Citrus Sinensis ID: 039074

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccCEEEECcccccccccCEEEECcccEEEEEcccccEEEEccccccccccccccEECccEEEEccccEEEcccccEEEccccccccccccccccccCEEEEEccEEEEEcccccccccccccccccccccccEEEEEEEEECccHHHHHHHcccccccccccccccccccccccccccEEEEECcccEEEEEEccccccccccEEEEEccCEEEEEEEECccccccccEEEEEEEEECcccccCEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccc
**********SPLLKI**********************************************************ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSA***AKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHR**
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SSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein TIC 55, chloroplastic Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.confidentQ9SK50
Protein TIC 55, chloroplastic Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.probableO49931

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Z01, chain A
Confidence level:very confident
Coverage over the Query: 57-403
View the alignment between query and template
View the model in PyMOL