Citrus Sinensis ID: 039030

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHcccEEEEccccEEEEEccccccccccccccccccCEECcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHcccccHHHHHHHHHccccccccccCEEEEEEEEccccccEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccCEEEcccccccccccEEcccccccc
******S*************************************************************IRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRA**
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MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Allene oxide synthase, chloroplastic probableQ96242
Allene oxide synthase 1, chloroplastic Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Converts 13-hydroperoxylinolenic acid to 12,13-epoxylinolenic acid.probableQ7Y0C8
Allene oxide synthase Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Acts on a number of unsaturated fatty-acid hydroperoxides, forming the corresponding allene oxides.probableQ40778

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.1.-Hydro-lyases.probable
4.2.1.92Hydroperoxide dehydratase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DSK, chain A
Confidence level:very confident
Coverage over the Query: 66-521
View the alignment between query and template
View the model in PyMOL