Citrus Sinensis ID: 039120

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750

MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDQRAENCSNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL

cccccEEEEEccEEEEccEEccccccccEEEcccccccccccEEEEccccccccEEEEEcccccccccEEEEEcccccccccccccccccccccEEEEEEEccccEEEcccccccccEEEEEEEEcccccEEEEEEccccccEEEEEcccccccccccccEEEEEEEccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEEEEcccccccccccccccHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHccccEEEEcccccccHHHHHHHcccccccccccccccccEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEEcccEEEEccccccEEEEEccccEEEEEEEEEEEcccccEEEEcccccccccccEEEEEEEEEEcccEEEEEcccccccccccccccccccEEEEEEEccEEEEEEEcccccEEEEcccEEEEEEEccccEEEEEccccccccccEEEEEEEc

cccccEEEEcccEEEEccEEEEccccccEEEEccccccccccEEEEEccccccccEEEEcccccccEEEEEEEEEEEHHccccccccccccHccEEEEEEccccccccccccccccccEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHHcccccHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEEcccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHccccEEEEEHHHHccccccccccccHHHcccEEEcccccccccccccHHcccHHHccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEHcccccHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEEEEccccccEEEEEEccccccccccccccccccccccEEEEEcHHHccccccccccccccccEEEEEEcccEEEEccccccEEEEEccccEEEEEEEEEEEcccccEEEEEEHHHccccccEEEEEEEEccccccEccccccccccccccccccccEEEEEEEEEcccEEEEEEcccccEEEEccEEEEEEEcccccEEEEEcccccccccEEEEEEEEc

MTIKPVVRIAERKlivkdrtiltgvpdnlittsgstsgpveGVFIGAafdeessrhvlpigalrDIRFLACFRFKLWWMAQKmgdhgseiplETQFLLVEtkegshiesndgnednqIVYTVFLPLIEGSFRACLQGNANDELELCLesgdsdtkassfshslfvhagtdpfgTITEAIRAVNLHLKTFRQRHEKklpgivdyfgwctWDAFYQEVTQEGVEAGLESlakggtppkfviiddgwqlvggddhssndenekkqqplmrltgikenekfqknedpktgiKNIVDIAKTKHGLKYVYVWHAITgywggvrpgiKEMEEYESLmkypmlskgvveneptwktdVMAVqglglvnpknvYKFYNELHGYLasagidgvKVDVQCILETLgaglggrvELTRQYHQALDAsvarnfpdngciacmshntdalycskQTAIvrasddfyprdptshtIHIAAVAYNsvflgeimrpdwdmfhslhpaaeyhgsaraisggpiyvsdapgkhNFELLKKlvlpdgllkiWNMNKYTGVLGvyncqgaawnkterkntfhettsdaitgqirgrDVHLIaeaatdpnwtgdcaiychrtgelitlpynaampVSLKVLEHEiftvtpikflspgfsfaplglvnmFNAGGAIEGLKYVVEGGAKlteiddgyggdqraencsnelvGKVSMEVkgcgkfgayasakprrctvdsnevefeydsnsglvtfgleklpdedkkvhfvdval

mtikpvvriaerklivkdrtiltgvpdnlittsgstsgpvEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGShiesndgnednQIVYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVGGDDHssndenekkqqplmrltgikenekfqknedpktgikNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGLLKIWNMNKYTGVLGVYNCQGAAWNKterkntfhettsdaitgqirGRDVHLIAEaatdpnwtGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEiddgyggdqRAENCSNELVGKVSMEVKGCGKfgayasakprrcTVDSNEVEFEYDSNSGLVTFgleklpdedkkvhfvdval

MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFEllkklvlpdgllkIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDQRAENCSNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL

*****VVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVET**************NQIVYTVFLPLIEGSFRACLQGNANDELELCL***********FSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVG*************************************GIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDQRAENCSNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEK***************

****PVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAF**ESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKN*D*KTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKL*********************GKVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL

MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACLQGNANDELELCLE**********FSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVGGD************QPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDQRAENCSNELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL

*TIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESN***EDNQIVYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVIIDDGWQLVGGDDH********KQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDGLLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTE**DG************ELVGKVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		750	2.2.26 [Sep-21-2011]
Q8RX87		749	Probable galactinol--sucr	no	no	0.96	0.961	0.712	0.0
Q94A08		773	Probable galactinol--sucr	no	no	0.982	0.953	0.538	0.0
Q84VX0		754	Probable galactinol--sucr	no	no	0.958	0.953	0.503	0.0
Q9FND9		783	Probable galactinol--sucr	no	no	0.914	0.876	0.364	1e-138
Q5VQG4		783	Galactinol--sucrose galac	no	no	0.913	0.874	0.370	1e-138
Q8VWN6		798	Galactinol--sucrose galac	N/A	no	0.858	0.807	0.377	1e-136
Q9SYJ4		876	Probable galactinol--sucr	no	no	0.538	0.461	0.327	1e-71
Q93XK2		853	Stachyose synthase OS=Pis	N/A	no	0.601	0.528	0.324	4e-71
Q97U94		648	Alpha-galactosidase OS=Su	yes	no	0.474	0.549	0.307	3e-34

>sp\|Q8RX87\|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2	Back alignment and function desciption

 Score = 1152 bits (2980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/779 (71%), Positives = 638/779 (81%), Gaps = 59/779 (7%)

Query: 1   MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPI 60
           MTIKP VRI++  LI+K+RTILTGVPDN+ITTS S +GPVEGVF+GA F++E S+H++PI
Sbjct: 1   MTIKPAVRISDGNLIIKNRTILTGVPDNVITTSASEAGPVEGVFVGAVFNKEESKHIVPI 60

Query: 61  GALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGN--EDNQI 118
           G LR+ RF++CFRFKLWWMAQ+MG+ G +IP ETQFLLVE+ +GSH+ES+  N  E NQ 
Sbjct: 61  GTLRNSRFMSCFRFKLWWMAQRMGEMGRDIPYETQFLLVESNDGSHLESDGANGVECNQK 120

Query: 119 VYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEA 178
           VYTVFLPLIEGSFR+CLQGN NDE+ELCLESGD DTK SSF+HSL++HAGTDPF TIT+A
Sbjct: 121 VYTVFLPLIEGSFRSCLQGNVNDEVELCLESGDVDTKRSSFTHSLYIHAGTDPFQTITDA 180

Query: 179 IRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFV 238
           IR V LHL +FRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGL+SLA GGTPPKFV
Sbjct: 181 IRTVKLHLNSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFV 240

Query: 239 IIDDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKH 298
           IIDDGWQ V   D +    +EKK+ P+ RLTGIKENEKF+K +DP  GIKNIV IAK KH
Sbjct: 241 IIDDGWQSVE-RDATVEAGDEKKESPIFRLTGIKENEKFKKKDDPNVGIKNIVKIAKEKH 299

Query: 299 GLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGL 358
           GLKYVYVWHAITGYWGGVRPG    EEY S+MKYP +SKGVVEN+PTWKTDVM +QGLGL
Sbjct: 300 GLKYVYVWHAITGYWGGVRPG----EEYGSVMKYPNMSKGVVENDPTWKTDVMTLQGLGL 355

Query: 359 VNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVAR 418
           V+PK VYKFYNELH YLA AG+DGVKVDVQC+LETLG GLGGRVELTRQ+HQALD+SVA+
Sbjct: 356 VSPKKVYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAK 415

Query: 419 NFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMR 478
           NFPDNGCIACMSHNTDALYCSKQ A++RASDDFYPRDP SHTIHIA+VAYNSVFLGE M+
Sbjct: 416 NFPDNGCIACMSHNTDALYCSKQAAVIRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMQ 475

Query: 479 PDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDG----------- 527
           PDWDMFHS+HPAAEYH SARAISGGP+YVSD+PGKHNFELL+KLVLPDG           
Sbjct: 476 PDWDMFHSVHPAAEYHASARAISGGPLYVSDSPGKHNFELLRKLVLPDGSILRARLPGRP 535

Query: 528 ---------------LLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQI 572
                          LLKIWNMNKYTGVLGVYNCQGAAW+ TERKN FH+T +D++TG I
Sbjct: 536 TRDCLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSI 595

Query: 573 RGRDVHLIAEAATDP-NWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKF 631
           RGRDVH I+EA+TDP  W GDCA+Y    GELI +PYN ++PVSLK+ EHEIFTV+PI  
Sbjct: 596 RGRDVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISH 655

Query: 632 LSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDQRAENCSNELVGKVS 691
           L  G SFAP+GLVNM+N+GGAIEGL+Y  E   K+                      KV 
Sbjct: 656 LVDGVSFAPIGLVNMYNSGGAIEGLRYEAE---KM----------------------KVV 690

Query: 692 MEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL 750
           MEVKGCGKFG+Y+S KP+RC V+SNE+ FEYDS+SGLVTF L+K+P E+K+ H + V L
Sbjct: 691 MEVKGCGKFGSYSSVKPKRCVVESNEIAFEYDSSSGLVTFELDKMPIENKRFHLIQVEL 749

Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2

>sp\|Q94A08\|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2	Back alignment and function description

>sp\|Q84VX0\|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1	Back alignment and function description

>sp\|Q9FND9\|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1	Back alignment and function description

>sp\|Q5VQG4\|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q8VWN6\|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q9SYJ4\|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3	Back alignment and function description

>sp\|Q93XK2\|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	Back alignment and function description

>sp\|Q97U94\|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		750
255582335		805	hydrolase, hydrolyzing O-glycosyl compou	0.993	0.925	0.773	0.0
359484223		782	PREDICTED: probable galactinol--sucrose	1.0	0.959	0.773	0.0
224087090		752	predicted protein [Populus trichocarpa]	0.964	0.961	0.772	0.0
224142577		752	predicted protein [Populus trichocarpa]	0.964	0.961	0.774	0.0
449464974		783	PREDICTED: probable galactinol--sucrose	1.0	0.957	0.739	0.0
147865342		742	hypothetical protein VITISV_031573 [Viti	0.954	0.964	0.756	0.0
334187792		844	putative galactinol--sucrose galactosylt	0.96	0.853	0.711	0.0
15241300		749	putative galactinol--sucrose galactosylt	0.96	0.961	0.712	0.0
222424044		749	AT5G20250 [Arabidopsis thaliana]	0.96	0.961	0.711	0.0
312281695		748	unnamed protein product [Thellungiella h	0.957	0.959	0.712	0.0

>gi\|255582335\|ref\|XP_002531958.1\| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi\|223528404\|gb\|EEF30440.1\| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/782 (77%), Positives = 683/782 (87%), Gaps = 37/782 (4%)

Query: 1   MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPI 60
           MTIKP VRI++RKLIVKDRTILTG+ DN+I TSGS+S PVEGVFIGA FDEE+SRHV+P+
Sbjct: 29  MTIKPAVRISDRKLIVKDRTILTGLQDNVIATSGSSSSPVEGVFIGAVFDEENSRHVVPL 88

Query: 61  GALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVY 120
           G LRD+RF+ACFRFKL+WMAQKMGDHG +IPLETQFL++ETK+GS +ES+ GNE+NQI+Y
Sbjct: 89  GTLRDVRFMACFRFKLFWMAQKMGDHGRDIPLETQFLMMETKDGSQLESDGGNEENQIIY 148

Query: 121 TVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIR 180
           TVFLPLIEGSFRACLQGN NDELELCLESGD DTKA+SF+H LF+HAGTDPFGT+TEA+R
Sbjct: 149 TVFLPLIEGSFRACLQGNDNDELELCLESGDVDTKAASFTHPLFIHAGTDPFGTLTEAVR 208

Query: 181 AVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVII 240
           AV LHLK+FRQRHEKKLP I+DYFGWCTWDAFYQEVTQEGVEAGL+SL++GGT PKFVII
Sbjct: 209 AVKLHLKSFRQRHEKKLPAIIDYFGWCTWDAFYQEVTQEGVEAGLKSLSEGGTLPKFVII 268

Query: 241 DDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGL 300
           DDGWQ VGGD     +++E K QPL+RL GIKENEKF+K +DP  GIKNIV+IAK K+GL
Sbjct: 269 DDGWQSVGGD---PQEDDEDKPQPLLRLIGIKENEKFRKKDDPTVGIKNIVNIAKEKYGL 325

Query: 301 KYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVN 360
           KYVYVWHAITGYWGGVRPG+KEMEEY SLMKYP +S+GV+ENEPTW+TDV+AVQGLGL+N
Sbjct: 326 KYVYVWHAITGYWGGVRPGVKEMEEYGSLMKYPKVSEGVLENEPTWRTDVLAVQGLGLMN 385

Query: 361 PKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNF 420
           PK VYKFYNELH YLASAGIDGVKVDVQCILETLGAGLGGRVE+TRQYHQALDASVARNF
Sbjct: 386 PKAVYKFYNELHNYLASAGIDGVKVDVQCILETLGAGLGGRVEITRQYHQALDASVARNF 445

Query: 421 PDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPD 480
           PDNGCIACMSHNTDALYCSKQTA+VRASDDF+PRDP SHTIHIAAVAYNSVFLGE M+PD
Sbjct: 446 PDNGCIACMSHNTDALYCSKQTAVVRASDDFFPRDPVSHTIHIAAVAYNSVFLGEFMQPD 505

Query: 481 WDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDG------------- 527
           WDMFHSLHPAAEYH SARAISGGP+YVSD PGKH+F +LKKLVLPDG             
Sbjct: 506 WDMFHSLHPAAEYHASARAISGGPVYVSDEPGKHDFNVLKKLVLPDGSILRARLPGRPTR 565

Query: 528 -------------LLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRG 574
                        LLKIWNMNK+TGVLGVYNCQGAAWN  ERKNTFHET S+A+TG I+G
Sbjct: 566 DCLFSDPARDGISLLKIWNMNKHTGVLGVYNCQGAAWNCVERKNTFHETKSEALTGAIKG 625

Query: 575 RDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSP 634
           RDVHLIAEAATD NW GDCA+YCH+T EL T+PYNA++PVSLKVLEHEIFT+TPIK L+P
Sbjct: 626 RDVHLIAEAATDSNWNGDCAVYCHQTAELTTVPYNASLPVSLKVLEHEIFTLTPIKVLAP 685

Query: 635 GFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGG------DQRAENCSNELVG 688
           GFSFAPLGL+ M+NAGGAIEGLKY V+ G KL E+D+GY G      D+R EN S+ELVG
Sbjct: 686 GFSFAPLGLIAMYNAGGAIEGLKYEVK-GVKLVELDEGYKGENSTVSDERVENISSELVG 744

Query: 689 KVSMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDV 748
           K+ MEVKGCGKFGAY+S KPR C VDSN  EFEYDS+SGLVTF L+ L +E  ++H V+V
Sbjct: 745 KICMEVKGCGKFGAYSSTKPRMCIVDSNIAEFEYDSSSGLVTFNLDNLAEEG-RLHLVEV 803

Query: 749 AL 750
            +
Sbjct: 804 EV 805

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359484223\|ref\|XP_002285418.2\| PREDICTED: probable galactinol--sucrose galactosyltransferase 6-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224087090\|ref\|XP_002308061.1\| predicted protein [Populus trichocarpa] gi\|222854037\|gb\|EEE91584.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224142577\|ref\|XP_002324632.1\| predicted protein [Populus trichocarpa] gi\|222866066\|gb\|EEF03197.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449464974\|ref\|XP_004150204.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 6-like [Cucumis sativus] gi\|449511068\|ref\|XP_004163853.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 6-like [Cucumis sativus] gi\|375073784\|gb\|AFA34435.1\| alkaline alpha galactosidase 3 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|147865342\|emb\|CAN81947.1\| hypothetical protein VITISV_031573 [Vitis vinifera]	Back alignment and taxonomy information

>gi|334187792|ref|NP_001190347.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gi|19699067|gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gi|23308457|gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] gi|110742681|dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thaliana] gi|332005438|gb|AED92821.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi|15241300|ref|NP_197525.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gi|79328212|ref|NP_001031910.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gi|79598832|ref|NP_851044.2| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gi|269969643|sp|Q8RX87.2|RFS6_ARATH RecName: Full=Probable galactinol--sucrose galactosyltransferase 6; AltName: Full=Protein DARK INDUCIBLE 10; AltName: Full=Raffinose synthase 6 gi|222422909|dbj|BAH19441.1| AT5G20250 [Arabidopsis thaliana] gi|227204373|dbj|BAH57038.1| AT5G20250 [Arabidopsis thaliana] gi|332005435|gb|AED92818.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gi|332005436|gb|AED92819.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gi|332005437|gb|AED92820.1| putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|222424044\|dbj\|BAH19983.1\| AT5G20250 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|312281695\|dbj\|BAJ33713.1\| unnamed protein product [Thellungiella halophila]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		750
TAIR\|locus:2103488		773	SIP2 "AT3G57520" [Arabidopsis	0.684	0.663	0.601	2.1e-226
TAIR\|locus:2020452		754	SIP1 "AT1G55740" [Arabidopsis	0.682	0.679	0.560	6.8e-209
TAIR\|locus:2170528		783	SIP1 "AT5G40390" [Arabidopsis	0.670	0.642	0.405	2.2e-129
UNIPROTKB\|Q5VQG4		783	RFS "Galactinol--sucrose galac	0.670	0.642	0.412	8.5e-119
TAIR\|locus:2141425		876	STS "AT4G01970" [Arabidopsis t	0.342	0.293	0.371	5e-101
UNIPROTKB\|Q93XK2		853	STS1 "Stachyose synthase" [Pis	0.329	0.289	0.386	2.3e-97
UNIPROTKB\|G4NBB7		908	MGG_11554 "Seed imbibition pro	0.676	0.558	0.269	1.4e-35
ASPGD\|ASPL0000010056		863	aglF [Emericella nidulans (tax	0.325	0.282	0.321	1.4e-27
UNIPROTKB\|Q97U94		648	galS "Alpha-galactosidase" [Su	0.190	0.220	0.347	4.8e-20
UNIPROTKB\|Q8A170		693	BT_3797 "Possible alpha-galact	0.172	0.186	0.314	2.9e-16

TAIR\|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1712 (607.7 bits), Expect = 2.1e-226, Sum P(2) = 2.1e-226
 Identities = 313/520 (60%), Positives = 389/520 (74%)

Query:     1 MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPI 60
             MTI   + +    L+V+ +TILT +PDN+I T  + +G V G FIGA F++  S HV PI
Sbjct:     1 MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPI 60

Query:    61 GALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVY 120
             G L  +RF+ CFRFKLWWM Q+MG  G +IPLETQF+L+E+K+   +E N   +D   VY
Sbjct:    61 GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKD--EVEGN--GDDAPTVY 116

Query:   121 TVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIR 180
             TVFLPL+EG FRA LQGN  +E+E+C ESGD   + S  +H ++VHAGT+PF  I ++++
Sbjct:   117 TVFLPLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVK 176

Query:   181 AVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVII 240
             AV  H++TF  R +KKLP  +D+FGWCTWDAFY +VT EGV+ GL+SL++GGTPPKF+II
Sbjct:   177 AVERHMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLII 236

Query:   241 DDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKNEDPKT---GIKNIVDIAKTK 297
             DDGWQ +   +   N   ++  Q   RL GIKEN KFQK++   T   G+K++VD AK +
Sbjct:   237 DDGWQQIENKEKDENCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQR 296

Query:   298 HGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLG 357
             H +K VY WHA+ GYWGGV+P    ME Y+S + YP+ S GV+ N+P    D +AV GLG
Sbjct:   297 HNVKQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLG 356

Query:   358 LVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVA 417
             LVNPK V+ FYNELH YLAS GIDGVKVDVQ I+ETLGAGLGGRV LTR Y QAL+AS+A
Sbjct:   357 LVNPKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIA 416

Query:   418 RNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIM 477
             RNF DNGCI+CM HNTD LY +KQTAIVRASDDFYPRDP SHTIHIA+VAYNS+FLGE M
Sbjct:   417 RNFTDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFM 476

Query:   478 RPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFE 517
             +PDWDMFHSLHP AEYH +ARA+ G  IYVSD PG HNF+
Sbjct:   477 QPDWDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFD 516

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0034484 "raffinose catabolic process" evidence=IDA

GO:0047274 "galactinol-sucrose galactosyltransferase activity" evidence=IDA

GO:0052692 "raffinose alpha-galactosidase activity" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR\|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

TAIR\|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8RX87	RFS6_ARATH	2, ., 4, ., 1, ., 8, 2	0.7124	0.96	0.9612	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_VI000475	hydrolase, hydrolyzing O-glycosyl compounds (EC-2.4.1.82) (752 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		750
PLN02684		750	PLN02684, PLN02684, Probable galactinol--sucrose g	0.0
pfam05691		742	pfam05691, Raffinose_syn, Raffinose synthase or se	0.0
PLN02219		775	PLN02219, PLN02219, probable galactinol--sucrose g	0.0
PLN02355		758	PLN02355, PLN02355, probable galactinol--sucrose g	0.0
PLN02711		777	PLN02711, PLN02711, Probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	1e-109
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	7e-62
COG3345		687	COG3345, GalA, Alpha-galactosidase [Carbohydrate t	0.002

>gnl\|CDD\|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

 Score = 1445 bits (3743), Expect = 0.0
 Identities = 609/776 (78%), Positives = 669/776 (86%), Gaps = 52/776 (6%)

Query: 1   MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPI 60
           MTIKP VRI++ KLIVK+RTILTGVPDN+I TSGS SGPVEGVF+GA FD+E+S+HV+ +
Sbjct: 1   MTIKPAVRISDGKLIVKNRTILTGVPDNVIATSGSESGPVEGVFVGAVFDKENSKHVVSL 60

Query: 61  GALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVY 120
           G LRD+RF+ACFRFKLWWMAQKMGD G +IPLETQFLLVETK+GSH+ES+  NE+NQ VY
Sbjct: 61  GTLRDVRFMACFRFKLWWMAQKMGDMGRDIPLETQFLLVETKDGSHLESDGANEENQKVY 120

Query: 121 TVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFSHSLFVHAGTDPFGTITEAIR 180
           TVFLPLIEGSFRACLQGN NDELELCLESGD DTK SSF+HSLF+HAGTDPF TIT+AIR
Sbjct: 121 TVFLPLIEGSFRACLQGNVNDELELCLESGDVDTKRSSFTHSLFIHAGTDPFQTITDAIR 180

Query: 181 AVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVII 240
           AV LHLK+FRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGL+SLA GGTPPKFVII
Sbjct: 181 AVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVII 240

Query: 241 DDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGL 300
           DDGWQ VGGD  +    +EKK+QPL+RLTGIKENEKF+K +DP  GIKNIV+IAK KHGL
Sbjct: 241 DDGWQSVGGDP-TVEAGDEKKEQPLLRLTGIKENEKFKKKDDPNVGIKNIVNIAKEKHGL 299

Query: 301 KYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVN 360
           KYVYVWHAITGYWGGVRPG+KEMEEY S+MKYP +SKGVVEN+PTWKTDVM +QGLGLVN
Sbjct: 300 KYVYVWHAITGYWGGVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMTLQGLGLVN 359

Query: 361 PKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNF 420
           PK VYKFYNELH YLA AGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNF
Sbjct: 360 PKKVYKFYNELHSYLADAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNF 419

Query: 421 PDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPD 480
           PDNGCIACMSHNTDALYCSKQTA+VRASDDFYPRDP SHTIHIAAVAYNSVFLGE M+PD
Sbjct: 420 PDNGCIACMSHNTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEFMQPD 479

Query: 481 WDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDG------------- 527
           WDMFHSLHPAAEYH SARAISGGP+YVSDAPGKHNFELLKKLVLPDG             
Sbjct: 480 WDMFHSLHPAAEYHASARAISGGPLYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTR 539

Query: 528 -------------LLKIWNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRG 574
                        LLKIWNMNKYTGVLGVYNCQGAAW+ TERKN FH+T +D++TG IRG
Sbjct: 540 DCLFSDPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRG 599

Query: 575 RDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAAMPVSLKVLEHEIFTVTPIKFLSP 634
           RDVHLIAEAATDPNW GDCA+YCH  GELIT+PYNA++PVSLKVLEHEIFTVTPIK L+P
Sbjct: 600 RDVHLIAEAATDPNWNGDCAVYCHSRGELITMPYNASLPVSLKVLEHEIFTVTPIKHLAP 659

Query: 635 GFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDGYGGDQRAENCSNELVGKVSMEV 694
           GFSFAPLGL+NM+NAGGAIEGLKY V+                          GKV MEV
Sbjct: 660 GFSFAPLGLINMYNAGGAIEGLKYEVK-------------------------KGKVVMEV 694

Query: 695 KGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL 750
           KGCGKFGAY+S KPRRC V+SNE+ FEYDS+SGLVTF L+K+P+E K++H V+V L
Sbjct: 695 KGCGKFGAYSSVKPRRCVVESNEIAFEYDSSSGLVTFELDKMPEEGKRLHLVEVEL 750

Length = 750

>gnl\|CDD\|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1	Back alignment and domain information

>gnl\|CDD\|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

>gnl\|CDD\|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>gnl\|CDD\|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		750
PLN02219		775	probable galactinol--sucrose galactosyltransferase	100.0
PLN02684		750	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02355		758	probable galactinol--sucrose galactosyltransferase	100.0
PLN02982		865	galactinol-raffinose galactosyltransferase/ghydrol	100.0
PLN02711		777	Probable galactinol--sucrose galactosyltransferase	100.0
PF05691		747	Raffinose_syn: Raffinose synthase or seed imbibiti	100.0
PLN02692		412	alpha-galactosidase	100.0
PLN02229		427	alpha-galactosidase	100.0
PLN02808		386	alpha-galactosidase	100.0
PLN02899		633	alpha-galactosidase	100.0
PLN03231		357	putative alpha-galactosidase; Provisional	100.0
KOG2366		414	consensus Alpha-D-galactosidase (melibiase) [Carbo	99.97
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	99.94
COG3345		687	GalA Alpha-galactosidase [Carbohydrate transport a	99.9
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	99.52
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	99.28
PRK10658		665	putative alpha-glucosidase; Provisional	99.12
PRK10426		635	alpha-glucosidase; Provisional	99.0
cd06595		292	GH31_xylosidase_XylS-like This family represents a	98.99
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	98.96
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	98.95
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	98.9
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	98.86
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	98.84
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	98.77
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	98.73
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	98.7
cd06600		317	GH31_MGAM-like This family includes the following	98.65
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	98.59
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	98.44
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	98.41
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	98.41
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	98.4
PF10566		273	Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro:	98.04
KOG1065		805	consensus Maltase glucoamylase and related hydrola	97.5
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	89.39
cd06596		261	GH31_CPE1046 CPE1046 is an uncharacterized Clostri	87.95
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	86.64
KOG1066		915	consensus Glucosidase II catalytic (alpha) subunit	83.04

>PLN02219 probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

Probab=100.00  E-value=5.6e-206  Score=1729.98  Aligned_cols=743  Identities=55%  Similarity=1.011  Sum_probs=707.7

Q ss_pred             CCccceeEEeCCeEEEcCeecccCCCCCeEEeecCCCCCccceeeecccCCCCcceeeecccccCCceEEEeeecccccc
Q 039120            1 MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMA   80 (750)
Q Consensus         1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~~~r~k~~W~~   80 (750)
                      ||||+.|+|+||+|+|+|+++|++||+||++||++....+.|+|+||++++++|||+++||+++++|||||||||+|||+
T Consensus         1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt   80 (775)
T PLN02219          1 MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWWMT   80 (775)
T ss_pred             CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhccc
Confidence            99999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCccceEEEEeecCCCcccCCCCCCCCceEEEEEEEeecCceEEEEecCCCCcEEEEEecCCccccccccc
Q 039120           81 QKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACLQGNANDELELCLESGDSDTKASSFS  160 (750)
Q Consensus        81 pr~g~~~~~i~~etq~~l~e~~~~~~l~~~~~~~~~~~~y~v~Lpl~~g~~ra~l~~~~~~~l~i~~~sg~~~v~~~~~~  160 (750)
                      ||+|++++|||.||||+|+|.++...   +++.+.+++.|+|||||++|.|||+||++++++|+||+|||++.++++++.
T Consensus        81 ~~~G~~g~dip~eTQ~~l~e~~~~~~---~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~  157 (775)
T PLN02219         81 QRMGSCGKDIPLETQFMLLESKDEVE---GGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGL  157 (775)
T ss_pred             hhhccCCCcCCcceEEEEEEcCCCcc---ccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccc
Confidence            99999999999999999999986221   011123456799999999999999999999999999999999999999999


Q ss_pred             eEEEEEecCCchhHHHHHHHHHHhhhcccccccccCCCCccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEE
Q 039120          161 HSLFVHAGTDPFGTITEAIRAVNLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTPPKFVII  240 (750)
Q Consensus       161 ~~v~v~~g~dp~~~i~~a~~~v~~~~~tf~~~~~k~~P~~~d~~GWcTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~viI  240 (750)
                      ..|||++|+|||++|++|++++++|+++|++|++|++|+++|+|||||||+||++|||++|++++++|+++|+|++||||
T Consensus       158 ~~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viI  237 (775)
T PLN02219        158 HLVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLII  237 (775)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCCCCCCCCccccccccccccccCCcccccCCCC---CCCCCCHHHHHHHHHHhCCCeEEeeeecccCccCccc
Q 039120          241 DDGWQLVGGDDHSSNDENEKKQQPLMRLTGIKENEKFQKN---EDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVR  317 (750)
Q Consensus       241 DDGWQ~~~~d~~~~~~~~~~~~~~~~~l~~~~~n~KFP~~---~~~~~GLk~lv~~ik~~~Gik~vgvWhal~GYWgGI~  317 (750)
                      |||||++.+++++.++.+++|+||++||++|++|.||+..   ++++.|||++|+.||+++|||||||||||+||||||+
T Consensus       238 DDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~  317 (775)
T PLN02219        238 DDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVK  317 (775)
T ss_pred             ccCccccccccccccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcC
Confidence            9999999988777788899999999999999999999842   3577899999999999999999999999999999999


Q ss_pred             CCchhhhhhhhhccccCCCCCcccCCCCceecccccccCCCCChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCC
Q 039120          318 PGIKEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAG  397 (750)
Q Consensus       318 P~~~~~~~y~~~~~~~~~spg~~~~~pd~~~~~~~~~G~~l~~p~~a~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~  397 (750)
                      |+++++++|++++++|+.+||..+++||++++++..+|+++++|+++++|||+||+||+++||||||||+|+.+++++.+
T Consensus       318 P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~  397 (775)
T PLN02219        318 PAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAG  397 (775)
T ss_pred             CCCcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChhHHHHHHHHHHHHHHHhcCCCCceeeecCCCCCccccccccCeEeccCccCCCCCCchhHHHHHHhhhhhhccCCC
Q 039120          398 LGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIM  477 (750)
Q Consensus       398 ~~gr~~~~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~Nsl~~g~~~  477 (750)
                      +++|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||||+++
T Consensus       398 ~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v  477 (775)
T PLN02219        398 HGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFM  477 (775)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCChhhHHHHHHhhhcCCceeecCCCCCCCHHHHhhhcCCCC--------------------------ceeE
Q 039120          478 RPDWDMFHSLHPAAEYHGSARAISGGPIYVSDAPGKHNFELLKKLVLPDG--------------------------LLKI  531 (750)
Q Consensus       478 ~pD~DMf~s~h~~a~~HaaaraisGgPlyisD~pg~hd~~lL~~lv~pdG--------------------------~LkI  531 (750)
                      |||||||||.||+|+|||++||||||||||||+||+||++|||+||+|||                          +|||
T Consensus       478 ~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKI  557 (775)
T PLN02219        478 QPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKI  557 (775)
T ss_pred             ccCchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEE
Confidence            99999999999999999999999999999999999999999999999999                          7999


Q ss_pred             EEecccceEEEEEecCCCcccccccccccccccccceEeeeeccccchhhhhcCCCCCCCcEEEEEeecCeEEecCCCCc
Q 039120          532 WNMNKYTGVLGVYNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGELITLPYNAA  611 (750)
Q Consensus       532 w~~n~~~gvvgvFN~~g~~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~g~~~vy~~~sg~~~~l~~~~~  611 (750)
                      ||+|+++||||+|||||++||++++++++|+++|.++|+.|++.||+++.++++. +|+++|+||+|++|+++++++++.
T Consensus       558 wn~n~~~gviG~FNcqGagW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~-~w~~~~~vy~~~sg~l~~l~~~~~  636 (775)
T PLN02219        558 WNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGE-DWSGDSVVYAYKSGEVVRLPKGAS  636 (775)
T ss_pred             EEcccccceEEEEeccCCCCCchhhccccccCCCcceEEEEcchhccchhhcccc-CcCCCEEEEEeccCeEEEcCCCCc
Confidence            9999999999999999999999999999999999999999999999999887765 799999999999999999999999


Q ss_pred             eeEEecCCcEEEEEEeeeeecCCCceEEEeeehhhhcCCcceeeeEEEEecCcccccccCC-CCCCCccccCCCCceeEE
Q 039120          612 MPVSLKVLEHEIFTVTPIKFLSPGFSFAPLGLVNMFNAGGAIEGLKYVVEGGAKLTEIDDG-YGGDQRAENCSNELVGKV  690 (750)
Q Consensus       612 ~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~~~~~~~AV~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v  690 (750)
                      ++|+|++.+|||||++||+.+..+++||||||+||||+||||++++|....+.+.++++++ ++++++.++.+......|
T Consensus       637 ~~vtL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  716 (775)
T PLN02219        637 IPVTLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATI  716 (775)
T ss_pred             eEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCCCceE
Confidence            9999999999999999999999999999999999999999999999986666666666655 577788888777777789


Q ss_pred             EEEEEeeeeEEEEecCCCceeeeCCeeeeeEEeCCCcEEEEeccCCCccCCceEEEEeeC
Q 039120          691 SMEVKGCGKFGAYASAKPRRCTVDSNEVEFEYDSNSGLVTFGLEKLPDEDKKVHFVDVAL  750 (750)
Q Consensus       691 ~~~vkg~G~fg~YsS~~P~~~~vdg~~~~f~y~~~~gll~~~l~~~~~~~~~~~~~~~~~  750 (750)
                      +|+|||||+||+|||++|++|.|||+||+|+|++++|+|+|+|| .|++  ++|+|.|||
T Consensus       717 ~~~v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~-~~~~--~~~~~~v~~  773 (775)
T PLN02219        717 ALSVRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLP-VTEE--EMYRWHVEI  773 (775)
T ss_pred             EEEEEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEcc-CCcc--cCceeeEEE
Confidence            99999999999999999999999999999999999999999999 4666  689999986

>PLN02684 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02355 probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PLN02711 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins	Back alignment and domain information

>PLN02692 alpha-galactosidase	Back alignment and domain information

>PLN02229 alpha-galactosidase	Back alignment and domain information

>PLN02808 alpha-galactosidase	Back alignment and domain information

>PLN02899 alpha-galactosidase	Back alignment and domain information

>PLN03231 putative alpha-galactosidase; Provisional	Back alignment and domain information

>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		750
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	2e-10
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	3e-07
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	6e-07
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	1e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	5e-06
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	1e-05
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	1e-04
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	7e-04
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	7e-04

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433	Back alignment and structure

 Score = 62.9 bits (152), Expect = 2e-10
 Identities = 56/328 (17%), Positives = 97/328 (29%), Gaps = 46/328 (14%)

Query: 205 GWCTWDAFYQEVTQEGVEAGLESLAKGGTPP--KFVIIDDGWQLVGGDDHSSNDENEKKQ 262
           GW +WD +   VT+E V    E +A        +++++D  W     +  + N       
Sbjct: 15  GWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCM 74

Query: 263 QPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGLKY-VYVWHAITGYWGGVRPGIK 321
               RL  +    +F  +     G K + D      GLK+ +++   I          + 
Sbjct: 75  DEYGRL--LPATNRFP-SAKNGAGFKPLSDAIHDL-GLKFGIHIMRGIPRQAVYENSPVL 130

Query: 322 EMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKN-VYKFYNELHGYLASAGI 380
              +    + +         +   W TD       G+   K     +YN L    A  G+
Sbjct: 131 GSTKTAREIAHT-------NSICPWNTD-----MYGVDPTKEGAQSYYNSLFELYAQWGV 178

Query: 381 DGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSK 440
           D VKVD       L       +   +   +A+ A   R    +      +    A +   
Sbjct: 179 DFVKVD-DIAASRLYDTHLEEI---KMIQRAIQAC-GRPMVLSLS-PGPAPIKYAHHFKT 232

Query: 441 QTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLHP----------- 489
              + R +DDF+    +               +G    PD  M    H            
Sbjct: 233 NANMWRITDDFWDDW-SLLYQMFERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGD 291

Query: 490 ------AAEY--HGSARAISGGPIYVSD 509
                   E     +  AI   P+    
Sbjct: 292 RWTRFTKDEQLTMMNLWAICHSPLMFGG 319

PyMOL of 3cc1

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732	Back alignment and structure

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		750
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	100.0
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	100.0
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	100.0
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	100.0
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	100.0
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	100.0
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	100.0
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	100.0
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	100.0
4fnq_A		729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	99.96
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	99.95
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	99.93
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	99.93
2f2h_A		773	Putative family 31 glucosidase YICI; BETA8alpha8 b	99.46
2g3m_A		693	Maltase, alpha-glucosidase; hydrolase, glycoside h	99.28
4ba0_A		817	Alpha-glucosidase, putative, ADG31B; hydrolase; HE	99.26
3lpp_A		898	Sucrase-isomaltase; glycoside hydrolase family 31,	99.13
2xvl_A		1020	Alpha-xylosidase, putative, XYL31A; hydrolase, gly	99.13
3nsx_A		666	Alpha-glucosidase; structural genomics, PSI-2, pro	99.1
3l4y_A		875	Maltase-glucoamylase, intestinal; glycoside hydrol	99.1
3a24_A		641	Alpha-galactosidase; glycoside hydrolase family 97	98.79
3top_A		908	Maltase-glucoamylase, intestinal; membrane, hydrol	98.34
2x2h_A		1027	Alpha-1,4-glucan lyase isozyme 1; anhydrofructose	97.68
2d73_A		738	Alpha-glucosidase SUSB; glycoside hydrolase family	97.42
3zss_A		695	Putative glucanohydrolase PEP1A; alpha-glucan bios	85.69
3k1d_A		722	1,4-alpha-glucan-branching enzyme; mycobacterium t	84.3

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=3.7e-48  Score=433.79  Aligned_cols=373  Identities=17%  Similarity=0.197  Sum_probs=258.9

Q ss_pred             ccCCCCccccccccccccccccCCHHHHHHHHHHHHhCCCC--CcEEEEecCccccCCCCCCCCccccccccccccccCC
Q 039120          194 EKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGTP--PKFVIIDDGWQLVGGDDHSSNDENEKKQQPLMRLTGI  271 (750)
Q Consensus       194 ~k~~P~~~d~~GWcTWdaf~~~vte~~I~~~l~~L~~~Gi~--~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~l~~~  271 (750)
                      .+++|     ||||||++||++|||++|++.++.|+++..+  ++||+||||||...++..+-... .  ..-...+.+|
T Consensus         9 ~~~pp-----~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~-~--~~~~d~~G~~   80 (433)
T 3cc1_A            9 ALTPP-----MGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSSAYNPF-A--PLCMDEYGRL   80 (433)
T ss_dssp             TBCCC-----EEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCCEEEECSCTTCCCTTSTTCCTT-S--CSCBCTTSCB
T ss_pred             CCCCC-----EEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCeEEEECCCcCCCCCcccccccc-c--ccccCCCCCE
Confidence            46788     9999999999999999999999999333322  35999999999875431100000 0  0000135566


Q ss_pred             c-ccccCCCCCCCCCCHHHHHHHHHHhCCCeEEeeeecccCccCcccCCchhhhhhhhh-----ccccCCCCCcccCCCC
Q 039120          272 K-ENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESL-----MKYPMLSKGVVENEPT  345 (750)
Q Consensus       272 ~-~n~KFP~~~~~~~GLk~lv~~ik~~~Gik~vgvWhal~GYWgGI~P~~~~~~~y~~~-----~~~~~~spg~~~~~pd  345 (750)
                      . +++|||+. ..+.|||+++++||+ +|+| +|||+.+.-.+..+.|+++.   |.+.     +..+...   ....+.
T Consensus        81 ~~~~~kFP~~-~~~~Gl~~l~~~ih~-~Glk-~Giw~~p~i~~~~v~~~s~~---~~~~~~~~di~~~~~~---~~~~~~  151 (433)
T 3cc1_A           81 LPATNRFPSA-KNGAGFKPLSDAIHD-LGLK-FGIHIMRGIPRQAVYENSPV---LGSTKTAREIAHTNSI---CPWNTD  151 (433)
T ss_dssp             CCCTTTCGGG-TTTTTTHHHHHHHHH-TTCE-EEEEEESSEEHHHHHHTCBC---TTSSCBHHHHEETTCC---BTTBTT
T ss_pred             eECCccCCCc-ccCCCHHHHHHHHHH-cCCe-eEEEeCCCCchhccCCCCcc---ccccceecccccCCcc---cCCCCC
Confidence            5 56899931 112399999999999 6999 99998763111123444332   1110     0000000   000111


Q ss_pred             ceecccccccCCCCChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCChhHHHHHHHHHHHHHHHhcCCCCce
Q 039120          346 WKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGC  425 (750)
Q Consensus       346 ~~~~~~~~~G~~l~~p~~a~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~gr~~~~~ay~~AL~~s~~~~f~g~~i  425 (750)
                             ..++++.+|+ ++.||+.++++|++|||||||+|+|+.. .+. ++  ..+..++|++||+++      +++|
T Consensus       152 -------~~~lD~~~p~-~~~~~~~~~~~l~~~GvDyvK~D~~~~~-~~~-~~--~~~~~~~~~~aL~~~------gr~i  213 (433)
T 3cc1_A          152 -------MYGVDPTKEG-AQSYYNSLFELYAQWGVDFVKVDDIAAS-RLY-DT--HLEEIKMIQRAIQAC------GRPM  213 (433)
T ss_dssp             -------EEEECTTSTT-HHHHHHHHHHHHHHTTCCEEEEESCSCT-TSS-CC--CHHHHHHHHHHHHHS------SSCC
T ss_pred             -------ceeecCCCHH-HHHHHHHHHHHHHHcCCCEEEeCCcccc-cCC-cc--cHHHHHHHHHHHHhc------CCCE
Confidence                   1245666665 8999999999999999999999999862 221 12  346677888888763      7899


Q ss_pred             eeecCCCCCc----cccccccCeEeccCccCCCCCCchhHHHHHHhhhhhhccCCCCCCCccCCCCC-------------
Q 039120          426 IACMSHNTDA----LYCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLH-------------  488 (750)
Q Consensus       426 I~cMs~~~~~----l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~Nsl~~g~~~~pD~DMf~s~h-------------  488 (750)
                      +.|+|+++..    .+..+.+++||+|+|++|+|++...+ +..+++.+.++++++|||||||+++|             
T Consensus       214 ~~slc~g~~~~~~~~~~~~~~n~wR~s~D~~~~w~~~~~~-~~~~~~~~~~~~~g~~nD~Dml~vg~~g~~~~~~~~~~~  292 (433)
T 3cc1_A          214 VLSLSPGPAPIKYAHHFKTNANMWRITDDFWDDWSLLYQM-FERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGDR  292 (433)
T ss_dssp             EEECCCSBSSEESCSSSCCTTGGGCCEECCCSCHHHHHHH-HHHHHHHHHSCCCSCCCBCCCBCCSEECTTCSSSSSSSE
T ss_pred             EEEecCCCCChhhhhhhhhhCcEEEeccCccccHHHHHHH-HHHHHHHHhhcCCCccCChHHhcccCccccccccccccc
Confidence            9999986322    23457899999999999999875432 22345667788999999999999885             


Q ss_pred             ------hhhHHHHHHhhhcCCceeecCCCCCCCH---HHHh--------------hhcCCCCceeEEEe--cccceEEEE
Q 039120          489 ------PAAEYHGSARAISGGPIYVSDAPGKHNF---ELLK--------------KLVLPDGLLKIWNM--NKYTGVLGV  543 (750)
Q Consensus       489 ------~~a~~HaaaraisGgPlyisD~pg~hd~---~lL~--------------~lv~pdG~LkIw~~--n~~~gvvgv  543 (750)
                            .+.++|+++|||+++||++||++.+.+-   ++|+              +.|.++|.+.||..  .+++.+|++
T Consensus       293 ~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~~v~~~~~~~vw~~~l~~g~~~val  372 (433)
T 3cc1_A          293 WTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNRFVYREEDKVAWAANGRNGEAYVAL  372 (433)
T ss_dssp             ECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEEEEEEETTEEEEEEECSSSCEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCceeeEecCCcEEEEEECCCCCEEEEE
Confidence                  4578899999999999999999988663   3442              12334556788976  467789999


Q ss_pred             EecCCCcccccccccccccccccceEeeeeccccchhhhhcCCCCCCCcEEEEEeecCeE-EecCCCCceeEEecCCcEE
Q 039120          544 YNCQGAAWNKTERKNTFHETTSDAITGQIRGRDVHLIAEAATDPNWTGDCAIYCHRTGEL-ITLPYNAAMPVSLKVLEHE  622 (750)
Q Consensus       544 FN~~g~~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~g~~~vy~~~sg~~-~~l~~~~~~~v~L~~~~~e  622 (750)
                      ||.++..                 .+.++++++++.          .+.|.|++.++++. +....+..++++|++|++.
T Consensus       373 ~N~~~~~-----------------~~~~~~~~~lgl----------~~~~~v~Dlw~~~~~g~~~~~~~~~~~v~~hg~~  425 (433)
T 3cc1_A          373 FNLHDQQ-----------------KTLQFRLDMVGI----------METVQLFNVWDRSFLQSLAPSESFQIELKPHQSM  425 (433)
T ss_dssp             EECSSSC-----------------EEEEECGGGTTC----------CSCEEEEETTTTEEEEEECTTCCEEEEECTTCEE
T ss_pred             EeCCCCC-----------------EEEEEEHHHcCC----------CCceEEEECCCCCccccccCCceEEEEECCCcEE
Confidence            9987543                 333467777762          34789999999874 3443234899999999999


Q ss_pred             EEEEeee
Q 039120          623 IFTVTPI  629 (750)
Q Consensus       623 i~t~~Pv  629 (750)
                      ||.+.|.
T Consensus       426 l~~l~~~  432 (433)
T 3cc1_A          426 MLKLSPD  432 (433)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            9999985

PyMOL of 3cc1

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*	Back alignment and structure

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*	Back alignment and structure

>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*	Back alignment and structure

>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*	Back alignment and structure

>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*	Back alignment and structure

>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*	Back alignment and structure

>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*	Back alignment and structure

>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*	Back alignment and structure

>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*	Back alignment and structure

>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*	Back alignment and structure

>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*	Back alignment and structure

>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*	Back alignment and structure

>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*	Back alignment and structure

>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		750
d1szna2		314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	6e-19
d1zy9a2		348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	3e-15
d1uasa2		273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	6e-11
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	4e-10
d1ktba2		293	c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu	6e-05

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 86.1 bits (212), Expect = 6e-19
 Identities = 49/321 (15%), Positives = 85/321 (26%), Gaps = 60/321 (18%)

Query: 204 FGWCTWDAFYQEVTQEGVEAGLESLAKGGTPP---KFVIIDDGWQLVGGDDHSSNDENEK 260
            GW +W+A++ ++ +    +  E +   G       +V IDD W +  G        N  
Sbjct: 14  LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNAT 73

Query: 261 KQQPLMRLTGIKENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGI 320
           +                        GI  +        GLK    +           P  
Sbjct: 74  RFP---------------------DGIDGLAK-KVHALGLKLGI-YSTAGTATCAGYPA- 109

Query: 321 KEMEEYESLMKYPMLSKGVVENEPTWKTDVMAVQGLGLVNPKNVYKFYNELHGYLASAGI 380
                  SL                      A  G+  +   N     ++      +   
Sbjct: 110 -------SLGYED------------VDAADFADWGVDYLKYDNCN-VPSDWQDEYVACNP 149

Query: 381 DGVKVDVQCILETLG------AGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTD 434
           D VK        T         G       + +   A+  ++A+   +     C+    D
Sbjct: 150 DFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMCIWGQAD 209

Query: 435 ALYCSKQTAI-VRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFH----SLHP 489
                  T I  R SDD  P   +   I +   ++    +      D DM      +L  
Sbjct: 210 VFSWGNSTGISWRMSDDISPNWGSVTRI-LNLNSFKLNSVDFWGHNDADMLEVGNGNLTA 268

Query: 490 AAEY-HGSARAISGGPIYVSD 509
           A    H +  A    P+ +  
Sbjct: 269 AETRTHFALWAAMKSPLLIGT 289

PyMOL of d1szna2

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348	Back information, alignment and structure

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		750
d1szna2		314	Melibiase {Trichoderma reesei [TaxId: 51453]}	100.0
d1uasa2		273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	100.0
d1r46a2		292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1zy9a2		348	Alpha-galactosidase GalA catalytic domain {Thermot	100.0
d1ktba2		293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	100.0
d2f2ha4		338	Putative glucosidase YicI, domain 2 {Escherichia c	99.33
d1uasa1		89	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	97.66
d1ktba1		95	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	97.18
d1szna1		103	Melibiase {Trichoderma reesei [TaxId: 51453]}	96.83
d1r46a1		98	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	96.67
d1g5aa2		554	Amylosucrase {Neisseria polysaccharea [TaxId: 489]	88.57
d1gcya2		357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	86.01
d1ht6a2		347	Plant alpha-amylase {Barley (Hordeum vulgare), AMY	80.5

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=1.7e-39  Score=343.46  Aligned_cols=273  Identities=16%  Similarity=0.190  Sum_probs=203.8

Q ss_pred             ccCCCCccccccccccccccccCCHHHHHHHHHHHHhCCC---CCcEEEEecCccccCCCCCCCCccccccccccccccC
Q 039120          194 EKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLESLAKGGT---PPKFVIIDDGWQLVGGDDHSSNDENEKKQQPLMRLTG  270 (750)
Q Consensus       194 ~k~~P~~~d~~GWcTWdaf~~~vte~~I~~~l~~L~~~Gi---~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~l~~  270 (750)
                      .+++|     ||||||++||++|||++|++.++.|++.|+   ++++|+||||||...++.                +.+
T Consensus         9 ~~~Pp-----~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~----------------~G~   67 (314)
T d1szna2           9 GKVPS-----LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV----------------DGH   67 (314)
T ss_dssp             TTSCC-----EEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB----------------TTB
T ss_pred             CCCCC-----CcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC----------------CCC
Confidence            35667     999999999999999999999999999885   468999999999876552                234


Q ss_pred             Cc-ccccCCCCCCCCCCHHHHHHHHHHhCCCeEEeeeecccCccCcccCCchhhhhhhhhccccCCCCCcccCCCCceec
Q 039120          271 IK-ENEKFQKNEDPKTGIKNIVDIAKTKHGLKYVYVWHAITGYWGGVRPGIKEMEEYESLMKYPMLSKGVVENEPTWKTD  349 (750)
Q Consensus       271 ~~-~n~KFP~~~~~~~GLk~lv~~ik~~~Gik~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~~~~spg~~~~~pd~~~~  349 (750)
                      |. +++|||      +|||+++++||+ .|+| +|+|+++..+|...+|+....+.......                  
T Consensus        68 ~~~d~~kFP------~Gl~~~~~~i~~-~G~k-~Giw~~p~~~~~~~~p~~~~~~~~~~~~~------------------  121 (314)
T d1szna2          68 IAPNATRFP------DGIDGLAKKVHA-LGLK-LGIYSTAGTATCAGYPASLGYEDVDAADF------------------  121 (314)
T ss_dssp             CCBCTTTCT------THHHHHHHHHHH-TTCE-EEEEEESSSBCTTSCBCCTTCHHHHHHHH------------------
T ss_pred             eeeCHhhcC------CchHHHHHHHHh-cCCe-EEEeecccccccCCCcccccccccchhhh------------------
Confidence            55 668999      799999999999 7999 89999999988887787643111111100                  


Q ss_pred             ccccccCCCCChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccC------CCCChhHHHHHHHHHHHHHHHhcCCCC
Q 039120          350 VMAVQGLGLVNPKNVYKFYNELHGYLASAGIDGVKVDVQCILETLGA------GLGGRVELTRQYHQALDASVARNFPDN  423 (750)
Q Consensus       350 ~~~~~G~~l~~p~~a~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~------~~~gr~~~~~ay~~AL~~s~~~~f~g~  423 (750)
                        ...|+++.+| +++.+++.++..++++||||+|+|.+........      .+..........+.++.+++++.+++.
T Consensus       122 --~~~~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  198 (314)
T d1szna2         122 --ADWGVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEI  198 (314)
T ss_dssp             --HHTTCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCC
T ss_pred             --hhcCCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCCe
Confidence              0012223333 3455667777778999999999999876433211      111112223334445666688887777


Q ss_pred             ceeeecCCCCCcc-ccccccCeEeccCccCCCCCCchhHHHHHHhhhhhhccCCCCCCCccCCCCC-----hhhHHHHHH
Q 039120          424 GCIACMSHNTDAL-YCSKQTAIVRASDDFYPRDPTSHTIHIAAVAYNSVFLGEIMRPDWDMFHSLH-----PAAEYHGSA  497 (750)
Q Consensus       424 ~iI~cMs~~~~~l-~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~Nsl~~g~~~~pD~DMf~s~h-----~~a~~Haaa  497 (750)
                      .+..|+++..... +....++++|+|+|++|.|...+. ++..++++..+.++..||||||++.++     .+.++|+++
T Consensus       199 ~i~~c~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~-~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl  277 (314)
T d1szna2         199 VLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTR-ILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFAL  277 (314)
T ss_dssp             EEEECCTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHH-HHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHH
T ss_pred             EEEecCCCCCCchhhhhhcccceeecCCcccccchHHH-HHHHHHHHHHHhcCCccCCchhcccCCCCCCHHHHHHHHHH
Confidence            7888888765432 445778999999999999987654 567788999889999999999998765     357899999


Q ss_pred             hhhcCCceeecCCCCCCCHH
Q 039120          498 RAISGGPIYVSDAPGKHNFE  517 (750)
Q Consensus       498 raisGgPlyisD~pg~hd~~  517 (750)
                      |||+|+||++||++.+.+-+
T Consensus       278 ~a~~~~pl~~g~dl~~~~~~  297 (314)
T d1szna2         278 WAAMKSPLLIGTDLAQLSQN  297 (314)
T ss_dssp             HHHTTCCEEECSCGGGCCHH
T ss_pred             HHHHhCchhccCCcccCCHH
Confidence            99999999999998876643

PyMOL of d1szna2

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}	Back information, alignment and structure

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}	Back information, alignment and structure

>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}	Back information, alignment and structure