Citrus Sinensis ID: 039074
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 534 | 2.2.26 [Sep-21-2011] | |||||||
| O49931 | 553 | Protein TIC 55, chloropla | N/A | no | 0.955 | 0.922 | 0.804 | 0.0 | |
| Q9SK50 | 539 | Protein TIC 55, chloropla | yes | no | 0.900 | 0.892 | 0.790 | 0.0 | |
| Q9FYC2 | 537 | Pheophorbide a oxygenase, | no | no | 0.795 | 0.791 | 0.280 | 2e-40 | |
| Q8W496 | 559 | Protochlorophyllide-depen | no | no | 0.732 | 0.699 | 0.242 | 6e-37 | |
| Q9ZWM5 | 645 | Chlorophyllide a oxygenas | N/A | no | 0.537 | 0.444 | 0.266 | 7e-28 | |
| Q9XJ38 | 463 | Chlorophyllide a oxygenas | N/A | no | 0.593 | 0.684 | 0.256 | 4e-24 | |
| Q8S7E1 | 541 | Chlorophyllide a oxygenas | no | no | 0.552 | 0.545 | 0.270 | 3e-22 | |
| Q9MBA1 | 536 | Chlorophyllide a oxygenas | no | no | 0.642 | 0.639 | 0.255 | 2e-20 | |
| Q9AHG3 | 346 | Putative toluene-4-sulfon | no | no | 0.357 | 0.552 | 0.309 | 5e-19 | |
| O05616 | 354 | Vanillate O-demethylase o | N/A | no | 0.290 | 0.437 | 0.312 | 1e-17 |
| >sp|O49931|TIC55_PEA Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1 | Back alignment and function desciption |
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Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/522 (80%), Positives = 458/522 (87%), Gaps = 12/522 (2%)
Query: 22 TPPTTNVIISLNKTPKSRK-----CHAVTDRSSTSTV----GDHKVLVGPASAEERRGER 72
T P++N S NK SR+ C A +T+ D KVLVGP+S +ER+GER
Sbjct: 35 TNPSSN--FSFNKALSSRRRKQAWCVAAAADVKDATLLDGEEDQKVLVGPSSEQERKGER 92
Query: 73 QVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLS 132
+VADYDWTEEWYPLYLTK+VP DAPLGL V+D+ IVL++DGN + +CY+DRCPHRLAKLS
Sbjct: 93 EVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLS 152
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP+SACV+TYEV++SQGV+WVWMS+
Sbjct: 153 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSR 212
Query: 193 KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE 252
KTPPN K+PWFENFARPGFQD+ST HELPYDHSILLENLMDPAH+PISHDRTDW+AKRE
Sbjct: 213 KTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKRE 272
Query: 253 DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG 312
DAQ LGFEVTERTDRGFAG WG+EKD PNFLRFEAPCVLQNNRE+VD K GE ++F+G
Sbjct: 273 DAQALGFEVTERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVD-KNGEINHFSG 331
Query: 313 LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKE 372
LFLCRPTGQGKSMLIVRFGATKRSPL KLFP+WYFHQNASKVFEQDMGFLSSQNE+L+KE
Sbjct: 332 LFLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391
Query: 373 TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAG 432
VPTKELYLNL+SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP+ PAVVEHAPAGLVAG
Sbjct: 392 KVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEEPAVVEHAPAGLVAG 451
Query: 433 VSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAIL 492
+SASSPAKG IGTMHAPNLANRYFRHVIHCKGCSS IKAF WKN LS V AL LAIL
Sbjct: 452 LSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSSAIKAFQIWKNVLSGVVVALAALAIL 511
Query: 493 ASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
SGRQWK LASASLC GVYACSTAIAMNTTNFIR HRRL
Sbjct: 512 VSGRQWKVLLLASASLCSVGVYACSTAIAMNTTNFIRVHRRL 553
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Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Pisum sativum (taxid: 3888) |
| >sp|Q9SK50|TIC55_ARATH Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FYC2|PAO_ARATH Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8W496|PTC52_ARATH Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9ZWM5|CAO_CHLRE Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9XJ38|CAO_DUNSA Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8S7E1|CAO_ORYSJ Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9MBA1|CAO_ARATH Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9AHG3|TSAM2_COMTE Putative toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM2 OS=Comamonas testosteroni GN=tsaM2 PE=5 SV=1 | Back alignment and function description |
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| >sp|O05616|VANA_PSEUH Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp. (strain HR199 / DSM 7063) GN=vanA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 534 | ||||||
| 255548670 | 552 | chlorophyll a oxygenase, putative [Ricin | 0.988 | 0.956 | 0.798 | 0.0 | |
| 75219721 | 553 | RecName: Full=Protein TIC 55, chloroplas | 0.955 | 0.922 | 0.804 | 0.0 | |
| 224143358 | 549 | predicted protein [Populus trichocarpa] | 0.977 | 0.950 | 0.787 | 0.0 | |
| 356507174 | 532 | PREDICTED: pheophorbide a oxygenase, chl | 0.911 | 0.915 | 0.833 | 0.0 | |
| 359475902 | 544 | PREDICTED: protein TIC 55, chloroplastic | 0.998 | 0.979 | 0.768 | 0.0 | |
| 357465983 | 552 | Rieske iron-sulfur protein Tic55 [Medica | 0.994 | 0.961 | 0.776 | 0.0 | |
| 224092649 | 556 | predicted protein [Populus trichocarpa] | 0.983 | 0.944 | 0.761 | 0.0 | |
| 356514868 | 540 | PREDICTED: pheophorbide a oxygenase, chl | 0.889 | 0.879 | 0.841 | 0.0 | |
| 15224625 | 539 | translocon at the inner envelope membran | 0.900 | 0.892 | 0.790 | 0.0 | |
| 449455677 | 542 | PREDICTED: protein TIC 55, chloroplastic | 0.934 | 0.920 | 0.743 | 0.0 |
| >gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis] gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/537 (79%), Positives = 464/537 (86%), Gaps = 9/537 (1%)
Query: 6 RSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSR--KCHAVTD------RSSTSTVGDHK 57
+S SPL P T+++ + T K R KC+A + RS DH
Sbjct: 17 KSFPLSPLSSTSKPTTPTIKTHLLKPILHTLKIRHTKCYAASSTVHDESRSGVVEADDHM 76
Query: 58 VLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL 117
VLVGP+S EERRGER VADYDWTEEWYPLYLTKDVPDDAPLGLTVFD+QIVLYKDG GEL
Sbjct: 77 VLVGPSSEEERRGERVVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGEL 136
Query: 118 RCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTY 177
RCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP +AKIP+SACV+TY
Sbjct: 137 RCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPTNAKIPQSACVKTY 196
Query: 178 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
E++ESQGVVWVWMS+KTPPN +KLPWFENFARPGFQD ST HELPYDHSILLENLMDPAH
Sbjct: 197 EIRESQGVVWVWMSRKTPPNLNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAH 256
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
IPISHDRTDW+AKREDAQ L F+VTERTDRGFAG WG++KD L NFLRFEAPCVLQNNR
Sbjct: 257 IPISHDRTDWSAKREDAQALRFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNR 316
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
++VD + G KHYFTGLFLCRPTGQGK+MLIVRFG TKRS +AK P+WYFHQNASKVFEQ
Sbjct: 317 DIVD-ENGVKHYFTGLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIPQWYFHQNASKVFEQ 375
Query: 358 DMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPK 417
DMGFLSSQNEVLMKE VPTK LYLNL+SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP+
Sbjct: 376 DMGFLSSQNEVLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPE 435
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKN 477
VPAVVEHAPAGLVAGVSASSPAKG IGTMHAPNL+NRYFRHVIHC+ CSSV+K F WKN
Sbjct: 436 VPAVVEHAPAGLVAGVSASSPAKGGIGTMHAPNLSNRYFRHVIHCRKCSSVVKGFEAWKN 495
Query: 478 SLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
+LS +A T LAILASGRQWK F L SA LCLAGVYAC+TAIAMNTTNFIRTHRRL
Sbjct: 496 ALSAIALVSTALAILASGRQWKPFLLLSAGLCLAGVYACTTAIAMNTTNFIRTHRRL 552
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske iron-sulfur protein TIC55; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55; Short=PsTIC55; Flags: Precursor gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum] | Back alignment and taxonomy information |
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| >gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa] gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera] gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula] gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa] gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II [Arabidopsis thaliana] gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55-II; Flags: Precursor gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana] gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus] gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 534 | ||||||
| TAIR|locus:2047329 | 539 | TIC55-II "translocon at the in | 0.900 | 0.892 | 0.757 | 4.6e-208 | |
| TAIR|locus:2082122 | 537 | ACD1 "ACCELERATED CELL DEATH 1 | 0.661 | 0.657 | 0.300 | 3.3e-47 | |
| TAIR|locus:2131406 | 559 | ACD1-LIKE "AT4G25650" [Arabido | 0.404 | 0.386 | 0.331 | 1.7e-35 | |
| TAIR|locus:2823671 | 536 | CH1 "CHLORINA 1" [Arabidopsis | 0.646 | 0.643 | 0.256 | 3.5e-23 | |
| UNIPROTKB|Q48IV9 | 354 | vanA "Vanillate monooxygenase, | 0.318 | 0.480 | 0.28 | 2e-15 | |
| UNIPROTKB|Q4KB09 | 352 | vanA "Vanillate O-demethylase, | 0.307 | 0.465 | 0.290 | 7.5e-13 | |
| UNIPROTKB|Q8G8B6 | 384 | carAa "Carbazole 1,9a-dioxygen | 0.337 | 0.468 | 0.285 | 4.9e-12 | |
| UNIPROTKB|D5IGG0 | 378 | carAa "Carbazole 1,9a-dioxygen | 0.353 | 0.5 | 0.287 | 1.3e-11 | |
| ZFIN|ZDB-GENE-040718-356 | 460 | zgc:92275 "zgc:92275" [Danio r | 0.397 | 0.460 | 0.28 | 4.7e-11 | |
| UNIPROTKB|P71875 | 386 | kshA "3-ketosteroid-9-alpha-mo | 0.294 | 0.406 | 0.262 | 8.6e-11 |
| TAIR|locus:2047329 TIC55-II "translocon at the inner envelope membrane of chloroplasts 55-II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2012 (713.3 bits), Expect = 4.6e-208, P = 4.6e-208
Identities = 369/487 (75%), Positives = 405/487 (83%)
Query: 49 STSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIV 108
S T G VL+ P EE+R E VADYDWTEEWYPLYLTK+VP+DAPLGLTV+D+QIV
Sbjct: 58 SDQTEGGGDVLLNPE--EEKRVE--VADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIV 113
Query: 109 LYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKI 168
LYKDG G LRCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA AKI
Sbjct: 114 LYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKI 173
Query: 169 PRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL 228
P++ACV+TYEVK+SQGVVWVWMS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSIL
Sbjct: 174 PKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSIL 233
Query: 229 LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL-PNFLRF 287
LENLMDPAH+PISHDRTD+TAKREDAQPL FEVTER++RGFAG WG+EK+ N LRF
Sbjct: 234 LENLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRF 293
Query: 288 EAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYF 347
+APCVLQNNRE + K G K+YF+GLFLCRPTGQGKSMLIVRFG TKRSPL + P+W++
Sbjct: 294 DAPCVLQNNREF-EGKDGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFW 352
Query: 348 HQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYH 407
HQNA KVFEQDMGFLSSQNEVLMKE VPTK+LYLNL+SSDTWVAEYRKWMDKVGHGMPYH
Sbjct: 353 HQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYH 412
Query: 408 FGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSS 467
FGH TISLPKVP VVEHAPAGL+A +SAS PAKG IGTMHAPNLANRYFRH+IHC+ CS+
Sbjct: 413 FGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSN 472
Query: 468 VIKAFSTWKNXXXXXXXXXXXXXXXXXGRQWKAFXXXXXXXXXXGVYACSTAIAMNTTNF 527
VIK+F WKN RQWKA Y C AI +NT NF
Sbjct: 473 VIKSFELWKNILSATAVALTALAILVVSRQWKAVLLGSAALCSAAAYTCLRAINLNTNNF 532
Query: 528 IRTHRRL 534
IRTHRRL
Sbjct: 533 IRTHRRL 539
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| TAIR|locus:2082122 ACD1 "ACCELERATED CELL DEATH 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2131406 ACD1-LIKE "AT4G25650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2823671 CH1 "CHLORINA 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q48IV9 vanA "Vanillate monooxygenase, oxygenase subunit" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q4KB09 vanA "Vanillate O-demethylase, oxygenase subunit" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8G8B6 carAa "Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa" [Pseudomonas resinovorans (taxid:53412)] | Back alignment and assigned GO terms |
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| UNIPROTKB|D5IGG0 carAa "Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa" [Sphingomonas sp. (taxid:28214)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040718-356 zgc:92275 "zgc:92275" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P71875 kshA "3-ketosteroid-9-alpha-monooxygenase oxygenase subunit" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SK50 | TIC55_ARATH | No assigned EC number | 0.7905 | 0.9007 | 0.8923 | yes | no |
| O49931 | TIC55_PEA | No assigned EC number | 0.8045 | 0.9550 | 0.9222 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.XVIII.1983.1 | hypothetical protein (476 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 534 | |||
| cd04338 | 134 | cd04338, Rieske_RO_Alpha_Tic55, Tic55 is a 55kDa L | 4e-88 | |
| PLN02518 | 539 | PLN02518, PLN02518, pheophorbide a oxygenase | 2e-54 | |
| cd03480 | 138 | cd03480, Rieske_RO_Alpha_PaO, Rieske non-heme iron | 5e-38 | |
| COG4638 | 367 | COG4638, HcaE, Phenylpropionate dioxygenase and re | 4e-37 | |
| cd03469 | 118 | cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron o | 8e-33 | |
| cd03532 | 116 | cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-hem | 7e-29 | |
| pfam08417 | 91 | pfam08417, PaO, Pheophorbide a oxygenase | 1e-28 | |
| PLN02281 | 536 | PLN02281, PLN02281, chlorophyllide a oxygenase | 6e-27 | |
| cd04337 | 129 | cd04337, Rieske_RO_Alpha_Cao, Cao (chlorophyll a o | 1e-26 | |
| cd03479 | 144 | cd03479, Rieske_RO_Alpha_PhDO_like, Rieske non-hem | 2e-25 | |
| pfam00355 | 99 | pfam00355, Rieske, Rieske [2Fe-2S] domain | 3e-20 | |
| PLN00095 | 394 | PLN00095, PLN00095, chlorophyllide a oxygenase; Pr | 3e-19 | |
| cd03467 | 98 | cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster | 5e-19 | |
| cd03537 | 123 | cd03537, Rieske_RO_Alpha_PrnD, This alignment mode | 1e-16 | |
| cd03548 | 136 | cd03548, Rieske_RO_Alpha_OMO_CARDO, Rieske non-hem | 1e-16 | |
| cd03531 | 115 | cd03531, Rieske_RO_Alpha_KSH, The alignment model | 5e-16 | |
| COG2146 | 106 | COG2146, {NirD}, Ferredoxin subunits of nitrite re | 4e-15 | |
| cd03528 | 98 | cd03528, Rieske_RO_ferredoxin, Rieske non-heme iro | 5e-13 | |
| cd03474 | 108 | cd03474, Rieske_T4moC, Toluene-4-monooxygenase eff | 9e-10 | |
| cd03478 | 95 | cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing f | 4e-09 | |
| TIGR02378 | 105 | TIGR02378, nirD_assim_sml, nitrite reductase [NAD( | 2e-08 | |
| cd03530 | 98 | cd03530, Rieske_NirD_small_Bacillus, Small subunit | 5e-08 | |
| cd08878 | 196 | cd08878, RHO_alpha_C_DMO-like, C-terminal catalyti | 2e-06 | |
| cd03538 | 146 | cd03538, Rieske_RO_Alpha_AntDO, Rieske non-heme ir | 3e-05 | |
| cd03541 | 118 | cd03541, Rieske_RO_Alpha_CMO, Rieske non-heme iron | 1e-04 | |
| TIGR03229 | 433 | TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenas | 2e-04 | |
| cd03545 | 150 | cd03545, Rieske_RO_Alpha_OHBDO_like, Rieske non-he | 5e-04 | |
| PRK09965 | 106 | PRK09965, PRK09965, 3-phenylpropionate dioxygenase | 6e-04 | |
| cd03542 | 123 | cd03542, Rieske_RO_Alpha_HBDO, Rieske non-heme iro | 8e-04 | |
| cd03535 | 123 | cd03535, Rieske_RO_Alpha_NDO, Rieske non-heme iron | 8e-04 | |
| TIGR03228 | 438 | TIGR03228, anthran_1_2_A, anthranilate 1,2-dioxyge | 0.003 |
| >gnl|CDD|239830 cd04338, Rieske_RO_Alpha_Tic55, Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane | Back alignment and domain information |
|---|
Score = 267 bits (683), Expect = 4e-88
Identities = 98/132 (74%), Positives = 116/132 (87%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPH 126
E VA+YDW EEWYPLYL KDVP DAPLGL+V+D+ VL++D NG+LRC +DRCPH
Sbjct: 2 EFETPENVAEYDWREEWYPLYLLKDVPTDAPLGLSVYDEPFVLFRDQNGQLRCLEDRCPH 61
Query: 127 RLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 186
RLAKLSEGQLIDG+LECLYHGWQF GEGKCVKIPQLPADAKIP++ACV++YEV++SQGVV
Sbjct: 62 RLAKLSEGQLIDGKLECLYHGWQFGGEGKCVKIPQLPADAKIPKNACVKSYEVRDSQGVV 121
Query: 187 WVWMSQKTPPNP 198
W+WMS+ TPP+
Sbjct: 122 WMWMSEATPPDE 133
|
This domain represents the N-terminal Rieske domain of the Tic55 oxygenase alpha subunit. Tic55 is closely related to the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO), Ptc52, and ACD1 (accelerated cell death 1). ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Length = 134 |
| >gnl|CDD|215283 PLN02518, PLN02518, pheophorbide a oxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|239562 cd03480, Rieske_RO_Alpha_PaO, Rieske non-heme iron oxygenase (RO) family, Pheophorbide a oxygenase (PaO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO) and ACD1 (accelerated cell death 1) | Back alignment and domain information |
|---|
| >gnl|CDD|226985 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|239551 cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms | Back alignment and domain information |
|---|
| >gnl|CDD|239608 cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|219832 pfam08417, PaO, Pheophorbide a oxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|177920 PLN02281, PLN02281, chlorophyllide a oxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|239829 cd04337, Rieske_RO_Alpha_Cao, Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b | Back alignment and domain information |
|---|
| >gnl|CDD|239561 cd03479, Rieske_RO_Alpha_PhDO_like, Rieske non-heme iron oxygenase (RO) family, Phthalate 4,5-dioxygenase (PhDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of PhDO and similar proteins including 3-chlorobenzoate 3,4-dioxygenase (CBDO), phenoxybenzoate dioxygenase (POB-dioxygenase) and 3-nitrobenzoate oxygenase (MnbA) | Back alignment and domain information |
|---|
| >gnl|CDD|215875 pfam00355, Rieske, Rieske [2Fe-2S] domain | Back alignment and domain information |
|---|
| >gnl|CDD|165668 PLN00095, PLN00095, chlorophyllide a oxygenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239550 cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes | Back alignment and domain information |
|---|
| >gnl|CDD|239611 cd03537, Rieske_RO_Alpha_PrnD, This alignment model represents the N-terminal rieske domain of the oxygenase alpha subunit of aminopyrrolnitrin oxygenase (PrnD) | Back alignment and domain information |
|---|
| >gnl|CDD|239617 cd03548, Rieske_RO_Alpha_OMO_CARDO, Rieske non-heme iron oxygenase (RO) family, 2-Oxoquinoline 8-monooxygenase (OMO) and Carbazole 1,9a-dioxygenase (CARDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|239607 cd03531, Rieske_RO_Alpha_KSH, The alignment model represents the N-terminal rieske iron-sulfur domain of KshA, the oxygenase component of 3-ketosteroid 9-alpha-hydroxylase (KSH) | Back alignment and domain information |
|---|
| >gnl|CDD|225057 COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|239604 cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO) | Back alignment and domain information |
|---|
| >gnl|CDD|239556 cd03474, Rieske_T4moC, Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >gnl|CDD|239560 cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox) | Back alignment and domain information |
|---|
| >gnl|CDD|131431 TIGR02378, nirD_assim_sml, nitrite reductase [NAD(P)H], small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239606 cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain | Back alignment and domain information |
|---|
| >gnl|CDD|176887 cd08878, RHO_alpha_C_DMO-like, C-terminal catalytic domain of the oxygenase alpha subunit of dicamba O-demethylase and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >gnl|CDD|239612 cd03538, Rieske_RO_Alpha_AntDO, Rieske non-heme iron oxygenase (RO) family, Anthranilate 1,2-dioxygenase (AntDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|239614 cd03541, Rieske_RO_Alpha_CMO, Rieske non-heme iron oxygenase (RO) family, Choline monooxygenase (CMO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|132273 TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239616 cd03545, Rieske_RO_Alpha_OHBDO_like, Rieske non-heme iron oxygenase (RO) family, Ortho-halobenzoate-1,2-dioxygenase (OHBDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of OHBDO, salicylate 5-hydroxylase (S5H), terephthalate 1,2-dioxygenase system (TERDOS) and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|170182 PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239615 cd03542, Rieske_RO_Alpha_HBDO, Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|239609 cd03535, Rieske_RO_Alpha_NDO, Rieske non-heme iron oxygenase (RO) family, Nathphalene 1,2-dioxygenase (NDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|132272 TIGR03228, anthran_1_2_A, anthranilate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 534 | |||
| PLN02518 | 539 | pheophorbide a oxygenase | 100.0 | |
| PLN02281 | 536 | chlorophyllide a oxygenase | 100.0 | |
| PLN00095 | 394 | chlorophyllide a oxygenase; Provisional | 100.0 | |
| COG4638 | 367 | HcaE Phenylpropionate dioxygenase and related ring | 100.0 | |
| TIGR03229 | 433 | benzo_1_2_benA benzoate 1,2-dioxygenase, large sub | 100.0 | |
| TIGR03228 | 438 | anthran_1_2_A anthranilate 1,2-dioxygenase, large | 100.0 | |
| cd04338 | 134 | Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-relate | 100.0 | |
| cd03537 | 123 | Rieske_RO_Alpha_PrnD This alignment model represen | 99.97 | |
| cd03480 | 138 | Rieske_RO_Alpha_PaO Rieske non-heme iron oxygenase | 99.97 | |
| cd03545 | 150 | Rieske_RO_Alpha_OHBDO_like Rieske non-heme iron ox | 99.97 | |
| cd04337 | 129 | Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) | 99.96 | |
| cd03479 | 144 | Rieske_RO_Alpha_PhDO_like Rieske non-heme iron oxy | 99.96 | |
| cd03531 | 115 | Rieske_RO_Alpha_KSH The alignment model represents | 99.96 | |
| cd03548 | 136 | Rieske_RO_Alpha_OMO_CARDO Rieske non-heme iron oxy | 99.96 | |
| cd03532 | 116 | Rieske_RO_Alpha_VanA_DdmC Rieske non-heme iron oxy | 99.96 | |
| cd03538 | 146 | Rieske_RO_Alpha_AntDO Rieske non-heme iron oxygena | 99.95 | |
| cd03541 | 118 | Rieske_RO_Alpha_CMO Rieske non-heme iron oxygenase | 99.95 | |
| cd03472 | 128 | Rieske_RO_Alpha_BPDO_like Rieske non-heme iron oxy | 99.95 | |
| cd03539 | 129 | Rieske_RO_Alpha_S5H This alignment model represent | 99.94 | |
| cd03469 | 118 | Rieske_RO_Alpha_N Rieske non-heme iron oxygenase ( | 99.94 | |
| cd03535 | 123 | Rieske_RO_Alpha_NDO Rieske non-heme iron oxygenase | 99.93 | |
| cd03536 | 123 | Rieske_RO_Alpha_DTDO This alignment model represen | 99.93 | |
| cd03530 | 98 | Rieske_NirD_small_Bacillus Small subunit of nitrit | 99.92 | |
| cd03528 | 98 | Rieske_RO_ferredoxin Rieske non-heme iron oxygenas | 99.91 | |
| cd03474 | 108 | Rieske_T4moC Toluene-4-monooxygenase effector prot | 99.91 | |
| cd03542 | 123 | Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenas | 99.91 | |
| cd03529 | 103 | Rieske_NirD Assimilatory nitrite reductase (NirD) | 99.9 | |
| TIGR02377 | 101 | MocE_fam_FeS Rieske [2Fe-2S] domain protein, MocE | 99.9 | |
| TIGR02378 | 105 | nirD_assim_sml nitrite reductase [NAD(P)H], small | 99.9 | |
| PRK09965 | 106 | 3-phenylpropionate dioxygenase ferredoxin subunit; | 99.89 | |
| cd03478 | 95 | Rieske_AIFL_N AIFL (apoptosis-inducing factor like | 99.88 | |
| PF13806 | 104 | Rieske_2: Rieske-like [2Fe-2S] domain; PDB: 2JO6_A | 99.87 | |
| PRK09511 | 108 | nirD nitrite reductase small subunit; Provisional | 99.85 | |
| PF00355 | 97 | Rieske: Rieske [2Fe-2S] domain; InterPro: IPR01794 | 99.84 | |
| cd03467 | 98 | Rieske Rieske domain; a [2Fe-2S] cluster binding d | 99.83 | |
| COG2146 | 106 | {NirD} Ferredoxin subunits of nitrite reductase an | 99.83 | |
| cd03477 | 91 | Rieske_YhfW_C YhfW family, C-terminal Rieske domai | 99.8 | |
| cd08878 | 196 | RHO_alpha_C_DMO-like C-terminal catalytic domain o | 99.78 | |
| cd03476 | 126 | Rieske_ArOX_small Small subunit of Arsenite oxidas | 99.74 | |
| cd03471 | 126 | Rieske_cytochrome_b6f Iron-sulfur protein (ISP) co | 99.68 | |
| cd03473 | 107 | Rieske_CMP_Neu5Ac_hydrolase_N Cytidine monophospha | 99.66 | |
| PF08417 | 92 | PaO: Pheophorbide a oxygenase; InterPro: IPR013626 | 99.65 | |
| TIGR02694 | 129 | arsenite_ox_S arsenite oxidase, small subunit. Thi | 99.64 | |
| cd03470 | 126 | Rieske_cytochrome_bc1 Iron-sulfur protein (ISP) co | 99.56 | |
| cd00680 | 188 | RHO_alpha_C C-terminal catalytic domain of the oxy | 99.53 | |
| PRK13474 | 178 | cytochrome b6-f complex iron-sulfur subunit; Provi | 99.44 | |
| cd08885 | 190 | RHO_alpha_C_1 C-terminal catalytic domain of the o | 99.31 | |
| TIGR01416 | 174 | Rieske_proteo ubiquinol-cytochrome c reductase, ir | 99.25 | |
| cd08883 | 175 | RHO_alpha_C_CMO-like C-terminal catalytic domain o | 99.25 | |
| cd08886 | 182 | RHO_alpha_C_2 C-terminal catalytic domain of the o | 99.22 | |
| cd08887 | 185 | RHO_alpha_C_3 C-terminal catalytic domain of the o | 99.22 | |
| PF00848 | 209 | Ring_hydroxyl_A: Ring hydroxylating alpha subunit | 99.15 | |
| cd08884 | 205 | RHO_alpha_C_GbcA-like C-terminal catalytic domain | 99.14 | |
| cd03475 | 171 | Rieske_SoxF_SoxL SoxF and SoxL family, Rieske doma | 98.84 | |
| PF11723 | 240 | Aromatic_hydrox: Homotrimeric ring hydroxylase; In | 98.52 | |
| cd08880 | 222 | RHO_alpha_C_ahdA1c-like C-terminal catalytic domai | 98.48 | |
| cd08882 | 243 | RHO_alpha_C_MupW-like C-terminal catalytic domain | 98.45 | |
| COG0723 | 177 | QcrA Rieske Fe-S protein [Energy production and co | 98.32 | |
| cd08881 | 206 | RHO_alpha_C_NDO-like C-terminal catalytic domain o | 98.06 | |
| cd08879 | 237 | RHO_alpha_C_AntDO-like C-terminal catalytic domain | 97.95 | |
| KOG1671 | 210 | consensus Ubiquinol cytochrome c reductase, subuni | 97.93 | |
| TIGR03171 | 321 | soxL2 Rieske iron-sulfur protein SoxL2. This iron- | 97.62 | |
| KOG1336 | 478 | consensus Monodehydroascorbate/ferredoxin reductas | 95.52 |
| >PLN02518 pheophorbide a oxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-89 Score=735.91 Aligned_cols=422 Identities=30% Similarity=0.582 Sum_probs=346.2
Q ss_pred cccccccccccCcEEeeecCCCCCCCcEEEEEcCEEEEEEEe-cCCcEEEEeCCCCCCCCccccCccc-ccEEEccCCCe
Q 039074 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQLI-DGRLECLYHGW 148 (534)
Q Consensus 71 ~~~e~~~~~~~~W~~v~~~~dl~~~~~~~~~l~g~~lvv~r~-~~G~~~a~~d~CpHRga~Ls~G~i~-~~~l~CpyHGW 148 (534)
...+.+|+|+++||+|+.++||++++++.++++|++|||||+ .+|+++||+|+||||+++||+|+++ ++.|+||||||
T Consensus 79 ~~~~~~f~~~~~Wy~Va~~~dL~~g~p~~~~llG~~lVl~Rd~~~G~~~A~~d~CPHRgapLS~G~v~~~g~L~CpYHGW 158 (539)
T PLN02518 79 ESSDSKFSWRDHWYPVSLVEDLDPSVPTPFQLLGRDLVLWKDPNQGEWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGW 158 (539)
T ss_pred cccchhhhhhhhCEEEEEHHHCCCCCeEEEEECCEEEEEEEECCCCeEEEEcccCcCcCCCcccceecCCCEEEcCCCCC
Confidence 445678999999999999999988889999999999999999 8999999999999999999999996 78999999999
Q ss_pred EEecCCceeecCCCCCCC-----CCCccCccceEEEEEecCeEEEEcCCCC--CCCCCCCCccc-cccCCCceeeeeEEE
Q 039074 149 QFEGEGKCVKIPQLPADA-----KIPRSACVRTYEVKESQGVVWVWMSQKT--PPNPDKLPWFE-NFARPGFQDVSTIHE 220 (534)
Q Consensus 149 ~Fd~~G~c~~iP~~~~~~-----~~~~~~~l~~~pv~~~~G~Vwv~~~~~~--~~~~~~lP~~~-~~~~~~~~~~~~~~~ 220 (534)
+||++|+|+.||+.+... .+++++|+++|||+|++|+||||+++++ .++...+|.++ ++++++|......++
T Consensus 159 ~Fd~~G~c~~IP~~~~~~~~~~~~~~~~a~v~sypv~e~~GlIwV~~~~~~~~~a~~~~~P~~~~~~~~~~~~~~~~~~~ 238 (539)
T PLN02518 159 SFDGCGSCTRIPQAAPEGPEARAVKSPRACAIKFPTMVSQGLLFVWPDENGWERAQATKPPMLPDEFDDPEFSTVTIQRD 238 (539)
T ss_pred EEcCCCCeeecccccccccccccccCcccccceEeEEEECCEEEEEeCCccccccccccCCCCcccccCCCceeEEEEEE
Confidence 999999999999865332 2456789999999999999999998652 23456778774 788889987777889
Q ss_pred eecChhhhcccCCCCccCccccCCcccccccccCCCceEEEEeeccCccccccCCCCCCCCCeEEEEecCeeeecceeee
Q 039074 221 LPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV 300 (534)
Q Consensus 221 ~~~~~~~~~EN~lD~~H~~~~H~~~~~~~~r~~~~p~~~~v~~~~~~gf~~~~~~~~~~~~~~~~~F~~P~~~~~~~~~~ 300 (534)
++|+|++++||++|++|++|+|++++ ++++++.+..++++..+..||.+.+. .+.....+|.+||++.+.+...
T Consensus 239 ~~~~~~~l~EN~lD~sH~pfvH~~~~--G~~~~~~~~~~~v~~~~~~Gf~g~~~----~~~~~~~~F~~P~~~~~~~~~~ 312 (539)
T PLN02518 239 LFYGYDTLMENVSDPSHIDFAHHKVT--GRRDRAKPLPFKVESSGPWGFAGANS----DNPRITAKFVAPCYYINKIEID 312 (539)
T ss_pred EecCchhHHHhCCccchhceeccccc--cCccccccccceEEEcCCCccccccc----CCCceEEEEECCeEEEEeeeee
Confidence 99999999999999999999999986 56677777778887766667765332 2334568899999987765442
Q ss_pred cC--CCCce-eEEEEEEEeeeCCCCeEEEEEEEecCCCC------cccccchhhhhhhhhhhhHHhHHHHHHHHHHhhhh
Q 039074 301 DS--KTGEK-HYFTGLFLCRPTGQGKSMLIVRFGATKRS------PLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371 (534)
Q Consensus 301 ~~--~~G~~-~~~~~v~~~~Pv~pg~trl~~~~~~~~~~------~~~~~~p~w~~h~~~~~Vl~eD~~iL~~Qe~~l~~ 371 (534)
.. ..|.. ..+..+++++|+++|+||+|+++.+++.. .+.+++|+|+.|..+++|||||+.+||.||+.++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~tP~s~g~tr~f~~~~Rnf~~~~~~~~~~~k~~PrW~~h~~~n~Vl~~D~~~lh~Qe~~~~~ 392 (539)
T PLN02518 313 TKLPIVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPAWWQLVPRWYEHWTSNKVYDGDMIVLQGQEKIFLS 392 (539)
T ss_pred ccccCCCCcceEEEEEEEEEECCCCeEEEEEEecccchhccccchhhhhcCchHHHHhhhccchHhHHHHHHHHHHHHhh
Confidence 10 01211 22345678899999999999988877631 13389999999999999999999999999999877
Q ss_pred cCC---------CccccccccCcCcHHHHHHHHHHHHhCCCCCCCCCCcC--CCCCCCccccccCCCcccccccCCCCCC
Q 039074 372 ETV---------PTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHST--ISLPKVPAVVEHAPAGLVAGVSASSPAK 440 (534)
Q Consensus 372 ~~~---------~~k~~y~~~~~aD~~ViafRrWl~~~~~g~P~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~p~~ 440 (534)
.+. +.|.+|+ |++||++|++|||||+++|+|+|.|+|..+ ..+|+.
T Consensus 393 ~~~e~~~~v~~~w~k~~~~-Pt~aD~~viayR~Wl~~~g~g~~~w~~~~~~~~~lp~~---------------------- 449 (539)
T PLN02518 393 KSGEGSADVNAQYTKLTFT-PTQADRFVLAFRNWLRRHGNSQPEWFGETSSQQPLPST---------------------- 449 (539)
T ss_pred ccccccccchhhhhhhccC-CCchhHHHHHHHHHHHHhCcCCCCcccCCcccCCCCCC----------------------
Confidence 543 2355555 589999999999999999998888876432 112221
Q ss_pred CcCCCCCcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHH
Q 039074 441 GAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAI 520 (534)
Q Consensus 441 ~~~~~~~~~~lldRy~~Ht~~C~sC~~Al~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~ 520 (534)
.++++||||||||||+||+||++|||+|+++|+++++++++++++++++...++++++++++++++++.|.+.+
T Consensus 450 ----~~~~~~lldRy~~Ht~~C~SC~~Alk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 523 (539)
T PLN02518 450 ----VLSKRQMLDRFEQHTLNCSSCKGAYKAFQTLQKVLIGATVVFAATAGIPSDVQLRLILAGLALISAASAYALKE-- 523 (539)
T ss_pred ----CCCHHHHhHHHHhhCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH--
Confidence 24689999999999999999999999999999999999999999888888888888888887777777777555
Q ss_pred HHhhccccc
Q 039074 521 AMNTTNFIR 529 (534)
Q Consensus 521 ~~~~~~~~~ 529 (534)
+++||++
T Consensus 524 --~~~~f~~ 530 (539)
T PLN02518 524 --LEKNFVF 530 (539)
T ss_pred --HHhhcee
Confidence 8888876
|
|
| >PLN02281 chlorophyllide a oxygenase | Back alignment and domain information |
|---|
| >PLN00095 chlorophyllide a oxygenase; Provisional | Back alignment and domain information |
|---|
| >COG4638 HcaE Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03229 benzo_1_2_benA benzoate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
| >TIGR03228 anthran_1_2_A anthranilate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
| >cd04338 Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane | Back alignment and domain information |
|---|
| >cd03537 Rieske_RO_Alpha_PrnD This alignment model represents the N-terminal rieske domain of the oxygenase alpha subunit of aminopyrrolnitrin oxygenase (PrnD) | Back alignment and domain information |
|---|
| >cd03480 Rieske_RO_Alpha_PaO Rieske non-heme iron oxygenase (RO) family, Pheophorbide a oxygenase (PaO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO) and ACD1 (accelerated cell death 1) | Back alignment and domain information |
|---|
| >cd03545 Rieske_RO_Alpha_OHBDO_like Rieske non-heme iron oxygenase (RO) family, Ortho-halobenzoate-1,2-dioxygenase (OHBDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of OHBDO, salicylate 5-hydroxylase (S5H), terephthalate 1,2-dioxygenase system (TERDOS) and similar proteins | Back alignment and domain information |
|---|
| >cd04337 Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b | Back alignment and domain information |
|---|
| >cd03479 Rieske_RO_Alpha_PhDO_like Rieske non-heme iron oxygenase (RO) family, Phthalate 4,5-dioxygenase (PhDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of PhDO and similar proteins including 3-chlorobenzoate 3,4-dioxygenase (CBDO), phenoxybenzoate dioxygenase (POB-dioxygenase) and 3-nitrobenzoate oxygenase (MnbA) | Back alignment and domain information |
|---|
| >cd03531 Rieske_RO_Alpha_KSH The alignment model represents the N-terminal rieske iron-sulfur domain of KshA, the oxygenase component of 3-ketosteroid 9-alpha-hydroxylase (KSH) | Back alignment and domain information |
|---|
| >cd03548 Rieske_RO_Alpha_OMO_CARDO Rieske non-heme iron oxygenase (RO) family, 2-Oxoquinoline 8-monooxygenase (OMO) and Carbazole 1,9a-dioxygenase (CARDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03532 Rieske_RO_Alpha_VanA_DdmC Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03538 Rieske_RO_Alpha_AntDO Rieske non-heme iron oxygenase (RO) family, Anthranilate 1,2-dioxygenase (AntDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03541 Rieske_RO_Alpha_CMO Rieske non-heme iron oxygenase (RO) family, Choline monooxygenase (CMO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03472 Rieske_RO_Alpha_BPDO_like Rieske non-heme iron oxygenase (RO) family, Biphenyl dioxygenase (BPDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of BPDO and similar proteins including cumene dioxygenase (CumDO), nitrobenzene dioxygenase (NBDO), alkylbenzene dioxygenase (AkbDO) and dibenzofuran 4,4a-dioxygenase (DFDO) | Back alignment and domain information |
|---|
| >cd03539 Rieske_RO_Alpha_S5H This alignment model represents the N-terminal rieske iron-sulfur domain of the oxygenase alpha subunit (NagG) of salicylate 5-hydroxylase (S5H) | Back alignment and domain information |
|---|
| >cd03469 Rieske_RO_Alpha_N Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms | Back alignment and domain information |
|---|
| >cd03535 Rieske_RO_Alpha_NDO Rieske non-heme iron oxygenase (RO) family, Nathphalene 1,2-dioxygenase (NDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03536 Rieske_RO_Alpha_DTDO This alignment model represents the N-terminal rieske domain of the oxygenase alpha subunit (DitA) of diterpenoid dioxygenase (DTDO) | Back alignment and domain information |
|---|
| >cd03530 Rieske_NirD_small_Bacillus Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain | Back alignment and domain information |
|---|
| >cd03528 Rieske_RO_ferredoxin Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO) | Back alignment and domain information |
|---|
| >cd03474 Rieske_T4moC Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >cd03542 Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03529 Rieske_NirD Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium | Back alignment and domain information |
|---|
| >TIGR02377 MocE_fam_FeS Rieske [2Fe-2S] domain protein, MocE subfamily | Back alignment and domain information |
|---|
| >TIGR02378 nirD_assim_sml nitrite reductase [NAD(P)H], small subunit | Back alignment and domain information |
|---|
| >PRK09965 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional | Back alignment and domain information |
|---|
| >cd03478 Rieske_AIFL_N AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox) | Back alignment and domain information |
|---|
| >PF13806 Rieske_2: Rieske-like [2Fe-2S] domain; PDB: 2JO6_A 3C0D_A 3D89_A 2JZA_A | Back alignment and domain information |
|---|
| >PRK09511 nirD nitrite reductase small subunit; Provisional | Back alignment and domain information |
|---|
| >PF00355 Rieske: Rieske [2Fe-2S] domain; InterPro: IPR017941 There are multiple types of iron-sulphur clusters which are grouped into three main categories based on their atomic content: [2Fe-2S], [3Fe-4S], [4Fe-4S] (see PDOC00176 from PROSITEDOC), and other hybrid or mixed metal types | Back alignment and domain information |
|---|
| >cd03467 Rieske Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes | Back alignment and domain information |
|---|
| >COG2146 {NirD} Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >cd03477 Rieske_YhfW_C YhfW family, C-terminal Rieske domain; YhfW is a protein of unknown function with an N-terminal DadA-like (glycine/D-amino acid dehydrogenase) domain and a C-terminal Rieske domain | Back alignment and domain information |
|---|
| >cd08878 RHO_alpha_C_DMO-like C-terminal catalytic domain of the oxygenase alpha subunit of dicamba O-demethylase and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >cd03476 Rieske_ArOX_small Small subunit of Arsenite oxidase (ArOX) family, Rieske domain; ArOX is a molybdenum/iron protein involved in the detoxification of arsenic, oxidizing it to arsenate | Back alignment and domain information |
|---|
| >cd03471 Rieske_cytochrome_b6f Iron-sulfur protein (ISP) component of the b6f complex family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >cd03473 Rieske_CMP_Neu5Ac_hydrolase_N Cytidine monophosphate-N-acetylneuraminic acid (CMP Neu5Ac) hydroxylase family, N-terminal Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >PF08417 PaO: Pheophorbide a oxygenase; InterPro: IPR013626 This domain is found in bacterial and plant proteins to the C terminus of a Rieske 2Fe-2S domain (IPR005806 from INTERPRO) | Back alignment and domain information |
|---|
| >TIGR02694 arsenite_ox_S arsenite oxidase, small subunit | Back alignment and domain information |
|---|
| >cd03470 Rieske_cytochrome_bc1 Iron-sulfur protein (ISP) component of the bc(1) complex family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >cd00680 RHO_alpha_C C-terminal catalytic domain of the oxygenase alpha subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >PRK13474 cytochrome b6-f complex iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
| >cd08885 RHO_alpha_C_1 C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >TIGR01416 Rieske_proteo ubiquinol-cytochrome c reductase, iron-sulfur subunit | Back alignment and domain information |
|---|
| >cd08883 RHO_alpha_C_CMO-like C-terminal catalytic domain of plant choline monooxygenase (CMO) and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >cd08886 RHO_alpha_C_2 C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >cd08887 RHO_alpha_C_3 C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >PF00848 Ring_hydroxyl_A: Ring hydroxylating alpha subunit (catalytic domain); InterPro: IPR015879 Aromatic ring hydroxylating dioxygenases are multicomponent 1,2-dioxygenase complexes that convert closed-ring structures to non-aromatic cis-diols [] | Back alignment and domain information |
|---|
| >cd08884 RHO_alpha_C_GbcA-like C-terminal catalytic domain of GbcA (glycine betaine catabolism A) from Pseudomonas aeruginosa PAO1 and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >cd03475 Rieske_SoxF_SoxL SoxF and SoxL family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >PF11723 Aromatic_hydrox: Homotrimeric ring hydroxylase; InterPro: IPR021028 This entry represents the catalytic domain from a family of homotrimeric enzymes that hydroxylate aromatic compounds, including 2-oxo-1,2-dihydroquinoline 8-monooxygenase from Pseudomonas putida and carbazole 1,9a-dioxygenase from Janthinobacterium | Back alignment and domain information |
|---|
| >cd08880 RHO_alpha_C_ahdA1c-like C-terminal catalytic domain of the large/alpha subunit (ahdA1c) of a ring-hydroxylating dioxygenase from Sphingomonas sp | Back alignment and domain information |
|---|
| >cd08882 RHO_alpha_C_MupW-like C-terminal catalytic domain of Pseudomonas fluorescens MupW and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >COG0723 QcrA Rieske Fe-S protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd08881 RHO_alpha_C_NDO-like C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >cd08879 RHO_alpha_C_AntDO-like C-terminal catalytic domain of the oxygenase alpha subunit of Pseudomonas resinovorans strain CA10 anthranilate 1,2-dioxygenase and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >KOG1671 consensus Ubiquinol cytochrome c reductase, subunit RIP1 [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR03171 soxL2 Rieske iron-sulfur protein SoxL2 | Back alignment and domain information |
|---|
| >KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 534 | ||||
| 3gke_A | 349 | Crystal Structure Of Dicamba Monooxygenase Length = | 4e-24 | ||
| 1ww9_A | 392 | Crystal Structure Of The Terminal Oxygenase Compone | 1e-12 | ||
| 2zyl_A | 386 | Crystal Structure Of 3-Ketosteroid-9-Alpha-Hydroxyl | 1e-12 | ||
| 3gkq_A | 389 | Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase Fr | 2e-11 | ||
| 1z01_A | 446 | 2-Oxoquinoline 8-Monooxygenase Component: Active Si | 6e-10 | ||
| 3gcf_A | 394 | Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase Fr | 8e-10 | ||
| 3vca_A | 412 | Quaternary Ammonium Oxidative Demethylation: X-Ray | 1e-05 |
| >pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase Length = 349 | Back alignment and structure |
|
| >pdb|1WW9|A Chain A, Crystal Structure Of The Terminal Oxygenase Component Of Carbazole 1, 9a-dioxygenase, A Non-heme Iron Oxygenase System Catalyzing The Novel Angular Dioxygenation For Carbazole And Dioxin Length = 392 | Back alignment and structure |
| >pdb|2ZYL|A Chain A, Crystal Structure Of 3-Ketosteroid-9-Alpha-Hydroxylase (Ksha) From M. Tuberculosis Length = 386 | Back alignment and structure |
| >pdb|3GKQ|A Chain A, Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase From Novosphingobium Sp. Ka1 Length = 389 | Back alignment and structure |
| >pdb|1Z01|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION Length = 446 | Back alignment and structure |
| >pdb|3GCF|A Chain A, Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase From Nocardioides Aromaticivorans Ic177 Length = 394 | Back alignment and structure |
| >pdb|3VCA|A Chain A, Quaternary Ammonium Oxidative Demethylation: X-Ray Crystallographic, Resonance Raman And Uv-Visible Spectroscopic Analysis Of A Rieske- Type Demethylase Length = 412 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis} Length = 386 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 1e-77
Identities = 67/348 (19%), Positives = 124/348 (35%), Gaps = 31/348 (8%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQD 122
+ R + + W+ L + KD + P G+ F ++V++ D +G+L+
Sbjct: 6 SGVGVREIDAGALPTRYARGWHCLGVAKDYLEGKPHGVEAFGTKLVVFADSHGDLKVLDG 65
Query: 123 RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKES 182
C H LSEG + + C +H W++ G+G+C +P + PR A R++
Sbjct: 66 YCRHMGGDLSEGTVKGDEVACPFHDWRWGGDGRCKLVPYAR---RTPRMARTRSWTTDVR 122
Query: 183 QGVVWVWM--SQKTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHI 238
G+++VW P ++P A + D + I + +++N+ D AH
Sbjct: 123 SGLLFVWHDHEGNPPDPAVRIPEIPEAASDEWTDWRWNRILIEGSNCRDIIDNVTDMAHF 182
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNR 297
H K + + R G E + + P + N
Sbjct: 183 FYIHFGLPTYFKNVFEGHIASQYLHNVGRPDVDDLGTSYGEAHLDSEASYFGPSFMIN-- 240
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY---FHQNASKV 354
L + K + P Q +L K +++ F + SK
Sbjct: 241 WLHNRYGNYKSESILINCHYPVTQNSFVLQWGVIVEKPKGMSEEMTDKLSRVFTEGVSKG 300
Query: 355 FEQDMGFLSSQ----NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMD 398
F QD+ + N +L++E D V + R+W +
Sbjct: 301 FLQDVEIWKHKTRIDNPLLVEE--------------DGAVYQLRRWYE 334
|
| >3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A* Length = 349 | Back alignment and structure |
|---|
| >3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas} Length = 389 | Back alignment and structure |
|---|
| >2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A* Length = 392 | Back alignment and structure |
|---|
| >3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans} Length = 394 | Back alignment and structure |
|---|
| >1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A* Length = 446 | Back alignment and structure |
|---|
| >1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A Length = 111 | Back alignment and structure |
|---|
| >2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida} Length = 103 | Back alignment and structure |
|---|
| >3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus} Length = 157 | Back alignment and structure |
|---|
| >2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D* Length = 115 | Back alignment and structure |
|---|
| >2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae} Length = 108 | Back alignment and structure |
|---|
| >3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} Length = 106 | Back alignment and structure |
|---|
| >3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans} Length = 121 | Back alignment and structure |
|---|
| >1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B* Length = 112 | Back alignment and structure |
|---|
| >3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3 Length = 119 | Back alignment and structure |
|---|
| >2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3 Length = 113 | Back alignment and structure |
|---|
| >2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3 Length = 130 | Back alignment and structure |
|---|
| >3vca_A Ring-hydroxylating dioxygenase; rieske-type, mononuclear non-heme iron, N-demethylase, oxido; 1.59A {Sinorhizobium meliloti} PDB: 3vcp_A Length = 412 | Back alignment and structure |
|---|
| >2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2b24_A Length = 470 | Back alignment and structure |
|---|
| >3n0q_A Putative aromatic-ring hydroxylating dioxygenase; rieske [2Fe-2S] domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} Length = 409 | Back alignment and structure |
|---|
| >2bmo_A Oxygenase-alpha NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2bmq_A 2bmr_A* 2hmj_A 2hml_A* 2hmn_A* 1o7n_A 1ndo_A 1o7g_A* 1o7h_A 1o7m_A 1eg9_A 1o7p_A* 1o7w_A 1uuv_A 1uuw_A 2hmk_A* 2hmm_A* 2hmo_A* Length = 447 | Back alignment and structure |
|---|
| >2gbw_A Biphenyl 2,3-dioxygenase alpha subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_A* 2ckf_A Length = 454 | Back alignment and structure |
|---|
| >3gzx_A Biphenyl dioxygenase subunit alpha; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} PDB: 3gzy_A* 1wql_A 2xso_A 2xsh_A 2xrx_A* 2xr8_A* 2yfi_A 2yfj_A* Length = 457 | Back alignment and structure |
|---|
| >1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A Length = 460 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 534 | |||
| 3gke_A | 349 | DDMC; rieske cluster, non-heme mononuclear iron, o | 100.0 | |
| 1z01_A | 446 | 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygen | 100.0 | |
| 2zyl_A | 386 | Possible oxidoreductase; KSHA, cholesterol, rieske | 100.0 | |
| 3n0q_A | 409 | Putative aromatic-ring hydroxylating dioxygenase; | 100.0 | |
| 2de6_A | 392 | Terminal oxygenase component of carbazole; electro | 100.0 | |
| 3vca_A | 412 | Ring-hydroxylating dioxygenase; rieske-type, monon | 100.0 | |
| 3gkq_A | 389 | Terminal oxygenase component of carbazole 1,9A- di | 100.0 | |
| 3gcf_A | 394 | Terminal oxygenase component of carbazole 1,9A- di | 100.0 | |
| 2gbw_A | 454 | Biphenyl 2,3-dioxygenase alpha subunit; rieske oxy | 100.0 | |
| 2b1x_A | 470 | Naphthalene dioxygenase large subunit; rieske non- | 100.0 | |
| 2bmo_A | 447 | Oxygenase-alpha NBDO; nitrobenzene dioxygenase, ni | 100.0 | |
| 3gzx_A | 457 | Biphenyl dioxygenase subunit alpha; rieskie, non-h | 100.0 | |
| 1uli_A | 460 | Biphenyl dioxygenase large subunit; alpha3 BETA3 h | 100.0 | |
| 2qpz_A | 103 | Naphthalene 1,2-dioxygenase system ferredoxin subu | 99.94 | |
| 1vm9_A | 111 | Toluene-4-monooxygenase system protein C; structur | 99.94 | |
| 2de6_D | 115 | Ferredoxin component of carbazole; electron transf | 99.94 | |
| 1fqt_A | 112 | Rieske-type ferredoxin of biphenyl dioxygenase; 2F | 99.94 | |
| 2i7f_A | 108 | Ferredoxin component of dioxygenase; rieske ferred | 99.94 | |
| 3dqy_A | 106 | Toluene 1,2-dioxygenase system ferredoxin subunit; | 99.93 | |
| 2jza_A | 130 | Nitrite reductase [NAD(P)H] small subunit; ISP dom | 99.93 | |
| 2jo6_A | 113 | Nitrite reductase [NAD(P)H] small subunit; all bet | 99.93 | |
| 3c0d_A | 119 | Putative nitrite reductase NADPH (small subunit) o | 99.93 | |
| 3gce_A | 121 | Ferredoxin component of carbazole 1,9A- dioxygenas | 99.93 | |
| 3d89_A | 157 | Rieske domain-containing protein; CAsp target, rie | 99.93 | |
| 4aiv_A | 119 | Probable nitrite reductase [NAD(P)H] small subuni; | 99.93 | |
| 1rfs_A | 139 | Rieske protein; iron-sulfur protein, electron tran | 99.84 | |
| 1rie_A | 129 | Rieske iron-sulfur protein; oxidoreductase, cytoch | 99.83 | |
| 1g8k_B | 133 | Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, | 99.81 | |
| 3azc_A | 133 | Cytochrome B6-F complex iron-sulfur subunit; riesk | 99.66 | |
| 4aay_B | 175 | AROB; oxidoreductase, rieske, iron sulfur, molybdo | 99.78 | |
| 1nyk_A | 165 | Rieske iron-sulfur protein; beta barrel, iron sulf | 99.7 | |
| 1pp9_E | 196 | Ubiquinol-cytochrome C reductase iron-sulfur SUBU | 99.7 | |
| 2qjy_C | 187 | Ubiquinol-cytochrome C reductase iron-sulfur SUBU; | 99.7 | |
| 3cx5_E | 185 | Cytochrome B-C1 complex subunit rieske, mitochondr | 99.69 | |
| 2nwf_A | 141 | Ubiquinol-cytochrome C reductase iron-sulfur SUBU; | 99.69 | |
| 1vf5_D | 179 | Rieske iron-sulfur protein; photosynthesis, membra | 99.64 | |
| 1jm1_A | 204 | Rieske iron-sulfur protein SOXF; electron transpor | 99.55 |
| >3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-53 Score=438.34 Aligned_cols=313 Identities=21% Similarity=0.349 Sum_probs=240.2
Q ss_pred ccccCcEEeeecCCCCCCCcEEEEEcCEEEEEEEecCCcEEEEeCCCCCCCCccccCcccccEEEccCCCeEEecCCcee
Q 039074 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157 (534)
Q Consensus 78 ~~~~~W~~v~~~~dl~~~~~~~~~l~g~~lvv~r~~~G~~~a~~d~CpHRga~Ls~G~i~~~~l~CpyHGW~Fd~~G~c~ 157 (534)
.+++.||+||.++|| +++++.++++|++|+|||+.+|+++|++|+|||||++|+.|+++++.|+||||||+||.||+|+
T Consensus 4 ~~~~~W~~v~~~~el-~g~~~~~~~~g~~vvv~R~~~G~v~a~~n~CpHrg~~L~~G~~~~~~i~CpyHgw~fd~~G~~~ 82 (349)
T 3gke_A 4 FVRNAWYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQCPYHGLEFDGGGQCV 82 (349)
T ss_dssp CCCSSCEEEECGGGC-CSSCEEEEETTEEEEEEECTTSCEEEEESSCTTTCCCGGGCEEETTEEECTTTCCEECTTCCEE
T ss_pred ccccccEEEEEHHHC-CCCeEEEEECCEEEEEEEcCCCcEEEEeCcCCCCCcCCccCCccceEEEECCCCCEEcCCCCcc
Confidence 467899999999999 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCccCccceEEEEEecCeEEEEcCCCCCCCCCCCCccccccCCCceeeeeEEEeecChhhhcccCCCCcc
Q 039074 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237 (534)
Q Consensus 158 ~iP~~~~~~~~~~~~~l~~~pv~~~~G~Vwv~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~~~~~~~~~~~EN~lD~~H 237 (534)
.+|+. ...++...++++|||++++|+||||+++++.++...+|.++++++++|.......+++|||++++||++|+||
T Consensus 83 ~~P~~--~~~~~~~~~l~~~~v~~~~G~V~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~nwk~~~EN~~D~~H 160 (349)
T 3gke_A 83 HNPHG--NGARPASLNVRSFPVVERDALIWIWPGDPALADPGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGH 160 (349)
T ss_dssp ECCST--TCCCCGGGCCCBCCEEEETTEEEECCSCGGGCCGGGSCCCGGGGCTTSEEEEEEEEESSCHHHHHHHHHCGGG
T ss_pred ccCcc--ccccccccccceeeEEEECCEEEEeeCCCCCCcccccCCccccCCCCCEEEeEEEEEecCHHhHHHhcccccc
Confidence 99962 2345667889999999999999999987654444557888877778887666667899999999999999999
Q ss_pred CccccCCcccccccccCCCceEEEEeeccCccccc-cC-------------C--CCCCCCCeEEEEecCeeeecceeeec
Q 039074 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR-WG-------------K--EKDEPLPNFLRFEAPCVLQNNRELVD 301 (534)
Q Consensus 238 ~~~~H~~~~~~~~r~~~~p~~~~v~~~~~~gf~~~-~~-------------~--~~~~~~~~~~~F~~P~~~~~~~~~~~ 301 (534)
++|+|+++++. ++.. ....+++. +..++... +. . +...+.+..++|.+||++..++.+.+
T Consensus 161 ~~~~H~~~~~~--~~~~-~~~~~v~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~P~~~~~~~~~~~ 236 (349)
T 3gke_A 161 AQYVHRANAQT--DAFD-RLEREVIV-GDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWNDIRWNKVSAMLNFIAVAP 236 (349)
T ss_dssp HHHHTHHHHCC--TTGG-GCEEEEEE-CSSEEEEEEEEEEECCCHHHHHHTTTCCSCEEEEEEEEEETTTEEEEEEEEEE
T ss_pred chhccchhhcC--cccc-CCCCEEEE-cCCEEEEEEEecCCCCChHHHhhcccCCCCceeEEEEEEECCEEEEEEEeccc
Confidence 99999988643 2222 12334442 22233111 10 0 00112235789999999877665432
Q ss_pred CC--CCceeEEEEEEEeeeCCCCeEEEEEEEecCCCCcccccchhhhhhhhhhhhH-HhHHHHHHHHHHhhhhcCCCccc
Q 039074 302 SK--TGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVF-EQDMGFLSSQNEVLMKETVPTKE 378 (534)
Q Consensus 302 ~~--~G~~~~~~~v~~~~Pv~pg~trl~~~~~~~~~~~~~~~~p~w~~h~~~~~Vl-~eD~~iL~~Qe~~l~~~~~~~k~ 378 (534)
.+ ......+..+++|+|+++++||+++.+.+|+......+.+.|. .++++|| +||+.|||.||+++...+. ...
T Consensus 237 ~g~p~~~~~~~~~~~~~tP~s~~~tr~~~~~~rn~~~~d~~~~~~~~--~~~~~if~~ED~~ile~Qq~~l~~~~~-~~~ 313 (349)
T 3gke_A 237 EGTPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGIDDPEMDGVLR--SWQAQALVKEDKVVVEAIERRRAYVEA-NGI 313 (349)
T ss_dssp TTSCGGGSEEEEEEEEEEEEETTEEEEEEEEEESSSTTCHHHHHHHH--HHHHHHTTTHHHHHHHHHHHTHHHHHH-TTC
T ss_pred CCCCCCCceEEEEEEEEecCCCCeEEEEEEEEecCccCchhhhHHHH--HHHhhhhhhhhHHHHHHHHHHhhcCCc-ccc
Confidence 11 1112345567889999999999999999998754333334443 4577898 9999999999999887421 122
Q ss_pred cccccCcCcHHHHHHHHHHHHhC
Q 039074 379 LYLNLRSSDTWVAEYRKWMDKVG 401 (534)
Q Consensus 379 ~y~~~~~aD~~ViafRrWl~~~~ 401 (534)
.++ +..+|+++++|||||+++.
T Consensus 314 ~~~-~~~~D~~~v~~Rr~l~~l~ 335 (349)
T 3gke_A 314 RPA-MLSCDEAAVRVSREIEKLE 335 (349)
T ss_dssp CCC-CCGGGHHHHHHHHHHHHHH
T ss_pred ccc-cccccHHHHHHHHHHHHHH
Confidence 233 3578999999999999974
|
| >1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A* | Back alignment and structure |
|---|
| >2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3n0q_A Putative aromatic-ring hydroxylating dioxygenase; rieske [2Fe-2S] domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} | Back alignment and structure |
|---|
| >2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A* | Back alignment and structure |
|---|
| >3vca_A Ring-hydroxylating dioxygenase; rieske-type, mononuclear non-heme iron, N-demethylase, oxido; 1.59A {Sinorhizobium meliloti} PDB: 3vcp_A | Back alignment and structure |
|---|
| >3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas} | Back alignment and structure |
|---|
| >3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans} | Back alignment and structure |
|---|
| >2gbw_A Biphenyl 2,3-dioxygenase alpha subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_A* 2ckf_A | Back alignment and structure |
|---|
| >2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2b24_A | Back alignment and structure |
|---|
| >2bmo_A Oxygenase-alpha NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2bmq_A 2bmr_A* 2hmj_A 2hml_A* 2hmn_A* 1o7n_A 1ndo_A 1o7g_A* 1o7h_A 1o7m_A 1eg9_A 1o7p_A* 1o7w_A 1uuv_A 1uuw_A 2hmk_A* 2hmm_A* 2hmo_A* | Back alignment and structure |
|---|
| >3gzx_A Biphenyl dioxygenase subunit alpha; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} PDB: 3gzy_A* 1wql_A 2xso_A 2xsh_A 2xrx_A* 2xr8_A* 2yfi_A 2yfj_A* 2yfl_A* | Back alignment and structure |
|---|
| >1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A | Back alignment and structure |
|---|
| >2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida} | Back alignment and structure |
|---|
| >1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A | Back alignment and structure |
|---|
| >2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D* | Back alignment and structure |
|---|
| >1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B* | Back alignment and structure |
|---|
| >2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae} | Back alignment and structure |
|---|
| >3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B* | Back alignment and structure |
|---|
| >2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3 | Back alignment and structure |
|---|
| >2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3 | Back alignment and structure |
|---|
| >3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3 | Back alignment and structure |
|---|
| >3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans} | Back alignment and structure |
|---|
| >3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus} | Back alignment and structure |
|---|
| >4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C* | Back alignment and structure |
|---|
| >1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1 | Back alignment and structure |
|---|
| >1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B* | Back alignment and structure |
|---|
| >3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
| >4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species} | Back alignment and structure |
|---|
| >1nyk_A Rieske iron-sulfur protein; beta barrel, iron sulfur cluster, electron transport; 1.31A {Thermus thermophilus} SCOP: b.33.1.1 PDB: 3fou_A | Back alignment and structure |
|---|
| >1pp9_E Ubiquinol-cytochrome C reductase iron-sulfur SUBU mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: b.33.1.1 f.23.12.1 PDB: 1bgy_E* 1be3_E* 1l0n_E* 1ntk_E* 1ntm_E* 1ntz_E* 1nu1_E* 1l0l_E* 1ppj_E* 1qcr_E* 1sqb_E* 1sqp_E* 1sqq_E* 1sqv_E* 1sqx_E* 2a06_E* 2fyu_E* 2ybb_E* 1bcc_E* 2bcc_E* ... | Back alignment and structure |
|---|
| >2qjy_C Ubiquinol-cytochrome C reductase iron-sulfur SUBU; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_C* 2qjk_C* 2qjp_C* 1zrt_E* 2yiu_C* | Back alignment and structure |
|---|
| >3cx5_E Cytochrome B-C1 complex subunit rieske, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: b.33.1.1 f.23.12.1 PDB: 1kb9_E* 1kyo_E* 1p84_E* 2ibz_E* 1ezv_E* 3cxh_E* | Back alignment and structure |
|---|
| >2nwf_A Ubiquinol-cytochrome C reductase iron-sulfur SUBU; rieske [2Fe-2S] ISP, oxidoreductase; HET: GOL; 1.10A {Rhodobacter sphaeroides} PDB: 2nuk_A 2nve_A 2num_A 2nvg_A 2nvf_A | Back alignment and structure |
|---|
| >1vf5_D Rieske iron-sulfur protein; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: b.33.1.1 f.23.12.1 PDB: 2d2c_D* 2e74_D* 2e75_D* 2e76_D* 2zt9_D* | Back alignment and structure |
|---|
| >1jm1_A Rieske iron-sulfur protein SOXF; electron transport, respiratory chain, oxidoreductase; 1.11A {Sulfolobus acidocaldarius} SCOP: b.33.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 534 | ||||
| d1z01a1 | 148 | b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-m | 3e-27 | |
| d2de6a1 | 142 | b.33.1.2 (A:1-142) Terminal oxygenase component of | 1e-23 | |
| d1rfsa_ | 127 | b.33.1.1 (A:) ISP subunit from chloroplast cytochr | 1e-16 | |
| d1fqta_ | 109 | b.33.1.1 (A:) Rieske-type ferredoxin associated wi | 2e-16 | |
| d1vm9a_ | 109 | b.33.1.1 (A:) Toluene-4-monooxygenase system prote | 7e-16 | |
| d2e74d1 | 134 | b.33.1.1 (D:46-179) ISP subunit from the cytochrom | 3e-14 | |
| d2jo6a1 | 108 | b.33.1.3 (A:1-108) NADH-nitrite reductase small su | 3e-13 | |
| d2jzaa1 | 122 | b.33.1.3 (A:1-122) NADH-nitrite reductase small su | 5e-13 | |
| d3c0da1 | 108 | b.33.1.3 (A:4-111) NADH-nitrite reductase small su | 2e-11 | |
| d1g8kb_ | 133 | b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alc | 8e-09 | |
| d1nyka_ | 156 | b.33.1.1 (A:) Soluble Rieske protein {Thermus ther | 8e-07 | |
| d1z01a2 | 279 | d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8 | 9e-07 | |
| d2bmoa1 | 150 | b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha | 4e-06 | |
| d1ulia1 | 154 | b.33.1.2 (A:17-170) Biphenyl dioxygenase large sub | 1e-05 | |
| d2b1xa1 | 162 | b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alp | 2e-05 |
| >d1z01a1 b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} Length = 148 | Back information, alignment and structure |
|---|
class: All beta proteins fold: ISP domain superfamily: ISP domain family: Ring hydroxylating alpha subunit ISP domain domain: 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO species: Pseudomonas putida [TaxId: 303]
Score = 105 bits (262), Expect = 3e-27
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
A + + WYP T ++ +D G+ + IVL + NG++ +D+C HR +LSE
Sbjct: 21 AAWGFINHWYPALFTHELEEDQVQGIQICGVPIVLRRV-NGKVFALKDQCLHRGVRLSEK 79
Query: 135 QLI--DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ C YHG+ F+ E + + K+ + V TY V E G+++V++ +
Sbjct: 80 PTCFTKSTISCWYHGFTFDLETGKLVTIVANPEDKLIGTTGVTTYPVHEVNGMIFVFVRE 139
Query: 193 KTPPNPD 199
P+ D
Sbjct: 140 DDFPDED 146
|
| >d2de6a1 b.33.1.2 (A:1-142) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]} Length = 142 | Back information, alignment and structure |
|---|
| >d1rfsa_ b.33.1.1 (A:) ISP subunit from chloroplast cytochrome bf complex {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 127 | Back information, alignment and structure |
|---|
| >d1fqta_ b.33.1.1 (A:) Rieske-type ferredoxin associated with biphenyl dioxygenase {Burkholderia cepacia [TaxId: 292]} Length = 109 | Back information, alignment and structure |
|---|
| >d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]} Length = 109 | Back information, alignment and structure |
|---|
| >d2e74d1 b.33.1.1 (D:46-179) ISP subunit from the cytochrome b6f complex, soluble domain {Mastigocladus laminosus [TaxId: 83541]} Length = 134 | Back information, alignment and structure |
|---|
| >d2jo6a1 b.33.1.3 (A:1-108) NADH-nitrite reductase small subunit NirD {Escherichia coli [TaxId: 562]} Length = 108 | Back information, alignment and structure |
|---|
| >d2jzaa1 b.33.1.3 (A:1-122) NADH-nitrite reductase small subunit NirD {Erwinia carotovora [TaxId: 554]} Length = 122 | Back information, alignment and structure |
|---|
| >d3c0da1 b.33.1.3 (A:4-111) NADH-nitrite reductase small subunit NirD {Vibrio parahaemolyticus [TaxId: 670]} Length = 108 | Back information, alignment and structure |
|---|
| >d1g8kb_ b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alcaligenes faecalis [TaxId: 511]} Length = 133 | Back information, alignment and structure |
|---|
| >d1nyka_ b.33.1.1 (A:) Soluble Rieske protein {Thermus thermophilus [TaxId: 274]} Length = 156 | Back information, alignment and structure |
|---|
| >d1z01a2 d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} Length = 279 | Back information, alignment and structure |
|---|
| >d2bmoa1 b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]} Length = 150 | Back information, alignment and structure |
|---|
| >d1ulia1 b.33.1.2 (A:17-170) Biphenyl dioxygenase large subunit BphA1, N-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]} Length = 154 | Back information, alignment and structure |
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| >d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]} Length = 162 | Back information, alignment and structure |
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Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 534 | |||
| d1ulia1 | 154 | Biphenyl dioxygenase large subunit BphA1, N-termin | 100.0 | |
| d2b1xa1 | 162 | Naphthalene 1,2-dioxygenase alpha subunit, N-domai | 99.98 | |
| d2bmoa1 | 150 | Nitrobenzene dioxygenase alpha subunit, NBDO-alpha | 99.97 | |
| d2de6a1 | 142 | Terminal oxygenase component of carbazole CarAa {J | 99.97 | |
| d1z01a1 | 148 | 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygen | 99.96 | |
| d2jzaa1 | 122 | NADH-nitrite reductase small subunit NirD {Erwinia | 99.92 | |
| d1vm9a_ | 109 | Toluene-4-monooxygenase system protein C, TmoC {Ps | 99.91 | |
| d2jo6a1 | 108 | NADH-nitrite reductase small subunit NirD {Escheri | 99.91 | |
| d1fqta_ | 109 | Rieske-type ferredoxin associated with biphenyl di | 99.9 | |
| d3c0da1 | 108 | NADH-nitrite reductase small subunit NirD {Vibrio | 99.89 | |
| d1rfsa_ | 127 | ISP subunit from chloroplast cytochrome bf complex | 99.75 | |
| d2e74d1 | 134 | ISP subunit from the cytochrome b6f complex, solub | 99.7 | |
| d1g8kb_ | 133 | Arsenite oxidase Rieske subunit {Alcaligenes faeca | 99.66 | |
| d1z01a2 | 279 | 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygen | 99.54 | |
| d1nyka_ | 156 | Soluble Rieske protein {Thermus thermophilus [TaxI | 99.48 | |
| d3cx5e1 | 129 | ISP subunit of the mitochondrial cytochrome bc1-co | 99.08 | |
| d1riea_ | 127 | ISP subunit of the mitochondrial cytochrome bc1-co | 98.94 | |
| d1jm1a_ | 202 | Rieske protein II (SoxF) {Archaeon Sulfolobus acid | 98.71 | |
| d2de6a2 | 242 | Terminal oxygenase component of carbazole CarAa {J | 98.24 | |
| d2b1xa2 | 279 | Naphthalene 1,2-dioxygenase alpha subunit, C-domai | 97.43 | |
| d2bmoa2 | 287 | Nitrobenzene dioxygenase alpha subunit, NBDO-alpha | 97.15 | |
| d1ulia2 | 281 | Biphenyl dioxygenase large subunit BphA1, C-termin | 96.71 | |
| d1wqla2 | 279 | Large subunit of cumene dioxygenase cumA1 {Pseudom | 90.35 |
| >d1ulia1 b.33.1.2 (A:17-170) Biphenyl dioxygenase large subunit BphA1, N-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: ISP domain superfamily: ISP domain family: Ring hydroxylating alpha subunit ISP domain domain: Biphenyl dioxygenase large subunit BphA1, N-terminal domain species: Rhodococcus sp. (strain RHA1) [TaxId: 101510]
Probab=100.00 E-value=1.1e-33 Score=258.97 Aligned_cols=138 Identities=15% Similarity=0.326 Sum_probs=122.2
Q ss_pred CCccccCCCCcccccccccccccccccCcEEeeecCCCCCCC-cEEEEEcCEEEEEEEecCCcEEEEeCCCCCCCCcccc
Q 039074 55 DHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133 (534)
Q Consensus 55 ~~~~~~p~~~y~~~~~~~~e~~~~~~~~W~~v~~~~dl~~~~-~~~~~l~g~~lvv~r~~~G~~~a~~d~CpHRga~Ls~ 133 (534)
+.+..+|++.|+++++++.|.+.+|.+.|++||+++||++.+ .++++++|++|+|+|+++|+++||.|+|||||++|.+
T Consensus 12 ~~~~~l~~~~Y~~~~~~~~E~~~if~~~W~~v~~~~el~~~g~~~~~~i~~~~ilv~R~~~g~i~af~N~C~HRG~~L~~ 91 (154)
T d1ulia1 12 ERTGRLDPRIYTDEALYEQELERIFGRSWLLMGHETQIPKAGDFMTNYMGEDPVMVVRQKNGEIRVFLNQCRHRGMRICR 91 (154)
T ss_dssp TTTTEECGGGGTCHHHHHHHHHHTTTTSCEEEEEGGGSCSTTEEEEEEETTEEEEEEECTTSCEEEEESCCTTTCCCSCC
T ss_pred hhcCcCCHHHcCCHHHHHHHHHHHhccCCEEEEEhhhCCCCcceeeeecCCcceeEEeecccceeeeecccccCCceeee
Confidence 445568999999999999999999999999999999998755 4788999999999999999999999999999999998
Q ss_pred Ccc-cccEEEccCCCeEEecCCceeecCCCCCC-CCCC-ccCccceEEEEEecCeEEEEcCC
Q 039074 134 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD-AKIP-RSACVRTYEVKESQGVVWVWMSQ 192 (534)
Q Consensus 134 G~i-~~~~l~CpyHGW~Fd~~G~c~~iP~~~~~-~~~~-~~~~l~~~pv~~~~G~Vwv~~~~ 192 (534)
|.. .++.|+||||||+||.+|+|+.+|..+.. ..++ ++.+++.++|++++|+|||++++
T Consensus 92 ~~~g~~~~l~CpYHgW~f~~~G~~~~iP~~~~~~~~~~~~~~~L~~~~v~~~~G~Ifv~~d~ 153 (154)
T d1ulia1 92 ADGGNAKSFTCSYHGWAYDTGGNLVSVPFEEQAFPGLRKEDWGPLQARVETYKGLIFANWDA 153 (154)
T ss_dssp SSEEECSCEECTTTCCEECTTCCEEECTTHHHHCTTCCGGGSSCCEEEEEEETTEEEEECCT
T ss_pred cCCCccceEEeeeceeEEecCCccccCCcccccCCCCChHHCCCeEEeEEEECCEEEEEeCC
Confidence 764 67889999999999999999999975432 2233 35679999999999999999975
|
| >d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]} | Back information, alignment and structure |
|---|
| >d2bmoa1 b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]} | Back information, alignment and structure |
|---|
| >d2de6a1 b.33.1.2 (A:1-142) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
| >d1z01a1 b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2jzaa1 b.33.1.3 (A:1-122) NADH-nitrite reductase small subunit NirD {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
| >d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]} | Back information, alignment and structure |
|---|
| >d2jo6a1 b.33.1.3 (A:1-108) NADH-nitrite reductase small subunit NirD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fqta_ b.33.1.1 (A:) Rieske-type ferredoxin associated with biphenyl dioxygenase {Burkholderia cepacia [TaxId: 292]} | Back information, alignment and structure |
|---|
| >d3c0da1 b.33.1.3 (A:4-111) NADH-nitrite reductase small subunit NirD {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
| >d1rfsa_ b.33.1.1 (A:) ISP subunit from chloroplast cytochrome bf complex {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d2e74d1 b.33.1.1 (D:46-179) ISP subunit from the cytochrome b6f complex, soluble domain {Mastigocladus laminosus [TaxId: 83541]} | Back information, alignment and structure |
|---|
| >d1g8kb_ b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
| >d1z01a2 d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1nyka_ b.33.1.1 (A:) Soluble Rieske protein {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d3cx5e1 b.33.1.1 (E:87-215) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1riea_ b.33.1.1 (A:) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1jm1a_ b.33.1.1 (A:) Rieske protein II (SoxF) {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d2de6a2 d.129.3.3 (A:143-384) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
| >d2b1xa2 d.129.3.3 (A:163-441) Naphthalene 1,2-dioxygenase alpha subunit, C-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]} | Back information, alignment and structure |
|---|
| >d2bmoa2 d.129.3.3 (A:153-439) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]} | Back information, alignment and structure |
|---|
| >d1ulia2 d.129.3.3 (A:171-451) Biphenyl dioxygenase large subunit BphA1, C-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]} | Back information, alignment and structure |
|---|
| >d1wqla2 d.129.3.3 (A:181-459) Large subunit of cumene dioxygenase cumA1 {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
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