Citrus Sinensis ID: 039030

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHcccEEEEccccEEEEEccccccccccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHcccccHHHHHHHHHccccccccccEEEEEEEEEccccccEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccEEEEcccccccccccEEcccccccc
cccccccccccccccccccccccccccccccEEEEcccEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHcccEEEEEccccEEEEEEcccccEEEcccHcccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccEcHHHHHHHHHHHHHHHHHHHccccccHHHccccccEEEcccccEEEEEcccEEEEEcccccccccccccccccccHHccHccHHHcccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEEccc
mastslsfsllptefqsprkssklytprvrsaairprpitasisekqsvpvpppiiispsdeqptklpirkipgsyglpylgpikdRQDYLYNLGRDEFFKSKIQKYGstvfranmppvivlldgksfpvlfdvskvekkdlftgtympstdltggyrvlsyldpsepnhaKLKQLLFFLLMNrrdkvipeFHSTYTEAFETLERDLAAkgkadfsgaNEQAAFNFLARawfgknpadttlgsdaptlIGKWILFQLapllslglpklveepllrtrplppalvkkdYQRLYDFfhessgfvldeaeklgvsreeaCHNLVFATcfnsfggmkilfPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRmeppvalqygkakrdliISSHEAsfevkegemlfgyqpfatkdpkIFERAEEFVADRFVGEGEKMLKHVLWsngpetenptvgnkqcagKDFVVLASRLLLVELFLRYdsfdiqvgksaigssvtltslkrasf
mastslsfsllptefqsprkssklytprvrsaairprpitasisekqsvpvpppiiispsdeqptklpirkipgsyglpylgpIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVekkdlftgtympstdltgGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEepllrtrplppalvKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSfdiqvgksaigssvtltslkrasf
MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQsvpvpppiiispsDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWIlfqlapllslglpklveepllrtrplppalvKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF
********************************************************************IRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNG******TVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIG*************
******S******************************************************************GSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDP*EP*HAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLY***********************ACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVV***GGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRA**
MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF
****************************VRSAAIRPRPITASIS**********************LPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRAS*
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MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPPVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
P48417536 Allene oxide synthase, ch N/A no 0.931 0.908 0.686 0.0
Q96242518 Allene oxide synthase, ch yes no 0.942 0.951 0.651 0.0
Q40778473 Allene oxide synthase OS= N/A no 0.877 0.970 0.653 0.0
Q7Y0C8512 Allene oxide synthase 1, yes no 0.940 0.960 0.586 1e-166
Q7XYS3478 Allene oxide synthase 2 O no no 0.862 0.943 0.558 1e-132
Q8W2N5478 9-divinyl ether synthase N/A no 0.875 0.958 0.446 1e-121
Q0PHS9478 9-divinyl ether synthase N/A no 0.889 0.972 0.443 1e-120
Q9FPM6478 9-divinyl ether synthase N/A no 0.875 0.958 0.446 1e-120
Q9AVQ1478 9-divinyl ether synthase N/A no 0.875 0.958 0.440 1e-119
Q6Z6K9510 Allene oxide synthase 4 O no no 0.879 0.901 0.460 1e-116
>sp|P48417|CP74_LINUS Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1 Back     alignment and function desciption
 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/497 (68%), Positives = 409/497 (82%), Gaps = 10/497 (2%)

Query: 37  RPITASISEKQSVPVPPPIIISPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGR 96
           RPI AS+     + +P      P     T LPIR+IPG YGLP +GPI+DR DY YN GR
Sbjct: 40  RPIKASLFGDSPIKIPGITSQPPPSSDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGR 99

Query: 97  DEFFKSKIQKYGSTVFRANMPP---------VIVLLDGKSFPVLFDVSKVEKKDLFTGTY 147
           +EFFKS++QKY STV+RANMPP         VIVLLD KSFPVLFD+SKVEKKDLFTGTY
Sbjct: 100 EEFFKSRLQKYKSTVYRANMPPGPFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTY 159

Query: 148 MPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDL 207
           MPST+LTGGYR+LSYLDPSEPNH KLKQLLF L+ NRRD VIPEF S++T+  E +E DL
Sbjct: 160 MPSTELTGGYRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSFTDLCEVVEYDL 219

Query: 208 AAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPK 267
           A KGKA F+   EQAAFNFL+RA+FG  P DT LG DAP+LI KW+LF LAP+LS+GLPK
Sbjct: 220 ATKGKAAFNDPAEQAAFNFLSRAFFGVKPIDTPLGKDAPSLISKWVLFNLAPILSVGLPK 279

Query: 268 LVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFN 327
            VEE  L +  LPP LV+ DY RLY+FF  ++G VLDEAE+ G+SR+EACHN++FA CFN
Sbjct: 280 EVEEATLHSVRLPPLLVQNDYHRLYEFFTSAAGSVLDEAEQSGISRDEACHNILFAVCFN 339

Query: 328 SFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSN-GGKVTMAGMEQMPWMKSVVYE 386
           S+GG KILFP+++KWIGR G++LH +LA+EIRS ++S  GGKVTMA MEQMP MKSVVYE
Sbjct: 340 SWGGFKILFPSLMKWIGRAGLELHTKLAQEIRSAIQSTGGGKVTMAAMEQMPLMKSVVYE 399

Query: 387 VLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADR 446
            LR+EPPVALQYGKAK+D I+ SHEA+++VKEGEMLFGYQPFATKDPKIF+R EEFVADR
Sbjct: 400 TLRIEPPVALQYGKAKKDFILESHEAAYQVKEGEMLFGYQPFATKDPKIFDRPEEFVADR 459

Query: 447 FVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGK 506
           FVGEG K++++V+WSNGPETE P+V NKQCAGKDFVV+A+RL +VELF RYDSFDI+VG 
Sbjct: 460 FVGEGVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFDIEVGT 519

Query: 507 SAIGSSVTLTSLKRASF 523
           S++G+S+TLTSLKR++F
Sbjct: 520 SSLGASITLTSLKRSTF 536
Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Acts on a number of unsaturated fatty-acid hydroperoxides, forming the corresponding allene oxides.
Linum usitatissimum (taxid: 4006)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 9EC: 2
>sp|Q96242|CP74A_ARATH Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3 Back     alignment and function description
>sp|Q40778|C74A2_PARAR Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2 Back     alignment and function description
>sp|Q7Y0C8|C74A1_ORYSJ Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1 Back     alignment and function description
>sp|Q7XYS3|C74A2_ORYSJ Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2 Back     alignment and function description
>sp|Q8W2N5|DES_TOBAC 9-divinyl ether synthase OS=Nicotiana tabacum GN=DES1 PE=1 SV=1 Back     alignment and function description
>sp|Q0PHS9|DES_CAPAN 9-divinyl ether synthase OS=Capsicum annuum GN=DES PE=2 SV=1 Back     alignment and function description
>sp|Q9FPM6|DES_SOLLC 9-divinyl ether synthase OS=Solanum lycopersicum GN=DES PE=1 SV=1 Back     alignment and function description
>sp|Q9AVQ1|DES_SOLTU 9-divinyl ether synthase OS=Solanum tuberosum GN=DES PE=1 SV=1 Back     alignment and function description
>sp|Q6Z6K9|C74A4_ORYSJ Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
29373135532 allene oxide synthase [Citrus sinensis] 1.0 0.983 0.973 0.0
224067296526 cytochrome P450 allene oxide synthase [P 0.988 0.982 0.721 0.0
83404758527 allene oxide synthase protein [Lonicera 0.952 0.944 0.724 0.0
255689630523 allene oxide synthase [Camellia sinensis 0.975 0.975 0.714 0.0
225458434520 PREDICTED: allene oxide synthase, chloro 0.977 0.982 0.704 0.0
84028363524 latex allene oxide synthase [Hevea brasi 0.984 0.982 0.669 0.0
63029720524 allene oxide synthase [Hevea brasiliensi 0.984 0.982 0.669 0.0
339730742519 allene oxide synthase [Ipomoea nil] 0.973 0.980 0.684 0.0
255538510518 cytochrome P450, putative [Ricinus commu 0.973 0.982 0.665 0.0
351721547519 allene oxide synthase [Glycine max] gi|8 0.917 0.924 0.711 0.0
>gi|29373135|gb|AAO72741.1| allene oxide synthase [Citrus sinensis] Back     alignment and taxonomy information
 Score =  996 bits (2574), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/532 (97%), Positives = 519/532 (97%), Gaps = 9/532 (1%)

Query: 1   MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPS 60
           MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPS
Sbjct: 1   MASTSLSFSLLPTEFQSPRKSSKLYTPRVRSAAIRPRPITASISEKQSVPVPPPIIISPS 60

Query: 61  DEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP-- 118
           DEQPTKLPIRKIPGSYGLPYLGPIKDRQDY YNLGRDEFFKSKIQKYGSTVFRANMPP  
Sbjct: 61  DEQPTKLPIRKIPGSYGLPYLGPIKDRQDYFYNLGRDEFFKSKIQKYGSTVFRANMPPGP 120

Query: 119 -------VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHA 171
                  VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHA
Sbjct: 121 FISSNPKVIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHA 180

Query: 172 KLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAW 231
           KLKQLLFFLLMNRRDKVIPE HSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAW
Sbjct: 181 KLKQLLFFLLMNRRDKVIPELHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAW 240

Query: 232 FGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRL 291
           FGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRL
Sbjct: 241 FGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRL 300

Query: 292 YDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLH 351
           YDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLH
Sbjct: 301 YDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLH 360

Query: 352 MQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHE 411
           MQLAEEIRSVVRSNGGKVTMAGMEQMP MKSVVYEVLRMEPPVALQYGKAKRDLIISSHE
Sbjct: 361 MQLAEEIRSVVRSNGGKVTMAGMEQMPLMKSVVYEVLRMEPPVALQYGKAKRDLIISSHE 420

Query: 412 ASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTV 471
           ASFEVKEGEMLFGYQPFATKDPKIFE+AEEFVADRFVGEGEKMLKHVLWSNGPETENP V
Sbjct: 421 ASFEVKEGEMLFGYQPFATKDPKIFEQAEEFVADRFVGEGEKMLKHVLWSNGPETENPPV 480

Query: 472 GNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF 523
           GNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF
Sbjct: 481 GNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF 532

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224067296|ref|XP_002302453.1| cytochrome P450 allene oxide synthase [Populus trichocarpa] gi|222844179|gb|EEE81726.1| cytochrome P450 allene oxide synthase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|83404758|gb|ABC17856.1| allene oxide synthase protein [Lonicera japonica] Back     alignment and taxonomy information
>gi|255689630|gb|ACU30142.1| allene oxide synthase [Camellia sinensis] Back     alignment and taxonomy information
>gi|225458434|ref|XP_002283780.1| PREDICTED: allene oxide synthase, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|84028363|gb|ABC49700.1| latex allene oxide synthase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|63029720|gb|AAY27751.1| allene oxide synthase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|339730742|dbj|BAK52267.1| allene oxide synthase [Ipomoea nil] Back     alignment and taxonomy information
>gi|255538510|ref|XP_002510320.1| cytochrome P450, putative [Ricinus communis] gi|223551021|gb|EEF52507.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|351721547|ref|NP_001236445.1| allene oxide synthase [Glycine max] gi|82796032|gb|ABB91777.1| allene oxide synthase [Glycine max] gi|169786998|gb|ACA79943.1| chloroplast allene oxide synthase [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2165452518 AOS "allene oxide synthase" [A 0.950 0.959 0.605 7.1e-164
TAIR|locus:2130145384 HPL1 "hydroperoxide lyase 1" [ 0.405 0.552 0.441 2.6e-59
MGI|MGI:104978507 Cyp7b1 "cytochrome P450, famil 0.288 0.297 0.282 7.6e-08
RGD|2483414 Cyp7b1 "cytochrome P450, famil 0.277 0.350 0.257 1.3e-07
UNIPROTKB|Q63688414 Cyp7b1 "25-hydroxycholesterol 0.277 0.350 0.257 1.3e-07
UNIPROTKB|O75881506 CYP7B1 "25-hydroxycholesterol 0.271 0.280 0.271 5e-07
UNIPROTKB|Q947B7493 Q947B7 "(+)-menthofuran syntha 0.288 0.306 0.263 8e-07
FB|FBgn0038236492 Cyp313a1 "Cyp313a1" [Drosophil 0.250 0.266 0.232 8.5e-07
FB|FBgn0033982518 Cyp317a1 "Cyp317a1" [Drosophil 0.309 0.312 0.264 8.6e-07
UNIPROTKB|F1PTV4502 CYP7B1 "Uncharacterized protei 0.277 0.288 0.288 2.3e-06
TAIR|locus:2165452 AOS "allene oxide synthase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 309/510 (60%), Positives = 381/510 (74%)

Query:    24 LYTPRVRSAAIRPRPITASISEKQXXXXXXXXXXXXXDEQPTKLPIRKIPGSYGLPYLGP 83
             L+   VRS  ++ R +T  I                  +    LPIR IPG+YGLP +GP
Sbjct:    12 LHPKTVRSKPLKFRVLTRPIKASGSETPDLTVATRTGSKD---LPIRNIPGNYGLPIVGP 68

Query:    84 IKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP---------VIVLLDGKSFPVLFDV 134
             IKDR DY Y+ G +EFFKS+I+KY STV+R NMPP         V+ LLDGKSFPVLFDV
Sbjct:    69 IKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDV 128

Query:   135 SKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHS 194
              KVEKKDLFTGTYMPST+LTGGYR+LSYLDPSEP H KLK LLFFLL + R+++ PEF +
Sbjct:   129 DKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQA 188

Query:   195 TYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWIX 254
             TY+E F++LE++L+ KGKADF G+++  AFNFLARA++G NPADT L +DAP LI KW+ 
Sbjct:   189 TYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVL 248

Query:   255 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDYQRLYDFFHESSGFVLDEAEKLGVSRE 314
                                           K DYQRLY+FF ES+G +L EA+KLG+SRE
Sbjct:   249 FNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADKLGISRE 308

Query:   315 EACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVVRSNGGKVTMAGM 374
             EA HNL+FATCFN++GGMKILFPNMVK IGR G ++H +LAEEIRSV++SNGG++TM  +
Sbjct:   309 EATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAI 368

Query:   375 EQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPK 434
             E+M   KSVVYE LR EPPV  QYG+AK+DL+I SH+A+F+VK GEML+GYQP AT+DPK
Sbjct:   369 EKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPK 428

Query:   435 IFERAEEFVADRFVGE-GEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVEL 493
             IF+RA+EFV +RFVGE GEK+L+HVLWSNGPETE PTVGNKQCAGKDFVVL +RL ++E+
Sbjct:   429 IFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEI 488

Query:   494 FLRYDSFDIQVGKSAIGSSVTLTSLKRASF 523
             F RYDSFDI+VG S +GSSV  +SL++ASF
Sbjct:   489 FRRYDSFDIEVGTSPLGSSVNFSSLRKASF 518
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009611 "response to wounding" evidence=IEP;RCA;IMP
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA;IMP
GO:0009695 "jasmonic acid biosynthetic process" evidence=IDA;RCA;TAS
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0006952 "defense response" evidence=TAS
GO:0010287 "plastoglobule" evidence=IDA
GO:0009978 "allene oxide synthase activity" evidence=IDA
GO:0031407 "oxylipin metabolic process" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009579 "thylakoid" evidence=IDA
GO:0009620 "response to fungus" evidence=IEP;RCA
GO:0009534 "chloroplast thylakoid" evidence=IDA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0009694 "jasmonic acid metabolic process" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0019373 "epoxygenase P450 pathway" evidence=ISS
GO:0019825 "oxygen binding" evidence=ISS
GO:0016836 "hydro-lyase activity" evidence=IDA
TAIR|locus:2130145 HPL1 "hydroperoxide lyase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:104978 Cyp7b1 "cytochrome P450, family 7, subfamily b, polypeptide 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2483 Cyp7b1 "cytochrome P450, family 7, subfamily b, polypeptide 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q63688 Cyp7b1 "25-hydroxycholesterol 7-alpha-hydroxylase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O75881 CYP7B1 "25-hydroxycholesterol 7-alpha-hydroxylase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q947B7 Q947B7 "(+)-menthofuran synthase" [Mentha x piperita (taxid:34256)] Back     alignment and assigned GO terms
FB|FBgn0038236 Cyp313a1 "Cyp313a1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0033982 Cyp317a1 "Cyp317a1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1PTV4 CYP7B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96242CP74A_ARATH4, ., 2, ., 1, ., 9, 20.65170.94260.9517yesno
Q7Y0C8C74A1_ORYSJ4, ., 2, ., 1, ., 9, 20.58650.94070.9609yesno
Q40778C74A2_PARAR4, ., 2, ., 1, ., 9, 20.65310.87760.9704N/Ano
P48417CP74_LINUS4, ., 2, ., 1, ., 9, 20.68610.93110.9085N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.2.1.920.991
3rd Layer4.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CYP74A1
cytochrome P450 allene oxide synthase (EC-4.2.1.92) (526 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.659.1
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plan [...] (771 aa)
     •• 0.902
gw1.VIII.1781.1
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects [...] (835 aa)
     •• 0.902
gw1.IX.4476.1
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plan [...] (784 aa)
     •• 0.902
gw1.I.7365.1
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plan [...] (845 aa)
     •• 0.902
fgenesh4_pg.C_scaffold_70000249
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects [...] (847 aa)
     •• 0.902
fgenesh4_pg.C_LG_III000259
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects [...] (925 aa)
     •• 0.902
fgenesh4_pg.C_LG_I000375
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plan [...] (897 aa)
     •• 0.902
eugene3.00700243
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects [...] (798 aa)
     •• 0.902
eugene3.00130201
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects [...] (871 aa)
     •• 0.902
estExt_fgenesh4_pm.C_LG_X0170
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plan [...] (825 aa)
     •• 0.902

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
PLN02648480 PLN02648, PLN02648, allene oxide synthase 0.0
pfam00067461 pfam00067, p450, Cytochrome P450 4e-07
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 8e-07
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 0.002
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase Back     alignment and domain information 
 Score =  805 bits (2081), Expect = 0.0
 Identities = 303/476 (63%), Positives = 367/476 (77%), Gaps = 10/476 (2%)

Query: 58  SPSDEQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMP 117
           S S    + LP+R+IPGSYGLP+LG IKDR DY Y  G DEFF+S+++KY STVFR NMP
Sbjct: 5   SSSSSSSSSLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMP 64

Query: 118 P---------VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEP 168
           P         VI LLD KSFPVLFDVSKV+K+D+FTGTYMPST  TGGYRVLSYLDPSEP
Sbjct: 65  PGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYMPSTAFTGGYRVLSYLDPSEP 124

Query: 169 NHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLA 228
            HAKLK  LF LL +R  + IPEF + + E F+T E +LA KGKA+F+   +Q AFNFL 
Sbjct: 125 KHAKLKSFLFELLKSRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLDQMAFNFLC 184

Query: 229 RAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDY 288
           +A  GK+P++T LGSD P LI KW+  QLAPL S GLP ++EE LL T PLP  LVK DY
Sbjct: 185 KALTGKDPSETALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDY 244

Query: 289 QRLYDFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGV 348
            +LYDFF  S+   LD AEK G+SREEA HNL+F   FN+FGG KI FP ++KW+GR G 
Sbjct: 245 DKLYDFFRASATEALDLAEKFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGE 304

Query: 349 KLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIIS 408
           +L  +LAEE+RS V++ GG VT A +E+MP +KSVVYE LR+EPPV  QYG+A+ D +I 
Sbjct: 305 ELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIE 364

Query: 409 SHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETE 467
           SH+A+FE+K+GEMLFGYQP  T+DPK+F+R EEFV DRF+G EGEK+LK+V WSNG ETE
Sbjct: 365 SHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETE 424

Query: 468 NPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF 523
           +PTVGNKQCAGKDFVVL +RL + ELFLRYDSF+I+V  S +GSSVT TSLK+ASF
Sbjct: 425 SPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTSGLGSSVTFTSLKKASF 480

Length = 480
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
PLN02648480 allene oxide synthase 100.0
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PLN02971543 tryptophan N-hydroxylase 100.0
PTZ00404482 cytochrome P450; Provisional 100.0
PLN03234499 cytochrome P450 83B1; Provisional 100.0
PLN02966502 cytochrome P450 83A1 100.0
PLN02183516 ferulate 5-hydroxylase 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PLN02290516 cytokinin trans-hydroxylase 100.0
PLN02500490 cytochrome P450 90B1 100.0
PLN02687517 flavonoid 3'-monooxygenase 100.0
PLN00168519 Cytochrome P450; Provisional 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN02738633 carotene beta-ring hydroxylase 100.0
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02655466 ent-kaurene oxidase 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN03112514 cytochrome P450 family protein; Provisional 100.0
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN03195516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
PLN03018534 homomethionine N-hydroxylase 100.0
PLN02302490 ent-kaurenoic acid oxidase 100.0
PLN02936489 epsilon-ring hydroxylase 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PLN02987472 Cytochrome P450, family 90, subfamily A 100.0
PLN02426502 cytochrome P450, family 94, subfamily C protein 100.0
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 100.0
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 100.0
>PLN02648 allene oxide synthase Back     alignment and domain information 
Probab=100.00  E-value=1.6e-72  Score=583.52  Aligned_cols=460  Identities=65%  Similarity=1.113  Sum_probs=391.9

Q ss_pred             CCCCCCCCCCCCCCCCCccccccchhhhhhccchhHHHHHHHHHhCCceEEecCCC--E-------EEEcCCCchhhhcc
Q 039030           63 QPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP--V-------IVLLDGKSFPVLFD  133 (523)
Q Consensus        63 ~~~~~Pl~~iPGp~glP~iG~~~~~~~~~~~~~~~~~~~~~~~kyG~~v~r~~~~~--~-------vvv~dp~~~~~i~~  133 (523)
                      +.+.+|++.|||+.|||++|+..+++++.+..++..|+.++++|||++||++++++  +       |+++||+.++.+|+
T Consensus        10 ~~~~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~   89 (480)
T PLN02648         10 SSSSLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFD   89 (480)
T ss_pred             CCCCCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeec
Confidence            55678888899999999999999988877778889999999999997799999964  5       99999999999999


Q ss_pred             cccccccCCCCCCccCcccccCCceeeeecCCCchhHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHhcCCcc
Q 039030          134 VSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKA  213 (523)
Q Consensus       134 ~~~~~k~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v  213 (523)
                      ++++.+.+.+.+.+..+..++|++...++.+.+|+.|+++|+++.+.|+...+.+.+.|.+.+.+++++|......++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         90 VSKVDKRDVFTGTYMPSTAFTGGYRVLSYLDPSEPKHAKLKSFLFELLKSRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             chhccccccceeeeccCccccCCceeeeecCCCCchHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            87788888888888777778888776788888999999999999999995338899999999999999997654456679


Q ss_pred             ChHHHHHHHHHHHHHHHHcCCCCCCcccCCChhhhHhHHHHhhhhhhhhhcchhhhhhhhhccCCCCchhhhhhHHHHHH
Q 039030          214 DFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYD  293 (523)
Q Consensus       214 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (523)
                      |+.+.++.+++|++++++||.+.++.++.+.+..+...+......+.....++.+++..+...++.+.....+.++++.+
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~  249 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYDKLYD  249 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhhccHHHHHH
Confidence            99999999999999999999987664455555555555544334454455556555554444333332222355666777


Q ss_pred             HHHHhHHHHHHhhhhcCCCHHHHHHHHHHHHHhhhcchhhhHHHHHHHHHHhcChH-HHHHHHHHHHHHHhcCCCccChh
Q 039030          294 FFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVK-LHMQLAEEIRSVVRSNGGKVTMA  372 (523)
Q Consensus       294 ~~~~~~~~~l~~~~~~~ls~ee~~~~~l~~~~~~~~~~~~~~l~~~l~~L~~~~P~-~~~kl~~Ei~~~~~~~~~~~t~~  372 (523)
                      .+.+...++++..++.+++++|++++++++++++++++++++++|++|+|++| |+ +|++|++||+++.+.+++.++++
T Consensus       250 ~~~~~~~~ll~~~~~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~-p~~v~~klr~Ei~~~~~~~~~~~t~~  328 (480)
T PLN02648        250 FFRASATEALDLAEKFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRA-GEELQARLAEEVRSAVKAGGGGVTFA  328 (480)
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHhccCCCCCCHH
Confidence            77777778887776678999999999998889999999999999999999998 85 99999999999986444579999


Q ss_pred             hhcCChhHHHHHHHhhcCCCCcccccccccCCeEecccCCceEecCCCEEEeeccccccCCcccCCCCCcccCcccCc-c
Q 039030          373 GMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGE-G  451 (523)
Q Consensus       373 ~l~~lp~l~a~i~EtLRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~-~  451 (523)
                      ++++||||++||+|+||++|+++...|++.+|+++++.++||.||||+.|+++.+.+|+||++|+||++|+||||+++ +
T Consensus       329 ~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~  408 (480)
T PLN02648        329 ALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEG  408 (480)
T ss_pred             HHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCc
Confidence            999999999999999999999999999999999998665689999999999999999999999999999999999975 3


Q ss_pred             ccccceeecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceeecccccccccCceeeeeeccccC
Q 039030          452 EKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF  523 (523)
Q Consensus       452 ~~~~~~~~fg~G~~~~~fg~g~r~C~G~~lA~~~~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~k~~~  523 (523)
                      .....+++||.|+.+++||+|.|.|+|++||.+|++++++.|+++|+...+..+.+.++..++|++++||++
T Consensus       409 ~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~  480 (480)
T PLN02648        409 EKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTSGLGSSVTFTSLKKASF  480 (480)
T ss_pred             cccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCccccccceeeeeeeecCC
Confidence            344689999999999999999999999999999999999999999994446778889999999999999986

>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
2rch_A495 Crystal Structure Of Arabidopsis Thaliana Allene Ox 1e-175
2rcm_A495 Crystal Structure Of Arabidopsis Thaliana Allene Ox 1e-175
3dam_A473 Crystal Structure Of Allene Oxide Synthase Length = 1e-170
2ve3_A444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 1e-07
3sn5_A491 Crystal Structure Of Human Cyp7a1 In Complex With C 1e-05
3dax_A491 Crystal Structure Of Human Cyp7a1 Length = 491 1e-05
3b98_A475 Crystal Structure Of Zebrafish Prostacyclin Synthas 7e-05
1ea1_A455 Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) 2e-04
2w0a_A455 Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[( 2e-04
1x8v_A455 Estriol-Bound And Ligand-Free Structures Of Sterol 2e-04
1u13_A455 Crystal Structure Analysis Of The C37lC151TC442A-Tr 2e-04
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed With 13(S)-Hod At 1.85 A Resolution Length = 495 Back     alignment and structure 
Iteration: 1

 Score =  612 bits (1577), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 302/467 (64%), Positives = 369/467 (79%), Gaps = 10/467 (2%)
Query: 67  LPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP-------- 118
           LPIR IPG+YGLP +GPIKDR DY Y+ G +EFFKS+I+KY STV+R NMPP        
Sbjct: 25  LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENP 84
Query: 119 -VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLL 177
            V+ LLDGKSFPVLFDV KVEKKDLFTGTYMPST+LTGGYR+LSYLDPSEP H KLK LL
Sbjct: 85  QVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLL 144
Query: 178 FFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPA 237
           FFLL + R+++ PEF +TY+E F++LE++L+ KGKADF G+++  AFNFLARA++G NPA
Sbjct: 145 FFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNPA 204
Query: 238 DTTLGSDAPTLIGKWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDYQRLYDFFHE 297
           DT L +DAP LI KW+                               K DYQRLY+FF E
Sbjct: 205 DTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLE 264
Query: 298 SSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEE 357
           S+G +L EA+KLG+SREEA HNL+FATCFN++GGMKILFPNMVK IGR G ++H +LAEE
Sbjct: 265 SAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEE 324
Query: 358 IRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVK 417
           IRSV++SNGG++TM  +E+M   KSVVYE LR EPPV  QYG+AK+DL+I SH+A+F+VK
Sbjct: 325 IRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVK 384
Query: 418 EGEMLFGYQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENPTVGNKQC 476
            GEML+GYQP AT+DPKIF+RA+EFV +RFVG EGEK+L+HVLWSNGPETE PTVGNKQC
Sbjct: 385 AGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQC 444
Query: 477 AGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF 523
           AGKDFVVL +RL ++E+F RYDSFDI+VG S +GSSV  +SL++ASF
Sbjct: 445 AGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKASF 491
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450 74a) At 1.73 A Resolution Length = 495 Back     alignment and structure
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase Length = 473 Back     alignment and structure
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With Cholest-4-En-3-One Length = 491 Back     alignment and structure
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1 Length = 491 Back     alignment and structure
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase (Cytochrome P450 8a1) Length = 475 Back     alignment and structure
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From Mycobacterium Tuberculosis In Complex With Fluconazole Length = 455 Back     alignment and structure
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl] Cyclohexanecarboxamide Length = 455 Back     alignment and structure
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol 14alpha- Demethylase (Cyp51) Length = 455 Back     alignment and structure
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple Mutant Of Cyp51 From Mycobacterium Tuberculosis Length = 455 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 0.0
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 1e-177
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 2e-18
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 3e-16
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 3e-11
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 1e-10
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 1e-10
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 1e-09
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 1e-09
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 2e-09
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 3e-09
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 5e-09
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 3e-08
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 1e-07
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 5e-07
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 7e-07
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 8e-07
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 5e-05
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
 Score =  524 bits (1351), Expect = 0.0
 Identities = 307/471 (65%), Positives = 372/471 (78%), Gaps = 11/471 (2%)

Query: 63  QPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLG-RDEFFKSKIQKYGSTVFRANMPP--- 118
            P+  P+R+IPGSYG+P+  PIKDR +Y Y  G RDE+F+S++QKY STVFRANMPP   
Sbjct: 2   DPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPF 61

Query: 119 ------VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAK 172
                 VIVLLD KSFP+LFDVSKVEKKDLFTGTYMPST LTGGYRVLSYLDPSEP HA+
Sbjct: 62  VSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQ 121

Query: 173 LKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWF 232
           LK LLFF+L N  ++VIP+F +TYTE FE LE +LA  GKA F+   EQAAF FL RA+F
Sbjct: 122 LKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYF 181

Query: 233 GKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLY 292
             NP +T LG+ APTLI  W+LF LAP L LGLP  ++EPLL T  LP  L+K  Y +LY
Sbjct: 182 NSNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLY 241

Query: 293 DFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHM 352
           D+F   +  V+++AEKLGV ++EA HN++FA CFN+FGG+KILFPN +KWIG  G  LH 
Sbjct: 242 DYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHT 301

Query: 353 QLAEEIRSVVRSNG-GKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHE 411
           QLAEEIR  ++S G G VT+  +EQMP  KSVVYE LR+EPPV  QYGKAK +  I SH+
Sbjct: 302 QLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHD 361

Query: 412 ASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTV 471
           A+FEVK+GEMLFGYQPFATKDPK+F+R EE+V DRFVG+GE +LK+V WSNGPETE+PTV
Sbjct: 362 ATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTV 421

Query: 472 GNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRAS 522
            NKQCAGKDFVVL +RL ++ELF RYDSF+I++G+S +G++VTLT LKRAS
Sbjct: 422 ENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPLGAAVTLTFLKRAS 472
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 100.0
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 100.0
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 100.0
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 100.0
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 100.0
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 100.0
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 100.0
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 100.0
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 100.0
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 100.0
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 100.0
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 100.0
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 100.0
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 100.0
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 100.0
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 100.0
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 100.0
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 100.0
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 100.0
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 100.0
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 100.0
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 100.0
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 100.0
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 100.0
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 100.0
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 100.0
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 100.0
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 100.0
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 100.0
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 100.0
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 100.0
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 100.0
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-73  Score=602.47  Aligned_cols=460  Identities=70%  Similarity=1.208  Sum_probs=413.5

Q ss_pred             CCCCCCCCCCCCCCCCCCccccccchhhhhhccchhHHHHHHHHHhCCceEEecCCC--E-------EEEcCCCchhhhc
Q 039030           62 EQPTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP--V-------IVLLDGKSFPVLF  132 (523)
Q Consensus        62 ~~~~~~Pl~~iPGp~glP~iG~~~~~~~~~~~~~~~~~~~~~~~kyG~~v~r~~~~~--~-------vvv~dp~~~~~i~  132 (523)
                      ...++.|++.||||+|||+||++++++++++.++++.|+.++++|||++||++++++  +       |++.|++.++.++
T Consensus        20 ~~~~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~   99 (495)
T 3dsk_A           20 TGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLF   99 (495)
T ss_dssp             ----CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGG
T ss_pred             cCCCCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeec
Confidence            345678888999999999999999999988889999999999999999899999974  3       7889999999999


Q ss_pred             ccccccccCCCCCCccCcccccCCceeeeecCCCchhHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHhcCCc
Q 039030          133 DVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGK  212 (523)
Q Consensus       133 ~~~~~~k~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  212 (523)
                      ++++++|.+.+.+.+..+..++|+++...+++.+|+.|+++|+++.+.|+...+.+.+.+++.+.++++.|.+...++++
T Consensus       100 ~~~~v~k~~~~~~~~~~~~~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~~~~~~~i~~~~~~ll~~~~~~~~~~~~  179 (495)
T 3dsk_A          100 DVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGK  179 (495)
T ss_dssp             CTTTEECSSCTTSSSCCCGGGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccccccCCCCccccCCCcceeeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999888877778888777778888899999999999999999755899999999999999999886666789


Q ss_pred             cChHHHHHHHHHHHHHHHHcCCCCCCcccCCChhhhHhHHHHhhhhhhhhhcchhhhhhhhhccCCCCchhhhhhHHHHH
Q 039030          213 ADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPTLIGKWILFQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLY  292 (523)
Q Consensus       213 vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (523)
                      +|+.+++..++++++++++||.++++.+..+....++..+......+.+...+|..+...+.+..+.+...+++.+++..
T Consensus       180 vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (495)
T 3dsk_A          180 ADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLY  259 (495)
T ss_dssp             EESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhHHHHH
Confidence            99999999999999999999998887666677777777777766667666688888888878888777777788888888


Q ss_pred             HHHHHhHHHHHHhhhhcCCCHHHHHHHHHHHHHhhhcchhhhHHHHHHHHHHh-cChHHHHHHHHHHHHHHhcCCCccCh
Q 039030          293 DFFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGR-GGVKLHMQLAEEIRSVVRSNGGKVTM  371 (523)
Q Consensus       293 ~~~~~~~~~~l~~~~~~~ls~ee~~~~~l~~~~~~~~~~~~~~l~~~l~~L~~-~~P~~~~kl~~Ei~~~~~~~~~~~t~  371 (523)
                      +.+.+...++++..++.+++++|+++++++++++++++||+++++|++++|++ | |++|++|++|++++++.+++.+++
T Consensus       260 ~~~~~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~-P~~~~~lr~Ei~~~~~~~~~~~~~  338 (495)
T 3dsk_A          260 EFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAG-HQVHNRLAEEIRSVIKSNGGELTM  338 (495)
T ss_dssp             HHHHHHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHTTTCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHhccCCCCCCH
Confidence            88888888888888888999999999888777799999999999999999996 7 999999999999999887678999


Q ss_pred             hhhcCChhHHHHHHHhhcCCCCcccccccccCCeEecccCCceEecCCCEEEeeccccccCCcccCCCCCcccCcccCc-
Q 039030          372 AGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGE-  450 (523)
Q Consensus       372 ~~l~~lp~l~a~i~EtLRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~-  450 (523)
                      +++++||||+|||+|+||++|+++...|++.+|++|.++++||.||||+.|+++.+.+|+||++|+||++|+||||+++ 
T Consensus       339 ~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~  418 (495)
T 3dsk_A          339 GAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE  418 (495)
T ss_dssp             HHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHH
T ss_pred             HHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCC
Confidence            9999999999999999999999999999999999998766799999999999999999999999999999999999986 


Q ss_pred             cccccceeecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceeecccccccccCceeeeeecccc
Q 039030          451 GEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRAS  522 (523)
Q Consensus       451 ~~~~~~~~~fg~G~~~~~fg~g~r~C~G~~lA~~~~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~k~~  522 (523)
                      +.....|++||.|+.+++||.|+|.|+|++||.+|++++++.|+++||++.++++........++++++|++
T Consensus       419 ~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  490 (495)
T 3dsk_A          419 GEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKAS  490 (495)
T ss_dssp             HHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEEECSSSEEEEEEEEEEC-
T ss_pred             ccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCCCCccccccccceechhcc
Confidence            445678999999999999999999999999999999999999999999999988888888889999999876
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 523
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 5e-14
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 3e-12
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 4e-11
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 3e-10
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 4e-10
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 3e-06
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 2e-05
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 3e-05
d1s1fa_399 a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [ 3e-04
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 3e-04
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 5e-04
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 0.001
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 0.002
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 0.002
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 0.003
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 0.004
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (174), Expect = 5e-14
 Identities = 76/457 (16%), Positives = 146/457 (31%), Gaps = 56/457 (12%)

Query: 70  RKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTV-FRANMPPVIVLLDGKSF 128
             IPG   LP+LG I       Y+ G   F     +KYG    F     PV+ + D    
Sbjct: 9   LGIPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMI 63

Query: 129 PVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRR-DK 187
             +     V++         P   +      +S  +       +L+ LL     + +  +
Sbjct: 64  KTVL----VKECYSVFTNRRPFGPVGFMKSAISIAED--EEWKRLRSLLSPTFTSGKLKE 117

Query: 188 VIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPADTTLGSDAPT 247
           ++P            L R+                + + +    FG N        D   
Sbjct: 118 MVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV 177

Query: 248 LIGKWIL----FQLAPLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHESSGFVL 303
              K +L         L     P L+  P+L    +     ++    L           L
Sbjct: 178 ENTKKLLRFDFLDPFFLSITVFPFLI--PILEVLNI-CVFPREVTNFLRKSVKRMKESRL 234

Query: 304 DEAEKLGVSREEACHNLVFATCFNSFGGM----KILFPNMVKWIGRGGVKLHMQLA---- 355
           ++ +K  V   +   +   +    S   +     +    +  + G       +       
Sbjct: 235 EDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYEL 294

Query: 356 -----------EEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRD 404
                      EEI +V+  N    T   + QM ++  VV E LR+ P         K+D
Sbjct: 295 ATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKD 353

Query: 405 LIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLK---HVLWS 461
           + I+       + +G ++        +DPK +   E+F+ +RF  + +  +    +  + 
Sbjct: 354 VEINGM----FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFG 409

Query: 462 NGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYD 498
           +GP         + C G  F ++  +L L+ +   + 
Sbjct: 410 SGP---------RNCIGMRFALMNMKLALIRVLQNFS 437
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Length = 399 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 100.0
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 100.0
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 100.0
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 100.0
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 100.0
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 100.0
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 100.0
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 100.0
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 100.0
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 100.0
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 100.0
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 100.0
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 100.0
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-63  Score=513.96  Aligned_cols=414  Identities=17%  Similarity=0.228  Sum_probs=314.8

Q ss_pred             CCCCCCCCCCccccccchhhhhhccchhHHHHHHHHHhCCceEEecCCC--EEEEcCCCchhhhcccccccccCCCCCCc
Q 039030           70 RKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP--VIVLLDGKSFPVLFDVSKVEKKDLFTGTY  147 (523)
Q Consensus        70 ~~iPGp~glP~iG~~~~~~~~~~~~~~~~~~~~~~~kyG~~v~r~~~~~--~vvv~dp~~~~~i~~~~~~~k~~~~~~~~  147 (523)
                      ++||||+|+|+|||++++.     ++++.++.++++|||+ ||++++++  +|||+||+.+++||.++.   ...+.++.
T Consensus         9 ~~iPGP~~~P~iG~~~~~~-----~~~~~~~~~~~~kyG~-i~~~~l~~~~~vvv~~p~~~~~il~~~~---~~~~~~~~   79 (472)
T d1tqna_           9 LGIPGPTPLPFLGNILSYH-----KGFCMFDMECHKKYGK-VWGFYDGQQPVLAITDPDMIKTVLVKEC---YSVFTNRR   79 (472)
T ss_dssp             TTCCCCCCBTTTBTGGGGG-----GCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTTTT---TTTCCBCC
T ss_pred             cCCCCCCCcCceeEHHHhh-----CCHHHHHHHHHHHhCC-EEEEEECCeeEEEECCHHHHHHHHhcCC---cccccCCc
Confidence            4689999999999999875     6899999999999999 99999885  999999999999995432   12333321


Q ss_pred             cC-cccccCCceeeeecCCCchhHHHHHHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHhcCCccChHHHHHHHHHH
Q 039030          148 MP-STDLTGGYRVLSYLDPSEPNHAKLKQLLFFLLMNRR-DKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFN  225 (523)
Q Consensus       148 ~~-~~~~~g~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~  225 (523)
                      .. ...+.+.    .++..+|+.|+++|+++.+.|+.+. +.+.+.+++.+.++++.|.+....+..+|+.+.+.+++++
T Consensus        80 ~~~~~~~~~~----~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~dl~~~~~~~~~~  155 (472)
T d1tqna_          80 PFGPVGFMKS----AISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMD  155 (472)
T ss_dssp             CCSCCGGGGG----STTTCCHHHHHHHHHHTTGGGSHHHHHTTHHHHHHHHHHHHHHHHHHHHHSSCEEHHHHHHHHHHH
T ss_pred             ccccccccCC----ceeccCcHHHHHhhhhcCccccchhhhcccchhhhhhhcccccccccccccccchhhhhhhccchh
Confidence            11 1112222    3445689999999999999999888 9999999999999999999888788899999999999999


Q ss_pred             HHHHHHcCCCCCCcccCCChhhhHhHHHH---hhh---hhhhhhcchhhhhhhhhccCCCCchhhhhhHHHHHHHHHHh-
Q 039030          226 FLARAWFGKNPADTTLGSDAPTLIGKWIL---FQL---APLLSLGLPKLVEEPLLRTRPLPPALVKKDYQRLYDFFHES-  298 (523)
Q Consensus       226 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  298 (523)
                      +++.++||.+++..+  +...........   ...   .......+|.+.................+......+...+. 
T Consensus       156 v~~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (472)
T d1tqna_         156 VITSTSFGVNIDSLN--NPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR  233 (472)
T ss_dssp             HHHHTSSCCCCCGGG--CTTCHHHHHHTTCCCCCTTSHHHHHHHHCGGGHHHHHHTTCCSSCHHHHHHHHHHHHHHHTTT
T ss_pred             hhhheeccccccccc--ccchhhhHHHHHHhhhhhccchhcccccccccccccccccccccchhhhHHHHHHHHHhhhcc
Confidence            999999999987622  111111111100   000   00011112222222112222211122222222222222211 


Q ss_pred             -----------HHHHHHhh------hhcCCCHHHHHHHHHHHHHhhhcchhhhHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 039030          299 -----------SGFVLDEA------EKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSV  361 (523)
Q Consensus       299 -----------~~~~l~~~------~~~~ls~ee~~~~~l~~~~~~~~~~~~~~l~~~l~~L~~~~P~~~~kl~~Ei~~~  361 (523)
                                 ...+++..      ...+++++|+.++++.++ +++++|++++++|++++|++| |++|+++++||+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ei~~~~l~l~-~Ag~~tta~~l~~~l~~L~~~-Pe~~~klr~Ei~~~  311 (472)
T d1tqna_         234 LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFI-FAGYETTSSVLSFIMYELATH-PDVQQKLQEEIDAV  311 (472)
T ss_dssp             TTTCSCCCCCHHHHHHHHHCC----CCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred             cccccccccchhhhhhhcccccccccccchhhhHHHhhhhhhh-hcccccccccceeeccccccC-ccccccccceehee
Confidence                       11122211      245789999999987776 889999999999999999998 99999999999999


Q ss_pred             HhcCCCccChhhhcCChhHHHHHHHhhcCCCCcccccccccCCeEecccCCceEecCCCEEEeeccccccCCcccCCCCC
Q 039030          362 VRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEE  441 (523)
Q Consensus       362 ~~~~~~~~t~~~l~~lp~l~a~i~EtLRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~d~~~~~dp~~  441 (523)
                      ++.+. ..+.+++.+||||+|||+|+||++|+++...|++.+|+.++    ||.||||+.|+++.+.+|+||++|+||++
T Consensus       312 ~~~~~-~~~~~~l~~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~----g~~ipkGt~v~~~~~~~~~d~~~~~dp~~  386 (472)
T d1tqna_         312 LPNKA-PPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEIN----GMFIPKGVVVMIPSYALHRDPKYWTEPEK  386 (472)
T ss_dssp             STTTC-CCCHHHHHHCHHHHHHHHHHHHHCCTTCCEEEECCSCEEET----TEEECTTCEEEECHHHHHTCTTTSSSTTS
T ss_pred             ccccc-cchHHHhhccccccceeeeccccCCcccccccccccCcccc----CceeCCCCEEEEechhhhcCchhCCCccc
Confidence            87654 68889999999999999999999999998889999999998    99999999999999999999999999999


Q ss_pred             cccCcccCccc---cccceeecCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceeecccccccccCcee
Q 039030          442 FVADRFVGEGE---KMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVT  514 (523)
Q Consensus       442 F~PeRfl~~~~---~~~~~~~fg~G~~~~~fg~g~r~C~G~~lA~~~~~~~l~~ll~~fd~~~~~~~~~~~~~~~~  514 (523)
                      |+||||++++.   +...|+|||.|+         |+|||++||.+|++++++.||++|||+.+++++.+......
T Consensus       387 F~PeRfl~~~~~~~~~~~~~~FG~G~---------r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~  453 (472)
T d1tqna_         387 FLPERFSKKNKDNIDPYIYTPFGSGP---------RNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLG  453 (472)
T ss_dssp             CCGGGGSTTTGGGCCTTTSCTTCCST---------TSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSS
T ss_pred             cCccccCCCCcccCCCceecCCCCCC---------ccChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCCceeccc
Confidence            99999998632   334577777777         99999999999999999999999999998877665554443
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure