A          188 HSASGRGLLPLVRTLVRSGADSSLKNC  214 (241)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence            999999999999999999887766554

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.69  E-value=7.7e-17  Score=157.30  Aligned_cols=101  Identities=24%  Similarity=0.264  Sum_probs=74.9

Q ss_pred             ccCCCCCC--cccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            5 AAASGDFD--MQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         5 ~~~~~~~d--~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      +++.+..|  ..|.||||+|+..|+.++++.||++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus       223 Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~  302 (368)
T 3jue_A          223 GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGR  302 (368)
T ss_dssp             TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCC
Confidence            44555555  6677777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CHHHHHHhcCchHHHHHHhcccC
Q 039021           83 TPLTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~  105 (464)
                      ||||+|+..++.+++++|+..+.
T Consensus       303 TpL~~A~~~g~~~iv~lLl~~~~  325 (368)
T 3jue_A          303 DPLTIAMETANADIVTLLRLAKM  325 (368)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHHC
T ss_pred             CHHHHHHHCCCHHHHHHHHHcCC
Confidence            77777777777777777776654

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.69  E-value=5e-17  Score=153.76  Aligned_cols=104  Identities=16%  Similarity=0.080  Sum_probs=97.6

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ..+..|.+|.||||+|+..|+.++++.|+++|+++|.+|  |+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus        23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~  100 (285)
T 3kea_A           23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY  100 (285)
T ss_dssp             TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence            467889999999999999999999999999999999885  999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhcccCccccccC
Q 039021           87 DARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +|+..|+.+++++|+++|++.+..+.
T Consensus       101 ~A~~~g~~~~v~~Ll~~ga~~~~~~~  126 (285)
T 3kea_A          101 YAVDSGNMQTVKLFVKKNWRLMFYGK  126 (285)
T ss_dssp             HHHHTTCHHHHHHHHHHCGGGGGCSS
T ss_pred             HHHHcCCHHHHHHHHhcCCCCCccCC
Confidence            99999999999999999997765443

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.68  E-value=4.7e-17  Score=152.76  Aligned_cols=99  Identities=18%  Similarity=0.142  Sum_probs=93.7

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------------CCChHhHHHHHcCCHHHHHHhhc---cCC
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDY--------------DKRTALHLAASEGHAPIVELLLQ---YKA   72 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~--------------~g~t~lh~A~~~g~~~~v~~Ll~---~ga   72 (464)
                      +.|..|.||||+|+..|+.+++++|+++|+++|.+|.              .|+||||+|+..|+.+++++|++   +|+
T Consensus        96 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga  175 (273)
T 2pnn_A           96 DSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA  175 (273)
T ss_dssp             STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred             cccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence            4677899999999999999999999999999999997              79999999999999999999999   999


Q ss_pred             CcccccCCCCCHHHHHHhcCc---------hHHHHHHhcccCccc
Q 039021           73 NLNLKDRWQRTPLTDARLYGH---------RDICRILEVNGGKDF  108 (464)
Q Consensus        73 ~~~~~d~~g~tpl~~A~~~g~---------~~iv~~L~~~g~~~~  108 (464)
                      +++.+|..|.||||+|+..|+         .+++++|+.+|++.+
T Consensus       176 d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n  220 (273)
T 2pnn_A          176 DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH  220 (273)
T ss_dssp             CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999888         799999999998764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.68  E-value=1.3e-17  Score=157.22  Aligned_cols=139  Identities=15%  Similarity=0.019  Sum_probs=103.6

Q ss_pred             cccccccccceeeeeEEeEEe-CceEEEEEeeccCCchH---------------HHHHhHHHH-HHHHhcCCCceeeeec
Q 039021          134 TLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPV---------------KMVLSAKDN-CKLRELRHPNILQFLG  196 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~---------------~~~~~~~~e-~~l~~l~hpnIv~~~~  196 (464)
                      |.+++.||+|+||.||+|.+. |+.||+|+++.......               .....+.+| .+|++++  | +++++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~  168 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK  168 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence            556799999999999999994 88999999975321111               235568889 9999999  5 67777


Q ss_pred             eeeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          197 SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       197 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      ++.. +..++||||++||+|.+ +..      .+...++.|+++                  |||++ ++.+||+|||+|
T Consensus       169 ~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a  239 (282)
T 1zar_A          169 VYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQS  239 (282)
T ss_dssp             EEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred             EEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence            5544 56799999999999988 532      233457777765                  99999 999999999998


Q ss_pred             hhhcccCCCCcCCCCccccccccc----------CCCCCcccchhH
Q 039021          259 MFYEQIHPNQENSQRNDNSSIASN----------VLDDTKKDICSF  294 (464)
Q Consensus       259 ~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwSl  294 (464)
                      +.          +..++|||++..          ..|...+|+|.+
T Consensus       240 ~~----------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~  275 (282)
T 1zar_A          240 VE----------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA  275 (282)
T ss_dssp             EE----------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred             eE----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence            63          456789998753          345666677654

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.68  E-value=1.7e-16  Score=144.74  Aligned_cols=107  Identities=25%  Similarity=0.229  Sum_probs=98.9

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      ...+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus        31 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  110 (231)
T 3aji_A           31 SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPL  110 (231)
T ss_dssp             GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence            34567788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHhcccCccccccC
Q 039021           86 TDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+|+..++.+++++|+++|++.+..+.
T Consensus       111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~  137 (231)
T 3aji_A          111 HYAASKNRHEIAVMLLEGGANPDAKDH  137 (231)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            999999999999999999987665543

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.68  E-value=2.3e-16  Score=149.85  Aligned_cols=70  Identities=19%  Similarity=0.167  Sum_probs=36.9

Q ss_pred             CCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccc
Q 039021            7 ASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL   76 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~   76 (464)
                      +.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus        65 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~  134 (299)
T 1s70_B           65 DINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA  134 (299)
T ss_dssp             CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred             CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence            3444455555555555555555555555555555555555555555555555555555555555554443

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.68  E-value=1.8e-16  Score=144.89  Aligned_cols=99  Identities=19%  Similarity=0.152  Sum_probs=93.7

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-------------CCChHhHHHHHcCCHHHHHHhhccCCCcc
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDY-------------DKRTALHLAASEGHAPIVELLLQYKANLN   75 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~-------------~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~   75 (464)
                      +..|..|.||||+|+..|+.++++.|+++|++++.++.             .|+||||+|+..|+.+++++|+++|++++
T Consensus        69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  148 (232)
T 2rfa_A           69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR  148 (232)
T ss_dssp             CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred             cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            55678999999999999999999999999999998876             79999999999999999999999999999


Q ss_pred             cccCCCCCHHHHHHhcCchHHH----HHHhcccCcc
Q 039021           76 LKDRWQRTPLTDARLYGHRDIC----RILEVNGGKD  107 (464)
Q Consensus        76 ~~d~~g~tpl~~A~~~g~~~iv----~~L~~~g~~~  107 (464)
                      .+|..|.||||+|+..|+.+++    ++|+.+|++.
T Consensus       149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~  184 (232)
T 2rfa_A          149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD  184 (232)
T ss_dssp             CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred             CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence            9999999999999999999988    9999999865

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.68  E-value=1.6e-16  Score=149.62  Aligned_cols=105  Identities=26%  Similarity=0.246  Sum_probs=84.8

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCC-CCCCcC--------------------------------------CCC
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGT-SPNVQD--------------------------------------YDK   48 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga-~~n~~d--------------------------------------~~g   48 (464)
                      .+..|.+|.||||+|+..|+.++++.|++.|+ ++|.+|                                      ..|
T Consensus       104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g  183 (276)
T 4hbd_A          104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG  183 (276)
T ss_dssp             HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred             CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence            35667788888888888888888888888877 565554                                      457


Q ss_pred             ChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHhc-ccCccccccC
Q 039021           49 RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEV-NGGKDFIHDQ  112 (464)
Q Consensus        49 ~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~-~g~~~~~~~~  112 (464)
                      +||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+. .|++.+..+.
T Consensus       184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~  248 (276)
T 4hbd_A          184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDR  248 (276)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCT
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCC
Confidence            788888888888899999998899988888889999999998888899998888 7777665544

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=150.84  Aligned_cols=101  Identities=24%  Similarity=0.242  Sum_probs=96.7

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      .+..|..|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus        52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~  131 (285)
T 3d9h_A           52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN  131 (285)
T ss_dssp             TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHH
T ss_pred             ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHhcccCccc
Q 039021           88 ARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      |+..|+.+++++|+++|++..
T Consensus       132 A~~~~~~~~v~~Ll~~g~~~~  152 (285)
T 3d9h_A          132 ACVSGSWDCVNLLLQHGASVQ  152 (285)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSS
T ss_pred             HHHcCHHHHHHHHHHCCCCCC
Confidence            999999999999999988654

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.68  E-value=1.1e-16  Score=155.00  Aligned_cols=99  Identities=20%  Similarity=0.134  Sum_probs=60.0

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~-ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      |++.+..|.+|.||||+|+..|+.++++.|+.. |+++|.+|.+|+||||+|+..|+.++|++|+++|+++|.+     +
T Consensus       229 gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~  303 (337)
T 4g8k_A          229 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----D  303 (337)
T ss_dssp             TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----C
T ss_pred             CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----C
Confidence            344555566666666666666666666666653 5666666666666666666666666666666666665543     3


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      |||+|+..|+.+++++|+++|++++
T Consensus       304 ~L~~A~~~~~~~iv~~Ll~~GA~~d  328 (337)
T 4g8k_A          304 LVMTARRNYDHSLVKVLLSHGAKED  328 (337)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred             HHHHHHHcCCHHHHHHHHHCcCCCC
Confidence            6666666666666666666666544

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.68  E-value=1.7e-16  Score=153.23  Aligned_cols=87  Identities=18%  Similarity=0.116  Sum_probs=64.1

Q ss_pred             CCccCCCC-CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCC---HHHHHHhhccC-CCcccc
Q 039021            3 GDAAASGD-FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGH---APIVELLLQYK-ANLNLK   77 (464)
Q Consensus         3 ~~~~~~~~-~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~---~~~v~~Ll~~g-a~~~~~   77 (464)
                      ..+++.+. .|.+|.||||+||..|+.++++.||++|+++|.+|..|+||||+|+..|+   .++++.|++.+ ++++.+
T Consensus       118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~  197 (327)
T 1sw6_A          118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE  197 (327)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred             hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCC
Confidence            34566777 79999999999999999999999999999999999999999999998776   34444444433 333333


Q ss_pred             cCCCCCHHHHHH
Q 039021           78 DRWQRTPLTDAR   89 (464)
Q Consensus        78 d~~g~tpl~~A~   89 (464)
                      |..|.||||+|+
T Consensus       198 d~~g~tpLh~A~  209 (327)
T 1sw6_A          198 DSMNRTILHHII  209 (327)
T ss_dssp             CTTCCCHHHHHH
T ss_pred             CCCCCCHHHHHH
Confidence            333333333333

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.68  E-value=2e-16  Score=148.67  Aligned_cols=107  Identities=22%  Similarity=0.184  Sum_probs=93.1

Q ss_pred             ccCCCCCCcccchHHHHHHHcCC----HHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhc-cCCCcccccC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGD----RVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ-YKANLNLKDR   79 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~----~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~   79 (464)
                      +++.+..|..|.||||+|+..++    .++++.|+++|+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|.
T Consensus       172 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~  251 (285)
T 1wdy_A          172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS  251 (285)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT
T ss_pred             CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCC
Confidence            56667788889999999998888    888888999999999888889999999999999999999988 7889988888


Q ss_pred             CCCCHHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           80 WQRTPLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        80 ~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      .|.||||+|+..|+.+++++|+++|++.+..+
T Consensus       252 ~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          252 DGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             CCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence            99999999999999999999999888776654

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.68  E-value=8.5e-17  Score=151.28  Aligned_cols=100  Identities=22%  Similarity=0.072  Sum_probs=95.5

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTS---PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~---~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      .+..|.+|.||||+|+..|+.++++.|++.|++   +|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp   81 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA   81 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence            356799999999999999999999999999998   89999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCcc
Q 039021           85 LTDARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      ||+|+..|+.+++++|+.+++..
T Consensus        82 L~~A~~~~~~~~v~~Ll~~~~~~  104 (282)
T 1oy3_D           82 LHLACRVRAHTCACVLLQPRPSH  104 (282)
T ss_dssp             HHHHTTTTCHHHHHHHSSSCCSS
T ss_pred             HHHHHHcCCcchhHhhhccCCCC
Confidence            99999999999999999988754

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.67  E-value=1.2e-16  Score=160.43  Aligned_cols=108  Identities=24%  Similarity=0.280  Sum_probs=85.2

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|.||
T Consensus       268 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~  347 (437)
T 1n11_A          268 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSP  347 (437)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            45556667778888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++++..+.
T Consensus       348 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~  375 (437)
T 1n11_A          348 LHQAAQQGHTDIVTLLLKNGASPNEVSS  375 (437)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred             HHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence            8888888888888888888877665543

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.67  E-value=1.6e-16  Score=150.97  Aligned_cols=104  Identities=27%  Similarity=0.302  Sum_probs=97.6

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      ...+..|.|+||+||..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus        34 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A  113 (299)
T 1s70_B           34 TKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA  113 (299)
T ss_dssp             CCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             cccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            45567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHhcccCccccccC
Q 039021           89 RLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      +..|+.+++++|+++|++.+..+.
T Consensus       114 ~~~g~~~~v~~Ll~~g~~~~~~~~  137 (299)
T 1s70_B          114 ASCGYLDIAEYLISQGAHVGAVNS  137 (299)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHcCCHHHHHHHHhCCCCCCCcCC
Confidence            999999999999999987655443

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.67  E-value=1.4e-16  Score=160.02  Aligned_cols=108  Identities=28%  Similarity=0.379  Sum_probs=92.3

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ++..+..|..|.||||+||..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus         4 g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~   83 (437)
T 1n11_A            4 GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTP   83 (437)
T ss_dssp             -----------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCH
T ss_pred             CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH
Confidence            55667889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++.+..+.
T Consensus        84 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~  111 (437)
T 1n11_A           84 LHCAARIGHTNMVKLLLENNANPNLATT  111 (437)
T ss_dssp             HHHHHHHTCHHHHHHHHHHTCCTTCCCT
T ss_pred             HHHHHHCCCHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999987765544

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.65  E-value=1.8e-16  Score=149.85  Aligned_cols=101  Identities=17%  Similarity=0.089  Sum_probs=93.8

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCC-CC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ-RT   83 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~t   83 (464)
                      +++.+..  +|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..| .|
T Consensus        54 g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t  131 (285)
T 3kea_A           54 GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKT  131 (285)
T ss_dssp             TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGS
T ss_pred             CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCC
Confidence            3444545  48999999999999999999999999999999999999999999999999999999999999999999 79


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      |||+|+..|+.+++++|+.+|++.
T Consensus       132 ~L~~A~~~~~~~~v~~Ll~~g~~~  155 (285)
T 3kea_A          132 SFYHAVMLNDVSIVSYFLSEIPST  155 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCcc
Confidence            999999999999999999998754

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.65  E-value=2e-16  Score=154.82  Aligned_cols=102  Identities=16%  Similarity=0.119  Sum_probs=97.6

Q ss_pred             CCcccchHHHHHHHcC--CHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCC-----cccccCCCCC
Q 039021           11 FDMQVIGNFLSFASRG--DRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN-----LNLKDRWQRT   83 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g--~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~t   83 (464)
                      .|..|.||||+|+..|  +.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++     ++.+|..|.|
T Consensus       134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t  213 (364)
T 3ljn_A          134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS  213 (364)
T ss_dssp             EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred             CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence            6778999999999999  99999999999999999999999999999999999999999999999     9999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus       214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d~  242 (364)
T 3ljn_A          214 HLHWAILINWEDVAMRFVEMGIDVNMEDN  242 (364)
T ss_dssp             TTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999999999998766554

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.65  E-value=8.4e-16  Score=140.75  Aligned_cols=97  Identities=24%  Similarity=0.180  Sum_probs=93.7

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      .+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus         4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~   83 (237)
T 3b7b_A            4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL   83 (237)
T ss_dssp             CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred             cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence            46678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHhccc
Q 039021           88 ARLYGHRDICRILEVNG  104 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g  104 (464)
                      |+..|+.+++++|++++
T Consensus        84 A~~~~~~~~~~~Ll~~~  100 (237)
T 3b7b_A           84 AAKKGHYEVVQYLLSNG  100 (237)
T ss_dssp             HHHTTCHHHHHHHHTTT
T ss_pred             HHHcCCHHHHHHHHhCC
Confidence            99999999999999987

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.65  E-value=7.3e-16  Score=140.24  Aligned_cols=94  Identities=21%  Similarity=0.235  Sum_probs=46.5

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREG--TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~g--a~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      .|..|.||||+|+..|+.++++.|+++|  ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus        68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A  147 (228)
T 2dzn_A           68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA  147 (228)
T ss_dssp             CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence            3444445555555555555555554444  44444444455555555555555555555544555544444455555555


Q ss_pred             HhcCchHHHHHHhccc
Q 039021           89 RLYGHRDICRILEVNG  104 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g  104 (464)
                      +..|+.+++++|+++|
T Consensus       148 ~~~~~~~~v~~Ll~~g  163 (228)
T 2dzn_A          148 ASVGSLKLIELLCGLG  163 (228)
T ss_dssp             HHTTCHHHHHHHHTTT
T ss_pred             HHcCCHHHHHHHHhcC
Confidence            5555555555554444

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.64  E-value=8.2e-16  Score=145.36  Aligned_cols=98  Identities=19%  Similarity=0.197  Sum_probs=58.3

Q ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcC
Q 039021           13 MQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG   92 (464)
Q Consensus        13 ~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g   92 (464)
                      .+|.||||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++. |..|.||||+|+..|
T Consensus       155 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~  233 (285)
T 3d9h_A          155 SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTA  233 (285)
T ss_dssp             CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence            3455666666666666666666666666666666666666666666666666666666666653 555666666666666


Q ss_pred             chHHHHHHhcccCcccccc
Q 039021           93 HRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        93 ~~~iv~~L~~~g~~~~~~~  111 (464)
                      +.+++++|+++|++.+..+
T Consensus       234 ~~~~v~~Ll~~gad~~~~d  252 (285)
T 3d9h_A          234 SEELACLLMDFGADTQAKN  252 (285)
T ss_dssp             CHHHHHHHHHTTCCTTCCC
T ss_pred             CHHHHHHHHHCCCCCCCcC
Confidence            6666666666655544443

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.64  E-value=4.4e-16  Score=153.13  Aligned_cols=97  Identities=22%  Similarity=0.195  Sum_probs=91.8

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~g-a~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      ..|..|.||||+|+..|+.++++.|++.| +++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|
T Consensus       274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A  353 (373)
T 2fo1_E          274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA  353 (373)
T ss_dssp             SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred             cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence            36779999999999999999999999885 99999999999999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHhcccCc
Q 039021           89 RLYGHRDICRILEVNGGK  106 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~~  106 (464)
                      +..|+.+++++|++++++
T Consensus       354 ~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          354 QANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             HHTTCHHHHHHHHTTC--
T ss_pred             HHcCCHHHHHHHHhcCcc
Confidence            999999999999998874

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.63  E-value=1.3e-15  Score=143.09  Aligned_cols=104  Identities=19%  Similarity=0.221  Sum_probs=82.5

Q ss_pred             CCCCC-CcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            7 ASGDF-DMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         7 ~~~~~-d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      +.+.. |..|.||||+|+..|+.++++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus        30 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  109 (285)
T 1wdy_A           30 NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAF  109 (285)
T ss_dssp             CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHH
T ss_pred             CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHH
Confidence            33444 66778888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHhcCchHHHHHHhcccCccccc
Q 039021           86 TDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                      |+|+..|+.+++++|+++|++....
T Consensus       110 ~~A~~~~~~~~~~~Ll~~g~~~~~~  134 (285)
T 1wdy_A          110 MEAAVYGKVKALKFLYKRGANVNLR  134 (285)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHhCCHHHHHHHHHhCCCcccc
Confidence            8888888888888888877765443

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.63  E-value=1.4e-15  Score=139.56  Aligned_cols=97  Identities=19%  Similarity=0.123  Sum_probs=79.4

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLR----EGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~----~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +..|.+|.||||+|+..|+.++++.|++    .|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   82 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA   82 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence            4567888888888888888888888886    688888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhcCchHHHHHHhcccC
Q 039021           85 LTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~  105 (464)
                      ||+|+..|+.+++++|++++.
T Consensus        83 l~~A~~~~~~~~~~~Ll~~~~  103 (241)
T 1k1a_A           83 AHLACEHRSPTCLRALLDSAA  103 (241)
T ss_dssp             HHHHHHTTCHHHHHHHHHHSC
T ss_pred             HHHHHHcCCHHHHHHHHHcCC
Confidence            888888888888888888776

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.63  E-value=1.1e-15  Score=148.18  Aligned_cols=106  Identities=25%  Similarity=0.287  Sum_probs=98.7

Q ss_pred             CCCCCCcccchHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            7 ASGDFDMQVIGNFLSFASR---GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~---g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .....+..|.||||+|+..   +..++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus       203 ~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t  282 (351)
T 3utm_A          203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQT  282 (351)
T ss_dssp             TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            3445677899999999999   5689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |||+|+..|+.+++++|+++|++.+..+.
T Consensus       283 ~L~~A~~~~~~~~v~~Ll~~gad~~~~~~  311 (351)
T 3utm_A          283 ALHRAALAGHLQTCRLLLSYGSDPSIISL  311 (351)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHHcCcHHHHHHHHHcCCCCCCcCC
Confidence            99999999999999999999998776664

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.61  E-value=2.2e-15  Score=145.84  Aligned_cols=107  Identities=22%  Similarity=0.187  Sum_probs=88.8

Q ss_pred             ccCCCCCCcccchHHHHHHHcCC----HHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhcc-CCCcccccC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGD----RVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDR   79 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~----~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~   79 (464)
                      +++.+..|..|.|+||+++..++    ..++++|+++|+|+|.+|..|+||||+|+..|+.+++++|+.. |++++.+|.
T Consensus       192 gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~  271 (337)
T 4g8k_A          192 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS  271 (337)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCT
T ss_pred             CCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCC
Confidence            55667777777777777665433    2466777788888888889999999999999999999999875 899999999


Q ss_pred             CCCCHHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           80 WQRTPLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        80 ~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      .|.||||+|+..|+.+++++|+++|++.+..+
T Consensus       272 ~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~  303 (337)
T 4g8k_A          272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD  303 (337)
T ss_dssp             TSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999999999999876554

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.60  E-value=2e-15  Score=148.38  Aligned_cols=106  Identities=18%  Similarity=0.187  Sum_probs=100.4

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccC---CCcccccCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK---ANLNLKDRW   80 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~g---a~~~~~d~~   80 (464)
                      .+++.+..|.+|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|   ++++.+|..
T Consensus       155 ~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~  234 (373)
T 2fo1_E          155 AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRN  234 (373)
T ss_dssp             TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTT
T ss_pred             cCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCC
Confidence            46777889999999999999999999999999999999999999999999999999999999999998   899999999


Q ss_pred             CCCHHHHHHhcC---chHHHHHHhcccCcccc
Q 039021           81 QRTPLTDARLYG---HRDICRILEVNGGKDFI  109 (464)
Q Consensus        81 g~tpl~~A~~~g---~~~iv~~L~~~g~~~~~  109 (464)
                      |.||||+|+..+   +.+++++|+++|++.+.
T Consensus       235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~  266 (373)
T 2fo1_E          235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDY  266 (373)
T ss_dssp             SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC
T ss_pred             CCCHHHHHHHhCCcchHHHHHHHHHCCCCccc
Confidence            999999999988   89999999999987654

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.59  E-value=2.2e-15  Score=146.94  Aligned_cols=99  Identities=23%  Similarity=0.242  Sum_probs=94.0

Q ss_pred             ccchHHHHHHHc-CCHHHHHHHHHcCCCCCCcC--CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHh
Q 039021           14 QVIGNFLSFASR-GDRVGLNQMLREGTSPNVQD--YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL   90 (464)
Q Consensus        14 ~g~t~l~~a~~~-g~~~~~~~ll~~ga~~n~~d--~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   90 (464)
                      .+.|+||+|+.. |++++++.||++|+|+|.+|  ..|+||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+.
T Consensus       198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~  277 (368)
T 3jue_A          198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI  277 (368)
T ss_dssp             CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            467899999999 99999999999999999999  899999999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHhcccCccccccC
Q 039021           91 YGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        91 ~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .|+.+++++|+.+|++.+..+.
T Consensus       278 ~g~~~~v~~LL~~Gad~~~~d~  299 (368)
T 3jue_A          278 LGHTGLACLFLKRGADLGARDS  299 (368)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCT
T ss_pred             cCcHHHHHHHHHCcCCCCCcCC
Confidence            9999999999999998766554

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.58  E-value=8.6e-15  Score=133.84  Aligned_cols=97  Identities=20%  Similarity=0.173  Sum_probs=46.5

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccccc-CCCCCHHHHHH
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD-RWQRTPLTDAR   89 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~   89 (464)
                      .|+.|.|+||+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+
T Consensus         5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~   84 (240)
T 3eu9_A            5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT   84 (240)
T ss_dssp             CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred             cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence            34444445555555555555555555444444444445555555555555555555554444444322 22444555555


Q ss_pred             hcCchHHHHHHhcccCcc
Q 039021           90 LYGHRDICRILEVNGGKD  107 (464)
Q Consensus        90 ~~g~~~iv~~L~~~g~~~  107 (464)
                      ..|+.+++++|+++|++.
T Consensus        85 ~~~~~~~v~~Ll~~g~~~  102 (240)
T 3eu9_A           85 RQGHLSMVVQLMKYGADP  102 (240)
T ss_dssp             HHTCHHHHHHHHHTTCCT
T ss_pred             HcCCHHHHHHHHHcCCCC
Confidence            444444444444444433

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.56  E-value=1.4e-14  Score=132.31  Aligned_cols=109  Identities=21%  Similarity=0.173  Sum_probs=99.3

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|++.|++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        31 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~  110 (240)
T 3eu9_A           31 AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGC  110 (240)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence            356677889999999999999999999999999999988665 4599999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           83 TPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||||+|+..|+.+++++|+++|++....+.
T Consensus       111 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~  140 (240)
T 3eu9_A          111 SCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ  140 (240)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             CHHHHHHHcCHHHHHHHHHhcCCCccccCC
Confidence            999999999999999999999887655443

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=99.55  E-value=9.2e-15  Score=149.19  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=92.3

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCCc------CCCCChHhHHHHH---cCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021           15 VIGNFLSFASRGDRVGLNQMLREGTSPNVQ------DYDKRTALHLAAS---EGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus        15 g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~------d~~g~t~lh~A~~---~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      ..+.||.|+..|+.+.++.||+.|+|+|.+      |..|+||||+||.   .|+.+++++|+++|+++|.+|..|.|||
T Consensus       132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL  211 (497)
T 3lvq_E          132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL  211 (497)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred             cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence            347899999999999999999999999988      8899999999966   9999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHhcccCccccccC
Q 039021           86 TDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+|+..|+.+++++|+++|++.+..+.
T Consensus       212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~  238 (497)
T 3lvq_E          212 HYAALYNQPDCLKLLLKGRALVGTVNE  238 (497)
T ss_dssp             HHHTTTTCHHHHHHHHHTCCCCSCCCT
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            999999999999999999998776665

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.55  E-value=1.7e-14  Score=137.33  Aligned_cols=99  Identities=18%  Similarity=0.198  Sum_probs=92.3

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCChHhHHHHHc---CCHHHHHHhhccCCCcccccCCCCCH
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLREGTSPNV------QDYDKRTALHLAASE---GHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~------~d~~g~t~lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      .+.++|+.|+..|+.+.++.|++.|+++|.      +|..|+||||+|+..   |+.+++++|+++|+++|.+|..|.||
T Consensus       150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp  229 (301)
T 2b0o_E          150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA  229 (301)
T ss_dssp             -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred             chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            355789999999999999999999999998      699999999999997   89999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++.+..+.
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~  257 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRALVGTVNE  257 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCCSCCCT
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence            9999999999999999999998776654

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.54  E-value=5.2e-15  Score=119.45  Aligned_cols=83  Identities=23%  Similarity=0.197  Sum_probs=76.3

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      ..+++.+..|..|.||||+|+..|+.++++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++|.++..|.
T Consensus        30 ~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~  109 (115)
T 2l6b_A           30 SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSS  109 (115)
T ss_dssp             TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC
T ss_pred             HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccc
Confidence            34667788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHH
Q 039021           83 TPL   85 (464)
Q Consensus        83 tpl   85 (464)
                      +|-
T Consensus       110 ~~~  112 (115)
T 2l6b_A          110 HHH  112 (115)
T ss_dssp             ---
T ss_pred             ccc
Confidence            874

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.53  E-value=2.7e-14  Score=134.34  Aligned_cols=99  Identities=22%  Similarity=0.211  Sum_probs=91.7

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCCC------CcCCCCChHhHHHHHc---CCHHHHHHhhccCCCcccccCCCCCH
Q 039021           14 QVIGNFLSFASRGDRVGLNQMLREGTSPN------VQDYDKRTALHLAASE---GHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus        14 ~g~t~l~~a~~~g~~~~~~~ll~~ga~~n------~~d~~g~t~lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ...++|+.|+..|+.+.+..++..|++++      ..|..|+||||+|+..   |+.+++++|+++|+++|.+|..|.||
T Consensus       129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~Tp  208 (278)
T 1dcq_A          129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTA  208 (278)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCH
T ss_pred             hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCH
Confidence            45688999999999999999999999954      4588999999999999   89999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++.+..+.
T Consensus       209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~  236 (278)
T 1dcq_A          209 LHYCCLTDNAECLKLLLRGKASIEIANE  236 (278)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCccC
Confidence            9999999999999999999998776664

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.52  E-value=1.5e-14  Score=112.13  Aligned_cols=70  Identities=31%  Similarity=0.346  Sum_probs=66.7

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN   73 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~   73 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++
T Consensus        24 ~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           24 AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            4667788999999999999999999999999999999999999999999999999999999999999985

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.48  E-value=1.5e-14  Score=139.40  Aligned_cols=109  Identities=20%  Similarity=0.106  Sum_probs=94.5

Q ss_pred             CccCCCCCCcccchHHHHHHH---cCCHHHHHHHHHcC-CCCCCcCCCCChHhHHHHH----cCCHHHHHHhhccCC---
Q 039021            4 DAAASGDFDMQVIGNFLSFAS---RGDRVGLNQMLREG-TSPNVQDYDKRTALHLAAS----EGHAPIVELLLQYKA---   72 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~---~g~~~~~~~ll~~g-a~~n~~d~~g~t~lh~A~~----~g~~~~v~~Ll~~ga---   72 (464)
                      -+++.+..|.+|.||||+|+.   ..+.++++.|++.+ +++|.+|..|+||||+|+.    .|+.+++++|++.++   
T Consensus       153 ~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~  232 (327)
T 1sw6_A          153 HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWI  232 (327)
T ss_dssp             TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHH
Confidence            467788889999999999998   45556677778775 7899999999999999998    899999999987754   


Q ss_pred             ------------------------------------------CcccccCCCCCHHHHHHhcCchHHHHHHhcccCccccc
Q 039021           73 ------------------------------------------NLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIH  110 (464)
Q Consensus        73 ------------------------------------------~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~  110 (464)
                                                                +++.+|..|.||||+|+..|+.+++++|+++|++.+..
T Consensus       233 ~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~  312 (327)
T 1sw6_A          233 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA  312 (327)
T ss_dssp             HHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred             hcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence                                                      68889999999999999999999999999999988776


Q ss_pred             cC
Q 039021          111 DQ  112 (464)
Q Consensus       111 ~~  112 (464)
                      +.
T Consensus       313 d~  314 (327)
T 1sw6_A          313 NK  314 (327)
T ss_dssp             CT
T ss_pred             CC
Confidence            65

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.46  E-value=7.6e-15  Score=143.70  Aligned_cols=95  Identities=18%  Similarity=0.117  Sum_probs=70.2

Q ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCccc--ccCCCCCH
Q 039021           10 DFDMQVIGNFLSFASRGDRVGLNQMLREGTS---PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL--KDRWQRTP   84 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~---~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~tp   84 (464)
                      ..|..|.||||+||..|+.++++.|+++|+|   ++..+.+ +||||+||..|+.++|++|+++|++++.  +|..|.||
T Consensus       123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~Tp  201 (376)
T 2aja_A          123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA  201 (376)
T ss_dssp             --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred             HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCH
Confidence            4556777888888888888888888888865   2222222 7888888888888888888888888776  77777888


Q ss_pred             HHHHH-hcCchHHHHHHhcccC
Q 039021           85 LTDAR-LYGHRDICRILEVNGG  105 (464)
Q Consensus        85 l~~A~-~~g~~~iv~~L~~~g~  105 (464)
                      ||+|+ ..|+.+++++|+++|+
T Consensus       202 L~~Aa~~~G~~eiv~~Ll~~ga  223 (376)
T 2aja_A          202 FRWAAVGRGHHNVINFLLDCPV  223 (376)
T ss_dssp             HHHHHSTTCCHHHHHHHTTSHH
T ss_pred             HHHHHHHCCCHHHHHHHHhCCC
Confidence            88888 8888888888887664

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.37  E-value=4.4e-13  Score=124.61  Aligned_cols=119  Identities=11%  Similarity=0.081  Sum_probs=85.5

Q ss_pred             cccccccccceeeeeEEeEE--eCce--EEEEEeeccCCc---------------------hHHHHHhHHHH-HHHHhcC
Q 039021          134 TLHSSMVEQGVFGESQTAKW--RGTW--VVKTVIKSHIYH---------------------PVKMVLSAKDN-CKLRELR  187 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~--~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~e-~~l~~l~  187 (464)
                      |.+.+.||+|+||.||+|.+  .|+.  ||+|+++.....                     .......+.+| ++|+++.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            66778999999999999998  5888  999997653211                     01122357788 9999998


Q ss_pred             CCce--eeeeceeeeCCceEEEEEecCC-C----ChHHHHhhccCCCHHHHHHHHHHHHh-------------------h
Q 039021          188 HPNI--LQFLGSIVLGEEMILITEYLPK-G----NLKGILSKKVRLDLPTALRYALDIAR-------------------N  241 (464)
Q Consensus       188 hpnI--v~~~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------N  241 (464)
                      |++|  .++++.    +..+|||||+.+ |    +|.++...   .++.++..++.|++.                   |
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N  201 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN  201 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence            8754  344432    357899999942 4    67666542   234566677777764                   9


Q ss_pred             hcccCCCceeEecchhhhhh
Q 039021          242 LLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       242 ill~~~~~~kl~DFG~a~~~  261 (464)
                      ||++.  .+||+|||+|...
T Consensus       202 ILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          202 IMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EEESS--SEEECCCTTCEET
T ss_pred             EEEcC--cEEEEECcccccC
Confidence            99988  8999999999754

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.34  E-value=2.4e-13  Score=133.06  Aligned_cols=97  Identities=18%  Similarity=0.095  Sum_probs=79.3

Q ss_pred             CcccchHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCc---ccccCCCCCHH
Q 039021           12 DMQVIGNFLSFASRGDRVGLNQMLREGTS---PNVQDYDKRTALHLAASEGHAPIVELLLQYKANL---NLKDRWQRTPL   85 (464)
Q Consensus        12 d~~g~t~l~~a~~~g~~~~~~~ll~~ga~---~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~tpl   85 (464)
                      +.++.||||+||..|+.++++.|++.|+.   .+..|..|+||||+||..|+.++|++|+++|+++   +..+.. .|||
T Consensus        89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL  167 (376)
T 2aja_A           89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF  167 (376)
T ss_dssp             TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred             CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence            44678999999999999999999999983   2234456889999999999999999999999762   333333 8999


Q ss_pred             HHHHhcCchHHHHHHhcccCcccc
Q 039021           86 TDARLYGHRDICRILEVNGGKDFI  109 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~~~  109 (464)
                      |+|+..|+.+++++|+++|++...
T Consensus       168 h~Aa~~G~~eiv~~Ll~~ga~~~~  191 (376)
T 2aja_A          168 RLAAENGHLHVLNRLCELAPTEAT  191 (376)
T ss_dssp             HHHHHTTCHHHHHHHHHSCGGGHH
T ss_pred             HHHHHCCCHHHHHHHHHcCCccch
Confidence            999999999999999999987543

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.23  E-value=1.1e-11  Score=99.09  Aligned_cols=64  Identities=20%  Similarity=0.230  Sum_probs=60.5

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHh
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELL   67 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~L   67 (464)
                      .+++.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|
T Consensus        46 ~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           46 NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence            3566788899999999999999999999999999999999999999999999999999999987

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.99  E-value=3.9e-11  Score=116.45  Aligned_cols=119  Identities=13%  Similarity=0.044  Sum_probs=75.3

Q ss_pred             cccccccccceeeeeEEeEE-eCceEEEEEeeccCCc---------------hHH----HHHhHHHH-HHHHhcCCCcee
Q 039021          134 TLHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYH---------------PVK----MVLSAKDN-CKLRELRHPNIL  192 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------~~~----~~~~~~~e-~~l~~l~hpnIv  192 (464)
                      |.+++.||+|+||.||+|.+ +|+.||||+++.....               ...    .......| ..|.++.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            88999999999999999997 4999999998643111               000    00112345 556666443332


Q ss_pred             eeeceeeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC------
Q 039021          193 QFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD------  248 (464)
Q Consensus       193 ~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~------  248 (464)
                      - ...+.. ...+|||||++|++|.++...      .....++.|++.                  |||+++++      
T Consensus       177 v-p~p~~~-~~~~LVME~i~G~~L~~l~~~------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~  248 (397)
T 4gyi_A          177 V-PEPIAQ-SRHTIVMSLVDALPMRQVSSV------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPS  248 (397)
T ss_dssp             C-CCEEEE-ETTEEEEECCSCEEGGGCCCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTT
T ss_pred             C-Ceeeec-cCceEEEEecCCccHhhhccc------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCccccc
Confidence            1 111111 224799999999888665421      223345556654                  99998876      


Q ss_pred             ----ceeEecchhhhh
Q 039021          249 ----HLKIGEYWVQMF  260 (464)
Q Consensus       249 ----~~kl~DFG~a~~  260 (464)
                          .+.|+||+-+..
T Consensus       249 ~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          249 SITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SEEEEEEECCCTTCEE
T ss_pred             ccccceEEEEeCCccc
Confidence                388999986644

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.31  E-value=7.8e-07  Score=82.21  Aligned_cols=84  Identities=6%  Similarity=-0.213  Sum_probs=68.2

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +|++...++.|+.+.||++...++.+++|+......   .....+..| ++|+.+. +..+.++++++.+.+..|+||||
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             cceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            477778889899999999987788999999875311   112357888 8888884 67788999999988899999999


Q ss_pred             cCCCChHHH
Q 039021          211 LPKGNLKGI  219 (464)
Q Consensus       211 ~~~g~L~~~  219 (464)
                      ++|.+|.+.
T Consensus        92 i~G~~l~~~  100 (263)
T 3tm0_A           92 ADGVLCSEE  100 (263)
T ss_dssp             CSSEEHHHH
T ss_pred             cCCeehhhc
Confidence            999998765

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.03  E-value=3.1e-06  Score=80.03  Aligned_cols=73  Identities=8%  Similarity=-0.093  Sum_probs=50.5

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCc--eeeeeceeeeCC---ceEEEEEe
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPN--ILQFLGSIVLGE---EMILITEY  210 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpn--Iv~~~~~~~~~~---~~~lv~E~  210 (464)
                      +.++.|....||+..   ..+++|+...     ......+..| ++|+.+. +..  +.+++......+   ..|+|||+
T Consensus        26 ~~~~~G~~n~v~~v~---~~~vlR~~~~-----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN---RDFIFKFPKH-----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CEEEECSSEEEEEST---TSEEEEEESS-----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             EecCCCCcceEEEEC---CEEEEEecCC-----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            468999999999864   5688888654     2345678888 9998873 322  445555443333   34889999


Q ss_pred             cCCCChHH
Q 039021          211 LPKGNLKG  218 (464)
Q Consensus       211 ~~~g~L~~  218 (464)
                      ++|.+|.+
T Consensus        98 i~G~~l~~  105 (304)
T 3sg8_A           98 IKGVPLTP  105 (304)
T ss_dssp             CCCEECCH
T ss_pred             cCCeECCc
Confidence            99988764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.98  E-value=8.3e-06  Score=74.85  Aligned_cols=72  Identities=11%  Similarity=-0.024  Sum_probs=54.8

Q ss_pred             cccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc--eeeeeceeeeCCceEEEEEecCCCC
Q 039021          140 VEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN--ILQFLGSIVLGEEMILITEYLPKGN  215 (464)
Q Consensus       140 lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn--Iv~~~~~~~~~~~~~lv~E~~~~g~  215 (464)
                      .+.|..+.||++... |..+++|+....      ....+..| .+++.+.+.+  +.+++++...++..++||||++|.+
T Consensus        28 ~~gg~~~~v~~~~~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~  101 (264)
T 1nd4_A           28 TIGCSDAAVFRLSAQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD  101 (264)
T ss_dssp             SCTTSSCEEEEEECTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             ccCCCCceEEEEecCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcc
Confidence            346667999999764 678999997653      12356778 8888885433  6678988888888999999999988


Q ss_pred             hH
Q 039021          216 LK  217 (464)
Q Consensus       216 L~  217 (464)
                      |.
T Consensus       102 l~  103 (264)
T 1nd4_A          102 LL  103 (264)
T ss_dssp             TT
T ss_pred             cC
Confidence            74

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.95  E-value=2e-05  Score=76.35  Aligned_cols=79  Identities=9%  Similarity=-0.009  Sum_probs=57.1

Q ss_pred             ccccccceeeeeEEeEEeCceEEEEEee--ccCCchHHHHHhHHHH-HHHHhcC--CCceeeeeceeeeC---CceEEEE
Q 039021          137 SSMVEQGVFGESQTAKWRGTWVVKTVIK--SHIYHPVKMVLSAKDN-CKLRELR--HPNILQFLGSIVLG---EEMILIT  208 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e-~~l~~l~--hpnIv~~~~~~~~~---~~~~lv~  208 (464)
                      .+.|+.|.++.||+....+..+++|+..  ....  ......+.+| .+++.|.  +..+.+++.++.+.   +..|+||
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            3578999999999998877888898876  3211  1223467788 9999886  45688999888776   4589999


Q ss_pred             EecCCCChH
Q 039021          209 EYLPKGNLK  217 (464)
Q Consensus       209 E~~~~g~L~  217 (464)
                      ||++|..+.
T Consensus       121 e~v~G~~l~  129 (359)
T 3dxp_A          121 EFVSGRVLW  129 (359)
T ss_dssp             ECCCCBCCC
T ss_pred             EecCCeecC
Confidence            999998773

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.35  E-value=0.001  Score=58.39  Aligned_cols=118  Identities=14%  Similarity=0.106  Sum_probs=75.0

Q ss_pred             ChHHHHhh-ccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccCCCCcCCCCc
Q 039021          215 NLKGILSK-KVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRN  274 (464)
Q Consensus       215 ~L~~~l~~-~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y  274 (464)
                      +|.++|+. ..++++++++.++.|.++                   .|++..+|.|...+ +.         .......+
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~---------s~~~~~~~  103 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AA---------DDAGEPPP  103 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cc---------ccccccCC
Confidence            68899975 579999999999999987                   33344444443332 10         11123456


Q ss_pred             ccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHccc--------
Q 039021          275 DNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK--------  346 (464)
Q Consensus       275 ~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~--------  346 (464)
                      .+||... ...+.+.=|||||+++|..+--..|                  .-....+|+.+.+||..|...        
T Consensus       104 ~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~------------------e~eE~eLS~~LE~LL~~Mt~~~~d~~~~D  164 (229)
T 2yle_A          104 VAGKLGY-SQCMETEVIESLGIIIYKALDYGLK------------------ENEERELSPPLEQLIDHMANTVEADGSND  164 (229)
T ss_dssp             ---CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC------------------TTEEECCCHHHHHHHHHHTTCCC------
T ss_pred             CChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC------------------cccchhhCHHHHHHHHHHHhccccccccc
Confidence            7888764 3445778899999999998842211                  112255899999999999766        


Q ss_pred             -----------------CCCCCCCHHHHHHHH
Q 039021          347 -----------------DPSKRPTFAAVIITL  361 (464)
Q Consensus       347 -----------------dp~~Rpt~~~i~~~l  361 (464)
                                       .+..|+++++|++.-
T Consensus       165 eG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C  196 (229)
T 2yle_A          165 EGYEAAEEGLGDEDEKRKISAIRSYRDVMKLC  196 (229)
T ss_dssp             --------------CCSCCCCCCSHHHHHHHH
T ss_pred             ccccccccccccccccccccCcCCHHHHHHHH
Confidence                             245788899987653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.25  E-value=0.00093  Score=61.48  Aligned_cols=76  Identities=14%  Similarity=0.052  Sum_probs=55.4

Q ss_pred             ccccceee-eeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEEecCC
Q 039021          139 MVEQGVFG-ESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       139 ~lg~G~~g-~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      .+..|..| .||+....  +..+++|+-..      .....+..| ..|+.+. +--+.++++++.+++..++|||+++|
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G  104 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG  104 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence            34455555 58887653  56788998764      234467778 8888874 32377888999999999999999999


Q ss_pred             CChHHHH
Q 039021          214 GNLKGIL  220 (464)
Q Consensus       214 g~L~~~l  220 (464)
                      .++.+..
T Consensus       105 ~~~~~~~  111 (272)
T 4gkh_A          105 KTAFQVL  111 (272)
T ss_dssp             EEHHHHH
T ss_pred             ccccccc
Confidence            8876654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.77  E-value=0.007  Score=56.86  Aligned_cols=73  Identities=14%  Similarity=-0.114  Sum_probs=53.6

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCC---ceeeeeceee-eCCceEEEEEecC
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHP---NILQFLGSIV-LGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hp---nIv~~~~~~~-~~~~~~lv~E~~~  212 (464)
                      +.++.|....||+.   |..+++|+-..     ......+..| ++|+.+.+.   .|.+.+.+.. ..+..++||||++
T Consensus        25 ~~l~~G~~n~v~~v---g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           25 ESLGEGFRNYAILV---NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEECSSEEEEEE---TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eecCCCcceeEEEE---CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            46788888899887   67788888532     3345678889 999998652   3566666664 3456789999999


Q ss_pred             CCChHH
Q 039021          213 KGNLKG  218 (464)
Q Consensus       213 ~g~L~~  218 (464)
                      |.+|.+
T Consensus        97 G~~l~~  102 (306)
T 3tdw_A           97 GQILGE  102 (306)
T ss_dssp             SEECHH
T ss_pred             CeECch
Confidence            988765

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.23  E-value=0.02  Score=55.82  Aligned_cols=100  Identities=9%  Similarity=-0.073  Sum_probs=57.6

Q ss_pred             cccccceeeeeEEeEE--eCceEEEEEeeccCC-chH---HHHHhHHHH-HHHHhcCC--C-ceeeeeceeeeCCceEEE
Q 039021          138 SMVEQGVFGESQTAKW--RGTWVVKTVIKSHIY-HPV---KMVLSAKDN-CKLRELRH--P-NILQFLGSIVLGEEMILI  207 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~---~~~~~~~~e-~~l~~l~h--p-nIv~~~~~~~~~~~~~lv  207 (464)
                      +.||.|.++.||++..  .++.|++|....... ...   ....++..| ++|+.+..  | .+.+++.+  +.+..++|
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv  113 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  113 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence            5789999999999964  468899998764211 000   112345667 78877632  3 45566653  44567899


Q ss_pred             EEecCCCCh-HHHHhhccCCCHHHHHHHHHHHHh
Q 039021          208 TEYLPKGNL-KGILSKKVRLDLPTALRYALDIAR  240 (464)
Q Consensus       208 ~E~~~~g~L-~~~l~~~~~l~~~~~~~~~~qi~~  240 (464)
                      |||+++... .+.+... ......+..+...+++
T Consensus       114 mE~l~g~~~~~~~l~~~-~~~~~~~~~l~~~La~  146 (397)
T 2olc_A          114 MEDLSHLKIARKGLIEG-ENYPHLSQHIGEFLGK  146 (397)
T ss_dssp             ECCCTTSEEHHHHHHTT-CCCTTHHHHHHHHHHH
T ss_pred             EEeCCCcchHHHHHhcC-CcCHHHHHHHHHHHHH
Confidence            999987543 3333222 2233344445555543

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=94.63  E-value=0.069  Score=50.11  Aligned_cols=73  Identities=15%  Similarity=-0.009  Sum_probs=58.5

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC---CCceeeeeceeeeCCceEEEEEecCC
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR---HPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~---hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      +.|+.|....+|+....+..+++|+....      ....+..| +.|+.|.   ...+.+++.+....+..++||||++|
T Consensus        42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           42 EKLYSGEMNEIWLINDEVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEECCSSSSEEEEEESSSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEeCCccceeeeEEEECCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            57899999999999877888999987642      13457778 8887773   35688899888888889999999999


Q ss_pred             CCh
Q 039021          214 GNL  216 (464)
Q Consensus       214 g~L  216 (464)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=92.45  E-value=0.13  Score=49.07  Aligned_cols=104  Identities=12%  Similarity=0.011  Sum_probs=65.4

Q ss_pred             cccc-ccceeeeeEEeEEe--------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-C--CceeeeeceeeeC--
Q 039021          137 SSMV-EQGVFGESQTAKWR--------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-H--PNILQFLGSIVLG--  201 (464)
Q Consensus       137 ~~~l-g~G~~g~V~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-h--pnIv~~~~~~~~~--  201 (464)
                      .+.| +.|....+|+....        +..+++|+..............+..| .+|+.|. +  -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3567 88999999998765        77889998764210000001345667 7777763 2  3577788877655  


Q ss_pred             -CceEEEEEecCCCChHHHHhhc------cCCCHHHHHHHHHHHHh
Q 039021          202 -EEMILITEYLPKGNLKGILSKK------VRLDLPTALRYALDIAR  240 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~  240 (464)
                       +..++||||++|..+.+.+...      ..++..+...++.++++
T Consensus       105 ~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  150 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVA  150 (357)
T ss_dssp             TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHH
T ss_pred             cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHH
Confidence             3568999999998876543110      13556555556666654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=91.23  E-value=0.61  Score=43.45  Aligned_cols=74  Identities=11%  Similarity=-0.054  Sum_probs=42.4

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCC--ceeeeece------eeeCCceEEEE
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHP--NILQFLGS------IVLGEEMILIT  208 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hp--nIv~~~~~------~~~~~~~~lv~  208 (464)
                      +.|+.|....+|+....+..+++|+.....     ....+..| .+++.|...  .+.+++..      ....+..+++|
T Consensus        28 ~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~  102 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTTKDPLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI  102 (322)
T ss_dssp             EEECC---EEEEEEEESSCCEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred             eccCCCcccceEEEEeCCccEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence            567788889999998765578899887521     11234445 555555211  13343321      12345678999


Q ss_pred             EecCCCCh
Q 039021          209 EYLPKGNL  216 (464)
Q Consensus       209 E~~~~g~L  216 (464)
                      ||++|..+
T Consensus       103 ~~l~G~~~  110 (322)
T 2ppq_A          103 SFLEGMWL  110 (322)
T ss_dssp             ECCCCBCC
T ss_pred             EeCCCcCC
Confidence            99998653

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.80  E-value=0.045  Score=54.45  Aligned_cols=62  Identities=11%  Similarity=-0.104  Sum_probs=18.6

Q ss_pred             ccccccccceeeeeEEeEEeC--ceEEE------EEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          135 LHSSMVEQGVFGESQTAKWRG--TWVVK------TVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~~~--~~vav------K~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      .+.+.||   ||+||+|.+++  .+||+      |..+..... .+....+.++ .+++.++|||+++.+++-..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEEe
Confidence            3456676   99999999964  58888      766643222 2334456777 88899999999999886653

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=89.72  E-value=0.64  Score=45.38  Aligned_cols=100  Identities=14%  Similarity=-0.072  Sum_probs=56.2

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCC--chH----HHHHhHHHH--HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIY--HPV----KMVLSAKDN--CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~--~~~----~~~~~~~~e--~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +.||.|..+.||++...+..+++|.......  ...    .....+..|  ..+.......+.+++.+.  .+..++|||
T Consensus        40 ~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~e  117 (420)
T 2pyw_A           40 KEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGMR  117 (420)
T ss_dssp             EECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEEC
T ss_pred             EEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEEe
Confidence            5788999999999977678899994332110  000    011222233  223333345677777665  566799999


Q ss_pred             ec-CCC-ChHHHHhhccCCCHHHHHHHHHHHHh
Q 039021          210 YL-PKG-NLKGILSKKVRLDLPTALRYALDIAR  240 (464)
Q Consensus       210 ~~-~~g-~L~~~l~~~~~l~~~~~~~~~~qi~~  240 (464)
                      |+ ++. .+.+.+... ......+..+...+++
T Consensus       118 ~l~~g~~~l~~~l~~~-~~~~~~~~~lg~~La~  149 (420)
T 2pyw_A          118 YLEPPHIILRKGLIAG-IEYPFLADHMSDYMAK  149 (420)
T ss_dssp             CCCTTCEEHHHHHHHT-CCCTTHHHHHHHHHHH
T ss_pred             ecCCcchhHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence            99 873 344444322 2223344455555554

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=89.16  E-value=2  Score=40.10  Aligned_cols=73  Identities=11%  Similarity=0.032  Sum_probs=41.4

Q ss_pred             cccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC--CCceeeeec------eeeeCCceEEEE
Q 039021          138 SMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR--HPNILQFLG------SIVLGEEMILIT  208 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~--hpnIv~~~~------~~~~~~~~~lv~  208 (464)
                      +.|+.|..+.||+....+..+++|+....    ..   .+..| .+++.|.  .-.+.+++.      +....+..++||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~~----~~---~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~  110 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGAVCLKRIHRP----EK---KALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY  110 (346)
T ss_dssp             EECC----CEEEEEEETTEEEEEEEECSC----HH---HHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred             eeccccccCcEEEEEeCCCCEEEEecCCC----HH---HHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence            35666788999999876666899998752    11   22233 3333332  112334333      123466789999


Q ss_pred             EecCCCChH
Q 039021          209 EYLPKGNLK  217 (464)
Q Consensus       209 E~~~~g~L~  217 (464)
                      ||++|.++.
T Consensus       111 ~~i~G~~~~  119 (346)
T 2q83_A          111 DWIEGRPFE  119 (346)
T ss_dssp             ECCCCBCCC
T ss_pred             EeecCccCC
Confidence            999987653

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=89.06  E-value=0.33  Score=44.63  Aligned_cols=74  Identities=11%  Similarity=-0.059  Sum_probs=50.9

Q ss_pred             cccccccceeeeeEEeEE-eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC---CceeeeeceeeeCCceEEEEEe
Q 039021          136 HSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH---PNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       136 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h---pnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      -.+.+|.|..+.||+... +|+.|++|+........   ...+..| +.|+.|.-   --+.+++++.    .-++||||
T Consensus        19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~   91 (288)
T 3f7w_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW   91 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred             EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---hhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence            346889999999999997 48999999876432211   2346778 88887742   1245555532    34789999


Q ss_pred             cCCCCh
Q 039021          211 LPKGNL  216 (464)
Q Consensus       211 ~~~g~L  216 (464)
                      ++++..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            987653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=87.80  E-value=0.61  Score=44.86  Aligned_cols=71  Identities=15%  Similarity=0.023  Sum_probs=40.9

Q ss_pred             cccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEE
Q 039021          138 SMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~l  206 (464)
                      +.|..|--..+|++...         +..+++|+.....    .....+.+| ++++.|. +.-..++++.+.+    .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence            46777888888988763         3678888864311    112334467 7777663 3334667766643    28


Q ss_pred             EEEecCCCCh
Q 039021          207 ITEYLPKGNL  216 (464)
Q Consensus       207 v~E~~~~g~L  216 (464)
                      ||||++|.+|
T Consensus       128 v~e~i~G~~l  137 (379)
T 3feg_A          128 LEQYIPSRPL  137 (379)
T ss_dssp             EEECCSEEEC
T ss_pred             EEEEecCccC
Confidence            9999998665

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=82.13  E-value=1.2  Score=40.98  Aligned_cols=70  Identities=10%  Similarity=0.035  Sum_probs=41.3

Q ss_pred             ccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc-eeeeeceeeeCCceEEEEEec-CC
Q 039021          137 SSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN-ILQFLGSIVLGEEMILITEYL-PK  213 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn-Iv~~~~~~~~~~~~~lv~E~~-~~  213 (464)
                      .+.|+.|....+|+.    ..+++|+.....    ........| .+++.+..-. ..++++.+  .+.-++|+||+ +|
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~----~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g   92 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGT----EEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA   92 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCc----cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence            467889999999998    568888876421    111112345 5555552111 14555543  33457899999 66


Q ss_pred             CCh
Q 039021          214 GNL  216 (464)
Q Consensus       214 g~L  216 (464)
                      .+|
T Consensus        93 ~~l   95 (301)
T 3dxq_A           93 QTM   95 (301)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	464
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-27
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-24
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-24
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-23
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-23
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-23
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-22
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-22
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-22
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-21
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-21
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-21
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-21
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-21
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-21
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-21
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-20
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-20
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-19
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-19
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-19
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-18
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-17
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-16
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-16
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-14
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-07
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-07
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-15
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-14
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-14
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-07
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-14
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-12
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	8e-08
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-11
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-11
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-08
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-11
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	9e-11
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	7e-09
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	9e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-10
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-07
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-10
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	7e-04
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-10
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-09
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	7e-08
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-09
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-07
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-07
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.003
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-07
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	9e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.002
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	6e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	8e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	8e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.002

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 7e-27
 Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 28/246 (11%)

Query: 142 QGVFGESQTAKWRGTWV-VKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVL 200
           +G FG+     +RG  V VK +             S      + +LRH N++Q LG IV 
Sbjct: 17  KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASV-----MTQLRHSNLVQLLGVIVE 71

Query: 201 GEEMI-LITEYLPKGNLKGILSKKVR--LDLPTALRYALDIAR----------------- 240
            +  + ++TEY+ KG+L   L  + R  L     L+++LD+                   
Sbjct: 72  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 131

Query: 241 -NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFY 299
            N+L  E +  K+ ++ +           +   +             TK D+ SFG + +
Sbjct: 132 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 191

Query: 300 QMLE-GKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
           ++   G+          +  +            CP  + +++  C + D + RP+F  + 
Sbjct: 192 EIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLR 251

Query: 359 ITLEEV 364
             LE +
Sbjct: 252 EQLEHI 257

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 34/259 (13%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
            G FG     KW G   VK ++      P ++     +   LR+ RH NIL F+G     
Sbjct: 18  SGSFGTVYKGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTA 75

Query: 202 EEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR------------------NL 242
            ++ ++T++    +L   L   + + ++   +  A   A+                  N+
Sbjct: 76  PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNI 135

Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQR--------NDNSSIASNVLDDTKKDICSF 294
              E   +KIG++ +     +   + +  Q          +   +        + D+ +F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195

Query: 295 GYIFYQMLEGKHL---QTNNSFDFMHLKSVNFEPKFQ--ISRCPNRLKQLIAQCTNKDPS 349
           G + Y+++ G+       N       +      P      S CP  +K+L+A+C  K   
Sbjct: 196 GIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 255

Query: 350 KRPTFAAVIITLEEVSACL 368
           +RP F  ++ ++E ++  L
Sbjct: 256 ERPLFPQILASIELLARSL 274

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 5e-24
 Identities = 47/245 (19%), Positives = 83/245 (33%), Gaps = 31/245 (12%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G +GE Q A  R T     VK V         + +   K+ C  + L H N+++F G  
Sbjct: 15  EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHENVVKFYGHR 72

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
             G    L  EY   G L   +   + +  P A R+   +                    
Sbjct: 73  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 132

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQR------NDNSSIASNVLDDTKKDICSF 294
           NLL DE D+LKI ++ +   +   +  +  ++            +          D+ S 
Sbjct: 133 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 192

Query: 295 GYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRP 352
           G +   ML G+      S           +  +     +  +    L+ +   ++PS R 
Sbjct: 193 GIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI 252

Query: 353 TFAAV 357
           T   +
Sbjct: 253 TIPDI 257

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 2e-23
 Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 24/207 (11%)

Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRL-DLPTALRYALDIA-- 239
           + +L HP ++Q  G  +    + L+ E++  G L   L  +  L    T L   LD+   
Sbjct: 54  MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 113

Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
                           RN L  E   +K+ ++ +  F            +      +  V
Sbjct: 114 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 173

Query: 284 LD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQ 338
                  +K D+ SFG + +++     +   N  +   ++ ++   +    R     + Q
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 233

Query: 339 LIAQCTNKDPSKRPTFAAVIITLEEVS 365
           ++  C  + P  RP F+ ++  L E++
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQLAEIA 260

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.3 bits (239), Expect = 4e-23
 Identities = 51/252 (20%), Positives = 91/252 (36%), Gaps = 38/252 (15%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-----LRELRHPNILQFLG 196
            G FGE     + G   V   +KS     +K    + D        +++L+H  +++   
Sbjct: 23  AGQFGEVWMGYYNGHTKV--AVKS-----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75

Query: 197 SIVLGEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDIAR-------------- 240
            +V  E + +ITEY+  G+L   L     ++L +   L  A  IA               
Sbjct: 76  -VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134

Query: 241 ----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDIC 292
               N+L  +    KI ++ +    E          +      A   ++      K D+ 
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194

Query: 293 SFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
           SFG +  +++  G+      +   +           +   CP  L QL+  C  + P  R
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254

Query: 352 PTFAAVIITLEE 363
           PTF  +   LE+
Sbjct: 255 PTFDYLRSVLED 266

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 8e-23
 Identities = 39/240 (16%), Positives = 79/240 (32%), Gaps = 27/240 (11%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G F     A+   T   + +K + K HI    K+    ++   +  L HP  ++   + 
Sbjct: 18  EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 77

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
              E++     Y   G L   + K    D      Y  +I                    
Sbjct: 78  QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 137

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS-IASNVLD----DTKKDICSFG 295
           N+L +E  H++I ++               +     +  ++  +L         D+ + G
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG 197

Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFA 355
            I YQ++ G       +   +  K +  E  F   +   + + L+ +    D +KR    
Sbjct: 198 CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFFPKARDLVEKLLVLDATKRLGCE 256

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.2 bits (239), Expect = 8e-23
 Identities = 45/241 (18%), Positives = 75/241 (31%), Gaps = 24/241 (9%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG    A+         +K +  S      K     K+   L++LRHPN +Q+ G  
Sbjct: 25  HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY 84

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
           +      L+ EY        +   K  L             +                  
Sbjct: 85  LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAG 144

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD--DTKKDICSFGYIF 298
           N+L  E   +K+G++         +             I +      D K D+ S G   
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204

Query: 299 YQMLEGKH-LQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
            ++ E K  L   N+   ++  + N  P  Q        +  +  C  K P  RPT   +
Sbjct: 205 IELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264

Query: 358 I 358
           +
Sbjct: 265 L 265

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 2e-22
 Identities = 51/239 (21%), Positives = 85/239 (35%), Gaps = 23/239 (9%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FG    A+ + +     +K + K+ +          ++      LRHPNIL+  G  
Sbjct: 16  KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 75

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
                + LI EY P G +   L K  + D      Y  ++A                   
Sbjct: 76  HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 135

Query: 241 NLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFY 299
           NLL      LKI ++ W              +       +    + D K D+ S G + Y
Sbjct: 136 NLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 195

Query: 300 QMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
           + L GK     N++   + +    E  F         + LI++    +PS+RP    V+
Sbjct: 196 EFLVGKPPFEANTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLREVL 253

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 94.3 bits (234), Expect = 4e-22
 Identities = 43/248 (17%), Positives = 77/248 (31%), Gaps = 35/248 (14%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G F E   A+ + T     +K + K  +      + +      L +++HPNI+      
Sbjct: 19  TGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV--LHKIKHPNIVALDDIY 76

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
             G  + LI + +  G L   + +K       A R    +                    
Sbjct: 77  ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 136

Query: 241 ---NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICS 293
                  DE   + I ++ +    +       ++       +A  VL         D  S
Sbjct: 137 NLLYYSLDEDSKIMISDFGLSKMEDPGSVL--STACGTPGYVAPEVLAQKPYSKAVDCWS 194

Query: 294 FGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI---SRCPNRLKQLIAQCTNKDPSK 350
            G I Y +L G     + +   +  + +  E +F         +  K  I     KDP K
Sbjct: 195 IGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 254

Query: 351 RPTFAAVI 358
           R T    +
Sbjct: 255 RFTCEQAL 262

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 7e-22
 Identities = 45/253 (17%), Positives = 82/253 (32%), Gaps = 34/253 (13%)

Query: 142 QGVFGESQTAKWRGTWVVKTV-IKSHIYHPVKMVLSAKDNCK-----LRELRHPNILQFL 195
            G FG  +   ++   VVKTV +K  I        + KD        +++L +P I++ +
Sbjct: 17  SGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL------------- 242
           G I   E  +L+ E    G L   L +   +     +     ++  +             
Sbjct: 75  G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133

Query: 243 -----LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS------IASNVLDDTKKDI 291
                L     + KI ++ +           +                 +     +K D+
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 193

Query: 292 CSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
            SFG + ++    G+          +       E     + CP  +  L+  C   D   
Sbjct: 194 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 253

Query: 351 RPTFAAVIITLEE 363
           RP FAAV + L  
Sbjct: 254 RPGFAAVELRLRN 266

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.7 bits (230), Expect = 9e-22
 Identities = 40/248 (16%), Positives = 81/248 (32%), Gaps = 33/248 (13%)

Query: 142 QGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
            G FG+   A+ +         VI +     ++  +   D   L    HPNI++ L +  
Sbjct: 22  DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI--LASCDHPNIVKLLDAFY 79

Query: 200 LGEEMILITEYLPKGNLKGILSKKVR-LDLPTALRYALDIAR------------------ 240
               + ++ E+   G +  ++ +  R L                                
Sbjct: 80  YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 139

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQE--------NSQRNDNSSIASNVLDDTKKDIC 292
           N+L      +K+ ++ V     +    ++         +        + +   D K D+ 
Sbjct: 140 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 199

Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF--QISRCPNRLKQLIAQCTNKDPSK 350
           S G    +M E +      +   + LK    EP    Q SR  +  K  + +C  K+   
Sbjct: 200 SLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDA 259

Query: 351 RPTFAAVI 358
           R T + ++
Sbjct: 260 RWTTSQLL 267

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.7 bits (227), Expect = 1e-21
 Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 42/255 (16%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK--------LRELRHPNILQ 193
            G FG  +  KWRG + V           +KM+     +          +  L H  ++Q
Sbjct: 14  TGQFGVVKYGKWRGQYDVA----------IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 194 FLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------ 240
             G       + +ITEY+  G L   L   + R      L    D+              
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123

Query: 241 ------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKD 290
                 N L ++   +K+ ++ +  +            +         VL      +K D
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183

Query: 291 ICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
           I +FG + +++   GK      +              ++      ++  ++  C ++   
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 243

Query: 350 KRPTFAAVIITLEEV 364
           +RPTF  ++  + +V
Sbjct: 244 ERPTFKILLSNILDV 258

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 93.2 bits (231), Expect = 2e-21
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 32/246 (13%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG       R T   +  K V+  H      +    +    +  LRHP ++    + 
Sbjct: 36  TGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ---TMSVLRHPTLVNLHDAF 92

Query: 199 VLGEEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR----------------- 240
               EM++I E++  G L   ++ +  ++    A+ Y   + +                 
Sbjct: 93  EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 152

Query: 241 ---NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--IASNVLDDTKKDICSFG 295
                     + LK+ ++ +    +     +  +   + ++  +A         D+ S G
Sbjct: 153 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 212

Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF---QISRCPNRLKQLIAQCTNKDPSKRP 352
            + Y +L G       + D       + +        S      K  I +    DP+ R 
Sbjct: 213 VLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM 272

Query: 353 TFAAVI 358
           T    +
Sbjct: 273 TIHQAL 278

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (227), Expect = 2e-21
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 41/257 (15%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK----------LRELRHPNI 191
           +G FG+     +         +       +K   +   +            +R+  HP+I
Sbjct: 17  EGQFGDVHQGIYMSPENPALAVA------IKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIA----------- 239
           ++ +G ++    + +I E    G L+  L  +   LDL + + YA  ++           
Sbjct: 71  VKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129

Query: 240 -------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDD----TK 288
                  RN+L    D +K+G++ +  + E     + +  +     +A   ++     + 
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 189

Query: 289 KDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD 347
            D+  FG   +++L  G         + +  +  N E       CP  L  L+ +C   D
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 249

Query: 348 PSKRPTFAAVIITLEEV 364
           PS+RP F  +   L  +
Sbjct: 250 PSRRPRFTELKAQLSTI 266

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 2e-21
 Identities = 47/243 (19%), Positives = 87/243 (35%), Gaps = 28/243 (11%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKL-RELRHPNILQFLGS 197
           +G FG+   A+++ T   + +K + K  +     +  +  +   L     HP +     +
Sbjct: 12  KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT 71

Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR----------------- 240
               E +  + EYL  G+L   +    + DL  A  YA +I                   
Sbjct: 72  FQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKL 131

Query: 241 -NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFG 295
            N+L D+  H+KI ++ +          + N+       IA  +L     +   D  SFG
Sbjct: 132 DNILLDKDGHIKIADFGMCKENML-GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG 190

Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFA 355
            + Y+ML G+        + +        P +         K L+ +   ++P KR    
Sbjct: 191 VLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-RWLEKEAKDLLVKLFVREPEKRLGVR 249

Query: 356 AVI 358
             I
Sbjct: 250 GDI 252

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 2e-21
 Identities = 41/243 (16%), Positives = 90/243 (37%), Gaps = 30/243 (12%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           QG  G   TA    T     ++ +          ++        +RE ++PNI+ +L S 
Sbjct: 30  QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL---VMRENKNPNIVNYLDSY 86

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
           ++G+E+ ++ EYL  G+L  ++++   +D         +  +                  
Sbjct: 87  LVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN---SQRNDNSSIASNVLDDTKKDICSFGYI 297
           N+L      +K+ ++            +     +       + +      K DI S G +
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205

Query: 298 FYQMLEGKHL-QTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPTFA 355
             +M+EG+      N    ++L + N  P+ Q   +     +  + +C + D  KR +  
Sbjct: 206 AIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAK 265

Query: 356 AVI 358
            ++
Sbjct: 266 ELL 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 7e-21
 Identities = 45/253 (17%), Positives = 94/253 (37%), Gaps = 38/253 (15%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G +G  Q  + +      V K +    +    K +L ++ N  LREL+HPNI+++   I
Sbjct: 14  TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNL-LRELKHPNIVRYYDRI 72

Query: 199 VLGEE--MILITEYLPKGNLKGILSKKVR----LDLPTALRYALDIAR------------ 240
           +      + ++ EY   G+L  +++K  +    LD    LR    +              
Sbjct: 73  IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 132

Query: 241 -----------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD---- 285
                      N+  D   ++K+G++ +         +   +       ++   ++    
Sbjct: 133 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSPEQMNRMSY 191

Query: 286 DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN 345
           + K DI S G + Y++       T  S   +  K    + +    R  + L ++I +  N
Sbjct: 192 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLN 251

Query: 346 KDPSKRPTFAAVI 358
                RP+   ++
Sbjct: 252 LKDYHRPSVEEIL 264

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 91.3 bits (226), Expect = 8e-21
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 28/243 (11%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNC---KLRELRHPNILQFL 195
           +G FGE    +   T   + +K + K  I       L+  +      +     P I+   
Sbjct: 14  RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 73

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------- 240
            +    +++  I + +  G+L   LS+           YA +I                 
Sbjct: 74  YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL 133

Query: 241 ---NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--IASNVLDDTKKDICSFG 295
              N+L DE  H++I +  +   + +  P+         +   +   V  D+  D  S G
Sbjct: 134 KPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 193

Query: 296 YIFYQMLEGKH-LQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPT 353
            + +++L G    + + + D   +  +      ++       L+ L+     +D ++R  
Sbjct: 194 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLG 253

Query: 354 FAA 356
              
Sbjct: 254 CLG 256

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.2 bits (223), Expect = 8e-21
 Identities = 49/251 (19%), Positives = 92/251 (36%), Gaps = 32/251 (12%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G +GE     W+       VKT+ +  +   V+  L       ++E++HPN++Q LG  
Sbjct: 27  GGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAV--MKEIKHPNLVQLLGVC 82

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYALDIA----------------- 239
                  +ITE++  GNL   L +  R  +     L  A  I+                 
Sbjct: 83  TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 142

Query: 240 -RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSF 294
            RN L  E   +K+ ++ +               +      A   L       K D+ +F
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202

Query: 295 GYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDPSKRPT 353
           G + +++                 + +  + + +    CP ++ +L+  C   +PS RP+
Sbjct: 203 GVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262

Query: 354 FAAVIITLEEV 364
           FA +    E +
Sbjct: 263 FAEIHQAFETM 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 89.7 bits (222), Expect = 8e-21
 Identities = 41/256 (16%), Positives = 86/256 (33%), Gaps = 39/256 (15%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELR-------HPNI 191
           +GV    +    + T   + VK +  +         +       L+E+        HPNI
Sbjct: 13  RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 72

Query: 192 LQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR----------- 240
           +Q   +        L+ + + KG L   L++KV L      +    +             
Sbjct: 73  IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 132

Query: 241 -------NLLQDEGDHLKIGEYWVQMFYEQIH--------PNQENSQRNDNSSIASNVLD 285
                  N+L D+  ++K+ ++      +           P+    +  + S   ++   
Sbjct: 133 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY 192

Query: 286 DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF---QISRCPNRLKQLIAQ 342
             + D+ S G I Y +L G     +     M    ++   +F   +     + +K L+++
Sbjct: 193 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252

Query: 343 CTNKDPSKRPTFAAVI 358
                P KR T    +
Sbjct: 253 FLVVQPQKRYTAEEAL 268

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 1e-20
 Identities = 46/296 (15%), Positives = 98/296 (33%), Gaps = 84/296 (28%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE--------LRHPNILQ 193
           +G FGE    KWRG  V            VK+  S ++    RE        LRH NIL 
Sbjct: 13  KGRFGEVWRGKWRGEEVA-----------VKIFSSREERSWFREAEIYQTVMLRHENILG 61

Query: 194 FLGSIV----LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------- 240
           F+ +         ++ L+++Y   G+L   L++   + +   ++ AL  A          
Sbjct: 62  FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEI 120

Query: 241 -----------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRN--------- 274
                            N+L  +     I +  + + ++      + +  +         
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180

Query: 275 ----DNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--------- 321
               D+S    +     + DI + G +F+++     +   +    +    +         
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240

Query: 322 ------------NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVS 365
                       N   ++Q       + +++ +C   + + R T   +  TL ++S
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 2e-20
 Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 44/264 (16%)

Query: 142 QGVFGESQTAKWRGTW--------VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQ 193
           QG FG       +G           +KTV ++         L+      ++E    ++++
Sbjct: 30  QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV--MKEFNCHHVVR 87

Query: 194 FLGSIVLGEEMILITEYLPKGNLKGIL----------SKKVRLDLPTALRYALDIA---- 239
            LG +  G+  ++I E + +G+LK  L                 L   ++ A +IA    
Sbjct: 88  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 147

Query: 240 --------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQ-----RNDNSSIA 280
                         RN +  E   +KIG++ +     +    ++  +     R  +    
Sbjct: 148 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 207

Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQL 339
            + +  T  D+ SFG + +++            +   L+ V           CP+ L +L
Sbjct: 208 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 267

Query: 340 IAQCTNKDPSKRPTFAAVIITLEE 363
           +  C   +P  RP+F  +I +++E
Sbjct: 268 MRMCWQYNPKMRPSFLEIISSIKE 291

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 89.3 bits (221), Expect = 3e-20
 Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 32/246 (13%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG       + T   +V K +   +      +         + +L HP ++    + 
Sbjct: 39  SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS---IMNQLHHPKLINLHDAF 95

Query: 199 VLGEEMILITEYLPKGNLKG-ILSKKVRLDLPTALRYALDIAR----------------- 240
               EM+LI E+L  G L   I ++  ++     + Y                       
Sbjct: 96  EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP 155

Query: 241 ---NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--IASNVLDDTKKDICSFG 295
                   +   +KI ++ +          +  +   + ++  I          D+ + G
Sbjct: 156 ENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIG 215

Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF---QISRCPNRLKQLIAQCTNKDPSKRP 352
            + Y +L G                   + +F     S      K  I     K+P KR 
Sbjct: 216 VLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 275

Query: 353 TFAAVI 358
           T    +
Sbjct: 276 TVHDAL 281

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 6e-20
 Identities = 55/276 (19%), Positives = 100/276 (36%), Gaps = 53/276 (19%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL-----------RHPN 190
           +G FG+   A+  G    K    + +   VKM+ S      L +L           +H N
Sbjct: 23  EGAFGQVVLAEAIGLDKDKPNRVTKV--AVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80

Query: 191 ILQFLGSIVLGEEMILITEYLPKGNLKGIL----------------SKKVRLDLPTALRY 234
           I+  LG+      + +I EY  KGNL+  L                + + +L     +  
Sbjct: 81  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 140

Query: 235 ALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
           A  +AR                  N+L  E + +KI ++ +      I   ++ +     
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200

Query: 277 SS-IASNVLD----DTKKDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQIS 330
              +A   L       + D+ SFG + +++   G         + +           + S
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 260

Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
            C N L  ++  C +  PS+RPTF  ++  L+ + A
Sbjct: 261 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 7e-20
 Identities = 55/255 (21%), Positives = 89/255 (34%), Gaps = 44/255 (17%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK--------LRELRHPNILQ 193
           QG FGE     W GT  V           +K +     + +        +++LRH  ++Q
Sbjct: 27  QGCFGEVWMGTWNGTTRVA----------IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 194 FLGSIVLGEEMILITEYLPKGNL--KGILSKKVRLDLPTALRYALDIA------------ 239
               +V  E + ++TEY+ KG+L           L LP  +  A  IA            
Sbjct: 77  LYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 135

Query: 240 ------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKK 289
                  N+L  E    K+ ++ +    E          +      A           K 
Sbjct: 136 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 195

Query: 290 DICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDP 348
           D+ SFG +  ++     +      +   L  V    +      CP  L  L+ QC  K+P
Sbjct: 196 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 255

Query: 349 SKRPTFAAVIITLEE 363
            +RPTF  +   LE+
Sbjct: 256 EERPTFEYLQAFLED 270

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.5 bits (216), Expect = 8e-20
 Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 36/257 (14%)

Query: 142 QGVFGESQTAKWRGTW------VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
            G FGE  +   +          +KT+   +     +  LS      + +  HPN++   
Sbjct: 36  AGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI--MGQFDHPNVIHLE 93

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDIAR-------------- 240
           G +     +++ITE++  G+L   L +   +  +   +     IA               
Sbjct: 94  GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD 153

Query: 241 ----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS----IASNVLDD----TK 288
               N+L +     K+ ++ +  F E    +   +            A   +      + 
Sbjct: 154 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 213

Query: 289 KDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD 347
            D+ S+G + ++++  G+    + +   +               CP+ L QL+  C  KD
Sbjct: 214 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKD 273

Query: 348 PSKRPTFAAVIITLEEV 364
            + RP F  ++ TL+++
Sbjct: 274 RNHRPKFGQIVNTLDKM 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 1e-19
 Identities = 45/287 (15%), Positives = 100/287 (34%), Gaps = 52/287 (18%)

Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
           +    V    S L    + ++ +G FG             K          VK +    D
Sbjct: 15  QAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA------VKSLNRITD 68

Query: 180 NCK----------LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILS-KKVRLD 227
             +          +++  HPN+L  LG  +  E   +++  Y+  G+L+  +  +     
Sbjct: 69  IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT 128

Query: 228 LPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQE 269
           +   + + L +A+                  N + DE   +K+ ++        ++  + 
Sbjct: 129 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEF 185

Query: 270 NSQRNDNSSIAS----------NVLDDTKKDICSFGYIFYQMLEGKHL--QTNNSFDFMH 317
           +S  N   +                  TK D+ SFG + ++++          N+FD   
Sbjct: 186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245

Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              +      Q   CP+ L +++ +C +     RP+F+ ++  +  +
Sbjct: 246 -YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 86.3 bits (213), Expect = 1e-19
 Identities = 39/252 (15%), Positives = 77/252 (30%), Gaps = 34/252 (13%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G   E   A+         VK +       P   +   ++      L HP I+    + 
Sbjct: 17  FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 76

Query: 199 V----LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL--LQDEG----- 247
                 G    ++ EY+    L+ I+  +  +    A+    D  + L      G     
Sbjct: 77  EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRD 136

Query: 248 ---DHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD--------------DTKKD 290
               ++ I         +           N  +  A+ +                D + D
Sbjct: 137 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 196

Query: 291 ICSFGYIFYQMLEGKHLQTNNSFD---FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD 347
           + S G + Y++L G+   T +S     + H++     P  +       L  ++ +   K+
Sbjct: 197 VYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256

Query: 348 PSKRPTFAAVII 359
           P  R   AA + 
Sbjct: 257 PENRYQTAAEMR 268

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 1e-19
 Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 35/255 (13%)

Query: 142 QGVFGESQTAKWRGTW-------VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQF 194
            G FGE      + +         +KT+   +        L       + +  H NI++ 
Sbjct: 17  AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI--MGQFSHHNIIRL 74

Query: 195 LGSIVLGEEMILITEYLPKG-NLKGILSKKVRLDLPTALRYALDIA-------------- 239
            G I   + M++ITEY+  G   K +  K     +   +     IA              
Sbjct: 75  EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 134

Query: 240 ----RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS------SIASNVLDDTKK 289
               RN+L +     K+ ++ +    E        +               S     +  
Sbjct: 135 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS 194

Query: 290 DICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDP 348
           D+ SFG + ++++           +   +K++N   +      CP+ + QL+ QC  ++ 
Sbjct: 195 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 254

Query: 349 SKRPTFAAVIITLEE 363
           ++RP FA ++  L++
Sbjct: 255 ARRPKFADIVSILDK 269

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 2e-19
 Identities = 54/256 (21%), Positives = 91/256 (35%), Gaps = 34/256 (13%)

Query: 142 QGVFGESQTAKWRGT------WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
            G FG  +  +W           VK +    +  P  M    ++   +  L H N+++  
Sbjct: 18  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77

Query: 196 GSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIAR-------------- 240
           G +VL   M ++TE  P G+L   +   +    L T  RYA+ +A               
Sbjct: 78  G-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 136

Query: 241 ----NLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKD 290
               NLL    D +KIG++ +   +     H   +  ++   +  A   L         D
Sbjct: 137 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 196

Query: 291 ICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDP 348
              FG   ++M   G+      +   +  K      +      CP  +  ++ QC    P
Sbjct: 197 TWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256

Query: 349 SKRPTFAAVIITLEEV 364
             RPTF A+   L E 
Sbjct: 257 EDRPTFVALRDFLLEA 272

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 2e-19
 Identities = 50/276 (18%), Positives = 92/276 (33%), Gaps = 58/276 (21%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK----LREL-------RHPN 190
            G FG+        T        + +   VKM+  +    +    + EL        H N
Sbjct: 33  AGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 191 ILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------------------VRLDLPTAL 232
           I+  LG+  +G   ++ITEY   G+L   L +K                  + LDL   L
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148

Query: 233 RYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQ-- 272
            ++  +A+                  N+L   G   KI ++ +    +            
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208

Query: 273 ---RNDNSSIASNVLDDTKKDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQ 328
              +        N +   + D+ S+G   +++   G         D    K +    +  
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268

Query: 329 I-SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
                P  +  ++  C + DP KRPTF  ++  +E+
Sbjct: 269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 3e-19
 Identities = 39/245 (15%), Positives = 76/245 (31%), Gaps = 33/245 (13%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FG         +   ++ K V           VL  K+   L   RH NIL    S 
Sbjct: 15  RGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ----VLVKKEISILNIARHRNILHLHESF 70

Query: 199 VLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR----------------- 240
              EE+++I E++   ++   + +    L+    + Y   +                   
Sbjct: 71  ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP 130

Query: 241 -NLL--QDEGDHLKIGEY--WVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
            N++        +KI E+    Q+           +       +  + +  T  D+ S G
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG 190

Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF---QISRCPNRLKQLIAQCTNKDPSKRP 352
            + Y +L G +     +   +    +N E  F               + +   K+   R 
Sbjct: 191 TLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM 250

Query: 353 TFAAV 357
           T +  
Sbjct: 251 TASEA 255

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 6e-19
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 34/253 (13%)

Query: 142 QGVFGESQTAKWRGTW-----VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
            G FG  +   +R         +K + +       + ++       + +L +P I++ +G
Sbjct: 19  CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI--MHQLDNPYIVRLIG 76

Query: 197 SIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR--------------- 240
                E ++L+ E    G L   L  K+  + +         ++                
Sbjct: 77  VCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135

Query: 241 ---NLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDI 291
              N+L     + KI ++ +   +  +  +    ++ +      A   ++     ++ D+
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 195

Query: 292 CSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
            S+G   ++ L  G+          +       +       CP  L  L++ C       
Sbjct: 196 WSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWED 255

Query: 351 RPTFAAVIITLEE 363
           RP F  V   +  
Sbjct: 256 RPDFLTVEQRMRA 268

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.5 bits (208), Expect = 8e-19
 Identities = 47/278 (16%), Positives = 86/278 (30%), Gaps = 58/278 (20%)

Query: 142 QGVFGESQTAKWRGTW--------VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQ 193
           +G FG    A+  G           VK + +                  + E  +PNI++
Sbjct: 23  EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL--MAEFDNPNIVK 80

Query: 194 FLGSIVLGEEMILITEYLPKGNLKGILSK------------------------KVRLDLP 229
            LG   +G+ M L+ EY+  G+L   L                             L   
Sbjct: 81  LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 140

Query: 230 TALRYALDIA------------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENS 271
             L  A  +A                  RN L  E   +KI ++ +          + + 
Sbjct: 141 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADG 200

Query: 272 Q-----RNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHLKSVNFEP 325
                 R             T+ D+ ++G + +++   G       + + +     +   
Sbjct: 201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 260

Query: 326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
                 CP  L  L+  C +K P+ RP+F ++   L+ 
Sbjct: 261 LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 298

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 1e-18
 Identities = 48/272 (17%), Positives = 88/272 (32%), Gaps = 57/272 (20%)

Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL-----------RHPN 190
           +G FG+   A+ +   +            +K +         R+             HPN
Sbjct: 20  EGNFGQVLKARIKKDGLRMDAA-------IKRMKEYASKDDHRDFAGELEVLCKLGHHPN 72

Query: 191 ILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV----------------RLDLPTALRY 234
           I+  LG+      + L  EY P GNL   L K                   L     L +
Sbjct: 73  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 132

Query: 235 ALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN--SQRN 274
           A D+AR                  N+L  E    KI ++ +    E            R 
Sbjct: 133 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 192

Query: 275 DNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL--QTNNSFDFMHLKSVNFEPKFQISRC 332
                 +  +  T  D+ S+G + ++++             +        +  +     C
Sbjct: 193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-PLNC 251

Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
            + +  L+ QC  + P +RP+FA ++++L  +
Sbjct: 252 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 283

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 3e-18
 Identities = 38/285 (13%), Positives = 80/285 (28%), Gaps = 74/285 (25%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G  G       + +      K +           ++       L E   P I+ F G+ 
Sbjct: 16  AGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV--LHECNSPYIVGFYGAF 73

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
               E+ +  E++  G+L  +L K  R+      + ++ + +                  
Sbjct: 74  YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133

Query: 241 -NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFG 295
            N+L +    +K+ ++ V     Q+  +  NS     S ++   L       + DI S G
Sbjct: 134 SNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190

Query: 296 YIFYQMLEGKH-------------------------------------------LQTNNS 312
               +M  G++                                                 
Sbjct: 191 LSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAI 250

Query: 313 FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
           F+ +        PK          +  + +C  K+P++R     +
Sbjct: 251 FELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 3e-18
 Identities = 47/250 (18%), Positives = 88/250 (35%), Gaps = 33/250 (13%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSA---KDNCKLRELRHPNILQFL 195
            G F   +  + + T   +  K + K       + V      ++   L+E++HPN++   
Sbjct: 20  SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 79

Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARN-------------- 241
                  ++ILI E +  G L   L++K  L    A  +   I                 
Sbjct: 80  EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 139

Query: 242 -----LLQDEGD---HLKIGEYWVQMFYEQIHPNQENSQRNDNSS--IASNVLDDTKKDI 291
                +L D       +KI ++ +    +  +  +      +  +  I +      + D+
Sbjct: 140 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 199

Query: 292 CSFGYIFYQMLEGKH--LQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQCTNKDP 348
            S G I Y +L G    L         ++ +VN+E + +  S      K  I +   KDP
Sbjct: 200 WSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 259

Query: 349 SKRPTFAAVI 358
            KR T    +
Sbjct: 260 KKRMTIQDSL 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 3e-18
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 27/247 (10%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FG+    + + T   + +K + K  I    ++  +  ++  L+  RHP +     + 
Sbjct: 15  KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
              + +  + EY   G L   LS++       A  Y  +I                    
Sbjct: 75  QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134

Query: 241 NLLQDEGDHLKIGEYWV---QMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYI 297
           NL+ D+  H+KI ++ +    +           +       +  +       D    G +
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194

Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
            Y+M+ G+    N   + +    +  E +F         K L+A    KDP +R      
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKDPKQRLGGGP- 252

Query: 358 IITLEEV 364
               +EV
Sbjct: 253 -SDAKEV 258

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 4e-18
 Identities = 55/320 (17%), Positives = 93/320 (29%), Gaps = 66/320 (20%)

Query: 109 IHDQPLTVRNEKDSNEVNFDISELNTLHSSMVE-----------QGVFGESQTAKWRGTW 157
              Q + V    D+     D  E                      G FG+   A   G  
Sbjct: 3   SQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGIS 62

Query: 158 VVKTVIKSHIYHPVKMVLSAKDNCKLREL-------RHPNILQFLGSIVLGEEMILITEY 210
                I+  +    +   S++    + EL        H NI+  LG+  L   + LI EY
Sbjct: 63  KTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY 122

Query: 211 LPKGNLKGILSKK-----------------------VRLDLPTALRYALDIAR------- 240
              G+L   L  K                         L     L +A  +A+       
Sbjct: 123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 182

Query: 241 -----------NLLQDEGDHLKIGEYWV-QMFYEQIHPNQENSQRNDNSSIASNVLD--- 285
                      N+L   G  +KI ++ + +      +     + R     +A   L    
Sbjct: 183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 242

Query: 286 -DTKKDICSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQI-SRCPNRLKQLIAQ 342
              K D+ S+G + +++   G +       D    K +    K          +  ++  
Sbjct: 243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS 302

Query: 343 CTNKDPSKRPTFAAVIITLE 362
           C   D  KRP+F  +   L 
Sbjct: 303 CWAFDSRKRPSFPNLTSFLG 322

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 4e-18
 Identities = 34/250 (13%), Positives = 81/250 (32%), Gaps = 37/250 (14%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS- 197
           +G F          T        +    +    +     +    L+ L+HPNI++F  S 
Sbjct: 19  RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM-LKGLQHPNIVRFYDSW 77

Query: 198 ---IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------- 240
              +   + ++L+TE +  G LK  L +   + +     +   I +              
Sbjct: 78  ESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIH 137

Query: 241 -------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD---DTKKD 290
                    +      +KIG+  +         +   +       +A  + +   D   D
Sbjct: 138 RDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPEFMAPEMYEEKYDESVD 194

Query: 291 ICSFGYIFYQMLEGKHL--QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP 348
           + +FG    +M   ++   +  N+       +   +P          +K++I  C  ++ 
Sbjct: 195 VYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNK 254

Query: 349 SKRPTFAAVI 358
            +R +   ++
Sbjct: 255 DERYSIKDLL 264

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.3 bits (200), Expect = 1e-17
 Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 24/244 (9%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG     + R     + +K + K  +    ++  +  +   L  + HP I++  G+ 
Sbjct: 14  TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF 73

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
              +++ +I +Y+  G L  +L K  R   P A  YA ++                    
Sbjct: 74  QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPE 133

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQ 300
           N+L D+  H+KI ++    +   +      +       + S    +   D  SFG + Y+
Sbjct: 134 NILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 193

Query: 301 MLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT 360
           ML G     +++    + K +N E +F        +K L+++   +D S+R         
Sbjct: 194 MLAGYTPFYDSNTMKTYEKILNAELRFP-PFFNEDVKDLLSRLITRDLSQRLGNLQ--NG 250

Query: 361 LEEV 364
            E+V
Sbjct: 251 TEDV 254

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 9e-17
 Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 37/247 (14%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELR-----HPNILQ 193
            G FG   +           +K V K  I    ++    +   ++  L+        +++
Sbjct: 14  SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73

Query: 194 FLGSIVLGEEMILITEYL-PKGNLKGILSKKVRLDLPTALRYALDIAR------------ 240
            L      +  +LI E   P  +L   ++++  L    A  +   +              
Sbjct: 74  LLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLH 133

Query: 241 -------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS--SIASNVLDDTKKDI 291
                   L+      LK+ ++      +       +  R  +    I  +        +
Sbjct: 134 RDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 193

Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
            S G + Y M+ G          F H + +     F   R  +  + LI  C    PS R
Sbjct: 194 WSLGILLYDMVCGDIP-------FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 246

Query: 352 PTFAAVI 358
           PTF  + 
Sbjct: 247 PTFEEIQ 253

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 1e-16
 Identities = 35/253 (13%), Positives = 79/253 (31%), Gaps = 33/253 (13%)

Query: 142 QGVFGESQTAKWRGT-------WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQF 194
            G FG      W            +K + ++      K +L       +  + +P++ + 
Sbjct: 19  SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV--MASVDNPHVCRL 76

Query: 195 LGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------- 240
           LG  +     ++         L  +   K  +     L + + IA+              
Sbjct: 77  LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 136

Query: 241 ----NLLQDEGDHLKIGEYWV-QMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDI 291
               N+L     H+KI ++ + ++   +         +     +A   +       + D+
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 196

Query: 292 CSFGYIFYQML-EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
            S+G   ++++  G           +       E   Q   C   +  ++ +C   D   
Sbjct: 197 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256

Query: 351 RPTFAAVIITLEE 363
           RP F  +II   +
Sbjct: 257 RPKFRELIIEFSK 269

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (193), Expect = 2e-16
 Identities = 28/78 (35%), Positives = 43/78 (55%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           +  G    +  +L+ G SPNV +    T LH+AA  GH  + + LLQ KA +N K +  +
Sbjct: 8   SFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 67

Query: 83  TPLTDARLYGHRDICRIL 100
           TPL  A   GH ++ ++L
Sbjct: 68  TPLHCAARIGHTNMVKLL 85

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 3e-14
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 26  GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
           G+   +  +L+     N +     + LH AA +GH  IV LLL+  A+ N       TPL
Sbjct: 308 GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL 367

Query: 86  TDARLYGHRDICRILE 101
             A+  G+  +  +L+
Sbjct: 368 AIAKRLGYISVTDVLK 383

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 1e-11
 Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 16/156 (10%)

Query: 50  TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG---- 105
           T LH+A+  GH PIV+ LLQ  A+ N+ +    TPL  A   GH ++ + L  N      
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 106 KDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKS 165
           K      PL          +         L  +     +   +             V   
Sbjct: 62  KAKDDQTPLHCAARIGHTNMV------KLLLENNANPNLATTAGHTPLHIAAREGHVETV 115

Query: 166 HIYHPVKMVLSAKDNCKLRELR------HPNILQFL 195
                 +   +         L          + + L
Sbjct: 116 LALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELL 151

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 2e-08
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A++  +V + ++L E    PN    +  T LH+A    +  IV+LLL    + +   
Sbjct: 136 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 195

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQP 113
               TPL  A      ++ R L   GG        
Sbjct: 196 WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 2e-08
 Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 4/145 (2%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
             +L +  S         T LH+AA  G   + ELLL+  A+ N   +   TPL  A  +
Sbjct: 116 LALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH 175

Query: 92  GHRDICRILEVNGG----KDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGE 147
            + DI ++L   GG      +    PL +  +++  EV   + +     ++   QGV   
Sbjct: 176 NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPL 235

Query: 148 SQTAKWRGTWVVKTVIKSHIYHPVK 172
              A+     +V  ++       + 
Sbjct: 236 HLAAQEGHAEMVALLLSKQANGNLG 260

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (116), Expect = 6e-07
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 1/114 (0%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A+R     + + L +     N +  D +T LH AA  GH  +V+LLL+  AN NL  
Sbjct: 37  LHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT 96

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISEL 132
               TPL  A   GH +    L           +         +      ++EL
Sbjct: 97  TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 150

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 8e-07
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELL---LQYKANLN 75
           L  A++     +  +L + G SPN    D  T L +A   G+  + ++L       + + 
Sbjct: 334 LHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVL 393

Query: 76  LKDRWQRT 83
           + D+ + +
Sbjct: 394 VSDKHRMS 401

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 1e-06
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 20  LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L   ++   V +  +L + G   +       T LH+A+  G+  +V+ LLQ++A++N K 
Sbjct: 268 LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT 327

Query: 79  RWQRTPLTDARLYGHRDICRILEVNG 104
           +   +PL  A   GH DI  +L  NG
Sbjct: 328 KLGYSPLHQAAQQGHTDIVTLLLKNG 353

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 1e-05
 Identities = 29/73 (39%), Positives = 39/73 (53%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
             +L+ G S N +     T LHLAA EGHA +V LLL  +AN NL ++   TPL      
Sbjct: 215 RSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE 274

Query: 92  GHRDICRILEVNG 104
           GH  +  +L  +G
Sbjct: 275 GHVPVADVLIKHG 287

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 3e-05
 Identities = 22/90 (24%), Positives = 41/90 (45%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
           A  G    +  +L +  + N+ +    T LHL A EGH P+ ++L+++   ++   R   
Sbjct: 239 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY 298

Query: 83  TPLTDARLYGHRDICRILEVNGGKDFIHDQ 112
           TPL  A  YG+  + + L  +        +
Sbjct: 299 TPLHVASHYGNIKLVKFLLQHQADVNAKTK 328

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 1e-04
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           L  A   + + + ++L   G SP+   ++  T LH+AA +    +   LLQY  + N + 
Sbjct: 169 LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES 228

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ----PLTVRNEKDSNEVN 126
               TPL  A   GH ++  +L        + ++    PL +  ++    V 
Sbjct: 229 VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 280

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 2e-15
 Identities = 50/292 (17%), Positives = 101/292 (34%), Gaps = 42/292 (14%)

Query: 112 QPLTVRNEKDSNEVNFDISELNTLHSSMVE---QGVFGE-----SQTAKWRGTWV-VKTV 162
           Q LTV++E  +  +     ++   +  +++    G +G+       +    G    +K +
Sbjct: 1   QLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVL 60

Query: 163 IKSHIYHPVKMVLSAKDNCK-LRELRH-PNILQFLGSIVLGEEMILITEYLPKGNLKGIL 220
            K+ I    K     +   + L  +R  P ++    +     ++ LI +Y+  G L   L
Sbjct: 61  KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 120

Query: 221 SKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE 262
           S++ R        Y  +I                    N+L D   H+ + ++ +   + 
Sbjct: 121 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 180

Query: 263 QIHPNQENSQRNDNSSIASNVL------DDTKKDICSFGYIFYQMLEGKHL----QTNNS 312
                +          +A +++       D   D  S G + Y++L G          NS
Sbjct: 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 240

Query: 313 FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              +  + +  EP +         K LI +   KDP KR          +E+
Sbjct: 241 QAEISRRILKSEPPYP-QEMSALAKDLIQRLLMKDPKKRLGCGPR--DADEI 289

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 5e-15
 Identities = 40/258 (15%), Positives = 74/258 (28%), Gaps = 50/258 (19%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G+ G+      + T   + +K +           +         R  + P+I++ +   
Sbjct: 22  LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELH-------WRASQCPHIVRIVDVY 74

Query: 199 ----VLGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------ 240
                  + ++++ E L  G L   +  +         A      I              
Sbjct: 75  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 134

Query: 241 ------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---IASNVLD----DT 287
                 NLL             +  F         NS      +   +A  VL     D 
Sbjct: 135 RDVKPENLLYTSKRP--NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 192

Query: 288 KKDICSFGYIFYQMLEGKHLQTNNS----FDFMHLKSVNFEPKF---QISRCPNRLKQLI 340
             D+ S G I Y +L G     +N        M  +    + +F   + S     +K LI
Sbjct: 193 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 252

Query: 341 AQCTNKDPSKRPTFAAVI 358
                 +P++R T    +
Sbjct: 253 RNLLKTEPTQRMTITEFM 270

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.9 bits (178), Expect = 1e-14
 Identities = 39/244 (15%), Positives = 86/244 (35%), Gaps = 24/244 (9%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG     K + +   + +K + K  +    ++  +  +   L+ +  P +++   S 
Sbjct: 51  TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------------------R 240
                + ++ EY+  G +   L +  R   P A  YA  I                    
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQ 300
           NLL D+  ++++ ++      +        +       I  +   +   D  + G + Y+
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230

Query: 301 MLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIIT 360
           M  G      +    ++ K V+ + +F  S   + LK L+      D +KR         
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-SHFSSDLKDLLRNLLQVDLTKRFGNLK--NG 287

Query: 361 LEEV 364
           + ++
Sbjct: 288 VNDI 291

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 72.1 bits (175), Expect = 1e-14
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
             +  +G++ + QD D +T + LAA EG   +V  L+Q  A++   D    T    A+  
Sbjct: 205 YLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 264

Query: 92  GHRDICRILE 101
            H +I  I +
Sbjct: 265 NHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 53.2 bits (126), Expect = 2e-08
 Identities = 37/237 (15%), Positives = 75/237 (31%), Gaps = 17/237 (7%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK--------ANL 74
                   + + +   +   +     RT LH  AS   A   E L+ ++        A++
Sbjct: 8   TEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV 67

Query: 75  NLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNT 134
           N  D  + TPL  A L   R +   L   G    I+++       + +   +F +     
Sbjct: 68  NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVY-- 125

Query: 135 LHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQF 194
           + +S   +G   E          +V            K+++              +  ++
Sbjct: 126 MLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY 185

Query: 195 LGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL--PTALRYA-----LDIARNLLQ 244
            G   L     +    + K  +    S K + D    T +  A     +++   L+Q
Sbjct: 186 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 242

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.6 bits (114), Expect = 6e-07
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 20  LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK 71
           +  A++  R+ +   L + G S    D    TA  LA +  H  IV++  + +
Sbjct: 225 IMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 277

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 45.9 bits (107), Expect = 5e-06
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 50  TALHLA-ASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
           + + L   + G   I E + +   N+    R  RT L         +    L V+  K+ 
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 109 I 109
           I
Sbjct: 61  I 61

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-14
 Identities = 47/272 (17%), Positives = 96/272 (35%), Gaps = 49/272 (18%)

Query: 142 QGVFGESQTAKWRGTWVVKT-------VIKSHIYHPVKMVLSAKDNCKLRELRHPNILQF 194
           +G FG+   A   G     T       ++K    H     L ++    +    H N++  
Sbjct: 23  RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 82

Query: 195 LGSIVL-GEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALD 237
           LG+    G  +++I E+   GNL   L  K                  L L   + Y+  
Sbjct: 83  LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 142

Query: 238 IAR------------------NLLQDEGDHLKIGEYWV-QMFYEQIHPNQENSQRNDNSS 278
           +A+                  N+L  E + +KI ++ + +  Y+     ++   R     
Sbjct: 143 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 202

Query: 279 IASNVLD----DTKKDICSFGYIFYQMLEGKHL-QTNNSFDFMHLKSVNFEPKFQI-SRC 332
           +A   +       + D+ SFG + +++             D    + +    + +     
Sbjct: 203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 262

Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
              + Q +  C + +PS+RPTF+ ++  L  +
Sbjct: 263 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.3 bits (171), Expect = 4e-14
 Identities = 25/267 (9%), Positives = 64/267 (23%), Gaps = 51/267 (19%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG+              +K       +  + +          + ++    +  +   
Sbjct: 17  SGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI-----YKMMQGGVGIPTIRWC 71

Query: 199 VL-GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------------------ 239
              G+  +++ E L             +  L T L  A  +                   
Sbjct: 72  GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKP 131

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD-------------- 285
            N L   G        ++  F          + ++       N+                
Sbjct: 132 DNFLMGLGKK--GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIE 189

Query: 286 -DTKKDICSFGYIFYQMLEGKH-------LQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
              + D+ S GY+      G               ++ +  K ++   +      P+   
Sbjct: 190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFA 249

Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
             +  C +     +P ++ +      +
Sbjct: 250 TYLNFCRSLRFDDKPDYSYLRQLFRNL 276

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 8e-14
 Identities = 43/271 (15%), Positives = 78/271 (28%), Gaps = 54/271 (19%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLG 196
           +G F     A+ + T     +K +   H       +          L+EL HPNI+  L 
Sbjct: 8   EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD 67

Query: 197 SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR---------------- 240
           +      + L+ +++       I    + L       Y L   +                
Sbjct: 68  AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLK 127

Query: 241 --NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS----QRNDNSSIASNVLDDTKKDICSF 294
             NLL DE   LK+ ++ +   +   +    +            +    +     D+ + 
Sbjct: 128 PNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 187

Query: 295 GYIFYQMLEGKHLQTNNS--------------------------FDFMHLKSVNFEPKFQ 328
           G I  ++L        +S                           D++  KS    P   
Sbjct: 188 GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH 247

Query: 329 I-SRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
           I S   + L  LI      +P  R T    +
Sbjct: 248 IFSAAGDDLLDLIQGLFLFNPCARITATQAL 278

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (158), Expect = 2e-12
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL-QYKANLNLKDRWQRTPLTDARL 90
           + +L  G   NV+    +T L LA  + H  +V+ LL Q    +N  D   +T L  A  
Sbjct: 203 HLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE 262

Query: 91  YGHRDICRILEVNG 104
              + I  +L   G
Sbjct: 263 LKLKKIAELLCKRG 276

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 4e-10
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 20  LSFASRGDRVGLNQML--REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
           L  A     +GL Q L  +E    N  D D +TAL LA       I ELL +  A+ +  
Sbjct: 223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

Query: 78  D 78
           D
Sbjct: 283 D 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 8e-08
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLNLKD-RWQRTPLTDARLYGHRDICRI 99
          +    L  A       +V+ LL+  AN+N ++     TPL +A      DI  +
Sbjct: 4  EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVEL 57

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 2e-06
 Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 38/114 (33%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELL------------------------ 67
           N   +             TAL  AA +GH  ++++L                        
Sbjct: 132 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191

Query: 68  --------------LQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKD 107
                         L + A++N++    +TPL  A    H  + + L      +
Sbjct: 192 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 3e-05
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ 81
               D   + Q+L  G + N Q+     T LH A       IVELLL++ A+  L+ +  
Sbjct: 13  VQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNG 72

Query: 82  RTPLTDARLYGHRDICRILEVNGGKDFIHDQP 113
            TP   A + G   + ++    G      D  
Sbjct: 73  ATPFLLAAIAGSVKLLKLFLSKGADVNECDFY 104

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 71/280 (25%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G FG    AK   +     +K V++   +   ++ +       +R+L H NI++     
Sbjct: 30  NGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI-------MRKLDHCNIVRLRYFF 82

Query: 199 VLGEE------MILITEYLPKGNLKGILS---KKVRLDLPTALRYALDIARNL------- 242
               E      + L+ +Y+P+   +        K  L +     Y   + R+L       
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142

Query: 243 ------------LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---IASNVLDDT 287
                       L  +   LK+ ++       +  PN          +   I       +
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 202

Query: 288 KKDICSFGYIFYQMLEGKHLQTNNS-----------------------------FDFMHL 318
             D+ S G +  ++L G+ +   +S                             F F  +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 262

Query: 319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
           K+  +   F+  R P     L ++     P+ R T     
Sbjct: 263 KAHPWTKVFR-PRTPPEAIALCSRLLEYTPTARLTPLEAC 301

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 2e-11
 Identities = 37/285 (12%), Positives = 77/285 (27%), Gaps = 71/285 (24%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCK-LRELRHPNILQFLGS 197
           QG FGE   A+ R T     +K V+  +        ++A    K L+ L+H N++  +  
Sbjct: 20  QGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLIEI 77

Query: 198 IVLGEE--------MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------- 240
                         + L+ ++        + +  V+  L    R    +           
Sbjct: 78  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 137

Query: 241 ---------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRN--------DNSSIASNV 283
                    N+L      LK+ ++ +   +     +Q N   N            +    
Sbjct: 138 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER 197

Query: 284 LDDTKKDICSFGYIFYQMLEGKHLQTNNS------------------------------- 312
                 D+   G I  +M     +   N+                               
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257

Query: 313 FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
            + +  +    + + +          LI +    DP++R      
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.6 bits (148), Expect = 4e-11
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
           N QD +  T L++AA  G+  IV+ LL Y A+  + ++    P+
Sbjct: 253 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 296

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.7 bits (125), Expect = 3e-08
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 34/210 (16%)

Query: 41  PNVQ-DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRI 99
            N+  D    T LH   S  +  +V+ L+++ +N    D    + L  A    +      
Sbjct: 99  LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGT 158

Query: 100 LEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVV 159
            E         D        +DS            LH  ++  G+ G S  AK+    ++
Sbjct: 159 FEAL------LDYLYPCLILEDSMNRTI-------LHHIIITSGMTGCSAAAKYYLDILM 205

Query: 160 KTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGI 219
             ++K          + +  N K  +    N  +    +   +   +I   L   +  G 
Sbjct: 206 GWIVKKQ-----NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD 260

Query: 220 LSKKVRLDLPTALRYA-----LDIARNLLQ 244
                     T L  A     + I   LL 
Sbjct: 261 ----------TCLNIAARLGNISIVDALLD 280

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.4 bits (148), Expect = 4e-11
 Identities = 41/269 (15%), Positives = 89/269 (33%), Gaps = 53/269 (19%)

Query: 142 QGVFGESQTAKWRG--TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           +G +G    A+     T+ +K +        +      + +  L+EL+H NI++    I 
Sbjct: 12  EGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISI-LKELKHSNIVKLYDVIH 70

Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL----------------- 242
             + ++L+ E+L +   K +   +  L+  TA  + L +   +                 
Sbjct: 71  TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130

Query: 243 -LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRN----DNSSIASNVLDDTKKDICSFGYI 297
            L +    LKI ++ +   +        +            +  +    T  DI S G I
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190

Query: 298 FYQMLEGKH--------------LQTNNSFDFMHLKSVNFEPKFQ--------------I 329
           F +M+ G                 +   + +  +  +V   PK+               +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250

Query: 330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                    L+++    DP++R T    +
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 60.5 bits (145), Expect = 9e-11
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 24  SRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT 83
           ++G    L  +++     N++DYD  T LH AA  G      +L++   ++   ++  +T
Sbjct: 208 AKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267

Query: 84  PLTDARLYGHRDICRILEVNGGK-DFIH 110
               A      DI   LE    K + +H
Sbjct: 268 AFDVA----DEDILGYLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 54.7 bits (130), Expect = 7e-09
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 45 DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
           +D       A S G    V  LL+  A++N  +    T L  A +  + D+ 
Sbjct: 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMV 89

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.2 bits (113), Expect = 9e-07
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 38  GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
             +         TALH+AA++G+  +++LL+Q + ++N+KD    TPL  A  +G  + C
Sbjct: 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC 248

Query: 98  RILEVNG 104
           RIL  N 
Sbjct: 249 RILVENL 255

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.9 bits (102), Expect = 2e-05
 Identities = 31/139 (22%), Positives = 52/139 (37%)

Query: 19  FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
           FL+  S GD   + ++L  G   N  + D  TALH A  + +  +V+ L++  AN+N  D
Sbjct: 44  FLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD 103

Query: 79  RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSS 138
                PL  A   G+ DI   L   G      +       +    E   ++ +       
Sbjct: 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG 163

Query: 139 MVEQGVFGESQTAKWRGTW 157
           +  +    E +    R   
Sbjct: 164 VDIEAARKEEERIMLRDAR 182

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-10
 Identities = 35/279 (12%), Positives = 71/279 (25%), Gaps = 65/279 (23%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G +G   +A          +K +         +  L       L   RH NI+     I
Sbjct: 18  EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKI--LLRFRHENIIGINDII 75

Query: 199 VLGE----EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------- 240
                   + + +  +L   +L  +L  +  L       +   I R              
Sbjct: 76  RAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRD 134

Query: 241 ----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-------SIASNVLDDTKK 289
               NLL +    LKI ++ +    +  H +         +        + ++       
Sbjct: 135 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 194

Query: 290 DICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ--------------------- 328
           DI S G I  +ML  + +     +       +                            
Sbjct: 195 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPH 254

Query: 329 ---------ISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                         ++   L+ +    +P KR      +
Sbjct: 255 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-10
 Identities = 39/274 (14%), Positives = 76/274 (27%), Gaps = 61/274 (22%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G +G   +A    T     +K  +       +    + ++   L+ +RH N++  L   
Sbjct: 28  SGAYGAVCSAVDGRTGAKVAIK-KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVF 86

Query: 199 VLGE------EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL--LQDEGDH- 249
              E      +  L+  ++  G   G L K  +L           + + L  +   G   
Sbjct: 87  TPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 144

Query: 250 --LKIGEYWVQMFYEQIHPNQENSQRNDNSS--------------IASNVLDDTKKDICS 293
             LK G   V    E    +   +++ D+                I + +      DI S
Sbjct: 145 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS 204

Query: 294 FGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQ------------------------- 328
            G I  +M+ GK L   +       + +                                
Sbjct: 205 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 264

Query: 329 -----ISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
                ++        L+ +    D  +R T    
Sbjct: 265 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (139), Expect = 2e-10
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 6   AASGDFDMQVIGNFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIV 64
           A     D++   + L  A   + + + Q+L + G + N Q Y   +ALH A+  G  P+V
Sbjct: 134 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV 193

Query: 65  ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICR 98
             L++  A+ +LK+    TPL  AR     DI R
Sbjct: 194 RTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 47 DKRTALHLAASEGHAPIVELLLQY----KANLNLKDRWQRTPLTDARLYGHRDIC 97
          D  T LH+A  +G+ P V  L+         L++ +  ++TPL  A +     + 
Sbjct: 2  DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV 56

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 57.9 bits (138), Expect = 3e-10
 Identities = 24/76 (31%), Positives = 33/76 (43%)

Query: 26  GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
            +   +N +L    + + QD    T L LAA EG     + LL   AN  + D   R P 
Sbjct: 134 NNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPR 193

Query: 86  TDARLYGHRDICRILE 101
             A    H DI R+L+
Sbjct: 194 DVASERLHHDIVRLLD 209

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 31 LNQMLREGTSPNV-QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR 89
          ++ +L +G   N   D    T+LHLAA    A   + LL   A+ N +D   RTPL  A 
Sbjct: 5  ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAV 64

Query: 90 LYGHRDICRI 99
                + +I
Sbjct: 65 AADAMGVFQI 74

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.6 bits (88), Expect = 7e-04
 Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 2/131 (1%)

Query: 61  APIVELLLQYKANLNLK-DRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNE 119
           A ++  LL   A LN   D+   T L  A  +   D  + L   G      D        
Sbjct: 2   AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61

Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
                    + ++   + +        +  T       +    +   +      + +A D
Sbjct: 62  AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI-NAAD 120

Query: 180 NCKLRELRHPN 190
           N     L    
Sbjct: 121 NSGKTALHWAA 131

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.7 bits (141), Expect = 3e-10
 Identities = 26/272 (9%), Positives = 64/272 (23%), Gaps = 49/272 (18%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G FG               +K   +      ++           + L     +  +   
Sbjct: 15  EGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT-----YKLLAGCTGIPNVYYF 69

Query: 199 VL-GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
              G   +L+ + L       +     +  + T    A  +                   
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP 129

Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL--------------- 284
            N L    +       +V  F          ++++       N+                
Sbjct: 130 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE 189

Query: 285 DDTKKDICSFGYIFYQMLEGKH-------LQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
              + D+ + G++F   L G               ++ +  K  +   +   +  P    
Sbjct: 190 QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFY 249

Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEVSACLG 369
           + +    N      P +  +     +V   L 
Sbjct: 250 KYMHYARNLAFDATPDYDYLQGLFSKVLERLN 281

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 1e-09
 Identities = 25/101 (24%), Positives = 42/101 (41%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
             +L +G   N  + +  T LH AAS+    I  +LL+  AN + KD ++ T +  A   
Sbjct: 87  KALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK 146

Query: 92  GHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISEL 132
           G+  +  IL        I D           +E   + ++L
Sbjct: 147 GNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKL 187

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 7e-08
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
            N+QD +  T LHLA  E      +LL+   A++ ++++ ++TPL  A+  G   I + +
Sbjct: 162 TNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRM 220

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 1e-05
 Identities = 26/121 (21%), Positives = 36/121 (29%), Gaps = 34/121 (28%)

Query: 18  NFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEG----------------- 59
              + A  G    L + +    +     D D RTALH A S G                 
Sbjct: 6   MVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 65

Query: 60  ----------------HAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVN 103
                              IV+ LL   A +N  ++   TPL  A      +I  +L   
Sbjct: 66  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 104 G 104
           G
Sbjct: 126 G 126

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 3e-04
 Identities = 7/35 (20%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 35  LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ 69
           + +G S  +++ +++T L +A   G   I++ +++
Sbjct: 189 VSQGASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 56.4 bits (135), Expect = 2e-09
 Identities = 10/83 (12%), Positives = 23/83 (27%), Gaps = 3/83 (3%)

Query: 33  QMLREGTSPNVQDYDKRTALHLAASEGHAPIVE---LLLQYKANLNLKDRWQRTPLTDAR 89
              +  +  + +         +AA  G +  ++   LLL     + +           A 
Sbjct: 75  NAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 134

Query: 90  LYGHRDICRILEVNGGKDFIHDQ 112
             GH  +   L      + +   
Sbjct: 135 ENGHLHVLNRLCELAPTEIMAMI 157

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 53.4 bits (127), Expect = 2e-08
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 2/79 (2%)

Query: 31  LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR--WQRTPLTDA 88
           L  +L       V   +   A  LAA  GH  ++  L +      +             A
Sbjct: 109 LCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLA 168

Query: 89  RLYGHRDICRILEVNGGKD 107
              GH  +   L      +
Sbjct: 169 AENGHLHVLNRLCELAPTE 187

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 45.7 bits (107), Expect = 7e-06
 Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 5/66 (7%)

Query: 40  SPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ-----RTPLTDARLYGHR 94
           S  +Q +     L     E     +  LL       L             L  A   G++
Sbjct: 271 SECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ 330

Query: 95  DICRIL 100
             C +L
Sbjct: 331 GACALL 336

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 10/57 (17%), Positives = 15/57 (26%), Gaps = 6/57 (10%)

Query: 20  LSFASRGDRVGLNQML------REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY 70
           L   +    +   + L      +          D    L LA   G+     LLL  
Sbjct: 283 LIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.5 bits (132), Expect = 3e-09
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 44  QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVN 103
           +    RT LHLA     A ++ELLL+  A+   +    RTPL  A L  +  + R+L  +
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247

Query: 104 GGKD 107
           G  +
Sbjct: 248 GAPE 251

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.3 bits (129), Expect = 7e-09
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKAN---LNLKDRWQRTPLTDARLYGHRDIC 97
               D  TALHLA    H P ++ LL + A    L+L++   +T L  A + G     
Sbjct: 3  GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.9 bits (115), Expect = 4e-07
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
           +L+ G  P  + Y  RT L  A    +  +  LL  + A   
Sbjct: 211 LLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 3/105 (2%)

Query: 23  ASRGDRVGLNQMLREGTSP---NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
                   L+ +L         ++Q+   +TALHLAA  G A  VE L    A + + +R
Sbjct: 17  VIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER 76

Query: 80  WQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNE 124
              T L  A          +L               +   +D   
Sbjct: 77  GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 6e-09
 Identities = 46/270 (17%), Positives = 87/270 (32%), Gaps = 53/270 (19%)

Query: 142 QGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
           +G +G    A+ +  G  V    I+           + ++   L+EL HPNI++ L  I 
Sbjct: 12  EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71

Query: 200 LGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIARNL---------------- 242
              ++ L+ E+L +   K + +     + LP    Y   + + L                
Sbjct: 72  TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131

Query: 243 ---LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---IASNVLDDTKKDICSFGY 296
              +  EG          + F   +             +   +       T  DI S G 
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191

Query: 297 IFYQMLEGKH--------------LQTNNSFDFMHLKSVNFEPKFQIS------------ 330
           IF +M+  +                +T  + D +    V   P ++ S            
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251

Query: 331 --RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                   + L++Q  + DP+KR +  A +
Sbjct: 252 VPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 9e-09
 Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 59/272 (21%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
           +G +G    AK R T     +K V        V      ++ C L+EL+H NI++    +
Sbjct: 12  EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHDVL 70

Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------ 240
              +++ L+ E+  +   K   S    LD      +   + +                  
Sbjct: 71  HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130

Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN------SSIASNVLDDTKKDICSF 294
           NLL +    LK+  + +   +    P +  S             +    L  T  D+ S 
Sbjct: 131 NLLINRNGELKLANFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

Query: 295 GYIFYQMLEGKH---------------LQTNNSFDFMHLKSVNFEPKFQ----------- 328
           G IF ++                     +   +       S+   P ++           
Sbjct: 189 GCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSL 248

Query: 329 ---ISRCPNRLKQLIAQCTNKDPSKRPTFAAV 357
              + +     + L+      +P +R +    
Sbjct: 249 VNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 3e-08
 Identities = 36/258 (13%), Positives = 72/258 (27%), Gaps = 77/258 (29%)

Query: 171 VKMVLSAKDNCKLRELR-------HPNILQFLGSIV--LGEEMILITEYLPKGNLKGILS 221
           VK++   K     RE++        PNI+     +   +     L+ E++   + K +  
Sbjct: 65  VKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ 124

Query: 222 KKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYE 262
               L       Y  +I +                    ++  E   L++ ++      E
Sbjct: 125 ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAE 178

Query: 263 QIHPNQENSQRN------DNSSIASNVLDDTKKDICSFGYIFYQMLEGKH---------- 306
             HP QE + R           +    + D   D+ S G +   M+  K           
Sbjct: 179 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 238

Query: 307 --------LQTNNSFDFMHLKSVNFEPKFQ-------------------ISRCPNRLKQL 339
                   L T + +D++   ++  +P+F                               
Sbjct: 239 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 298

Query: 340 IAQCTNKDPSKRPTFAAV 357
           + +    D   R T    
Sbjct: 299 LDKLLRYDHQSRLTAREA 316

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (119), Expect = 2e-07
 Identities = 41/278 (14%), Positives = 76/278 (27%), Gaps = 64/278 (23%)

Query: 142 QGVFGESQTAKWR---GTWVVKTVIKSHIYH---PVKMVLSAKDNCKLRELRHPNILQFL 195
           +G +G+   A+     G +V    ++        P+  +        L    HPN+++  
Sbjct: 17  EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 76

Query: 196 GSIVLGEEMILITEYLPKGNLKG------ILSKKVRLDLPTALRYALDIAR--------- 240
               +          L   ++            +  +   T       + R         
Sbjct: 77  DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 136

Query: 241 ---------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DT 287
                    N+L      +K+ ++ +   Y         S        A  VL      T
Sbjct: 137 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAPEVLLQSSYAT 194

Query: 288 KKDICSFGYIFYQMLEGKHL---------------------------QTNNSFDFMHLKS 320
             D+ S G IF +M   K L                                    H KS
Sbjct: 195 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS 254

Query: 321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
                KF ++      K L+ +C   +P+KR +  + +
Sbjct: 255 AQPIEKF-VTDIDELGKDLLLKCLTFNPAKRISAYSAL 291

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.4 bits (116), Expect = 2e-07
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 50  TALHLAASEGHAPIVELLLQYK-ANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
             LH A  E     V+ LL  K + L  KD+  R PL  +  +   +I   L        
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 109 IHDQP 113
           + D P
Sbjct: 62  LDDYP 66

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 44  QDYDKRTALHLAASEGHAPIVELLL-QYKANLNLKDRWQRTPLTDARLYGHRDICRILEV 102
           QD    T L  A +EGH     LL+ +Y A  +L D         A    +  + +    
Sbjct: 168 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLN 224

Query: 103 NG 104
           N 
Sbjct: 225 NV 226

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 6/40 (15%), Positives = 15/40 (37%), Gaps = 3/40 (7%)

Query: 34  MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           + + G   ++ D     A  +A +E    + +  L    +
Sbjct: 192 VEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFLNNVVD 228

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 3e-07
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 47 DKRTALHLAASEGHAPIVELLLQY----KANLNLKDRWQRTPLTDARLYGHRDIC 97
          D  + LHLA       +   +++      A LN ++  Q+TPL  A +    +I 
Sbjct: 1  DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIA 55

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (105), Expect = 5e-06
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 44  QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVN 103
           +  + RTALHLA    +  +V LLL+  A++N       +P           I + L   
Sbjct: 141 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 200

Query: 104 GGKDFIHDQPLTVRNEKDSNEV 125
             +   + Q L    +++S + 
Sbjct: 201 TLE---NLQMLPESEDEESYDT 219

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 1e-05
 Identities = 8/42 (19%), Positives = 13/42 (30%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN 73
           + +L+ G   N   Y   +   L        I + L Q    
Sbjct: 162 SLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 9e-07
 Identities = 41/268 (15%), Positives = 77/268 (28%), Gaps = 57/268 (21%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G +G    A    T     VK  +       +    + ++   L+ ++H N++  L   
Sbjct: 28  SGAYGSVCAAFDTKTGLRVAVK-KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 86

Query: 199 V----LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------- 240
                L E   +       G     + K  +L           I R              
Sbjct: 87  TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 146

Query: 241 ----NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKK-DICSFG 295
               NL  +E   LKI ++ +    +        ++      I  N +   +  DI S G
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206

Query: 296 YIFYQMLEGKHL--------------------------QTNNSFDFMHLKSVNFEPKFQI 329
            I  ++L G+ L                          + ++     +++S+   PK   
Sbjct: 207 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF 266

Query: 330 SRCPNRL----KQLIAQCTNKDPSKRPT 353
           +            L+ +    D  KR T
Sbjct: 267 ANVFIGANPLAVDLLEKMLVLDSDKRIT 294

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.2 bits (105), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 39/70 (55%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
             +L+ G   N +D  K TALH A    H  +VELL++Y A+++ + ++ +T    +   
Sbjct: 84  EVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143

Query: 92  GHRDICRILE 101
           G+ D+  IL+
Sbjct: 144 GNEDLAEILQ 153

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (82), Expect = 0.002
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 47  DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGK 106
           D    L  AA  G    V +L+   A     D    +PL  A  YGH     +L   G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 107 DFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSH 166
                +         ++E + +I E+   H + V      +     W      + V++  
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 167 IYHPVKMVLSAKDNCKLREL------RHPNILQFL 195
           I +     +  +               + ++ + L
Sbjct: 120 IKYGAD--VHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 6e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
            L  AA+ G    +  LLQ   N+N ++ + R
Sbjct: 3  NELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 1e-04
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 42  NVQDYDKRTALHLAASEGHAPIVELLLQY 70
             +++   TA  LA   G   +V L+   
Sbjct: 127 GHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKAN-LNLKD 78
             +LR   S  + +    T L +A    H    ELL Q  +   N   
Sbjct: 98  KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHV 145

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 24/128 (18%), Positives = 32/128 (25%), Gaps = 42/128 (32%)

Query: 23  ASRGDRVGLNQMLREGTSPNVQ------DYDKRTALHLAA---SEGHAPIVELLLQYKAN 73
               D  GL Q   +G     +           TALHLA          IV+ L+Q   N
Sbjct: 14  VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN 73

Query: 74  L---------------------------------NLKDRWQRTPLTDARLYGHRDICRIL 100
           L                                  + +    TPL  A+   H     +L
Sbjct: 74  LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELL 133

Query: 101 EVNGGKDF 108
                  F
Sbjct: 134 TQALSGRF 141

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 4e-05
 Identities = 33/282 (11%), Positives = 69/282 (24%), Gaps = 74/282 (26%)

Query: 142 QGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
            G  G    A          +K  +     +      + ++   ++ + H NI+  L   
Sbjct: 27  SGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85

Query: 199 V------LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDEGDH--- 249
                    +++ L+ E +     + I  +    D          +   +          
Sbjct: 86  TPQKTLEEFQDVYLVMELMDANLCQVIQMEL---DHERMSYLLYQMLCGIKHLHSAGIIH 142

Query: 250 --LKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL---------------DDTKKDIC 292
             LK     V+        +   ++    S + +  +                    DI 
Sbjct: 143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202

Query: 293 SFGYIFYQMLEGKHLQTNNS-------------------------------FDFMHLKSV 321
           S G I  +M+  K L                                     +      +
Sbjct: 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262

Query: 322 NFEPKFQISRCPNR----------LKQLIAQCTNKDPSKRPT 353
            F   F  S  P             + L+++    DP+KR +
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 6e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQ 69
            + +D    T L LA   G   +V++L  
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 3e-04
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 32  NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLY 91
             ++  G   NV D      +HLA  EGH  +V  L    ++L+ +D    TPL  A   
Sbjct: 85  KVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQR 143

Query: 92  GHRDICRIL 100
           G +D+  IL
Sbjct: 144 GAQDLVDIL 152

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 8e-04
 Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 3/46 (6%)

Query: 32  NQMLREGTSPNVQDY-DKRTALHL--AASEGHAPIVELLLQYKANL 74
             ++  G +     Y D +TA        EG+    + L   +  +
Sbjct: 84  KFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (84), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQ 81
            L  AA+ G    V  LL+  AN N  + + 
Sbjct: 5  DWLATAAARGRVEEVRALLEAGANPNAPNSYG 36

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (82), Expect = 0.002
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 41  PNVQDYDKRTALHLAASEGHAPIVELLLQ 69
            +V+D   R  + LA   GH  +   L  
Sbjct: 95  LDVRDAWGRLPVDLAEELGHRDVARYLRA 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	464
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.82
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.81
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.74
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.74
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.71
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.71
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.69
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.67
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.67
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.67
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.64
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.63
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.63
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.63
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.63
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.61
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.61
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.6
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.59
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.59
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.58
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.58
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.56
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.56
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.56
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.55
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.54
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.53
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.51
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.5
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.44
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.43
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.43
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.38
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.28
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.19
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.76
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.42
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	84.98

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-51  Score=383.67  Aligned_cols=231  Identities=21%  Similarity=0.270  Sum_probs=201.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  ++.||+|++.+...........+.+| ++|++++|||||++++++.+++.+|||||
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE   86 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   86 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence            7999999999999999999985  88999999986543334445678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-CCCcC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-PNQEN  270 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-~~~~g  270 (464)
                      ||++|+|.+++.+.+.+++.+++.++.||+.                  |||++.++.+||+|||+|+...... ....|
T Consensus        87 y~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~G  166 (263)
T d2j4za1          87 YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG  166 (263)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTE
T ss_pred             ecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCC
Confidence            9999999999998889999999999999987                  9999999999999999998776433 34459


Q ss_pred             CCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCC
Q 039021          271 SQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK  350 (464)
Q Consensus       271 t~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  350 (464)
                      |+.|||||++.+..|+.++|||||||++|||++|+.||.+.+............+.++ ..+|+++.+||.+||+.||++
T Consensus       167 t~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dp~~  245 (263)
T d2j4za1         167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQ  245 (263)
T ss_dssp             EGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-ccCCHHHHHHHHHHccCCHhH
Confidence            9999999999999999999999999999999999999988774333333333344444 568999999999999999999


Q ss_pred             CCCHHHHHHHHHHH
Q 039021          351 RPTFAAVIITLEEV  364 (464)
Q Consensus       351 Rpt~~~i~~~l~~~  364 (464)
                      |||++|+++|.+..
T Consensus       246 R~t~~eil~hp~~~  259 (263)
T d2j4za1         246 RPMLREVLEHPWIT  259 (263)
T ss_dssp             SCCHHHHHTCHHHH
T ss_pred             CcCHHHHHcCcCcC
Confidence            99999999987643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-49  Score=374.08  Aligned_cols=240  Identities=20%  Similarity=0.356  Sum_probs=194.1

Q ss_pred             CccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      +|+++.  .+|++++.||+|+||+||+|++++ .||||+++..... ....+.|.+| .+|++++|||||++++++. .+
T Consensus         2 dwei~~--~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~   76 (276)
T d1uwha_           2 DWEIPD--GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYST-AP   76 (276)
T ss_dssp             CCBCCT--TCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCC-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             Cccccc--ccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-cc
Confidence            465554  368889999999999999998765 5999999865433 3456788899 9999999999999999875 45


Q ss_pred             ceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      .++||||||++|+|.+++.. +..+++.+++.++.||++                  |||++.++.+||+|||+|+....
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR  156 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred             EEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence            68999999999999999965 467999999999999997                  99999999999999999987653


Q ss_pred             cC-----CCCcCCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchh-ccccccCC-CCc--cCC
Q 039021          264 IH-----PNQENSQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFM-HLKSVNFE-PKF--QIS  330 (464)
Q Consensus       264 ~~-----~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~-~~~~~~~~-~~~--~~~  330 (464)
                      ..     ....||+.|||||++.+   ..|+.++|||||||++|||+||+.||.+.. .... .....+.. +..  ...
T Consensus       157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  236 (276)
T d1uwha_         157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS  236 (276)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCT
T ss_pred             cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccc
Confidence            22     23459999999999864   458899999999999999999999998865 2222 22222221 211  235


Q ss_pred             CCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHh
Q 039021          331 RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL  368 (464)
Q Consensus       331 ~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~  368 (464)
                      .+|+++.+||.+||+.||++|||+++|+++|+.+.+.+
T Consensus       237 ~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         237 NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999887644

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-50  Score=375.26  Aligned_cols=228  Identities=20%  Similarity=0.184  Sum_probs=190.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++.....  .+..+.+.+| ++|++++|||||++++++.+++.+|||||
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            6999999999999999999985  88999999986532  3344678899 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----HP  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----~~  266 (464)
                      ||+||+|.+++..++.+++.+++.++.||+.                  |||+++++.+||+|||+|+.....     ..
T Consensus        84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~  163 (271)
T d1nvra_          84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  163 (271)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCcccccc
Confidence            9999999999988889999999999999987                  999999999999999999976532     23


Q ss_pred             CCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccc--hhccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ...||+.|||||++.+..+ +.++|||||||++|||++|+.||......  .............+...+|+++.+||.+|
T Consensus       164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  243 (271)
T d1nvra_         164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI  243 (271)
T ss_dssp             CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHH
T ss_pred             ceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHH
Confidence            4469999999999988776 57899999999999999999999876522  11112221122222356899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |+.||++|||++|+++|.|
T Consensus       244 L~~dP~~R~t~~eil~hpw  262 (271)
T d1nvra_         244 LVENPSARITIPDIKKDRW  262 (271)
T ss_dssp             SCSSTTTSCCHHHHTTCTT
T ss_pred             cCCChhHCcCHHHHhcCHh
Confidence            9999999999999998754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-49  Score=369.22  Aligned_cols=229  Identities=20%  Similarity=0.308  Sum_probs=187.9

Q ss_pred             ccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +|++++.||+|+||+||+|++. ++.||||+++.....    .+.+.+| +++++++|||||+++|++.+++.++|||||
T Consensus         6 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~----~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             CEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc----HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            6888999999999999999985 778999999865332    2468889 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC----CC
Q 039021          211 LPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH----PN  267 (464)
Q Consensus       211 ~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~----~~  267 (464)
                      |++|+|.+++... ..+++..++.++.|||+                  |||+++++.+||+|||+|+......    ..
T Consensus        82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~  161 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG  161 (263)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred             cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence            9999999998654 67899999999999987                  9999999999999999998776432    22


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHcc
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTN  345 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  345 (464)
                      ..||+.|||||++.+..|+.++|||||||++|||+| |..||.... .+....+..+.++.. +..+|+++.+||.+||+
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~  240 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-PRLASTHVYQIMNHCWK  240 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC-CTTSCHHHHHHHHHHTC
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHcc
Confidence            348999999999999999999999999999999999 566676655 334444444444443 36689999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHH
Q 039021          346 KDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       346 ~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .||++|||+++|+++|+.+.+
T Consensus       241 ~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         241 ERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHHh
Confidence            999999999999999998865

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-49  Score=370.60  Aligned_cols=227  Identities=18%  Similarity=0.253  Sum_probs=189.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--CCceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--GEEMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--~~~~~lv  207 (464)
                      +|++.+.||+|+||+||+|+++  |+.||+|++...... +...+.+.+| ++|++++|||||++++++.+  .+.+|||
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            6999999999999999999985  889999999876544 3446678899 99999999999999999865  4568999


Q ss_pred             EEecCCCChHHHHhh----ccCCCHHHHHHHHHHHHh-----------------------hhcccCCCceeEecchhhhh
Q 039021          208 TEYLPKGNLKGILSK----KVRLDLPTALRYALDIAR-----------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~-----------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                      ||||++|+|.+++.+    ++.+++..++.++.||+.                       |||++.++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            999999999999864    467999999999999976                       99999999999999999998


Q ss_pred             hcccC---CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCccCCCCcHHH
Q 039021          261 YEQIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       261 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      .....   ....||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+. +....+..+..+.. +..+|+++
T Consensus       164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~s~~l  242 (269)
T d2java1         164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI-PYRYSDEL  242 (269)
T ss_dssp             C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC-CTTSCHHH
T ss_pred             cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CcccCHHH
Confidence            76432   345699999999999999999999999999999999999999988773 33333333333333 36689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      .+||.+||+.||++|||+.|+++|.
T Consensus       243 ~~li~~~L~~dp~~Rps~~ell~hp  267 (269)
T d2java1         243 NEIITRMLNLKDYHRPSVEEILENP  267 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             HHHHHHHcCCChhHCcCHHHHHhCC
Confidence            9999999999999999999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-49  Score=376.59  Aligned_cols=231  Identities=17%  Similarity=0.145  Sum_probs=202.0

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      ..|+.++.||+|+||+||+|++.  |+.||||++...........+.+.+| .+|++++|||||++++++.+++.+||||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35899999999999999999984  88999999987766666667788999 9999999999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN  270 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~g  270 (464)
                      |||.+|+|..++..++++++.+++.++.||+.                  |||+++++.+||+|||+|+..... ....|
T Consensus        95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-~~~~G  173 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSFVG  173 (309)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCCCS
T ss_pred             EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC-Ccccc
Confidence            99999999888877889999999999999987                  999999999999999999876543 35569


Q ss_pred             CCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          271 SQRNDNSSIASN---VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       271 t~~y~aPE~~~~---~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      |+.|||||++.+   ..|+.++|||||||++|||++|+.||.+.. .+....+.....+......+|+++.+||.+||+.
T Consensus       174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~  253 (309)
T d1u5ra_         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK  253 (309)
T ss_dssp             CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCS
T ss_pred             CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcC
Confidence            999999999864   468999999999999999999999998876 3444444444445555567899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEE  363 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~  363 (464)
                      ||++|||+.|+++|.+.
T Consensus       254 dP~~Rpt~~ell~Hp~~  270 (309)
T d1u5ra_         254 IPQDRPTSEVLLKHRFV  270 (309)
T ss_dssp             SGGGSCCHHHHTTCHHH
T ss_pred             ChhHCcCHHHHHhCHHh
Confidence            99999999999998654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-49  Score=377.00  Aligned_cols=235  Identities=15%  Similarity=0.177  Sum_probs=197.7

Q ss_pred             cccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          128 DISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       128 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ++.+.+|++++.||+|+||+||+|+++  |+.||+|+++....  ......+.+| .+|++++|||||+++++|.+++.+
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~   79 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI   79 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC--TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            455678999999999999999999985  88999999986532  3445678899 999999999999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh-------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR-------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||||||+||+|.+++.+++.+++..+..++.|+++                   |||+++++.+||+|||+|+......
T Consensus        80 ~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  159 (322)
T d1s9ja_          80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  159 (322)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT
T ss_pred             EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc
Confidence            999999999999999998889999999999999987                   9999999999999999999876443


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh---cc-----------------------
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM---HL-----------------------  318 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~---~~-----------------------  318 (464)
                       .+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+....   ..                       
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS  239 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------
T ss_pred             cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccc
Confidence             455799999999999999999999999999999999999999976541110   00                       


Q ss_pred             -----------------ccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          319 -----------------KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       319 -----------------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                                       .....++..+...+++++.+||.+||+.||++|||++|+++|.+.-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~  302 (322)
T d1s9ja_         240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  302 (322)
T ss_dssp             ------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             cccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhC
Confidence                             0011112222234688999999999999999999999999996543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-50  Score=377.88  Aligned_cols=229  Identities=14%  Similarity=0.161  Sum_probs=197.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||||++.+.........+.+.+| ++|++++|||||+++++|.+++.+|||||
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            6999999999999999999984  88999999986433333445678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-----CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-----HP  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-----~~  266 (464)
                      ||+||+|.+++...+.+++.+++.++.|++.                  |||+++++.+||+|||+|+.+...     ..
T Consensus        89 y~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~  168 (288)
T d1uu3a_          89 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN  168 (288)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred             ccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccc
Confidence            9999999999998899999999999999987                  999999999999999999876532     22


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      ...||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+.......+....+.++ ..+++++.+||.+||+.
T Consensus       169 ~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~  247 (288)
T d1uu3a_         169 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFFPKARDLVEKLLVL  247 (288)
T ss_dssp             -CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC-TTCCHHHHHHHHTTSCS
T ss_pred             cccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC-ccCCHHHHHHHHHHccC
Confidence            34599999999999999999999999999999999999999998773333333333344444 56899999999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLE  362 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~  362 (464)
                      ||++|||++|++.+.+
T Consensus       248 dP~~R~t~~e~~~~~~  263 (288)
T d1uu3a_         248 DATKRLGCEEMEGYGP  263 (288)
T ss_dssp             SGGGSTTSGGGTCHHH
T ss_pred             CHhHCcCHHHHcCCHH
Confidence            9999999999877654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-49  Score=371.69  Aligned_cols=226  Identities=19%  Similarity=0.242  Sum_probs=194.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++.+.||+|+||+||+|+++  |+.||+|++......   ..+.+.+| ++|++++|||||+++++|.+++.+|||||
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   97 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence            6999999999999999999984  899999999864322   23568889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~  268 (464)
                      ||+||+|.+++.+ +.+++.+++.++.||+.                  |||++.++.+||+|||+|+.+...   ....
T Consensus        98 y~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~  176 (293)
T d1yhwa1          98 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  176 (293)
T ss_dssp             CCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred             ecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence            9999999998865 47999999999999987                  999999999999999999876532   2344


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~  346 (464)
                      .||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+ .+....+.....+.+. +..+|+++.+||.+||+.
T Consensus       177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~  256 (293)
T d1yhwa1         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM  256 (293)
T ss_dssp             CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCS
T ss_pred             ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            59999999999999999999999999999999999999998876 3333333333233222 256899999999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLE  362 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~  362 (464)
                      ||++|||+.|+++|-+
T Consensus       257 dP~~R~s~~eil~Hp~  272 (293)
T d1yhwa1         257 DVEKRGSAKELLQHQF  272 (293)
T ss_dssp             STTTSCCHHHHTTCGG
T ss_pred             ChhHCcCHHHHhcCHh
Confidence            9999999999998854

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-48  Score=370.31  Aligned_cols=232  Identities=19%  Similarity=0.346  Sum_probs=189.6

Q ss_pred             cccccccccccceeeeeEEeEEe--C---ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--G---TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+|++.+.||+|+||+||+|+++  +   ..||||.+....  .....+.|.+| ++|++++|||||+++|++.+++.++
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  103 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVM  103 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            36888899999999999999984  3   258888887542  24556778999 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC
Q 039021          206 LITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP  266 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~  266 (464)
                      +|||||++|+|.+++.. .+.+++.+++.++.||++                  |||++.++.+||+|||+|+.......
T Consensus       104 iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             EEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCC
Confidence            99999999999998876 467999999999999997                  99999999999999999997753221


Q ss_pred             --------CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHH
Q 039021          267 --------NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       267 --------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                              ...||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.. .+....+..+.+++.+ ..+|+++
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~l  262 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP-MDCPSAL  262 (299)
T ss_dssp             ------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC-TTCCHHH
T ss_pred             cceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-ccchHHH
Confidence                    1237899999999999999999999999999999998 899998877 4444444444444443 6689999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .+||.+||+.||++|||+.+|++.|+.+.+
T Consensus       263 ~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         263 HQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            999999999999999999999999988754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-48  Score=364.25  Aligned_cols=227  Identities=15%  Similarity=0.179  Sum_probs=189.7

Q ss_pred             cccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee----CCceEE
Q 039021          134 TLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL----GEEMIL  206 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~----~~~~~l  206 (464)
                      |++.+.||+|+||+||+|+++  ++.||+|.+...... ....+.+.+| ++|++++|||||++++++.+    ...+||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence            466778999999999999985  789999999875443 3446678899 99999999999999999875    346899


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------hhccc-CCCceeEecchhhhhhcccC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------NLLQD-EGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------Nill~-~~~~~kl~DFG~a~~~~~~~  265 (464)
                      |||||++|+|.+++.+.+.+++.+++.++.||++                    |||++ +++.+||+|||+|+......
T Consensus        90 vmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~  169 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  169 (270)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc
Confidence            9999999999999998889999999999999987                    99996 47899999999998765432


Q ss_pred             -CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcHHHHHHHHH
Q 039021          266 -PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPNRLKQLIAQ  342 (464)
Q Consensus       266 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  342 (464)
                       ....||+.|||||++.+ .|+.++|||||||++|||++|+.||....  ......+..+..+......+++++.+||.+
T Consensus       170 ~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~  248 (270)
T d1t4ha_         170 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  248 (270)
T ss_dssp             BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHH
Confidence             34569999999998865 59999999999999999999999998655  222233333333333335678999999999


Q ss_pred             HcccCCCCCCCHHHHHHHHH
Q 039021          343 CTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       343 cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ||+.||++|||+.|+++|.+
T Consensus       249 ~l~~dp~~R~s~~ell~Hp~  268 (270)
T d1t4ha_         249 CIRQNKDERYSIKDLLNHAF  268 (270)
T ss_dssp             HSCSSGGGSCCHHHHHTSGG
T ss_pred             HccCCHhHCcCHHHHhCCcc
Confidence            99999999999999998743

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=367.93  Aligned_cols=236  Identities=17%  Similarity=0.216  Sum_probs=198.4

Q ss_pred             cccccccccc-cccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCc
Q 039021          130 SELNTLHSSM-VEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEE  203 (464)
Q Consensus       130 ~~~~~~~~~~-lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~  203 (464)
                      ...+|.+.+. ||+|+||+||+|.++    +..||||+++...  .....+.+.+| ++|++++|||||+++|++.+ +.
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~   82 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA   82 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-Ce
Confidence            3446667674 999999999999874    4579999998642  34556788999 99999999999999999865 56


Q ss_pred             eEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          204 MILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      +|||||||++|+|.+++.. ++.+++.+++.++.||++                  |||++.++.+||+|||+|+.....
T Consensus        83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence            8999999999999999865 468999999999999987                  999999999999999999876532


Q ss_pred             C------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHH
Q 039021          265 H------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       265 ~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  336 (464)
                      .      ....||+.|||||++.+..++.++|||||||++|||+| |+.||.+.. .+....+..+.++..+ ..+|+++
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~l  241 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP-PECPPEL  241 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC-TTCCHHH
T ss_pred             ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CcCCHHH
Confidence            2      23348999999999999999999999999999999998 999998876 4444444455555554 6799999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      .+||.+||+.||++||||.+|.+.|+.....+.
T Consensus       242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~  274 (285)
T d1u59a_         242 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  274 (285)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999987754443

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.4e-49  Score=370.48  Aligned_cols=237  Identities=19%  Similarity=0.323  Sum_probs=198.5

Q ss_pred             CCCCccccccccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       121 ~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      ....|+++..  +|++.+.||+|+||+||+|+++  ++.||||+++....    ..+.+.+| ++|++++|||||+++++
T Consensus         8 ~~~~wei~~~--~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~il~~l~HpnIv~~~~~   81 (287)
T d1opja_           8 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGV   81 (287)
T ss_dssp             TCCTTBCCGG--GEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS----CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCcccEecHH--HeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc----hHHHHHHHHHHHHhCCCCCEecCCcc
Confidence            3445776654  6888899999999999999995  88999999986532    23468889 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                      |.+++.++||||||++|+|.+++...  ..+++..++.++.||++                  |||+++++.+||+|||+
T Consensus        82 ~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~  161 (287)
T d1opja_          82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL  161 (287)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCC
T ss_pred             EeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccc
Confidence            99999999999999999999999653  67899999999999987                  99999999999999999


Q ss_pred             hhhhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCC-CCCcc-chhccccccCCCCccCCC
Q 039021          258 QMFYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQ-TNNSF-DFMHLKSVNFEPKFQISR  331 (464)
Q Consensus       258 a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~-~~~~~-~~~~~~~~~~~~~~~~~~  331 (464)
                      |+......    ....||+.|||||++.+..|+.++|||||||++|||++|..|| .+.+. +.......+.++..+ ..
T Consensus       162 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~-~~  240 (287)
T d1opja_         162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-EG  240 (287)
T ss_dssp             TTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC-TT
T ss_pred             eeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCC-cc
Confidence            99875432    2233889999999999999999999999999999999966655 44443 333333334444443 66


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|+++.+||.+||+.||++|||+++|++.|+.+
T Consensus       241 ~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            899999999999999999999999999988765

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-49  Score=370.65  Aligned_cols=227  Identities=15%  Similarity=0.170  Sum_probs=193.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|++++.||+|+||+||+|+++  ++.||+|++....   ....+.+.+| ++|++++|||||++++++.+++.++||||
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE   89 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   89 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence            5899999999999999999984  8899999998643   2345678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc---cCCC
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ---IHPN  267 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~---~~~~  267 (464)
                      ||++|+|.+++.+ .+.+++.++..++.||++                  |||++.++.+||+|||+|+....   ...+
T Consensus        90 y~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~  169 (288)
T d2jfla1          90 FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS  169 (288)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTC
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccc
Confidence            9999999999865 467999999999999987                  99999999999999999976543   2345


Q ss_pred             CcCCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCCCCcc-CCCCcHHHHHHH
Q 039021          268 QENSQRNDNSSIAS-----NVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFEPKFQ-ISRCPNRLKQLI  340 (464)
Q Consensus       268 ~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li  340 (464)
                      ..||+.|||||++.     +..|+.++|||||||++|||++|+.||.+.+ .+....+.....+... +..+|+++.+||
T Consensus       170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li  249 (288)
T d2jfla1         170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL  249 (288)
T ss_dssp             CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred             cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHH
Confidence            67999999999984     4668999999999999999999999998876 3333333333333322 356899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||+.||++|||+.|+++|-+
T Consensus       250 ~~~L~~dp~~R~t~~ell~hp~  271 (288)
T d2jfla1         250 KKCLEKNVDARWTTSQLLQHPF  271 (288)
T ss_dssp             HHHSCSSTTTSCCHHHHTTSGG
T ss_pred             HHHccCChhHCcCHHHHhcCcc
Confidence            9999999999999999998743

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-49  Score=363.71  Aligned_cols=226  Identities=17%  Similarity=0.266  Sum_probs=195.6

Q ss_pred             cccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .+|++++.||+|+||+||+|+++ ++.||||+++.....    .+.+.+| .++++++|||||+++|+|.+++.+++|||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~----~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E   79 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   79 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSC----HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCC----HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence            37889999999999999999996 668999999875433    3468889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCC----
Q 039021          210 YLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHP----  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~----  266 (464)
                      |+++|+|.+++.. ...+++..+++++.|+++                  |||+++++.+||+|||+|+.......    
T Consensus        80 y~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             CCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             ccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence            9999999999754 568999999999999987                  99999999999999999987654322    


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHc
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCT  344 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  344 (464)
                      ...||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+ .+....+..+.++. .+..+|+++.+||.+||
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~-~p~~~~~~l~~li~~cl  238 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY-RPHLASEKVYTIMYSCW  238 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHTT
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC-CcccccHHHHHHHHHHc
Confidence            2348999999999999999999999999999999998 899999887 33443344444444 34678999999999999


Q ss_pred             ccCCCCCCCHHHHHHHHH
Q 039021          345 NKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       345 ~~dp~~Rpt~~~i~~~l~  362 (464)
                      +.||++|||+++|+++|.
T Consensus       239 ~~dP~~RPt~~eil~~L~  256 (258)
T d1k2pa_         239 HEKADERPTFKILLSNIL  256 (258)
T ss_dssp             CSSGGGSCCHHHHHHHHH
T ss_pred             cCCHhHCcCHHHHHHHhh
Confidence            999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-49  Score=364.62  Aligned_cols=233  Identities=21%  Similarity=0.359  Sum_probs=192.5

Q ss_pred             ccccccccccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-CC
Q 039021          125 VNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-GE  202 (464)
Q Consensus       125 ~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~  202 (464)
                      |+++..  +|++++.||+|+||.||+|+++|+.||||+++.+.     ..+.+.+| ++|++++|||||+++|++.+ .+
T Consensus         2 w~i~~~--~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~   74 (262)
T d1byga_           2 WALNMK--ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   74 (262)
T ss_dssp             CBCCGG--GEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred             CccCHH--HeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHH-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC
Confidence            566655  57788999999999999999999999999997642     33568889 99999999999999999865 46


Q ss_pred             ceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          203 EMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      .++|||||+++|+|.+++..+  ..+++..++.++.||+.                  |||++.++.+||+|||+++...
T Consensus        75 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~  154 (262)
T d1byga_          75 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  154 (262)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             cEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecC
Confidence            689999999999999999654  46999999999999987                  9999999999999999999887


Q ss_pred             ccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHH
Q 039021          263 QIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       263 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                      .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... .+....+..+.++.++ ..+++++.+||
T Consensus       155 ~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li  233 (262)
T d1byga_         155 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP-DGCPPAVYEVM  233 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCC-TTCCHHHHHHH
T ss_pred             CCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCCHHHHHHH
Confidence            76667779999999999999999999999999999999998 788888776 4444444455566655 56899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      .+||+.||++|||+.+|+++|+.+.
T Consensus       234 ~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         234 KNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHcccCHhHCcCHHHHHHHHHHHH
Confidence            9999999999999999999998874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-48  Score=370.38  Aligned_cols=228  Identities=18%  Similarity=0.150  Sum_probs=178.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      .|++.+.||+|+||+||+|+++  |+.||+|++......  .....+.+| .+|++++|||||++++++.+++.+|||||
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5999999999999999999985  889999999865432  234567889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhccc---CCCceeEecchhhhhhccc--CC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQD---EGDHLKIGEYWVQMFYEQI--HP  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~---~~~~~kl~DFG~a~~~~~~--~~  266 (464)
                      ||+||+|.+++..++.+++.++..++.||+.                  |||+.   +++.+||+|||+|+.....  ..
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~  167 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS  167 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence            9999999999998889999999999999987                  99984   5788999999999877543  23


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccC-CCCc-cCCCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNF-EPKF-QISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~c  343 (464)
                      +..||+.|||||++.+..|+.++|||||||++|||++|+.||.+... +....+.... .... ....+|+++.+||.+|
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  247 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL  247 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHH
Confidence            45699999999999999999999999999999999999999988763 2222222211 1111 1256899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |++||++|||+.|+++|.+
T Consensus       248 L~~dP~~R~s~~eil~hp~  266 (307)
T d1a06a_         248 MEKDPEKRFTCEQALQHPW  266 (307)
T ss_dssp             SCSSGGGSCCHHHHHHSTT
T ss_pred             ccCCHhHCcCHHHHhcCHh
Confidence            9999999999999998854

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-48  Score=365.44  Aligned_cols=224  Identities=17%  Similarity=0.239  Sum_probs=188.7

Q ss_pred             cccccceeeeeEEeEEe----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEecC
Q 039021          138 SMVEQGVFGESQTAKWR----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYLP  212 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  212 (464)
                      +.||+|+||+||+|.++    ++.||||+++.... .....+.+.+| ++|++++|||||+++|+|.+ +..+||||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCC
Confidence            57999999999999874    46899999976432 33455678999 99999999999999999864 56789999999


Q ss_pred             CCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC------CCC
Q 039021          213 KGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH------PNQ  268 (464)
Q Consensus       213 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~------~~~  268 (464)
                      +|+|.++++....+++.+++.++.||++                  |||++.++.+||+|||+|+......      ...
T Consensus        91 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~  170 (277)
T d1xbba_          91 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  170 (277)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred             CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccccc
Confidence            9999999998889999999999999987                  9999999999999999998764321      223


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHHHHHHHccc
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNK  346 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  346 (464)
                      .||+.|||||++.+..++.++|||||||++|||++ |+.||.+.. .+....+..+.++..+ ..+|+++.+||.+||+.
T Consensus       171 ~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~~~~li~~cl~~  249 (277)
T d1xbba_         171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP-AGCPREMYDLMNLCWTY  249 (277)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCS
T ss_pred             CCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCC-cccCHHHHHHHHHHcCC
Confidence            48999999999999999999999999999999998 899999877 3444444444555544 67899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHH
Q 039021          347 DPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       347 dp~~Rpt~~~i~~~l~~~  364 (464)
                      ||++|||+++|.+.|+..
T Consensus       250 dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         250 DVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             STTTSCCHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhhCH
Confidence            999999999998877654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.8e-48  Score=371.13  Aligned_cols=229  Identities=23%  Similarity=0.308  Sum_probs=201.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++++.........+.+.+| .+|++++|||||++++++.+++.+|+|||
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   84 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   84 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEee
Confidence            6999999999999999999985  89999999986543334445678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      ||+||+|..++.....+++..+..++.||+.                  |||++.+|.+||+|||+|+.........+||
T Consensus        85 ~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt  164 (316)
T d1fota_          85 YIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGT  164 (316)
T ss_dssp             CCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSC
T ss_pred             ecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCc
Confidence            9999999999999999999999999999987                  9999999999999999999988777778899


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      +.|||||++.+..|+.++|||||||++|||++|+.||.+.+..............++ ..+|+++.+++.+||++||.+|
T Consensus       165 ~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dp~~R  243 (316)
T d1fota_         165 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP-PFFNEDVKDLLSRLITRDLSQR  243 (316)
T ss_dssp             TTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSCTTTC
T ss_pred             ccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhhCHHhc
Confidence            999999999999999999999999999999999999998773333222222233443 5689999999999999999999


Q ss_pred             C-----CHHHHHHHHH
Q 039021          352 P-----TFAAVIITLE  362 (464)
Q Consensus       352 p-----t~~~i~~~l~  362 (464)
                      |     |++++++|.+
T Consensus       244 ~~~~r~t~~~il~Hp~  259 (316)
T d1fota_         244 LGNLQNGTEDVKNHPW  259 (316)
T ss_dssp             TTSSTTTTHHHHTSGG
T ss_pred             cccchhhHHHHHcCcc
Confidence            6     8999999854

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-48  Score=361.67  Aligned_cols=235  Identities=20%  Similarity=0.274  Sum_probs=195.2

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL  200 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~  200 (464)
                      .+|+++.  .+|++.+.||+|+||+||+|+++ ++.||||+++.....    .+.+.+| ++|++++|||||+++|++.+
T Consensus         6 ~~wei~~--~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~----~~~~~~E~~~l~~l~HpnIv~~~g~~~~   79 (272)
T d1qpca_           6 DEWEVPR--ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVTQ   79 (272)
T ss_dssp             CTTBCCG--GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCeecCH--HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCC----HHHHHHHHHHHHhCCCCCEeEEEeeecc
Confidence            4566654  47889999999999999999996 678999999864322    3468899 99999999999999998754


Q ss_pred             CCceEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhh
Q 039021          201 GEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMF  260 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~  260 (464)
                       +.++||||||++|+|.+++...  .++++.+++.++.||++                  |||+++++.+||+|||+|+.
T Consensus        80 -~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (272)
T ss_dssp             -SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEE
Confidence             5679999999999999988653  46999999999999987                  99999999999999999987


Q ss_pred             hccc----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCC-CCCCCCc-cchhccccccCCCCccCCCCcH
Q 039021          261 YEQI----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK-HLQTNNS-FDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       261 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~-~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ....    .....||+.|||||++.+..++.++|||||||++|||+||. +||.... .+....+..+.++..+ ..+|+
T Consensus       159 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p-~~~~~  237 (272)
T d1qpca_         159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP-DNCPE  237 (272)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCH
T ss_pred             ccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCc-ccChH
Confidence            7532    23345899999999999999999999999999999999955 4555544 3334444444444433 67999


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHHH
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVS  365 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~  365 (464)
                      ++.+||.+||+.||++|||+++|++.|+.+-
T Consensus       238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            9999999999999999999999999998763

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-48  Score=371.17  Aligned_cols=229  Identities=17%  Similarity=0.194  Sum_probs=200.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++++...........+.+| .+|++++|||||+++++|.+.+.+|+|||
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~e   85 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccccee
Confidence            6999999999999999999984  89999999987543334445678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~~  268 (464)
                      ||+||+|.+++.+.+.+++..++.++.||+.                  |||++++|.+||+|||+|+.....   ....
T Consensus        86 y~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~  165 (337)
T d1o6la_          86 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF  165 (337)
T ss_dssp             CCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCC
T ss_pred             ccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccc
Confidence            9999999999999899999999999999987                  999999999999999999876432   2345


Q ss_pred             cCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCC
Q 039021          269 ENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP  348 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  348 (464)
                      +||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+...+........+.++ ..+|+++.+||.+||++||
T Consensus       166 ~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~dli~~~L~~dP  244 (337)
T d1o6la_         166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKDP  244 (337)
T ss_dssp             EECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHTCSST
T ss_pred             eeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC-ccCCHHHHHHHHhhccCCc
Confidence            699999999999999999999999999999999999999999884444334433445554 5689999999999999999


Q ss_pred             CCCCC-----HHHHHHHHH
Q 039021          349 SKRPT-----FAAVIITLE  362 (464)
Q Consensus       349 ~~Rpt-----~~~i~~~l~  362 (464)
                      .+||+     +.++++|.+
T Consensus       245 ~~R~~~~~~~~~eil~Hp~  263 (337)
T d1o6la_         245 KQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             TTSTTCSTTTHHHHHTSGG
T ss_pred             hhhcccccccHHHHHcCcc
Confidence            99994     899998854

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-48  Score=369.69  Aligned_cols=234  Identities=21%  Similarity=0.249  Sum_probs=192.4

Q ss_pred             ccccccccccccccccccceeeeeEEeEEeC-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeee
Q 039021          125 VNFDISELNTLHSSMVEQGVFGESQTAKWRG-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFL  195 (464)
Q Consensus       125 ~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~  195 (464)
                      |+++.  .+|++++.||+|+||+||+|++++       ..||+|.+....  .......+.+| .+|+++ +|||||+++
T Consensus        32 wei~~--~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~  107 (325)
T d1rjba_          32 WEFPR--ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLL  107 (325)
T ss_dssp             GBCCG--GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccCCH--HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEE
Confidence            44443  478899999999999999999852       269999987542  23445677888 999988 899999999


Q ss_pred             ceeeeCCceEEEEEecCCCChHHHHhhc-----------------------cCCCHHHHHHHHHHHHh------------
Q 039021          196 GSIVLGEEMILITEYLPKGNLKGILSKK-----------------------VRLDLPTALRYALDIAR------------  240 (464)
Q Consensus       196 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~-----------------------~~l~~~~~~~~~~qi~~------------  240 (464)
                      +++.+.+.+|||||||++|+|.++|+.+                       ..+++.+++.|+.||++            
T Consensus       108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiH  187 (325)
T d1rjba_         108 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  187 (325)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            9999999999999999999999999754                       24899999999999987            


Q ss_pred             ------hhcccCCCceeEecchhhhhhcccCC-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCC
Q 039021          241 ------NLLQDEGDHLKIGEYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQ  308 (464)
Q Consensus       241 ------Nill~~~~~~kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~  308 (464)
                            |||++.++.+||+|||+|+.......     +..||+.|||||++.+..|+.++|||||||++|||++ |+.||
T Consensus       188 RDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf  267 (325)
T d1rjba_         188 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  267 (325)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             ccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCC
Confidence                  99999999999999999987764432     3347999999999999999999999999999999998 89999


Q ss_pred             CCCc-cchhc-cccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          309 TNNS-FDFMH-LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       309 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      .+.. .+... ....+.++..+ ..+|+++.+||.+||+.||++|||++||+++|..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~p-~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         268 PGIPVDANFYKLIQNGFKMDQP-FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             TTCCCSHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCCCCCC-CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            8866 22222 22333344433 6689999999999999999999999999999853

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=358.62  Aligned_cols=238  Identities=19%  Similarity=0.317  Sum_probs=190.9

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      +|+++..  +|++++.||+|+||+||+|++.     +..||+|.++..  ......+.+.+| .+|++++|||||+++++
T Consensus         1 ~~ei~~~--~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~   76 (273)
T d1mp8a_           1 DYEIQRE--RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGV   76 (273)
T ss_dssp             CCBCCGG--GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CCCcCHH--HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            3566544  7999999999999999999984     346888888653  234556778899 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhh
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQ  258 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a  258 (464)
                      +. .+.+++||||+++|+|.+++.. .+.+++..++.++.||++                  ||++++++.+||+|||+|
T Consensus        77 ~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a  155 (273)
T d1mp8a_          77 IT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS  155 (273)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----
T ss_pred             Ee-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhh
Confidence            86 4678999999999999998765 467999999999999987                  999999999999999999


Q ss_pred             hhhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCC
Q 039021          259 MFYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRC  332 (464)
Q Consensus       259 ~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~  332 (464)
                      +......    ....||+.|+|||++.+..|+.++|||||||++|||++ |..||.+.+ .+....+..+.+++.+ ..+
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~-~~~  234 (273)
T d1mp8a_         156 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-PNC  234 (273)
T ss_dssp             ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-TTC
T ss_pred             eeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCC
Confidence            8865332    23348999999999999999999999999999999998 899998877 4444444444444444 679


Q ss_pred             cHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                      |+++.+||.+||+.||++|||+.+|+++|+.+.+.
T Consensus       235 ~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         235 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-47  Score=362.90  Aligned_cols=230  Identities=19%  Similarity=0.188  Sum_probs=195.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      .+|++++.||+|+||+||+|+++  |+.||+|++++......   ...+.+.+| .+|++++|||||+++++|.+++.+|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            46999999999999999999985  88999999986543221   234678889 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC----ceeEecchhhhhhcc
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD----HLKIGEYWVQMFYEQ  263 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~----~~kl~DFG~a~~~~~  263 (464)
                      ||||||+||+|.+++..++.+++..++.++.|++.                  |||++.++    .+||+|||+|+....
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~  169 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  169 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence            99999999999999998889999999999999987                  99998876    499999999988753


Q ss_pred             c--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccccccCCCCcc---CCCCcHHHH
Q 039021          264 I--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVNFEPKFQ---ISRCPNRLK  337 (464)
Q Consensus       264 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~  337 (464)
                      .  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+. +....+... ...++   ...+|+++.
T Consensus       170 ~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~  248 (293)
T d1jksa_         170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV-NYEFEDEYFSNTSALAK  248 (293)
T ss_dssp             SCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT-CCCCCHHHHTTSCHHHH
T ss_pred             CccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhc-CCCCCchhcCCCCHHHH
Confidence            3  3345699999999999999999999999999999999999999998773 332222221 22221   256899999


Q ss_pred             HHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       338 ~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      +||++||+.||++|||++|+++|-+
T Consensus       249 ~li~~~L~~dP~~R~s~~eil~hp~  273 (293)
T d1jksa_         249 DFIRRLLVKDPKKRMTIQDSLQHPW  273 (293)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHHccCChhHCcCHHHHhcCcc
Confidence            9999999999999999999998753

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-47  Score=356.53  Aligned_cols=231  Identities=20%  Similarity=0.292  Sum_probs=189.4

Q ss_pred             ccccccccccceeeeeEEeEEeC------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~  205 (464)
                      +|+..+.||+|+||+||+|.+++      ..||||++.....  ......+.+| ++|++++|||||+++|++.+.+..+
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC--hHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            57888999999999999999852      4799999976432  3445678889 9999999999999999999999999


Q ss_pred             EEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC-
Q 039021          206 LITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      +|||||.+|+|.+++... +.+++.+++.++.||++                  |||++.++.+||+|||+|+...... 
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            999999999999988654 68999999999999987                  9999999999999999998765322 


Q ss_pred             -----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC-CCCCc-cchhccccccCCCCccCCCCcHHHHH
Q 039021          266 -----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHL-QTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 -----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                           ....||+.|||||++.+..++.++|||||||++|||++|..| |.... .+....+..+.+++.+ ..+|+++.+
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~  244 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP-MDCPSAIYQ  244 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC-TTCBHHHHH
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCc-hhhHHHHHH
Confidence                 123489999999999999999999999999999999996555 44444 3344444444455544 668999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ||.+||+.||++|||+.+|++.|+.+.+
T Consensus       245 li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         245 LMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999988764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3e-47  Score=368.71  Aligned_cols=227  Identities=15%  Similarity=0.203  Sum_probs=193.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++....   ....+.+.+| .+|++++|||||++++++.+++.+|||||
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            7999999999999999999985  8999999997642   3345678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhcccC--CCceeEecchhhhhhcccCC--
Q 039021          210 YLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQDE--GDHLKIGEYWVQMFYEQIHP--  266 (464)
Q Consensus       210 ~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~~--~~~~kl~DFG~a~~~~~~~~--  266 (464)
                      ||+||+|.+++. ..+.+++.+++.++.||+.                  |||++.  ++.+||+|||+|+.......  
T Consensus       104 ~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  183 (350)
T d1koaa2         104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  183 (350)
T ss_dssp             CCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred             cCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence            999999999995 4568999999999999987                  999964  57899999999988764332  


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccccc-CC-CCccCCCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKSVN-FE-PKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~~~-~~-~~~~~~~~~~~~~~li~~c  343 (464)
                      ...||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+. +....+... .. +......+|+++.+||.+|
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  263 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKL  263 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHH
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHH
Confidence            34599999999999999999999999999999999999999988763 333222211 11 1112256899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |+.||++|||++|+++|-+
T Consensus       264 L~~dP~~R~t~~eil~hp~  282 (350)
T d1koaa2         264 LLADPNTRMTIHQALEHPW  282 (350)
T ss_dssp             CCSSGGGSCCHHHHHHSTT
T ss_pred             ccCChhHCcCHHHHhcCcc
Confidence            9999999999999999854

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.7e-47  Score=369.25  Aligned_cols=229  Identities=17%  Similarity=0.165  Sum_probs=200.9

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++.+.........+.+.+| ++|+.++|||||++++++.+...+++|||
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccc
Confidence            7999999999999999999985  89999999986433333445667889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccCCCCcCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENS  271 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~~~~~gt  271 (464)
                      |+.+|+|.+++.+.+.+++.+++.++.||+.                  |||++.+|.+||+|||+|+..........||
T Consensus       122 ~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt  201 (350)
T d1rdqe_         122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT  201 (350)
T ss_dssp             CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEEC
T ss_pred             cccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCc
Confidence            9999999999998889999999999999987                  9999999999999999999887766677799


Q ss_pred             CCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCC
Q 039021          272 QRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR  351 (464)
Q Consensus       272 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  351 (464)
                      +.|||||++.+..|+.++|||||||++|||++|+.||.+.+.......+....+.++ ..+|+++.+||++||+.||.+|
T Consensus       202 ~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP~kR  280 (350)
T d1rdqe_         202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP-SHFSSDLKDLLRNLLQVDLTKR  280 (350)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTCCHHHHHHHHHHSCSCTTTC
T ss_pred             cccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC-ccCCHHHHHHHHHHhhhCHHhc
Confidence            999999999999999999999999999999999999988773333332322333333 5689999999999999999999


Q ss_pred             C-----CHHHHHHHHH
Q 039021          352 P-----TFAAVIITLE  362 (464)
Q Consensus       352 p-----t~~~i~~~l~  362 (464)
                      +     |++++++|-+
T Consensus       281 ~~~~r~t~~ell~Hp~  296 (350)
T d1rdqe_         281 FGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             TTSSTTTTHHHHTSGG
T ss_pred             cccccccHHHHHcCcc
Confidence            4     8999998854

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=354.18  Aligned_cols=237  Identities=22%  Similarity=0.328  Sum_probs=192.7

Q ss_pred             CCCCCccccccccccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       120 ~~~~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      ..+..|+++..  +|++++.||+|+||+||+|+++ ++.||||+++.....    .+.|.+| .+|++++|||||+++|+
T Consensus         7 ~~~~~~~i~~~--~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~----~~~~~~E~~~l~~l~h~nIv~~~g~   80 (285)
T d1fmka3           7 LAKDAWEIPRE--SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAV   80 (285)
T ss_dssp             SSTTCSBCCGG--GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCCcceEcCHH--HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCC----HHHHHHHHHHHHhcccCCEeEEEEE
Confidence            34566777654  7999999999999999999996 568999999865332    3468889 99999999999999999


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhh--ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSK--KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                      +.+ +..++|||||++|+|.+++..  .+.+++.+++.++.||+.                  |||+++++.+||+|||+
T Consensus        81 ~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGl  159 (285)
T d1fmka3          81 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL  159 (285)
T ss_dssp             ECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred             Eec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccch
Confidence            854 568999999999999999865  357999999999999987                  99999999999999999


Q ss_pred             hhhhcccC----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCC-CCCc-cchhccccccCCCCccCCC
Q 039021          258 QMFYEQIH----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQ-TNNS-FDFMHLKSVNFEPKFQISR  331 (464)
Q Consensus       258 a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~-~~~~-~~~~~~~~~~~~~~~~~~~  331 (464)
                      |+......    ....||+.|+|||++....++.++|||||||++|||++|..|| .... .+....+..+.+++.+ ..
T Consensus       160 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~-~~  238 (285)
T d1fmka3         160 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP-PE  238 (285)
T ss_dssp             TC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TT
T ss_pred             hhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC-cc
Confidence            98765332    2244899999999999999999999999999999999965555 4444 3344444444444544 67


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +|+++.+||.+||+.||++|||+++|+..|+.+
T Consensus       239 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             cCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence            899999999999999999999999999887764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=7.8e-47  Score=366.06  Aligned_cols=227  Identities=16%  Similarity=0.199  Sum_probs=193.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|+++...   ......+.+| .+|++++|||||+++++|.+++.+|||||
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE  106 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  106 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            5999999999999999999984  8999999998643   2334577889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhccc--CCCceeEecchhhhhhcccC--C
Q 039021          210 YLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQD--EGDHLKIGEYWVQMFYEQIH--P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~--~~~~~kl~DFG~a~~~~~~~--~  266 (464)
                      ||+||+|.+++... .++++.+++.++.||+.                  |||++  .++.+||+|||+|+......  .
T Consensus       107 ~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~  186 (352)
T d1koba_         107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK  186 (352)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCcee
Confidence            99999999988654 47999999999999987                  99998  56899999999999876433  2


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccC-C-CCccCCCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNF-E-PKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~c  343 (464)
                      ...||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ .+....+.... . +......+|+++.+||.+|
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  266 (352)
T d1koba_         187 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNL  266 (352)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTT
T ss_pred             eccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHH
Confidence            3459999999999999999999999999999999999999999877 33333222211 1 1112256899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~  362 (464)
                      |+.||++|||+.|+++|-+
T Consensus       267 L~~dp~~R~s~~eil~Hp~  285 (352)
T d1koba_         267 LQKEPRKRLTVHDALEHPW  285 (352)
T ss_dssp             SCSSGGGSCCHHHHHTSTT
T ss_pred             ccCChhHCcCHHHHhcCHh
Confidence            9999999999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-46  Score=356.07  Aligned_cols=231  Identities=21%  Similarity=0.287  Sum_probs=197.2

Q ss_pred             ccccccccccccceeeeeEEeEEeC-------ceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWRG-------TWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~  202 (464)
                      ..+|++++.||+|+||+||+|++++       +.||||+++...  ..+....+.+| ++|++++||||+++++++.+.+
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~   89 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK   89 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence            4479999999999999999999853       689999998643  24456778999 9999999999999999999999


Q ss_pred             ceEEEEEecCCCChHHHHhhc------------------------cCCCHHHHHHHHHHHHh------------------
Q 039021          203 EMILITEYLPKGNLKGILSKK------------------------VRLDLPTALRYALDIAR------------------  240 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~------------------------~~l~~~~~~~~~~qi~~------------------  240 (464)
                      ..++||||+++|+|.+++...                        ..+++..++.++.|+++                  
T Consensus        90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~  169 (301)
T d1lufa_          90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR  169 (301)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEccc
Confidence            999999999999999999643                        24889999999999987                  


Q ss_pred             hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCC-CCCCCCc-c
Q 039021          241 NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK-HLQTNNS-F  313 (464)
Q Consensus       241 Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~-~p~~~~~-~  313 (464)
                      |||++.++.+||+|||+|+......     ....||+.|+|||++.+..|+.++|||||||++|||++|. .||.+.. .
T Consensus       170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~  249 (301)
T d1lufa_         170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE  249 (301)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHH
Confidence            9999999999999999998765322     2345889999999999999999999999999999999985 6788776 4


Q ss_pred             chhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          314 DFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      +....+..+..+..+ ..+|+++.+||.+||+.||++||||.||++.|+++
T Consensus       250 e~~~~v~~~~~~~~p-~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         250 EVIYYVRDGNILACP-ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             HHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            444444444444443 67899999999999999999999999999999876

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-47  Score=364.33  Aligned_cols=229  Identities=19%  Similarity=0.222  Sum_probs=193.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHH-HhcCCCceeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKL-RELRHPNILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l-~~l~hpnIv~~~~~~~~~~~~~lv~  208 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++++.........+.+..| .++ +.++|||||++++++.+++.+||||
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivm   82 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM   82 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEE
Confidence            6899999999999999999994  89999999986432222333444555 554 5789999999999999999999999


Q ss_pred             EecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---CCC
Q 039021          209 EYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---HPN  267 (464)
Q Consensus       209 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---~~~  267 (464)
                      |||++|+|.++++..+.+++.+++.++.||+.                  |||+++++.+||+|||+|+.....   ...
T Consensus        83 Ey~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~  162 (320)
T d1xjda_          83 EYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT  162 (320)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred             eecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccc
Confidence            99999999999999889999999999999987                  999999999999999999876532   233


Q ss_pred             CcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHHHHHcccC
Q 039021          268 QENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKD  347 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  347 (464)
                      ..||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+............+.++ ..+|+++.+||.+||+.|
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p-~~~s~~~~dli~~~L~~d  241 (320)
T d1xjda_         163 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-RWLEKEAKDLLVKLFVRE  241 (320)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-TTSCHHHHHHHHHHSCSS
T ss_pred             cCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-ccCCHHHHHHHHHhcccC
Confidence            4599999999999999999999999999999999999999998774333333333344444 568999999999999999


Q ss_pred             CCCCCCHH-HHHHHHH
Q 039021          348 PSKRPTFA-AVIITLE  362 (464)
Q Consensus       348 p~~Rpt~~-~i~~~l~  362 (464)
                      |++|||+. ++++|.+
T Consensus       242 P~~R~s~~~~l~~hpf  257 (320)
T d1xjda_         242 PEKRLGVRGDIRQHPL  257 (320)
T ss_dssp             GGGSBTTBSCGGGSGG
T ss_pred             CCCCcCHHHHHHhCch
Confidence            99999995 7887743

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.9e-46  Score=350.43  Aligned_cols=231  Identities=16%  Similarity=0.158  Sum_probs=194.1

Q ss_pred             cccccccccccceeeeeEEeEE--eCceEEEEEeeccCCch------HHHHHhHHHH-HHHHhcC-CCceeeeeceeeeC
Q 039021          132 LNTLHSSMVEQGVFGESQTAKW--RGTWVVKTVIKSHIYHP------VKMVLSAKDN-CKLRELR-HPNILQFLGSIVLG  201 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~------~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~  201 (464)
                      .+|++.+.||+|+||+||+|++  .|+.||+|++.......      ....+.+.+| .+|++++ |||||++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            4789999999999999999998  48999999998654321      2344567889 9999997 99999999999999


Q ss_pred             CceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          202 EEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       202 ~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      +.+|||||||++|+|.++|+.++++++.+++.++.||+.                  |||++.++.+||+|||+++....
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  162 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence            999999999999999999998899999999999999987                  99999999999999999988764


Q ss_pred             c--CCCCcCCCCccccccccc------CCCCCcccchhHHHHHHHHHhCCCCCCCCccchh-cccccc-CCCCc-cCCCC
Q 039021          264 I--HPNQENSQRNDNSSIASN------VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM-HLKSVN-FEPKF-QISRC  332 (464)
Q Consensus       264 ~--~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~-~~~~~~-~~~~~-~~~~~  332 (464)
                      .  .....||+.|+|||++.+      ..++.++||||+||++|||++|+.||.+.+.... ..+..+ ..+.. ....+
T Consensus       163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (277)
T d1phka_         163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY  242 (277)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGS
T ss_pred             CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccC
Confidence            3  234459999999999863      4568899999999999999999999998873322 222221 11111 22468


Q ss_pred             cHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       333 ~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      |+++.+||.+||+.||++|||+.|+++|-+
T Consensus       243 s~~~~~li~~~L~~~p~~R~s~~eil~h~~  272 (277)
T d1phka_         243 SDTVKDLVSRFLVVQPQKRYTAEEALAHPF  272 (277)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence            999999999999999999999999998743

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=351.36  Aligned_cols=232  Identities=22%  Similarity=0.306  Sum_probs=184.7

Q ss_pred             ccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      ..+|++.+.||+|+||+||+|+++     ...||||+++.......+..+.|.+| .+|++++|||||+++|+|.+ +.+
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            457999999999999999999974     23789999987655555667789999 99999999999999999975 567


Q ss_pred             EEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      ++|||||++|+|.+++.. .+.+++..++.++.||++                  |||++.++.+||+|||+++......
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence            899999999999988765 467999999999999987                  9999999999999999999865332


Q ss_pred             ------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccc-cCCCCccCCCCcHHH
Q 039021          266 ------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSV-NFEPKFQISRCPNRL  336 (464)
Q Consensus       266 ------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~  336 (464)
                            ....|+..|+|||++.+..++.++|||||||++|||++ |+.||.+.+ .+....+.. +.+++. +..+|+++
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~l  244 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDI  244 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC-CTTCCHHH
T ss_pred             CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC-cccccHHH
Confidence                  22348889999999999999999999999999999998 899999887 333333322 223333 36789999


Q ss_pred             HHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+||.+||+.||++||||.+|++.|...
T Consensus       245 ~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         245 YNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            9999999999999999999999887653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-46  Score=354.54  Aligned_cols=231  Identities=16%  Similarity=0.275  Sum_probs=191.6

Q ss_pred             cccccccccccceeeeeEEeEEe--Cc----eEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GT----WVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~  204 (464)
                      .+|++++.||+|+||+||+|++.  |+    .||+|.++..  ...+..+.+.+| .+|++++|||||+++|+|.++ ..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~   85 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   85 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Ce
Confidence            46999999999999999999984  43    5888888753  223345678899 999999999999999999764 57


Q ss_pred             EEEEEecCCCChHHHHhh-ccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          205 ILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +++|||+.+|+|.+++.. ...+++..++.++.||++                  |||++.++.+||+|||+|+......
T Consensus        86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            788999999999988865 468999999999999987                  9999999999999999999875432


Q ss_pred             C-----CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc-cchhccccccCCCCccCCCCcHHHHH
Q 039021          266 P-----NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLKQ  338 (464)
Q Consensus       266 ~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (464)
                      .     ...||+.|||||++.+..|+.++|||||||++|||+| |..||.+.. .+....+..+.+++.+ ..+|+++.+
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p-~~~~~~~~~  244 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP-PICTIDVYM  244 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCC-TTBCHHHHH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC-cccCHHHHH
Confidence            1     2248999999999999999999999999999999998 899998876 3333344444444444 668999999


Q ss_pred             HHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          339 LIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       339 li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ||.+||+.||++|||+.+|+++|+.+..
T Consensus       245 li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         245 IMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999988754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-46  Score=353.35  Aligned_cols=231  Identities=22%  Similarity=0.315  Sum_probs=193.1

Q ss_pred             ccccccccccceeeeeEEeEEe--Cc--eEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GT--WVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|++.+.||+|+||+||+|+++  |.  .||||.++..  ...+..+.+.+| ++|+++ +|||||++++++.+.+.++|
T Consensus        11 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_          11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc--cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            6778899999999999999985  33  5788887643  223445678889 999998 79999999999999999999


Q ss_pred             EEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh------------------hhcccCCCceeE
Q 039021          207 ITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR------------------NLLQDEGDHLKI  252 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl  252 (464)
                      ||||+++|+|.++|+.+                ..+++..+..++.||++                  |||++.++.+||
T Consensus        89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl  168 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  168 (309)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEE
Confidence            99999999999999653                57999999999999987                  999999999999


Q ss_pred             ecchhhhhhcccCC--CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCC-CCCCCCc-cchhccccccCCCCcc
Q 039021          253 GEYWVQMFYEQIHP--NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGK-HLQTNNS-FDFMHLKSVNFEPKFQ  328 (464)
Q Consensus       253 ~DFG~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~-~p~~~~~-~~~~~~~~~~~~~~~~  328 (464)
                      +|||+|+.......  ...||..|+|||.+.+..|+.++|||||||++|||++|. .||.+.+ .+....+..+.++..+
T Consensus       169 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~  248 (309)
T d1fvra_         169 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP  248 (309)
T ss_dssp             CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCC
T ss_pred             ccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCC
Confidence            99999987664433  334899999999999999999999999999999999965 6787776 4444444444555544


Q ss_pred             CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          329 ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       329 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                       ..+|+++.+||.+||+.||++|||+.+|+++|+++.+
T Consensus       249 -~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         249 -LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             -TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             6689999999999999999999999999999999865

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.8e-46  Score=348.66  Aligned_cols=234  Identities=16%  Similarity=0.179  Sum_probs=194.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC----ce
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE----EM  204 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~----~~  204 (464)
                      .+|++.+.||+|+||+||+|++.  |+.||+|+++............+.+| ++|++++|||||++++++...+    .+
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            36999999999999999999984  89999999987666566667789999 9999999999999999998754    38


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--  264 (464)
                      |||||||+||+|.+++...+++++.+++.++.||+.                  |||++.++.+||+|||.++.....  
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~  166 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN  166 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----
T ss_pred             EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccc
Confidence            999999999999999998889999999999999987                  999999999999999998765422  


Q ss_pred             ----CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccccCC--CCccCCCCcHHHH
Q 039021          265 ----HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSVNFE--PKFQISRCPNRLK  337 (464)
Q Consensus       265 ----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~  337 (464)
                          .....||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ .+..........  +......+|+++.
T Consensus       167 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~  246 (277)
T d1o6ya_         167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD  246 (277)
T ss_dssp             ------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHH
T ss_pred             cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHH
Confidence                223459999999999999999999999999999999999999998877 333322222211  1222366899999


Q ss_pred             HHHHHHcccCCCCCC-CHHHHHHHHHHHH
Q 039021          338 QLIAQCTNKDPSKRP-TFAAVIITLEEVS  365 (464)
Q Consensus       338 ~li~~cl~~dp~~Rp-t~~~i~~~l~~~~  365 (464)
                      +||.+||++||++|| |+++++..|.++.
T Consensus       247 ~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         247 AVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            999999999999999 8999998887763

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.5e-46  Score=361.94  Aligned_cols=229  Identities=15%  Similarity=0.166  Sum_probs=189.8

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhH---HHH-HHHHhcCCCceeeeeceeeeCCceEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSA---KDN-CKLRELRHPNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~---~~e-~~l~~l~hpnIv~~~~~~~~~~~~~l  206 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|++.+...........+   .++ ++++.++|||||+++++|.+.+.+||
T Consensus         5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~i   84 (364)
T d1omwa3           5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF   84 (364)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred             hCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEE
Confidence            6899999999999999999984  89999999975432222222223   334 66777789999999999999999999


Q ss_pred             EEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc-CCC
Q 039021          207 ITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI-HPN  267 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~-~~~  267 (464)
                      |||||+||+|.+++.++..+++.+++.++.||+.                  |||++.+|.+||+|||+|+..... ...
T Consensus        85 vmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~  164 (364)
T d1omwa3          85 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA  164 (364)
T ss_dssp             EECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCS
T ss_pred             EEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcccc
Confidence            9999999999999998889999999999999987                  999999999999999999977643 334


Q ss_pred             CcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccch---hccccccCCCCccCCCCcHHHHHHHHHH
Q 039021          268 QENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF---MHLKSVNFEPKFQISRCPNRLKQLIAQC  343 (464)
Q Consensus       268 ~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~c  343 (464)
                      ..||+.|||||++.. ..|+.++|||||||++|||++|+.||.......   .........+.++ ..+|+++.+||.+|
T Consensus       165 ~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~li~~~  243 (364)
T d1omwa3         165 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP-DSFSPELRSLLEGL  243 (364)
T ss_dssp             CCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCC-SSSCHHHHHHHHHH
T ss_pred             cccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCC-CCCCHHHHHHHHHH
Confidence            569999999999964 678999999999999999999999998765221   1112222233333 56899999999999


Q ss_pred             cccCCCCCCC-----HHHHHHHHH
Q 039021          344 TNKDPSKRPT-----FAAVIITLE  362 (464)
Q Consensus       344 l~~dp~~Rpt-----~~~i~~~l~  362 (464)
                      |+.||++|||     +.++++|-+
T Consensus       244 L~~dP~~R~t~~~~~a~eil~Hp~  267 (364)
T d1omwa3         244 LQRDVNRRLGCLGRGAQEVKESPF  267 (364)
T ss_dssp             TCSSTTTSTTTSSSTHHHHHTSGG
T ss_pred             cccCHHHhCCCcccCHHHHHcCcc
Confidence            9999999999     799999854

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-45  Score=347.85  Aligned_cols=238  Identities=22%  Similarity=0.338  Sum_probs=195.3

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe---------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCcee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR---------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNIL  192 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv  192 (464)
                      .|.++..  +|++++.||+|+||.||+|++.         +..||||+++....  ......+.+| ..+.++ +|||||
T Consensus         7 ~~~i~~~--~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~e~~~l~~~~~HpnIv   82 (299)
T d1fgka_           7 RWELPRD--RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNII   82 (299)
T ss_dssp             TTBCCGG--GEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC--HHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cCcccHH--HeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC--hHHHHHHHHHHHHHHHhcCCCeEE
Confidence            3555544  7889999999999999999874         24799999986532  3445667777 778777 899999


Q ss_pred             eeeceeeeCCceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh----------------
Q 039021          193 QFLGSIVLGEEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR----------------  240 (464)
Q Consensus       193 ~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~----------------  240 (464)
                      +++++|.+++..++|||||++|+|.++|+.+                ..+++.+++.++.||+.                
T Consensus        83 ~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiK  162 (299)
T d1fgka_          83 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  162 (299)
T ss_dssp             CEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             ecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeec
Confidence            9999999999999999999999999999754                35899999999999987                


Q ss_pred             --hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc
Q 039021          241 --NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS  312 (464)
Q Consensus       241 --Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~  312 (464)
                        |||++.++.+||+|||+++......     ....||+.|+|||++.+..|+.++|||||||++|||++ |..||.+..
T Consensus       163 p~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~  242 (299)
T d1fgka_         163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  242 (299)
T ss_dssp             GGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence              9999999999999999999876443     22348999999999999999999999999999999998 799998877


Q ss_pred             cc-hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          313 FD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       313 ~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      .. ....+..+.++..+ ..+|+++.+||.+||+.||++|||+.||++.|+++.+
T Consensus       243 ~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         243 VEELFKLLKEGHRMDKP-SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHHHHHHHTTCCCCCC-SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCC-ccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            33 33333344445444 6789999999999999999999999999999998854

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-45  Score=347.00  Aligned_cols=238  Identities=15%  Similarity=0.261  Sum_probs=194.6

Q ss_pred             cccccccccccccceeeeeEEeEEe-----CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee-CC
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR-----GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL-GE  202 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~-~~  202 (464)
                      ....+.+.+.||+|+||+||+|++.     ...||||.++..  ......+.+.+| ++|++++|||||+++|++.+ ++
T Consensus        25 ~~~~~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~  102 (311)
T d1r0pa_          25 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG  102 (311)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT
T ss_pred             HHceeccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC
Confidence            3334444678999999999999983     236899999753  345566789999 99999999999999999876 46


Q ss_pred             ceEEEEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcc
Q 039021          203 EMILITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQ  263 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~  263 (464)
                      ..++|||||++|+|.+++... ..+++..++.++.|+++                  |||+++++.+||+|||+++....
T Consensus       103 ~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         103 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             EEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTT
T ss_pred             ceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccc
Confidence            789999999999999998754 56788899999999987                  99999999999999999987653


Q ss_pred             cC-------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--cchhccccccCCCCccCCCCcH
Q 039021          264 IH-------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKSVNFEPKFQISRCPN  334 (464)
Q Consensus       264 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~  334 (464)
                      ..       ....||+.|+|||.+....++.++||||||+++|||++|..||....  .+....+..+.++..+ ..+++
T Consensus       183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p-~~~~~  261 (311)
T d1r0pa_         183 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP-EYCPD  261 (311)
T ss_dssp             TTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCC-TTCCH
T ss_pred             cccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCc-ccCcH
Confidence            22       12348999999999999999999999999999999999877776543  3444444444454443 67899


Q ss_pred             HHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhcC
Q 039021          335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGR  370 (464)
Q Consensus       335 ~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~~  370 (464)
                      ++.+||.+||+.||++|||+.||+++|+.+...+..
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999765444

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-45  Score=349.74  Aligned_cols=239  Identities=18%  Similarity=0.215  Sum_probs=185.3

Q ss_pred             CCccccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceee
Q 039021          123 NEVNFDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQ  193 (464)
Q Consensus       123 ~~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~  193 (464)
                      ..|+++.  .+|++++.||+|+||+||+|++.       ++.||+|+++....  ....+.+.+| ..+.++ +|||||+
T Consensus         6 ~~wei~~--~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~~e~~~l~~~~~h~~iv~   81 (299)
T d1ywna1           6 SKWEFPR--DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVN   81 (299)
T ss_dssp             HHHBCCG--GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C--HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccccccH--HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--cHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            3455554  47899999999999999999984       36899999986432  3334556666 666665 7899999


Q ss_pred             eeceeeeC-CceEEEEEecCCCChHHHHhhc----------------cCCCHHHHHHHHHHHHh----------------
Q 039021          194 FLGSIVLG-EEMILITEYLPKGNLKGILSKK----------------VRLDLPTALRYALDIAR----------------  240 (464)
Q Consensus       194 ~~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~----------------~~l~~~~~~~~~~qi~~----------------  240 (464)
                      +++++.+. +.+++|||||++|+|.++++.+                ..+++.+++.++.||++                
T Consensus        82 ~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK  161 (299)
T d1ywna1          82 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  161 (299)
T ss_dssp             EEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCC
Confidence            99988764 5689999999999999999653                24899999999999987                


Q ss_pred             --hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhC-CCCCCCCc
Q 039021          241 --NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEG-KHLQTNNS  312 (464)
Q Consensus       241 --Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g-~~p~~~~~  312 (464)
                        |||+++++.+||+|||+|+......     ....||+.|||||++.+..++.++|||||||++|||++| ..||.+..
T Consensus       162 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~  241 (299)
T d1ywna1         162 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  241 (299)
T ss_dssp             GGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC
Confidence              9999999999999999998765322     233599999999999999999999999999999999996 56887765


Q ss_pred             -cc-hhccccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          313 -FD-FMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       313 -~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                       .+ .......+.++..+ ..+|+++.+||.+||+.||++|||+.||++||+.+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         242 IDEEFCRRLKEGTRMRAP-DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             CSHHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCC-ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             22 22333334444443 6689999999999999999999999999999998864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-46  Score=354.94  Aligned_cols=227  Identities=15%  Similarity=0.142  Sum_probs=192.7

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|.++  |+.||+|+++...    .....+.+| ++|++++|||||+++++|.+++.+|||||
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            6999999999999999999984  8899999998642    233467889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhcc-CCCHHHHHHHHHHHHh------------------hhcccCC--CceeEecchhhhhhcccC--C
Q 039021          210 YLPKGNLKGILSKKV-RLDLPTALRYALDIAR------------------NLLQDEG--DHLKIGEYWVQMFYEQIH--P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~------------------Nill~~~--~~~kl~DFG~a~~~~~~~--~  266 (464)
                      ||+||+|.+++..++ .+++.+++.|+.||+.                  |||++.+  ..+||+|||+++......  .
T Consensus        82 ~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~  161 (321)
T d1tkia_          82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR  161 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCccc
Confidence            999999999998654 7999999999999987                  9999854  479999999998765332  3


Q ss_pred             CCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccC---CCCcHHHHHHHHHH
Q 039021          267 NQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI---SRCPNRLKQLIAQC  343 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~c  343 (464)
                      ...||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+.......+......++.   ..+|+++.+||.+|
T Consensus       162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  241 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRL  241 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTT
T ss_pred             ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHH
Confidence            345999999999999999999999999999999999999999987733222222222222221   46899999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHH
Q 039021          344 TNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       344 l~~dp~~Rpt~~~i~~~l~~  363 (464)
                      |..||++|||+.|+++|-+.
T Consensus       242 L~~dp~~R~s~~eil~hp~~  261 (321)
T d1tkia_         242 LVKERKSRMTASEALQHPWL  261 (321)
T ss_dssp             SCSSGGGSCCHHHHHHSHHH
T ss_pred             ccCChhHCcCHHHHhcCHhh
Confidence            99999999999999999764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-45  Score=348.32  Aligned_cols=236  Identities=19%  Similarity=0.266  Sum_probs=199.1

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFL  195 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~  195 (464)
                      .|+++..  +|++++.||+|+||+||+|.++       ++.||||+++...  .......+.+| .++++++|||||+++
T Consensus        14 ~~ei~~~--~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~   89 (308)
T d1p4oa_          14 EWEVARE--KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLL   89 (308)
T ss_dssp             TTBCCGG--GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             ceeecHH--HeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcCCCCEeeee
Confidence            4677654  7888999999999999999874       4689999998642  34455678899 999999999999999


Q ss_pred             ceeeeCCceEEEEEecCCCChHHHHhhc----------cCCCHHHHHHHHHHHHh------------------hhcccCC
Q 039021          196 GSIVLGEEMILITEYLPKGNLKGILSKK----------VRLDLPTALRYALDIAR------------------NLLQDEG  247 (464)
Q Consensus       196 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~----------~~l~~~~~~~~~~qi~~------------------Nill~~~  247 (464)
                      +++...+..++|||||++|+|.+++...          ..+++..+..++.|+++                  |||++++
T Consensus        90 ~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~  169 (308)
T d1p4oa_          90 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED  169 (308)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT
T ss_pred             eEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC
Confidence            9999999999999999999999998643          34789999999999987                  9999999


Q ss_pred             CceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhC-CCCCCCCc-cchhcccc
Q 039021          248 DHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEG-KHLQTNNS-FDFMHLKS  320 (464)
Q Consensus       248 ~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g-~~p~~~~~-~~~~~~~~  320 (464)
                      +++||+|||+|+......     ....||+.|+|||.+.+..++.++|||||||++|||++| ..||.+.+ .+....+.
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~  249 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  249 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999999999998775432     223489999999999999999999999999999999997 57888777 34444444


Q ss_pred             ccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHH
Q 039021          321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV  364 (464)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~  364 (464)
                      .+..+..+ ..+|+.+.+||.+||+.||++|||+.+|+++|+..
T Consensus       250 ~~~~~~~p-~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         250 EGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             TTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             hCCCCCCc-ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            44444433 67899999999999999999999999999998654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=345.51  Aligned_cols=239  Identities=21%  Similarity=0.291  Sum_probs=198.1

Q ss_pred             CccccccccccccccccccceeeeeEEeEEe-------CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc-CCCceeee
Q 039021          124 EVNFDISELNTLHSSMVEQGVFGESQTAKWR-------GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL-RHPNILQF  194 (464)
Q Consensus       124 ~~~i~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l-~hpnIv~~  194 (464)
                      .|+++.  .+|++++.||+|+||.||+|+++       ++.||||+++...  .......+.+| .+++++ +|||||++
T Consensus        17 ~~~~~~--~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~   92 (311)
T d1t46a_          17 KWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNL   92 (311)
T ss_dssp             GGBCCG--GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCCH--HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEE
Confidence            354444  47888999999999999999974       4689999998653  24445678888 999999 79999999


Q ss_pred             eceeeeCCceEEEEEecCCCChHHHHhhcc------------------CCCHHHHHHHHHHHHh----------------
Q 039021          195 LGSIVLGEEMILITEYLPKGNLKGILSKKV------------------RLDLPTALRYALDIAR----------------  240 (464)
Q Consensus       195 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~------------------~l~~~~~~~~~~qi~~----------------  240 (464)
                      ++++.+.+.++||||||++|+|.++++...                  .+++..++.++.||++                
T Consensus        93 ~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLK  172 (311)
T d1t46a_          93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (311)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccc
Confidence            999999999999999999999999997542                  5899999999999987                


Q ss_pred             --hhcccCCCceeEecchhhhhhcccC-----CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc
Q 039021          241 --NLLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNS  312 (464)
Q Consensus       241 --Nill~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~-g~~p~~~~~  312 (464)
                        |||++.++.+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|||++ |.+||....
T Consensus       173 p~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~  252 (311)
T d1t46a_         173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (311)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             cccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC
Confidence              9999999999999999999876432     22348999999999999999999999999999999999 666666655


Q ss_pred             -cchhc-cccccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          313 -FDFMH-LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       313 -~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                       .+... ....+.++.. +..+|+++.+||.+||+.||++|||+.+|++.|++....
T Consensus       253 ~~~~~~~~i~~~~~~~~-~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         253 VDSKFYKMIKEGFRMLS-PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             SSHHHHHHHHHTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCC-cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence             23222 2233334443 366899999999999999999999999999999877543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-45  Score=349.79  Aligned_cols=223  Identities=16%  Similarity=0.130  Sum_probs=182.0

Q ss_pred             cccccc-ccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHh-cCCCceeeeeceeee----CCc
Q 039021          133 NTLHSS-MVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRE-LRHPNILQFLGSIVL----GEE  203 (464)
Q Consensus       133 ~~~~~~-~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~-l~hpnIv~~~~~~~~----~~~  203 (464)
                      +|.+.+ .||+|+||+||+|++.  ++.||+|+++..        ..+.+| .++.+ ++|||||+++++|.+    ...
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~   83 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   83 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence            687765 6999999999999984  889999999752        245667 77654 589999999999976    466


Q ss_pred             eEEEEEecCCCChHHHHhhc--cCCCHHHHHHHHHHHHh------------------hhcccC---CCceeEecchhhhh
Q 039021          204 MILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------NLLQDE---GDHLKIGEYWVQMF  260 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~------------------Nill~~---~~~~kl~DFG~a~~  260 (464)
                      +|||||||+||+|.++|..+  ..+++.+++.|+.||+.                  |||+++   .+.+||+|||+|+.
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeee
Confidence            89999999999999999764  47999999999999987                  999986   46799999999987


Q ss_pred             hccc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-ch---hccccccCCCCccC---CC
Q 039021          261 YEQI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DF---MHLKSVNFEPKFQI---SR  331 (464)
Q Consensus       261 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~---~~~~~~~~~~~~~~---~~  331 (464)
                      ....  .....||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+. ..   +..........++.   ..
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  243 (335)
T d2ozaa1         164 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE  243 (335)
T ss_dssp             CCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHH
T ss_pred             ccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCccccc
Confidence            6543  3445699999999999999999999999999999999999999987652 11   11122222222221   35


Q ss_pred             CcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       332 ~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      +|+++.+||.+||+.||++|||+.|+++|-+.
T Consensus       244 ~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~  275 (335)
T d2ozaa1         244 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI  275 (335)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHcCHHh
Confidence            78999999999999999999999999999664

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-44  Score=341.54  Aligned_cols=226  Identities=19%  Similarity=0.174  Sum_probs=180.9

Q ss_pred             ccccccceeeeeEEeEEe--CceEEEEEeeccCCch--HHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEec
Q 039021          137 SSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP--VKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       137 ~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~--~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      ++.||+|+||+||+|+++  |+.||||+++......  ......+.+| .+|++++|||||++++++.+++.+|||||||
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            478999999999999984  8899999997643221  1223467889 9999999999999999999999999999999


Q ss_pred             CCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCcC
Q 039021          212 PKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQEN  270 (464)
Q Consensus       212 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~g  270 (464)
                      .++++..+...+..+++.++..++.||+.                  |||++.++.+||+|||+|+......   ....|
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~g  162 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV  162 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCC
T ss_pred             cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceec
Confidence            99888877777788999999999999987                  9999999999999999998776432   34459


Q ss_pred             CCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhccccc----------------------cCCCC
Q 039021          271 SQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKSV----------------------NFEPK  326 (464)
Q Consensus       271 t~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~~----------------------~~~~~  326 (464)
                      |+.|+|||++.. ..|+.++|||||||++|||++|..||.+.. .+.+..+..                      ...+.
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (299)
T d1ua2a_         163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG  242 (299)
T ss_dssp             CCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCC
T ss_pred             ChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCC
Confidence            999999999865 568999999999999999999999998765 221111100                      00000


Q ss_pred             cc----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          327 FQ----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       327 ~~----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+    ...+++++.+||.+||+.||++|||++|+++|-+
T Consensus       243 ~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~  282 (299)
T d1ua2a_         243 IPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY  282 (299)
T ss_dssp             CCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred             CChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence            00    1346899999999999999999999999998854

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=338.88  Aligned_cols=225  Identities=15%  Similarity=0.179  Sum_probs=187.5

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchH---HHHHhHHHH-HHHHhcC--CCceeeeeceeeeCC
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPV---KMVLSAKDN-CKLRELR--HPNILQFLGSIVLGE  202 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~---~~~~~~~~e-~~l~~l~--hpnIv~~~~~~~~~~  202 (464)
                      +.+|++++.||+|+||+||+|++.  |+.||+|++........   ....++.+| .+|++++  |||||++++++.+++
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            347999999999999999999984  89999999986543221   122346788 9999996  899999999999999


Q ss_pred             ceEEEEEecCC-CChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCC-CceeEecchhhhhhc
Q 039021          203 EMILITEYLPK-GNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEG-DHLKIGEYWVQMFYE  262 (464)
Q Consensus       203 ~~~lv~E~~~~-g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~-~~~kl~DFG~a~~~~  262 (464)
                      ..++||||+.+ +++.+++..++.+++.+++.++.||+.                  |||++.+ +.+||+|||+|+...
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecc
Confidence            99999999976 688899988889999999999999987                  9999854 789999999998765


Q ss_pred             ccC-CCCcCCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCCccchhccccccCCCCccCCCCcHHHHHHH
Q 039021          263 QIH-PNQENSQRNDNSSIASNVLD-DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLI  340 (464)
Q Consensus       263 ~~~-~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  340 (464)
                      ... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...+. ...     ....++ ..+|+++.+||
T Consensus       163 ~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-i~~-----~~~~~~-~~~s~~~~~li  235 (273)
T d1xwsa_         163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-IIR-----GQVFFR-QRVSSECQHLI  235 (273)
T ss_dssp             SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHH-----CCCCCS-SCCCHHHHHHH
T ss_pred             cccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-Hhh-----cccCCC-CCCCHHHHHHH
Confidence            433 44569999999999987665 5679999999999999999999986541 111     112222 56899999999


Q ss_pred             HHHcccCCCCCCCHHHHHHHHH
Q 039021          341 AQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       341 ~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      .+||+.||++|||++|+++|.+
T Consensus       236 ~~~L~~dp~~R~s~~eil~hp~  257 (273)
T d1xwsa_         236 RWCLALRPSDRPTFEEIQNHPW  257 (273)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHccCCHhHCcCHHHHhcCHh
Confidence            9999999999999999998854

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-44  Score=338.64  Aligned_cols=230  Identities=18%  Similarity=0.288  Sum_probs=178.5

Q ss_pred             ccccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC----ceEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE----EMILI  207 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~----~~~lv  207 (464)
                      +|.+.+.||+|+||.||+|+++|+.||||+++..    .........| ..+++++|||||++++++.+.+    .+++|
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~----~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc----chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            5788899999999999999999999999999753    1111122234 4556789999999999998654    58999


Q ss_pred             EEecCCCChHHHHhhccCCCHHHHHHHHHHHHh--------------------------hhcccCCCceeEecchhhhhh
Q 039021          208 TEYLPKGNLKGILSKKVRLDLPTALRYALDIAR--------------------------NLLQDEGDHLKIGEYWVQMFY  261 (464)
Q Consensus       208 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~--------------------------Nill~~~~~~kl~DFG~a~~~  261 (464)
                      ||||++|+|.+++++. .+++..++.++.|+++                          |||++.++.+||+|||+++..
T Consensus        80 ~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~  158 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             EecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence            9999999999999865 7999999999999985                          999999999999999999876


Q ss_pred             cccC-------CCCcCCCCcccccccccCC------CCCcccchhHHHHHHHHHhCCCCCCCCccc-h------------
Q 039021          262 EQIH-------PNQENSQRNDNSSIASNVL------DDTKKDICSFGYIFYQMLEGKHLQTNNSFD-F------------  315 (464)
Q Consensus       262 ~~~~-------~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~------------  315 (464)
                      ....       ....||+.|||||++.+..      ++.++|||||||+||||+||..||...... .            
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T d1vjya_         159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence            5322       2345999999999987643      567899999999999999998877543200 0            


Q ss_pred             --hcc--ccccCCCCccC----CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHH
Q 039021          316 --MHL--KSVNFEPKFQI----SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSAC  367 (464)
Q Consensus       316 --~~~--~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~  367 (464)
                        ...  .....++.++.    ...+..+.+|+.+||+.||++|||+.||+++|+.+.+.
T Consensus       239 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence              000  01111222211    22345799999999999999999999999999988643

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-42  Score=329.41  Aligned_cols=228  Identities=22%  Similarity=0.310  Sum_probs=181.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|+++  |+.||+|+++.... .......+.+| ++|++++|||||++++++.+++.+|+|||
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999985  89999999975432 22335678889 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHh--hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---C
Q 039021          210 YLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---P  266 (464)
Q Consensus       210 ~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~  266 (464)
                      |+.++ +.+++.  ....+++.+++.++.||+.                  |||++.++.+||+|||+|+......   .
T Consensus        82 ~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~  160 (298)
T d1gz8a_          82 FLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT  160 (298)
T ss_dssp             CCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred             ecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccce
Confidence            99864 444443  3467999999999999987                  9999999999999999999876433   2


Q ss_pred             CCcCCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc-----------------ccCCCCc
Q 039021          267 NQENSQRNDNSSIASNVL-DDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS-----------------VNFEPKF  327 (464)
Q Consensus       267 ~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~-----------------~~~~~~~  327 (464)
                      ...||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+ .+....+.                 ......+
T Consensus       161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T d1gz8a_         161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF  240 (298)
T ss_dssp             CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred             eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccc
Confidence            335999999999887755 5789999999999999999999998765 11111100                 0000000


Q ss_pred             ----------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 ----------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 ----------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                ....+++++.+||.+||+.||++|||+.|+++|-+
T Consensus       241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~f  285 (298)
T d1gz8a_         241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF  285 (298)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             ccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHh
Confidence                      01356889999999999999999999999999843

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.2e-42  Score=326.68  Aligned_cols=229  Identities=19%  Similarity=0.164  Sum_probs=187.3

Q ss_pred             ccccccccccceeeeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEEe
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITEY  210 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  210 (464)
                      +|++.+.||+|+||+||+|+++ |+.||+|+++.... .......+.+| .+|++++|||||++++++.+++..+++|||
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            7899999999999999999985 89999999976532 23335678889 999999999999999999999999999999


Q ss_pred             cCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCCc
Q 039021          211 LPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQE  269 (464)
Q Consensus       211 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~~  269 (464)
                      +.++.+..+....+.+++..+..++.||+.                  |||++.++.+||+|||+|.......   ....
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~  161 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI  161 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceec
Confidence            998888888777889999999999999987                  9999999999999999999876432   2334


Q ss_pred             CCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc---------------------------
Q 039021          270 NSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS---------------------------  320 (464)
Q Consensus       270 gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~---------------------------  320 (464)
                      |++.|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+ .+....+.                           
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T d1ob3a_         162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (286)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             ccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccc
Confidence            9999999999876 557899999999999999999999998664 11111000                           


Q ss_pred             ccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                      ...........+++++.+||++||+.||++|||++|+++|.+
T Consensus       242 ~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~  283 (286)
T d1ob3a_         242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY  283 (286)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             cCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            000000112457899999999999999999999999998743

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-42  Score=327.16  Aligned_cols=233  Identities=17%  Similarity=0.193  Sum_probs=182.1

Q ss_pred             ccccccccccccccceeeeeEEeEEe---CceEEEEEeeccCCchHHHHHhHHHH-HHHHhc---CCCceeeeeceeee-
Q 039021          129 ISELNTLHSSMVEQGVFGESQTAKWR---GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLREL---RHPNILQFLGSIVL-  200 (464)
Q Consensus       129 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l---~hpnIv~~~~~~~~-  200 (464)
                      ..+.+|++++.||+|+||+||+|++.   ++.||+|+++...... .....+.+| .+|+.|   +|||||+++++|.. 
T Consensus         4 ~~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~   82 (305)
T d1blxa_           4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   82 (305)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             CCcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-hHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccc
Confidence            45568999999999999999999983   5679999997643222 112234455 665554   89999999999864 


Q ss_pred             ----CCceEEEEEecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchh
Q 039021          201 ----GEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWV  257 (464)
Q Consensus       201 ----~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~  257 (464)
                          ...++++|||+.+|++..... ....+++..++.++.|++.                  |||+++++.+||+|||+
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          83 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             ccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhh
Confidence                346899999999877654443 3467999999999999987                  99999999999999999


Q ss_pred             hhhhccc--CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc--------------
Q 039021          258 QMFYEQI--HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS--------------  320 (464)
Q Consensus       258 a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~--------------  320 (464)
                      ++.....  .....||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+. +....+.              
T Consensus       163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence            9876532  3455699999999999999999999999999999999999999987651 1111100              


Q ss_pred             ---------cc--CCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 ---------VN--FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 ---------~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                               ..  .........+++++.+||.+||+.||++|||+.|+++|.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpf  295 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY  295 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence                     00  0000012457899999999999999999999999999854

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-42  Score=330.69  Aligned_cols=229  Identities=19%  Similarity=0.231  Sum_probs=188.9

Q ss_pred             ccccccccccceeeeeEEeEE-----eCceEEEEEeeccCCc-hHHHHHhHHHH-HHHHhcCC-CceeeeeceeeeCCce
Q 039021          133 NTLHSSMVEQGVFGESQTAKW-----RGTWVVKTVIKSHIYH-PVKMVLSAKDN-CKLRELRH-PNILQFLGSIVLGEEM  204 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~~e-~~l~~l~h-pnIv~~~~~~~~~~~~  204 (464)
                      +|++++.||+|+||+||+|++     +|+.||+|++++.... .....+.+.+| ++|++++| |||+++++++.+...+
T Consensus        25 ~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~  104 (322)
T d1vzoa_          25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL  104 (322)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCce
Confidence            699999999999999999987     2789999999754321 22334567889 99999976 8999999999999999


Q ss_pred             EEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc--
Q 039021          205 ILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       205 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~--  264 (464)
                      ++||||+.+|+|.+++...+.+++..+..++.||+.                  |||++.++.+||+|||+|+.....  
T Consensus       105 ~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~  184 (322)
T d1vzoa_         105 HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET  184 (322)
T ss_dssp             EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG
T ss_pred             eeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhccccc
Confidence            999999999999999998889999999999999987                  999999999999999999876432  


Q ss_pred             --CCCCcCCCCcccccccccC--CCCCcccchhHHHHHHHHHhCCCCCCCCcc-ch---hccccccCCCCccCCCCcHHH
Q 039021          265 --HPNQENSQRNDNSSIASNV--LDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DF---MHLKSVNFEPKFQISRCPNRL  336 (464)
Q Consensus       265 --~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~  336 (464)
                        .....|++.|++||.+.+.  .++.++|||||||+||||++|+.||.+... ..   +........+.++ ..+|+++
T Consensus       185 ~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~-~~~s~~~  263 (322)
T d1vzoa_         185 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP-QEMSALA  263 (322)
T ss_dssp             GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC-TTSCHHH
T ss_pred             ccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCc-ccCCHHH
Confidence              2334599999999998764  468899999999999999999999987652 21   1111122233333 5689999


Q ss_pred             HHHHHHHcccCCCCCC-----CHHHHHHHHH
Q 039021          337 KQLIAQCTNKDPSKRP-----TFAAVIITLE  362 (464)
Q Consensus       337 ~~li~~cl~~dp~~Rp-----t~~~i~~~l~  362 (464)
                      .+||.+||++||++||     |++|+++|.+
T Consensus       264 ~~li~~~l~~dP~~R~s~~~~t~~eil~Hpf  294 (322)
T d1vzoa_         264 KDLIQRLLMKDPKKRLGCGPRDADEIKEHLF  294 (322)
T ss_dssp             HHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred             HHHHHHHcccCHHHcCCCCcccHHHHHcCHh
Confidence            9999999999999999     4899998754

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-41  Score=326.42  Aligned_cols=228  Identities=17%  Similarity=0.167  Sum_probs=182.6

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE------  202 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~------  202 (464)
                      .+|++++.||+|+||+||+|+++  |+.||+|+++.... .....+.+.+| ++|++++|||||+++++|...+      
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            47999999999999999999985  89999999986543 34556778889 9999999999999999998654      


Q ss_pred             ceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc
Q 039021          203 EMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI  264 (464)
Q Consensus       203 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~  264 (464)
                      .+||||||| +++|..+++ ++.+++..++.++.||+.                  |||++.++.+||+|||+|+.....
T Consensus        97 ~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~  174 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE  174 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             eEEEEEecc-cccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCc
Confidence            479999999 557777665 458999999999999987                  999999999999999999988877


Q ss_pred             CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhcccc----------------------
Q 039021          265 HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLKS----------------------  320 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~~----------------------  320 (464)
                      .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+. .......                      
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (346)
T d1cm8a_         175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY  254 (346)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred             cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhh
Confidence            777789999999999876 4568999999999999999999999987651 1110000                      


Q ss_pred             -----ccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 -----VNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 -----~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                           ......+  ....+++++.+||.+||..||++|||+.|+++|-+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~  303 (346)
T d1cm8a_         255 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  303 (346)
T ss_dssp             HHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             hccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence                 0000001  11457899999999999999999999999999854

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=319.38  Aligned_cols=230  Identities=15%  Similarity=0.129  Sum_probs=180.2

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee--------
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL--------  200 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~--------  200 (464)
                      .+|++++.||+|+||+||+|+++  |+.||||++...... ......+.+| .+|++++||||+++++++..        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            37999999999999999999984  899999998764332 2334567789 99999999999999999865        


Q ss_pred             CCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhc
Q 039021          201 GEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYE  262 (464)
Q Consensus       201 ~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~  262 (464)
                      .+.+++|||||.++.+..+......+++..+..++.|++.                  |||++.++.+||+|||+++...
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence            3468999999998777766666788999999999999987                  9999999999999999997655


Q ss_pred             cc-------CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hcc---ccccCCCCc---
Q 039021          263 QI-------HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHL---KSVNFEPKF---  327 (464)
Q Consensus       263 ~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~---~~~~~~~~~---  327 (464)
                      ..       .....||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+..... ...   ......+..   
T Consensus       169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (318)
T d3blha1         169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN  248 (318)
T ss_dssp             C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccc
Confidence            21       223459999999999876 478999999999999999999999998755111 110   000000000   


Q ss_pred             ------------------------cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          328 ------------------------QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       328 ------------------------~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                                              .....++++.+||.+||+.||++|||++|+++|-+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf  307 (318)
T d3blha1         249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  307 (318)
T ss_dssp             CCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             cchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence                                    00113678889999999999999999999999865

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-40  Score=320.75  Aligned_cols=226  Identities=19%  Similarity=0.153  Sum_probs=178.6

Q ss_pred             cccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----
Q 039021          130 SELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----  201 (464)
Q Consensus       130 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----  201 (464)
                      .+.+|+..++||+|+||+||+|+++  |+.||||++....       ....+| ++|++++|||||+++++|...     
T Consensus        18 ~~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~   90 (350)
T d1q5ka_          18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD   90 (350)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-------SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCS
T ss_pred             ccCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc-------hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCC
Confidence            3457999999999999999999994  8899999998642       134568 999999999999999998643     


Q ss_pred             -CceEEEEEecCCCChHHH---HhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhh
Q 039021          202 -EEMILITEYLPKGNLKGI---LSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQ  258 (464)
Q Consensus       202 -~~~~lv~E~~~~g~L~~~---l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a  258 (464)
                       .+++||||||++|.+..+   ......+++.+++.++.||+.                  |||++.++ .+||+|||++
T Consensus        91 ~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a  170 (350)
T d1q5ka_          91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA  170 (350)
T ss_dssp             CCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTC
T ss_pred             ceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccch
Confidence             347899999987643332   234568999999999999987                  99999775 8999999999


Q ss_pred             hhhccc--CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc-cchhcccc--------------
Q 039021          259 MFYEQI--HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNS-FDFMHLKS--------------  320 (464)
Q Consensus       259 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~-~~~~~~~~--------------  320 (464)
                      +.....  ..+..||+.|+|||++.+ ..|+.++|||||||++|||++|+.||...+ .+....+.              
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             EECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             hhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence            876533  344569999999998865 578999999999999999999999998765 11111100              


Q ss_pred             -----ccCCC--------CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 -----VNFEP--------KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 -----~~~~~--------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                           ....+        ......+++++.+||.+||+.||++|||+.|+++|-+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  305 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  305 (350)
T ss_dssp             CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence                 00000        0112457899999999999999999999999999854

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-40  Score=317.46  Aligned_cols=227  Identities=17%  Similarity=0.157  Sum_probs=179.1

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCC----ceE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGE----EMI  205 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~----~~~  205 (464)
                      +|++++.||+|+||+||+|+++  |+.||||++....  .....+.+.+| ++|++++|||||++++++....    ..+
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            5999999999999999999985  9999999997542  34456678889 9999999999999999997653    234


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhccc---
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQI---  264 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~---  264 (464)
                      +++||+.+|+|.+++..+ .+++..++.++.|++.                  |||++.++.+||+|||+|+.....   
T Consensus        87 ~l~~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~  165 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH  165 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred             EEEEeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCcc
Confidence            556677799999999764 7999999999999987                  999999999999999999875432   


Q ss_pred             ---CCCCcCCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCcc-chhccc--------------------
Q 039021          265 ---HPNQENSQRNDNSSIASN-VLDDTKKDICSFGYIFYQMLEGKHLQTNNSF-DFMHLK--------------------  319 (464)
Q Consensus       265 ---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~-~~~~~~--------------------  319 (464)
                         .....||+.|+|||++.. ..++.++||||+||++|+|++|+.||.+... ......                    
T Consensus       166 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
T d1pmea_         166 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA  245 (345)
T ss_dssp             CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred             ceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhh
Confidence               233449999999999854 6678999999999999999999999987651 111000                    


Q ss_pred             -------cccCCCCc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          320 -------SVNFEPKF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       320 -------~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                             .......+  ..+.+++++.+|+.+||+.||++|||+.|+++|-+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf  297 (345)
T d1pmea_         246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  297 (345)
T ss_dssp             HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             hcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence                   00000000  11457889999999999999999999999999853

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-40  Score=311.51  Aligned_cols=229  Identities=16%  Similarity=0.143  Sum_probs=189.0

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeCCceEEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLGEEMILITE  209 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~~~~~lv~E  209 (464)
                      +|++++.||+|+||+||+|++.  ++.||||+++.... .......+.+| .+|+.++|||||++++++.+....++|||
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            6999999999999999999984  88999999986543 34456788899 99999999999999999999999999999


Q ss_pred             ecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC---CCC
Q 039021          210 YLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH---PNQ  268 (464)
Q Consensus       210 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~---~~~  268 (464)
                      |+.+++|..++...+.+++..++.++.|++.                  |||++.++.+||+|||.|+......   ...
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~  161 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceee
Confidence            9999999999988889999999999999987                  9999999999999999998776432   233


Q ss_pred             cCCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCCc--cchhcccc-------------------------
Q 039021          269 ENSQRNDNSSIASNVL-DDTKKDICSFGYIFYQMLEGKHLQTNNS--FDFMHLKS-------------------------  320 (464)
Q Consensus       269 ~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~el~~g~~p~~~~~--~~~~~~~~-------------------------  320 (464)
                      .+++.|+|||++.... ++.++|||||||++|||++|+.||....  .+......                         
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
T d1unla_         162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM  241 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred             ccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccccc
Confidence            4888999999987654 6899999999999999999999875432  11111100                         


Q ss_pred             --ccCCCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          321 --VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       321 --~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                        ...........+++.+.+||++||+.||.+|||++|+++|-+
T Consensus       242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~  285 (292)
T d1unla_         242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             ccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChh
Confidence              000001112456889999999999999999999999998854

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1e-39  Score=308.94  Aligned_cols=233  Identities=13%  Similarity=0.100  Sum_probs=189.1

Q ss_pred             ccccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCC-CceeeeeceeeeCCceEE
Q 039021          131 ELNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRH-PNILQFLGSIVLGEEMIL  206 (464)
Q Consensus       131 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~h-pnIv~~~~~~~~~~~~~l  206 (464)
                      ..+|++++.||+|+||+||+|++.  |+.||+|++.....     ...+.+| +.++.++| +||+++++++.++...++
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~   78 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   78 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEE
Confidence            347999999999999999999984  88999999876421     2356778 89999965 899999999999999999


Q ss_pred             EEEecCCCChHHHHhhc-cCCCHHHHHHHHHHHHh------------------hhcccC-----CCceeEecchhhhhhc
Q 039021          207 ITEYLPKGNLKGILSKK-VRLDLPTALRYALDIAR------------------NLLQDE-----GDHLKIGEYWVQMFYE  262 (464)
Q Consensus       207 v~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~------------------Nill~~-----~~~~kl~DFG~a~~~~  262 (464)
                      ||||+ +|+|.+++... ..+++.++..++.|++.                  |||++.     .+.+||+|||+|+...
T Consensus        79 vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          79 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             EEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            99999 67999998764 57999999999999987                  999974     5679999999998765


Q ss_pred             cc----------CCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc----hhcccc---ccCCC
Q 039021          263 QI----------HPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD----FMHLKS---VNFEP  325 (464)
Q Consensus       263 ~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~----~~~~~~---~~~~~  325 (464)
                      ..          .....||+.|||||++.+..++.++|||||||++|||++|+.||.+....    ......   ....+
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL  237 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh
Confidence            32          12334999999999999999999999999999999999999999875411    111111   11111


Q ss_pred             CccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHHhc
Q 039021          326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG  369 (464)
Q Consensus       326 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~~~~  369 (464)
                      ......+|+++.+++..||..+|++||+++.+.+.|+.+.....
T Consensus       238 ~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~  281 (293)
T d1csna_         238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  281 (293)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcC
Confidence            11125689999999999999999999999999988888765443

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-40  Score=319.55  Aligned_cols=229  Identities=18%  Similarity=0.157  Sum_probs=183.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeeeC-----Cc
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVLG-----EE  203 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~~-----~~  203 (464)
                      .+|++++.||+|+||+||+|++.  |+.||||+++..... ....+.+.+| ++|++++|||||++++++...     ..
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcC-hHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46999999999999999999984  899999999865433 3345567889 999999999999999998643     33


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      .+++|||+.+|+|.+++.. +++++.+++.++.||+.                  |||++.++.+|++|||+|.......
T Consensus        97 ~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~  175 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM  175 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGG
T ss_pred             eEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCccc
Confidence            4667788889999999965 47999999999999987                  9999999999999999999888777


Q ss_pred             CCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccc-hhccccc--c-------------------
Q 039021          266 PNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-FMHLKSV--N-------------------  322 (464)
Q Consensus       266 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-~~~~~~~--~-------------------  322 (464)
                      .+..||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.. ....+..  .                   
T Consensus       176 ~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  255 (348)
T d2gfsa1         176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI  255 (348)
T ss_dssp             SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHH
T ss_pred             ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhh
Confidence            778899999999987765 4688999999999999999999999876511 1111000  0                   


Q ss_pred             ----CCC--Cc--cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          323 ----FEP--KF--QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       323 ----~~~--~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                          ..+  .+  ....+++++.+||.+||+.||++|||+.|+++|-+
T Consensus       256 ~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~  303 (348)
T d2gfsa1         256 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  303 (348)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             hhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHh
Confidence                000  00  01357899999999999999999999999999865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-39  Score=309.17  Aligned_cols=228  Identities=13%  Similarity=0.122  Sum_probs=179.2

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc-eeeeeceeeeCCceEEEE
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN-ILQFLGSIVLGEEMILIT  208 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn-Iv~~~~~~~~~~~~~lv~  208 (464)
                      +|++++.||+|+||+||+|++.  |+.||||++.....     ...+..| +++++++|+| |+.+.+++.+.+..++||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence            5999999999999999999985  88999999886422     2356778 9999998766 555566667788899999


Q ss_pred             EecCCCChHHHHh-hccCCCHHHHHHHHHHHHh------------------hhccc---CCCceeEecchhhhhhcccC-
Q 039021          209 EYLPKGNLKGILS-KKVRLDLPTALRYALDIAR------------------NLLQD---EGDHLKIGEYWVQMFYEQIH-  265 (464)
Q Consensus       209 E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~------------------Nill~---~~~~~kl~DFG~a~~~~~~~-  265 (464)
                      ||+. |+|.+.+. ..+.+++..++.++.|++.                  |||++   .+..+||+|||+|+...... 
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          83 ELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             ECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             EEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            9995 46666654 4568999999999999987                  99865   34579999999999875322 


Q ss_pred             ---------CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccch-hccc----cc--cCCCCccC
Q 039021          266 ---------PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF-MHLK----SV--NFEPKFQI  329 (464)
Q Consensus       266 ---------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~-~~~~----~~--~~~~~~~~  329 (464)
                               ....||+.|||||++.+..++.++|||||||++|||++|+.||....... ....    ..  ..+.....
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  241 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHT
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhc
Confidence                     23359999999999999999999999999999999999999998765211 1111    00  11111122


Q ss_pred             CCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHH
Q 039021          330 SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA  366 (464)
Q Consensus       330 ~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~~~~  366 (464)
                      ..+|+++.+||.+||+.||++||++.++.+.|+.+..
T Consensus       242 ~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         242 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999888877643

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.2e-39  Score=312.01  Aligned_cols=222  Identities=15%  Similarity=0.108  Sum_probs=178.9

Q ss_pred             cccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeC--CceE
Q 039021          132 LNTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLG--EEMI  205 (464)
Q Consensus       132 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~--~~~~  205 (464)
                      .+|++++.||+|+||+||+|++.  |+.||+|+++...      .+.+.+| ++|++++ ||||++++++|...  ..++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~  108 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  108 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence            36999999999999999999984  8999999997531      3467789 9999995 99999999999854  5699


Q ss_pred             EEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCC-ceeEecchhhhhhccc--
Q 039021          206 LITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGD-HLKIGEYWVQMFYEQI--  264 (464)
Q Consensus       206 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~-~~kl~DFG~a~~~~~~--  264 (464)
                      +|||||.+|+|.++.   +.+++.+++.++.||+.                  |||++.++ .+||+|||+|+.....  
T Consensus       109 ~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~  185 (328)
T d3bqca1         109 LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  185 (328)
T ss_dssp             EEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC
T ss_pred             EEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc
Confidence            999999999997764   47999999999999987                  99998655 6999999999877643  


Q ss_pred             CCCCcCCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCccch--hccc----------------------
Q 039021          265 HPNQENSQRNDNSSIASNV-LDDTKKDICSFGYIFYQMLEGKHLQTNNSFDF--MHLK----------------------  319 (464)
Q Consensus       265 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~--~~~~----------------------  319 (464)
                      .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.......  ....                      
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  265 (328)
T d3bqca1         186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP  265 (328)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCG
T ss_pred             ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCc
Confidence            3344599999999998764 57999999999999999999999997643110  0000                      


Q ss_pred             -----c-ccC-------CCCccCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHH
Q 039021          320 -----S-VNF-------EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE  362 (464)
Q Consensus       320 -----~-~~~-------~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~  362 (464)
                           . ...       ........+++++.+||++||+.||++|||++|+++|.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~  321 (328)
T d3bqca1         266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY  321 (328)
T ss_dssp             GGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             ccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence                 0 000       000111347899999999999999999999999999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-39  Score=313.59  Aligned_cols=227  Identities=15%  Similarity=0.108  Sum_probs=173.5

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCceeeeeceeee------CCc
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIVL------GEE  203 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpnIv~~~~~~~~------~~~  203 (464)
                      +|++++.||+|+||+||+|+++  |+.||||++...... .....++.+| .+|++++|||||+++++|..      ...
T Consensus        18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcC-HHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            6999999999999999999985  899999999876543 4455678889 99999999999999999964      357


Q ss_pred             eEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhhhhcccC
Q 039021          204 MILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIH  265 (464)
Q Consensus       204 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~~~~~~~  265 (464)
                      +|+|||||.++ +.+.+.  ..+++.+++.++.|++.                  |||++.++.+|++|||+++......
T Consensus        97 ~~iv~Ey~~~~-l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~  173 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  173 (355)
T ss_dssp             EEEEEECCSEE-HHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             eEEEEeccchH-HHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc
Confidence            89999999764 445543  47999999999999987                  9999999999999999988766433


Q ss_pred             --CCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccchh-cccc---c------------------
Q 039021          266 --PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFM-HLKS---V------------------  321 (464)
Q Consensus       266 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~~~-~~~~---~------------------  321 (464)
                        ....||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.... ..+.   .                  
T Consensus       174 ~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T d2b1pa1         174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  253 (355)
T ss_dssp             -------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHH
T ss_pred             ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHh
Confidence              334599999999999999999999999999999999999999986651110 0000   0                  


Q ss_pred             cCCCCc--------------c-----CCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q 039021          322 NFEPKF--------------Q-----ISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE  363 (464)
Q Consensus       322 ~~~~~~--------------~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l~~  363 (464)
                      ...+..              +     ....++++.+||++||..||++|||++|+++|.+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~  314 (355)
T d2b1pa1         254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI  314 (355)
T ss_dssp             HTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred             hcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence            000000              0     01246789999999999999999999999999643

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-33  Score=275.91  Aligned_cols=226  Identities=14%  Similarity=0.146  Sum_probs=172.3

Q ss_pred             ccccccccccceeeeeEEeEEe--CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-----------CCceeeeecee
Q 039021          133 NTLHSSMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-----------HPNILQFLGSI  198 (464)
Q Consensus       133 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-----------hpnIv~~~~~~  198 (464)
                      +|++++.||+|+||+||+|++.  |+.||||+++..    ....+.+.+| .+++.++           |+|||++++++
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~----~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc----ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            5999999999999999999984  899999999864    2233456667 7777664           68899999988


Q ss_pred             eeC--CceEEEEEecCCCChHHHH---hhccCCCHHHHHHHHHHHHh-------------------hhcccCCCc-----
Q 039021          199 VLG--EEMILITEYLPKGNLKGIL---SKKVRLDLPTALRYALDIAR-------------------NLLQDEGDH-----  249 (464)
Q Consensus       199 ~~~--~~~~lv~E~~~~g~L~~~l---~~~~~l~~~~~~~~~~qi~~-------------------Nill~~~~~-----  249 (464)
                      ...  ...+++|+++..+......   .....+++..+..++.||++                   |||++.++.     
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccc
Confidence            753  5677788887665533222   23468899999999999976                   999987654     


Q ss_pred             -eeEecchhhhhhcccCCCCcCCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCccc-------hhccc--
Q 039021          250 -LKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD-------FMHLK--  319 (464)
Q Consensus       250 -~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el~~g~~p~~~~~~~-------~~~~~--  319 (464)
                       +||+|||.|+..........||+.|+|||++.+..|+.++||||+||++++|++|+.||......       .....  
T Consensus       170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~  249 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  249 (362)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence             99999999998877777778999999999999999999999999999999999999999754310       00000  


Q ss_pred             ccc------------------------CCCC-------------c-cCCCCcHHHHHHHHHHcccCCCCCCCHHHHHHHH
Q 039021          320 SVN------------------------FEPK-------------F-QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL  361 (464)
Q Consensus       320 ~~~------------------------~~~~-------------~-~~~~~~~~~~~li~~cl~~dp~~Rpt~~~i~~~l  361 (464)
                      ..+                        ....             . .....++++.+||.+||..||.+|||++|+++|-
T Consensus       250 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp  329 (362)
T d1q8ya_         250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP  329 (362)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred             HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            000                        0000             0 0022467899999999999999999999999885


Q ss_pred             H
Q 039021          362 E  362 (464)
Q Consensus       362 ~  362 (464)
                      +
T Consensus       330 ~  330 (362)
T d1q8ya_         330 W  330 (362)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=1.4e-20  Score=151.52  Aligned_cols=98  Identities=27%  Similarity=0.338  Sum_probs=93.8

Q ss_pred             chHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchH
Q 039021           16 IGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRD   95 (464)
Q Consensus        16 ~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~   95 (464)
                      .|||++|+..|++++++.|+++|+|+|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCccccccCC
Q 039021           96 ICRILEVNGGKDFIHDQP  113 (464)
Q Consensus        96 iv~~L~~~g~~~~~~~~p  113 (464)
                      ++++|+++|++.+..+..
T Consensus        83 ~v~~Ll~~Gad~~~~d~~  100 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPD  100 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSS
T ss_pred             hhhhhhcccccceeeCCC
Confidence            999999999987766553

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=6.2e-20  Score=154.60  Aligned_cols=97  Identities=18%  Similarity=0.118  Sum_probs=91.5

Q ss_pred             CCCcccchHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021           10 DFDMQVIGNFLSFASR---GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus        10 ~~d~~g~t~l~~a~~~---g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ..+..|+||||+|+..   |+.++++.|+++|+|+|.+|.+|+||||+||..|+.+++++|+++|++++.+|..|.||||
T Consensus        40 ~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~  119 (154)
T d1dcqa1          40 NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLD  119 (154)
T ss_dssp             SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             cCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccccccccccccccccccCccccccCCCCCCHHH
Confidence            3477899999999984   6789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhcccCc
Q 039021           87 DARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~~g~~  106 (464)
                      +|+..|+.+++++|++.++.
T Consensus       120 ~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1         120 IAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHHHTTCHHHHHHHHHHHTT
T ss_pred             HHHHcCCHHHHHHHHHhCCC
Confidence            99999999999999987764

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.3e-20  Score=150.75  Aligned_cols=95  Identities=27%  Similarity=0.386  Sum_probs=91.1

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI   96 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i   96 (464)
                      +.|+.||..|+.++++.|+++|+|+|.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCcccccc
Q 039021           97 CRILEVNGGKDFIHD  111 (464)
Q Consensus        97 v~~L~~~g~~~~~~~  111 (464)
                      +++|+++|++.+..+
T Consensus        83 v~~Ll~~ga~v~~~~   97 (130)
T d1ycsb1          83 CKFLVESGAAVFAMT   97 (130)
T ss_dssp             HHHHHHTTCCTTCCC
T ss_pred             HHHHHHcCCCccccc
Confidence            999999999876544

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.6e-19  Score=143.42  Aligned_cols=102  Identities=17%  Similarity=0.076  Sum_probs=92.5

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccC-CC
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR-WQ   81 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g   81 (464)
                      .-+++.+..|.+|.||||+|+..|+.++++.|++.|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.++. .|
T Consensus        22 ~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v~~~~~~~~  101 (130)
T d1ycsb1          22 YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM  101 (130)
T ss_dssp             STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred             HcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHHHHHHHHcCCCcccccCCCC
Confidence            35677899999999999999999999999999999999999999999999999999999999999999999998775 58


Q ss_pred             CCHHHHH--HhcCchHHHHHHhccc
Q 039021           82 RTPLTDA--RLYGHRDICRILEVNG  104 (464)
Q Consensus        82 ~tpl~~A--~~~g~~~iv~~L~~~g  104 (464)
                      .||++++  ...|+.+++++|+..+
T Consensus       102 ~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1         102 QTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             CCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcChHHHHHHHHhHH
Confidence            8887665  5678999999998654

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.5e-19  Score=143.15  Aligned_cols=92  Identities=26%  Similarity=0.313  Sum_probs=45.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC-CHHHHHHhcCchH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR-TPLTDARLYGHRD   95 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-tpl~~A~~~g~~~   95 (464)
                      ++||+||..|++++++.|+++|+|+|.+|..|+||||.|+ .|+.+++++|+++|++++.+|..+. ||||+|+..|+.+
T Consensus         5 ~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~   83 (125)
T d1bi7b_           5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD   83 (125)
T ss_dssp             THHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence            4455555555555555555555555555555555554332 3455555555555555555444443 3555555555555


Q ss_pred             HHHHHhcccCcccc
Q 039021           96 ICRILEVNGGKDFI  109 (464)
Q Consensus        96 iv~~L~~~g~~~~~  109 (464)
                      ++++|+++|++.+.
T Consensus        84 ~v~~Ll~~ga~~~~   97 (125)
T d1bi7b_          84 TLVVLHRAGARLDV   97 (125)
T ss_dssp             HHHHHHHHTCCSSC
T ss_pred             cccccccccccccc
Confidence            55555555544433

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=1.7e-19  Score=144.99  Aligned_cols=87  Identities=24%  Similarity=0.137  Sum_probs=83.1

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .-|++.+..|.+|.||||+|+..|+.++++.|+++|+|+|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        23 ~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~v~~Ll~~Gad~~~~d~~G~  102 (118)
T d1myoa_          23 AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGL  102 (118)
T ss_dssp             TTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHHHHHHHTTCCCSSSSSSSTC
T ss_pred             HhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchhhhhhhhcccccceeeCCCCC
Confidence            34677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHH
Q 039021           83 TPLTDAR   89 (464)
Q Consensus        83 tpl~~A~   89 (464)
                      ||||+|.
T Consensus       103 t~l~~a~  109 (118)
T d1myoa_         103 TALEATD  109 (118)
T ss_dssp             CCCCTCS
T ss_pred             CHHHHHh
Confidence            9999884

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=1.8e-17  Score=151.47  Aligned_cols=101  Identities=24%  Similarity=0.201  Sum_probs=94.6

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNV-QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~-~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      ...+..|.+|.||||+|+..|+.++++.|++.|++.+. ++..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus       149 ~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~  228 (255)
T d1oy3d_         149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP  228 (255)
T ss_dssp             GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             cccccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCH
Confidence            34466788999999999999999999999999999875 46789999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCc
Q 039021           85 LTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      ||+|+..++.+++++|+++||.
T Consensus       229 L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         229 LGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHTSSCHHHHHHHHHTTCC
T ss_pred             HHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999995

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.9e-18  Score=136.96  Aligned_cols=98  Identities=27%  Similarity=0.348  Sum_probs=91.8

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-hHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKR-TALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~-t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      -|++.+..|.+|.|+||.|+ .|+.++++.|+++|+++|.+|..|. ||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus        25 ~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~  103 (125)
T d1bi7b_          25 AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR  103 (125)
T ss_dssp             TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCC
T ss_pred             cCCccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCC
Confidence            46778899999999999765 6999999999999999999999876 699999999999999999999999999999999


Q ss_pred             CHHHHHHhcCchHHHHHHhc
Q 039021           83 TPLTDARLYGHRDICRILEV  102 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~  102 (464)
                      ||||+|+..|+.+++++|+.
T Consensus       104 T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_         104 LPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             CHHHHHHHHTCHHHHHHHSS
T ss_pred             CHHHHHHHcCCHHHHHHHHh
Confidence            99999999999999999975

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.7e-17  Score=145.37  Aligned_cols=108  Identities=25%  Similarity=0.318  Sum_probs=102.6

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..|.+|.||||+|+..|+.++++.|+++|+|++.+|..|.||||+|+..++.+++++|+..|++++.+|..|.||
T Consensus        93 ~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~Tp  172 (223)
T d1uoha_          93 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTP  172 (223)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred             CceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCCCCce
Confidence            45678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++.+..+.
T Consensus       173 L~~Aa~~g~~~~v~~LL~~Gad~~~~d~  200 (223)
T d1uoha_         173 LHLACDEERVEEAKLLVSQGASIYIENK  200 (223)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred             eccccccCcHHHHHHHHHCCCCCCCCCC
Confidence            9999999999999999999998776654

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=3.9e-17  Score=149.20  Aligned_cols=97  Identities=23%  Similarity=0.082  Sum_probs=91.9

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTS---PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~---~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      +-+|++|.||||+||..|+.++++.||++|++   +|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus         3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL   82 (255)
T d1oy3d_           3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL   82 (255)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhh
Confidence            45789999999999999999999999999988   778889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHhcccC
Q 039021           86 TDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~  105 (464)
                      |+|+..++.++++.++..+.
T Consensus        83 ~~A~~~~~~~~~~~Ll~~~~  102 (255)
T d1oy3d_          83 HLACRVRAHTCACVLLQPRP  102 (255)
T ss_dssp             HHHTTTTCHHHHHHHSSSCC
T ss_pred             hhhhccCchHHHHHHHhhcc
Confidence            99999999999999987665

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.67  E-value=1.4e-16  Score=140.87  Aligned_cols=95  Identities=28%  Similarity=0.253  Sum_probs=91.0

Q ss_pred             cCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHH
Q 039021            6 AASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL   85 (464)
Q Consensus         6 ~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl   85 (464)
                      ++.+..|..|.|+|++|+..|...+++.++..++++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|.|||
T Consensus       114 ~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl  193 (209)
T d1ot8a_         114 ADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPR  193 (209)
T ss_dssp             CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             ccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence            44567788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHH
Q 039021           86 TDARLYGHRDICRIL  100 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L  100 (464)
                      |+|+..|+.+++++|
T Consensus       194 ~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         194 DVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHHTTCHHHHHHH
T ss_pred             HHHHHcCCHHHHhhc
Confidence            999999999999986

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.8e-16  Score=133.62  Aligned_cols=106  Identities=22%  Similarity=0.267  Sum_probs=82.9

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      .+++.+..|..|.||||+|+. |+.++++.||+.|+++|.++..|++|++.|+..++.+++++++++|++++.+|..|.|
T Consensus        25 ~~~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t  103 (156)
T d1bd8a_          25 ELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL  103 (156)
T ss_dssp             TCCCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             CCCCCCccCCCCCcccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCe
Confidence            456677778888888887764 7778888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHhcCchHHHHHHhcccCcccccc
Q 039021           84 PLTDARLYGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      |||+|+..|+.+++++|+ .|++.+..+
T Consensus       104 ~L~~A~~~~~~~i~~~L~-~~~~~~~~d  130 (156)
T d1bd8a_         104 PIHLAVQEGHTAVVSFLA-AESDLHRRD  130 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHH-TTSCTTCCC
T ss_pred             eecccccccccccccccc-ccccccccC
Confidence            888888888888888776 455544443

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.3e-16  Score=140.28  Aligned_cols=98  Identities=24%  Similarity=0.270  Sum_probs=92.4

Q ss_pred             CccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCC
Q 039021            4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT   83 (464)
Q Consensus         4 ~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t   83 (464)
                      -+++.+..|.+|.||||+|+..++.++++.|+..|+++|.+|.+|+||||+|+..|+.++|++|+++|++++.+|..|+|
T Consensus       125 ~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~t  204 (223)
T d1uoha_         125 GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKT  204 (223)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             CCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence            35667888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHhc
Q 039021           84 PLTDARLYGHRDICRILEV  102 (464)
Q Consensus        84 pl~~A~~~g~~~iv~~L~~  102 (464)
                      |||+|. .|+.+++++|++
T Consensus       205 pl~~A~-~~~~~i~~~Ll~  222 (223)
T d1uoha_         205 PLQVAK-GGLGLILKRMVE  222 (223)
T ss_dssp             HHHHCC-TTHHHHHHHHHC
T ss_pred             HHHHHH-CCCHHHHhcccC
Confidence            999984 699999999874

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.9e-16  Score=153.30  Aligned_cols=92  Identities=32%  Similarity=0.457  Sum_probs=88.5

Q ss_pred             chHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchH
Q 039021           16 IGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRD   95 (464)
Q Consensus        16 ~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~   95 (464)
                      .||||.||..|+.++|+.|+++|+++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCcc
Q 039021           96 ICRILEVNGGKD  107 (464)
Q Consensus        96 iv~~L~~~g~~~  107 (464)
                      ++++|+..+.+.
T Consensus        81 ~~~~Ll~~~~~~   92 (408)
T d1n11a_          81 MVKLLLENNANP   92 (408)
T ss_dssp             HHHHHHHHTCCT
T ss_pred             HHHHHHHhhhcc
Confidence            999999877644

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.63  E-value=1.3e-16  Score=147.27  Aligned_cols=93  Identities=17%  Similarity=0.158  Sum_probs=86.3

Q ss_pred             cccchHHHHHHHcCCHHHHHHH--------HHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021           13 MQVIGNFLSFASRGDRVGLNQM--------LREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus        13 ~~g~t~l~~a~~~g~~~~~~~l--------l~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      .+|+||||+||..|+.++++.|        ++.|||||.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus        31 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~  110 (277)
T d2fo1e1          31 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA  110 (277)
T ss_dssp             SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeecccccccccccccccccccccccccccccccc
Confidence            4699999999999999988776        56799999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcccC
Q 039021           85 LTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~  105 (464)
                      +++|...++.++...+...+.
T Consensus       111 l~~a~~~~~~~~~~~l~~~~~  131 (277)
T d2fo1e1         111 LHQAAANRDFGMMVYMLNSTK  131 (277)
T ss_dssp             HHHHHHTTCHHHHHHHTTSHH
T ss_pred             ccchhhhcchhhhhhhhhccc
Confidence            999999999999998875543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.63  E-value=9.4e-17  Score=140.32  Aligned_cols=146  Identities=14%  Similarity=-0.002  Sum_probs=99.6

Q ss_pred             ccccccccceeeeeEEeEE-eCceEEEEEeeccCCc---------------hHHHHHhHHHH-HHHHhcCCCceeeeece
Q 039021          135 LHSSMVEQGVFGESQTAKW-RGTWVVKTVIKSHIYH---------------PVKMVLSAKDN-CKLRELRHPNILQFLGS  197 (464)
Q Consensus       135 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------~~~~~~~~~~e-~~l~~l~hpnIv~~~~~  197 (464)
                      .+++.||+|+||+||+|++ +|+.||||+++.....               ..........| ..+.++.|+++++.+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            4678999999999999997 5899999997642211               01122334567 88999999999998865


Q ss_pred             eeeCCceEEEEEecCCCChHHHHhhccCCCHHHHHHHHHHHHh------------------hhcccCCCceeEecchhhh
Q 039021          198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIAR------------------NLLQDEGDHLKIGEYWVQM  259 (464)
Q Consensus       198 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~------------------Nill~~~~~~kl~DFG~a~  259 (464)
                      .    ..+++|||++++.+.       .++...+..++.|+++                  |||+++++ ++|+|||+|+
T Consensus        83 ~----~~~lvme~~~~~~~~-------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a~  150 (191)
T d1zara2          83 E----GNAVLMELIDAKELY-------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSV  150 (191)
T ss_dssp             E----TTEEEEECCCCEEGG-------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCTTCE
T ss_pred             c----CCEEEEEeecccccc-------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-EEEEECCCcc
Confidence            3    237999999986543       2445555667777765                  99998655 8999999987


Q ss_pred             hhcccCCCCcCCCCcccc------cccccCCCCCcccchhHHHHH
Q 039021          260 FYEQIHPNQENSQRNDNS------SIASNVLDDTKKDICSFGYIF  298 (464)
Q Consensus       260 ~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~~DvwSlGv~l  298 (464)
                      .......     ..|...      +. -.+.|+.++|+||..--+
T Consensus       151 ~~~~~~~-----~~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         151 EVGEEGW-----REILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ETTSTTH-----HHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             cCCCCCc-----HHHHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence            6542211     111111      11 136678999999986443

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=7.9e-16  Score=144.41  Aligned_cols=102  Identities=19%  Similarity=0.159  Sum_probs=86.7

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCH-------HHHHHhhc--------------
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHA-------PIVELLLQ--------------   69 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~-------~~v~~Ll~--------------   69 (464)
                      .|.+|+||||+||..|+.++|+.||++|+|++.+|..|+||||.||..++.       +++++|..              
T Consensus       103 ~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~lh  182 (301)
T d1sw6a_         103 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH  182 (301)
T ss_dssp             CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCHHH
Confidence            489999999999999999999999999999999999999999999986642       33333321              


Q ss_pred             ----------------------------cCC-------------------------------------CcccccCCCCCH
Q 039021           70 ----------------------------YKA-------------------------------------NLNLKDRWQRTP   84 (464)
Q Consensus        70 ----------------------------~ga-------------------------------------~~~~~d~~g~tp   84 (464)
                                                  .+.                                     .+|.+|..|+||
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~Tp  262 (301)
T d1sw6a_         183 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC  262 (301)
T ss_dssp             HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred             HHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCH
Confidence                                        111                                     157889999999


Q ss_pred             HHHHHhcCchHHHHHHhcccCccccccC
Q 039021           85 LTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      ||+|+..|+.+++++|+++|++++..+.
T Consensus       263 Lh~A~~~g~~~iv~~Ll~~GAd~~~~n~  290 (301)
T d1sw6a_         263 LNIAARLGNISIVDALLDYGADPFIANK  290 (301)
T ss_dssp             HHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence            9999999999999999999998877765

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.61  E-value=6.6e-17  Score=154.91  Aligned_cols=97  Identities=16%  Similarity=0.095  Sum_probs=84.4

Q ss_pred             CCcccchHHHHHHHcCCHHHHHH---HHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccC--CCCCHH
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQ---MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR--WQRTPL   85 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~---ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~--~g~tpl   85 (464)
                      .|..|.|+||+||.+|+.++++.   |+..|+++|.+|.+|+||||+||..||.++|++|+++|++++..+.  .|.|||
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L  165 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF  165 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHH
T ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChh
Confidence            36689999999999999877765   7888999999999999999999999999999999999999988764  589999


Q ss_pred             HHHHhcCchHHHHHHhcccCcc
Q 039021           86 TDARLYGHRDICRILEVNGGKD  107 (464)
Q Consensus        86 ~~A~~~g~~~iv~~L~~~g~~~  107 (464)
                      |+|+..|+.+++++|++.|+..
T Consensus       166 ~~Aa~~g~~~iv~~Ll~~~~~~  187 (346)
T d2ajaa1         166 RLAAENGHLHVLNRLCELAPTE  187 (346)
T ss_dssp             HHHHHTTCHHHHHHHHHSCGGG
T ss_pred             HHHHHHhhHHHHHHHHHcCCcc
Confidence            9999999999999999988754

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=8e-16  Score=150.09  Aligned_cols=96  Identities=23%  Similarity=0.193  Sum_probs=82.5

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..+..+.||||.|+..++.+.++.+++.|+++|.+|.+|.||||+|+..|+.++|++|+++||++|.+|..|.||
T Consensus       287 g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~  366 (408)
T d1n11a_         287 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTP  366 (408)
T ss_dssp             TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCH
T ss_pred             CCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence            45566777778888888888888888888888888888888889999999999999999999999999999888899999


Q ss_pred             HHHHHhcCchHHHHHH
Q 039021           85 LTDARLYGHRDICRIL  100 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L  100 (464)
                      ||+|+..|+.+++++|
T Consensus       367 L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         367 LAIAKRLGYISVTDVL  382 (408)
T ss_dssp             HHHHHHTTCHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHH
Confidence            9999988888888765

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.2e-15  Score=128.54  Aligned_cols=98  Identities=28%  Similarity=0.319  Sum_probs=88.4

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCH
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTP   84 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp   84 (464)
                      +++.+..+..|.+|++.|+..++.++++.++++|+++|.+|..|+||||+||..|+.+++++|+ .|++++.+|..|.||
T Consensus        58 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~Tp  136 (156)
T d1bd8a_          58 GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTP  136 (156)
T ss_dssp             TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCH
Confidence            4456677888999999999999999999999999999999999999999999999999999887 689999999999999


Q ss_pred             HHHHHhcCchHHHHHHhcc
Q 039021           85 LTDARLYGHRDICRILEVN  103 (464)
Q Consensus        85 l~~A~~~g~~~iv~~L~~~  103 (464)
                      ||+|+..|+.+++++|++|
T Consensus       137 L~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         137 LELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHcCCHHHHHHHHhh
Confidence            9999999999999999876

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=2.9e-15  Score=125.39  Aligned_cols=92  Identities=27%  Similarity=0.349  Sum_probs=71.5

Q ss_pred             CCCCcccchHHHHHHHcCCHH---------------------------------HHHHHHHcCCCCCCcCCCCChHhHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRV---------------------------------GLNQMLREGTSPNVQDYDKRTALHLA   55 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~---------------------------------~~~~ll~~ga~~n~~d~~g~t~lh~A   55 (464)
                      ...|..|.||||+|+..++.+                                 .++.++..|++++.+|.+|+||||+|
T Consensus        28 ~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A  107 (153)
T d1awcb_          28 FTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWA  107 (153)
T ss_dssp             CCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred             cccccCCCccccccccccccccccccccccccccccccccccccccccccccceeeecccccCCccccccccCchHHHhh
Confidence            335777777877777776666                                 45556667778888888888888888


Q ss_pred             HHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHH
Q 039021           56 ASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL  100 (464)
Q Consensus        56 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L  100 (464)
                      +..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus       108 ~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         108 TEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             hhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            888888888888888888888888888888888888888888766

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=9.8e-16  Score=137.34  Aligned_cols=104  Identities=24%  Similarity=0.230  Sum_probs=72.4

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccC-CCcccccCCCCCHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYK-ANLNLKDRWQRTPLTD   87 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~   87 (464)
                      ...+..+.|+++.++..++.++++.|+..|.+.+.+|..|+||||+|+..|+.+++++|+.+| .+++.+|..|.||||+
T Consensus        99 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~  178 (229)
T d1ixva_          99 NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH  178 (229)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHH
T ss_pred             cccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhh
Confidence            345556677777777777777777777777777777777777777777777777777777665 5567777777777777


Q ss_pred             HHhcCchHHHHHHhc-ccCccccccC
Q 039021           88 ARLYGHRDICRILEV-NGGKDFIHDQ  112 (464)
Q Consensus        88 A~~~g~~~iv~~L~~-~g~~~~~~~~  112 (464)
                      |+..|+.+++++|++ .|++.+..+.
T Consensus       179 A~~~~~~~~v~~Ll~~~gad~~~~d~  204 (229)
T d1ixva_         179 ALAEGHGDAAVLLVEKYGAEYDLVDN  204 (229)
T ss_dssp             HHHTTCHHHHHHHHHHHCCCSCCCCT
T ss_pred             hcccccHHHHHHHHHhcCCCCCCcCC
Confidence            777777777777764 4666555543

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.3e-15  Score=128.01  Aligned_cols=92  Identities=32%  Similarity=0.275  Sum_probs=80.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI   96 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i   96 (464)
                      ++||+||..|+.++|+.|+++|+|+|.+|.+|+||||+|+ .|+.+++++|+++|++++.++..|.+|++.++..+...+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            7899999999999999999999999999999999998775 688999999999999999899999999999999999999


Q ss_pred             HHHHhcccCcccc
Q 039021           97 CRILEVNGGKDFI  109 (464)
Q Consensus        97 v~~L~~~g~~~~~  109 (464)
                      +..++..+.....
T Consensus        82 ~~~l~~~~~~~~~   94 (156)
T d1ihba_          82 LQTLLEFQADVNI   94 (156)
T ss_dssp             HHHHHHTTCCTTC
T ss_pred             ccccccccccccc
Confidence            8888877765443

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.58  E-value=8.4e-17  Score=154.17  Aligned_cols=107  Identities=15%  Similarity=0.044  Sum_probs=91.4

Q ss_pred             CCCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--CCChHhHHHHHcCCHHHHHHhhccCCCcc---c
Q 039021            2 EGDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDY--DKRTALHLAASEGHAPIVELLLQYKANLN---L   76 (464)
Q Consensus         2 ~~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~--~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~---~   76 (464)
                      ...++..+..|.+|.||||+||..|+.++|+.|++.|++++..+.  +|+||||+||..||.++|++|++.|++..   .
T Consensus       113 ~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~  192 (346)
T d2ajaa1         113 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMI  192 (346)
T ss_dssp             --CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHH
T ss_pred             HhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCccccccc
Confidence            345677888999999999999999999999999999999998764  59999999999999999999999998753   3


Q ss_pred             ccCCCCCHHHHHHhcCchHHHHHHhcccCccc
Q 039021           77 KDRWQRTPLTDARLYGHRDICRILEVNGGKDF  108 (464)
Q Consensus        77 ~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~  108 (464)
                      .+..|.||++.|+..|+.+++++|+++|++..
T Consensus       193 ~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~  224 (346)
T d2ajaa1         193 QAENYYAFRWAAVGRGHHNVINFLLDCPVMLA  224 (346)
T ss_dssp             HHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHH
T ss_pred             ccCCCcchhhHHhhcCHHHHHHHHHhCCCCcc
Confidence            44566788888999999999999999988653

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.56  E-value=8.9e-16  Score=142.90  Aligned_cols=92  Identities=22%  Similarity=0.209  Sum_probs=84.2

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      ....+..|.||||+|+..|+.++++.|++.|+|+|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+
T Consensus       192 ~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~  271 (291)
T d1s70b_         192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV  271 (291)
T ss_dssp             CCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred             cccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence            35567789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHhcc
Q 039021           88 ARLYGHRDICRILEVN  103 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~  103 (464)
                      |+.    +++++|.+.
T Consensus       272 A~e----~~~~~L~~~  283 (291)
T d1s70b_         272 ADE----DILGYLEEL  283 (291)
T ss_dssp             CCS----GGGHHHHHH
T ss_pred             HHH----HHHHHHHHH
Confidence            975    566666543

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=9.6e-15  Score=122.31  Aligned_cols=96  Identities=23%  Similarity=0.224  Sum_probs=86.8

Q ss_pred             hHHHHHHHcCCHHHHHHHHHcCCCCCCc------CCCCChHhHHHHHc---CCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021           17 GNFLSFASRGDRVGLNQMLREGTSPNVQ------DYDKRTALHLAASE---GHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus        17 t~l~~a~~~g~~~~~~~ll~~ga~~n~~------d~~g~t~lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      ..|+.|+..+++..+..++..|+|++.+      +..|+||||+|+..   ++.+++++|+++|+++|.+|..|.||||+
T Consensus         8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~   87 (154)
T d1dcqa1           8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcccccc
Confidence            4466788999999999999999998766      77899999999974   67899999999999999999999999999


Q ss_pred             HHhcCchHHHHHHhcccCccccccC
Q 039021           88 ARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      |+..|+.+++++|+++|++.+..+.
T Consensus        88 A~~~~~~~~v~~Ll~~gad~~~~d~  112 (154)
T d1dcqa1          88 CCLTDNAECLKLLLRGKASIEIANE  112 (154)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             ccccccccccccccccCccccccCC
Confidence            9999999999999999998776654

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.6e-15  Score=131.83  Aligned_cols=110  Identities=22%  Similarity=0.177  Sum_probs=91.4

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhh--------------
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLL--------------   68 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll--------------   68 (464)
                      .+++..+..|.+|+||||+|+..|+.++++.|++.|+|++.+|..|+||||.|+..++.++++.|+              
T Consensus        27 ~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  106 (221)
T d1iknd_          27 GDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA  106 (221)
T ss_dssp             --CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC
T ss_pred             hCCCCcccCCCCCCccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence            456778889999999999999999999999999999999999999999988888777766665554              


Q ss_pred             -------------------------ccCCCccccc-CCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           69 -------------------------QYKANLNLKD-RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        69 -------------------------~~ga~~~~~d-~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                                               ..|+.++.++ ..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus       107 ~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~  176 (221)
T d1iknd_         107 TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY  176 (221)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCT
T ss_pred             cccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCC
Confidence                                     4555555443 5689999999999999999999999998776654

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=8.1e-15  Score=135.61  Aligned_cols=106  Identities=21%  Similarity=0.147  Sum_probs=85.2

Q ss_pred             CCCCCCcccchHHHHHHHc----CCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhc-cCCCcccccCCC
Q 039021            7 ASGDFDMQVIGNFLSFASR----GDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQ-YKANLNLKDRWQ   81 (464)
Q Consensus         7 ~~~~~d~~g~t~l~~a~~~----g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g   81 (464)
                      +.+..|..|.++++.+...    +..++++.|+++|+++|.+|..|.||||.|+..|+.+++++|++ .|++++.+|..|
T Consensus       174 ~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G  253 (285)
T d1wdya_         174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG  253 (285)
T ss_dssp             CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTS
T ss_pred             CcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCC
Confidence            3344444454444443322    12345566677788888889999999999999999999999997 599999999999


Q ss_pred             CCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           82 RTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        82 ~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                      .||||+|+..|+.+++++|+++|++++.+|.
T Consensus       254 ~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         254 KTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            9999999999999999999999999887764

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.54  E-value=7.9e-15  Score=136.35  Aligned_cols=101  Identities=28%  Similarity=0.312  Sum_probs=93.8

Q ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHh
Q 039021           11 FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL   90 (464)
Q Consensus        11 ~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~   90 (464)
                      .+.+|.|+|++||..|++++|+.||++|+|+|.+|.+|+||||+|+..|+.+++++|+++|++.+..+..+.+||+.|+.
T Consensus        36 ~~~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~  115 (291)
T d1s70b_          36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS  115 (291)
T ss_dssp             CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccccccccccccccccccc
Confidence            34567799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHhcccCcccccc
Q 039021           91 YGHRDICRILEVNGGKDFIHD  111 (464)
Q Consensus        91 ~g~~~iv~~L~~~g~~~~~~~  111 (464)
                      .++.++++.++.+|......+
T Consensus       116 ~~~~~~~~~l~~~~~~~~~~~  136 (291)
T d1s70b_         116 CGYLDIAEYLISQGAHVGAVN  136 (291)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCC
T ss_pred             ccccchhhcccccCccccccc
Confidence            999999999999887654433

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.53  E-value=1.2e-14  Score=133.89  Aligned_cols=95  Identities=22%  Similarity=0.234  Sum_probs=88.5

Q ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHH
Q 039021            8 SGDFDMQVIGNFLSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLT   86 (464)
Q Consensus         8 ~~~~d~~g~t~l~~a~~~g~~~~~~~ll-~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~   86 (464)
                      ....+..|.|+||+++..++.+.++.++ ..|.+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||
T Consensus       180 ~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~  259 (277)
T d2fo1e1         180 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQ  259 (277)
T ss_dssp             TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHH
T ss_pred             ccccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHH
Confidence            3456778999999999999999999765 568999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHhc
Q 039021           87 DARLYGHRDICRILEV  102 (464)
Q Consensus        87 ~A~~~g~~~iv~~L~~  102 (464)
                      +|+..|+.+++++|.+
T Consensus       260 ~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         260 LAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHTTCHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHH
Confidence            9999999999999974

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.2e-14  Score=126.70  Aligned_cols=93  Identities=18%  Similarity=0.125  Sum_probs=86.1

Q ss_pred             cccchHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021           13 MQVIGNFLSFASRGDRVGLNQMLR----EGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus        13 ~~g~t~l~~a~~~g~~~~~~~ll~----~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      ++|+||||+||..|+.++++.|+.    .|+++|.+|..|+||||+|+..|+.+++++|+++|++.+..+..|.++++.|
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            479999999999999999998874    7999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHhcccC
Q 039021           89 RLYGHRDICRILEVNGG  105 (464)
Q Consensus        89 ~~~g~~~iv~~L~~~g~  105 (464)
                      ...++.++++.......
T Consensus        81 ~~~~~~~~~~~~~~~~~   97 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAA   97 (228)
T ss_dssp             HHTTCHHHHHHHHHHSC
T ss_pred             cccccccchhhhhhccc
Confidence            99999998887765443

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.7e-14  Score=128.59  Aligned_cols=98  Identities=20%  Similarity=0.107  Sum_probs=89.9

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTD   87 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d-~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   87 (464)
                      ......|.||||.|+..++.+.++.|+..|++++.++ .+|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+
T Consensus       105 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~  184 (221)
T d1iknd_         105 KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL  184 (221)
T ss_dssp             GCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGG
T ss_pred             cccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHH
Confidence            4455668899999999999999999999999988765 579999999999999999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHhcccCc
Q 039021           88 ARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        88 A~~~g~~~iv~~L~~~g~~  106 (464)
                      |+..++.+++++|.+...+
T Consensus       185 A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         185 TWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             CTTSSCHHHHHHHHTTSCG
T ss_pred             HHHCCCHHHHHHHHHcCCc
Confidence            9999999999999987653

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.4e-14  Score=117.87  Aligned_cols=102  Identities=20%  Similarity=0.253  Sum_probs=94.5

Q ss_pred             CCccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCC
Q 039021            3 GDAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR   82 (464)
Q Consensus         3 ~~~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~   82 (464)
                      .-|++.+..|.+|.||||+|+ .|+.++++.|+++|++++.++..|.++|+.++..++..++++|+..+.+++..|..|.
T Consensus        22 ~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  100 (156)
T d1ihba_          22 QNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGN  100 (156)
T ss_dssp             TSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             HCCCCcCccCCcccccccccc-cccccccccccccccccccccccCcccccccccccccccccccccccccccccccccc
Confidence            356778899999999999876 7899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCchHHHHHHhcccC
Q 039021           83 TPLTDARLYGHRDICRILEVNGG  105 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~  105 (464)
                      +|+|+|+..+..+++++|+.+++
T Consensus       101 ~~l~~a~~~~~~~~~~~Ll~~~~  123 (156)
T d1ihba_         101 LPLHLAAKEGHLRVVEFLVKHTA  123 (156)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHSC
T ss_pred             ccccccccccccccccccccccc
Confidence            99999999999999999998886

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.7e-14  Score=125.22  Aligned_cols=90  Identities=27%  Similarity=0.271  Sum_probs=84.8

Q ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHH
Q 039021            9 GDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDA   88 (464)
Q Consensus         9 ~~~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   88 (464)
                      ...+..|.++|+.|+..+...+++.+++.|.+++.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|
T Consensus       138 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A  217 (228)
T d1k1aa_         138 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA  217 (228)
T ss_dssp             CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTC
T ss_pred             cccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            45566799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCchHHHH
Q 039021           89 RLYGHRDICR   98 (464)
Q Consensus        89 ~~~g~~~iv~   98 (464)
                      +..|+.++++
T Consensus       218 ~~~~~~divk  227 (228)
T d1k1aa_         218 RSRRVIDILR  227 (228)
T ss_dssp             SSHHHHHHHT
T ss_pred             HhCCCccccC
Confidence            9999988874

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=3.3e-13  Score=112.54  Aligned_cols=97  Identities=28%  Similarity=0.355  Sum_probs=87.0

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCChHhHHHHHcCCHH--------------------------------
Q 039021           15 VIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAP--------------------------------   62 (464)
Q Consensus        15 g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~~g~t~lh~A~~~g~~~--------------------------------   62 (464)
                      ..||||.||..|+.++++.||++|++++ .|..|+||||+|+..++.+                                
T Consensus         2 ~~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T d1awcb_           2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4599999999999999999999999988 6999999999988887755                                


Q ss_pred             -HHHHhhccCCCcccccCCCCCHHHHHHhcCchHHHHHHhcccCccccccC
Q 039021           63 -IVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQ  112 (464)
Q Consensus        63 -~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv~~L~~~g~~~~~~~~  112 (464)
                       ++++|+.+|++++.+|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~  131 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK  131 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             eeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCC
Confidence             46677778999999999999999999999999999999999998776655

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.43  E-value=2e-13  Score=120.04  Aligned_cols=107  Identities=27%  Similarity=0.234  Sum_probs=92.2

Q ss_pred             cCCCC-CCcccchHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------------------------------------
Q 039021            6 AASGD-FDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDY--------------------------------------   46 (464)
Q Consensus         6 ~~~~~-~d~~g~t~l~~a~~~g~~~~~~~ll~~ga~~n~~d~--------------------------------------   46 (464)
                      ++.+. .|.+|.||||+||..|+.++++.|+..|+++|.++.                                      
T Consensus        13 ~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (209)
T d1ot8a_          13 AELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTT   92 (209)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCC
T ss_pred             CCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34443 588999999999999999999999988888776554                                      


Q ss_pred             -----------------------------CCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHHhcCchHHH
Q 039021           47 -----------------------------DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC   97 (464)
Q Consensus        47 -----------------------------~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~iv   97 (464)
                                                   .|+||||.|+..+..++++.|+.++++++.+|..|.||||+|+..|+.+++
T Consensus        93 ~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v  172 (209)
T d1ot8a_          93 PLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS  172 (209)
T ss_dssp             HHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             cccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHH
Confidence                                         356667889999999999999999999999999999999999999999999


Q ss_pred             HHHhcccCccccccC
Q 039021           98 RILEVNGGKDFIHDQ  112 (464)
Q Consensus        98 ~~L~~~g~~~~~~~~  112 (464)
                      ++|+++|++.+..+.
T Consensus       173 ~~Ll~~gad~n~~d~  187 (209)
T d1ot8a_         173 KALLDNFANREITDH  187 (209)
T ss_dssp             HHHHHTTCCTTCCCT
T ss_pred             HHHHHCCCCCCCcCC
Confidence            999999998766554

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=5.8e-13  Score=118.82  Aligned_cols=99  Identities=23%  Similarity=0.134  Sum_probs=90.8

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCChHhHHHHHcCCHHHHHHhhc-cCCCcccccCCCC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQ-YKANLNLKDRWQR   82 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~g-a~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~   82 (464)
                      +......|.+|.||||+|+..|+.++++.|++.| .++|.+|.+|+||||+|+..|+.++|++|++ .|++++.+|..|.
T Consensus       128 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~  207 (229)
T d1ixva_         128 GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA  207 (229)
T ss_dssp             TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSC
T ss_pred             cccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCC
Confidence            4456677899999999999999999999999986 6799999999999999999999999999997 5999999999999


Q ss_pred             CHHHHHHhcCchHHHHHHhcccCc
Q 039021           83 TPLTDARLYGHRDICRILEVNGGK  106 (464)
Q Consensus        83 tpl~~A~~~g~~~iv~~L~~~g~~  106 (464)
                      ||||+|+   ..+++++|+++|++
T Consensus       208 t~l~~A~---~~~~~~~Ll~~g~d  228 (229)
T d1ixva_         208 KAEDVAL---NEQVKKFFLNNVVD  228 (229)
T ss_dssp             CTGGGCS---CHHHHHHHHHHCCC
T ss_pred             CHHHHHh---hHHHHHHHHHcCCC
Confidence            9999987   35799999999985

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3.7e-13  Score=124.19  Aligned_cols=75  Identities=21%  Similarity=0.105  Sum_probs=70.6

Q ss_pred             ccCCCCCCcccchHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccC
Q 039021            5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR   79 (464)
Q Consensus         5 ~~~~~~~d~~g~t~l~~a~~~g~~~~~~~ll~~-ga~~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~   79 (464)
                      +++.+..|..|.||||+|+..|+.++++.||+. |+|+|.+|.+|.||||+|+..|+.+++++|+++||++|++|.
T Consensus       209 ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            556677899999999999999999999999985 999999999999999999999999999999999999999884

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.28  E-value=1.4e-12  Score=121.71  Aligned_cols=49  Identities=31%  Similarity=0.390  Sum_probs=47.6

Q ss_pred             CCCcCCCCChHhHHHHHcCCHHHHHHhhccCCCcccccCCCCCHHHHHH
Q 039021           41 PNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR   89 (464)
Q Consensus        41 ~n~~d~~g~t~lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~   89 (464)
                      +|.+|.+|+||||+|+..|+.++|++|+++||+++.+|..|.|||++|+
T Consensus       252 in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         252 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             ccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            7899999999999999999999999999999999999999999999986

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.19  E-value=0.00036  Score=61.73  Aligned_cols=84  Identities=6%  Similarity=-0.218  Sum_probs=57.2

Q ss_pred             cccccccccceeeeeEEeEEeCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC-CCceeeeeceeeeCCceEEEEEec
Q 039021          134 TLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR-HPNILQFLGSIVLGEEMILITEYL  211 (464)
Q Consensus       134 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~  211 (464)
                      |+..+..+.++.+.||+....+..+++|+.......   ....+..| ..++.+. +--+.+++.++.+++..++|||++
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l   92 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             eEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEec
Confidence            344444444445689998877888888887753211   22345667 7777663 333677888888888899999999


Q ss_pred             CCCChHHHH
Q 039021          212 PKGNLKGIL  220 (464)
Q Consensus       212 ~~g~L~~~l  220 (464)
                      +|.++.+..
T Consensus        93 ~G~~~~~~~  101 (263)
T d1j7la_          93 DGVLCSEEY  101 (263)
T ss_dssp             SSEEHHHHT
T ss_pred             ccccccccc
Confidence            998876554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.76  E-value=0.0065  Score=52.86  Aligned_cols=73  Identities=12%  Similarity=0.004  Sum_probs=49.5

Q ss_pred             cccccee-eeeEEeEEe-CceEEEEEeeccCCchHHHHHhHHHH-HHHHhcC--CCceeeeeceeeeCCceEEEEEecCC
Q 039021          139 MVEQGVF-GESQTAKWR-GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELR--HPNILQFLGSIVLGEEMILITEYLPK  213 (464)
Q Consensus       139 ~lg~G~~-g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~--hpnIv~~~~~~~~~~~~~lv~E~~~~  213 (464)
                      .+..|.. +.||+...+ +..+++|.-....      ...+..| ..|+.+.  .--+.+++.+..+++..++|||+++|
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            3444443 578988875 5567888766432      2245666 6666653  23367788888888889999999998


Q ss_pred             CChH
Q 039021          214 GNLK  217 (464)
Q Consensus       214 g~L~  217 (464)
                      .++.
T Consensus        91 ~~~~   94 (255)
T d1nd4a_          91 QDLL   94 (255)
T ss_dssp             EETT
T ss_pred             cccc
Confidence            6653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.42  E-value=0.014  Score=54.53  Aligned_cols=77  Identities=9%  Similarity=-0.084  Sum_probs=47.5

Q ss_pred             cccccceeeeeEEeEEe--CceEEEEEeeccCCch----HHHHHhHHHH-HHHHhcC---CCceeeeeceeeeCCceEEE
Q 039021          138 SMVEQGVFGESQTAKWR--GTWVVKTVIKSHIYHP----VKMVLSAKDN-CKLRELR---HPNILQFLGSIVLGEEMILI  207 (464)
Q Consensus       138 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~----~~~~~~~~~e-~~l~~l~---hpnIv~~~~~~~~~~~~~lv  207 (464)
                      +.||.|....||+....  ++.|++|.-.......    .....+...| +.|+.+.   ...+.+++.+  +++..++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            46899999999999863  6789999754321000    0112234456 6666552   2457777754  45566899


Q ss_pred             EEecCCCCh
Q 039021          208 TEYLPKGNL  216 (464)
Q Consensus       208 ~E~~~~g~L  216 (464)
                      ||++.+..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EeccCCccc
Confidence            999987543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=84.98  E-value=0.74  Score=40.90  Aligned_cols=66  Identities=5%  Similarity=-0.109  Sum_probs=40.0

Q ss_pred             eeeEEeEE-eCceEEEEEeeccCCchHHHHHhHHHH-HHHHhcCCCc-----eeeee--ceeeeCCceEEEEEecCCCC
Q 039021          146 GESQTAKW-RGTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPN-----ILQFL--GSIVLGEEMILITEYLPKGN  215 (464)
Q Consensus       146 g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e-~~l~~l~hpn-----Iv~~~--~~~~~~~~~~lv~E~~~~g~  215 (464)
                      -.||++.. +|+.|++|+.+.....    .+++..| ..|..|....     .+..-  ..+...+..+.++++++|..
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~~s----~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCCCC----HHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            46888886 5888999998764322    2345566 6666653211     11111  12234566889999998744